HEADER CALCIUM BINDING PROTEIN 02-AUG-14 4U8D TITLE X-RAY STRUCTURE OF MG-BOUND HUMAN SORCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORCIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 22 KDA PROTEIN,CP-22,CP22,V19; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SRI; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CALCIUM BINDING PROTEIN, PENTA EF-HAND, MULTIDRUG RESISTANCE RELATED KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.FIORILLO,A.ILARI,G.COLOTTI REVDAT 3 20-DEC-23 4U8D 1 LINK REVDAT 2 02-SEP-15 4U8D 1 REVDAT 1 26-AUG-15 4U8D 0 JRNL AUTH A.ILARI,A.FIORILLO,G.COLOTTI JRNL TITL INVESTIGATING THE CONFORMATIONAL CHANGES OF SORCIN TO SHED JRNL TITL 2 LIGHT ON SIGNAL TRANSDUCTION IN THE APOPTOTIC PROCESS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 27703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1390 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1904 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2704 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 166 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.50000 REMARK 3 B22 (A**2) : -1.50000 REMARK 3 B33 (A**2) : 3.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.205 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.193 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.049 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2795 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2561 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3759 ; 1.458 ; 1.945 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5868 ; 0.847 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 5.314 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;38.496 ;24.126 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 462 ;16.438 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;19.104 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 403 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3251 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 691 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1380 ; 2.978 ; 4.211 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1379 ; 2.975 ; 4.210 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1723 ; 4.677 ; 6.305 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 161 A 198 3 REMARK 3 1 B 161 B 198 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 367 ; 1.090 ; 5.000 REMARK 3 TIGHT THERMAL 1 A (A**2): 226 ; 1.890 ; 0.500 REMARK 3 LOOSE THERMAL 1 A (A**2): 367 ; 4.900 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4U8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202977. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JANUARY 10, 2014, XSCALE REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.2.8, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27800 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 0.93800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4UPG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000 10%, MG(OAC)2 0.2M, REMARK 280 CACODYLATE 0.1M PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.44000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 58.91600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 58.91600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.16000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 58.91600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 58.91600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 21.72000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 58.91600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.91600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.16000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 58.91600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.91600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 21.72000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 43.44000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 TYR A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 HIS A 6 REMARK 465 PRO A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 GLY A 12 REMARK 465 TYR A 13 REMARK 465 TYR A 14 REMARK 465 PRO A 15 REMARK 465 GLY A 16 REMARK 465 GLY A 17 REMARK 465 TYR A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 ALA A 21 REMARK 465 PRO A 22 REMARK 465 GLY A 23 REMARK 465 GLY A 24 REMARK 465 PRO A 25 REMARK 465 ALA A 26 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 TYR B 3 REMARK 465 PRO B 4 REMARK 465 GLY B 5 REMARK 465 HIS B 6 REMARK 465 PRO B 7 REMARK 465 GLY B 8 REMARK 465 ALA B 9 REMARK 465 GLY B 10 REMARK 465 GLY B 11 REMARK 465 GLY B 12 REMARK 465 TYR B 13 REMARK 465 TYR B 14 REMARK 465 PRO B 15 REMARK 465 GLY B 16 REMARK 465 GLY B 17 REMARK 465 TYR B 18 REMARK 465 GLY B 19 REMARK 465 GLY B 20 REMARK 465 ALA B 21 REMARK 465 PRO B 22 REMARK 465 GLY B 23 REMARK 465 GLY B 24 REMARK 465 PRO B 25 REMARK 465 ALA B 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 27 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 27 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 116 18.66 59.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 83 OD1 REMARK 620 2 ASP A 85 OD1 84.6 REMARK 620 3 SER A 87 OG 93.4 88.5 REMARK 620 4 THR A 89 O 96.2 175.6 87.1 REMARK 620 5 HOH A 343 O 97.1 95.2 169.2 89.0 REMARK 620 6 HOH A 353 O 172.2 89.1 91.0 90.5 78.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 113 OD1 REMARK 620 2 ASP A 115 OD1 120.3 REMARK 620 3 SER A 117 OG 79.6 109.5 REMARK 620 4 THR A 119 O 76.5 163.2 70.5 REMARK 620 5 HOH A 366 O 128.6 67.5 150.2 103.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 203 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 331 O REMARK 620 2 THR B 31 OG1 122.0 REMARK 620 3 GLN B 32 O 115.2 115.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 33 O REMARK 620 2 SER B 61 O 87.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 83 OD1 REMARK 620 2 ASP B 85 OD1 83.7 REMARK 620 3 SER B 87 OG 88.3 94.8 REMARK 620 4 THR B 89 O 95.4 177.7 83.0 REMARK 620 5 HOH B 333 O 173.3 90.1 94.8 90.9 REMARK 620 6 HOH B 341 O 101.4 96.8 165.5 85.4 76.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 204 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 360 O REMARK 620 2 HOH B 361 O 83.0 REMARK 620 3 HOH B 362 O 75.8 78.6 REMARK 620 4 HOH B 363 O 160.8 84.8 87.3 REMARK 620 5 HOH B 364 O 66.2 139.5 69.0 116.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UPG RELATED DB: PDB REMARK 900 RELATED ID: 4USL RELATED DB: PDB DBREF 4U8D A 1 198 UNP P30626 SORCN_HUMAN 1 198 DBREF 4U8D B 1 198 UNP P30626 SORCN_HUMAN 1 198 SEQRES 1 A 198 MET ALA TYR PRO GLY HIS PRO GLY ALA GLY GLY GLY TYR SEQRES 2 A 198 TYR PRO GLY GLY TYR GLY GLY ALA PRO GLY GLY PRO ALA SEQRES 3 A 198 PHE PRO GLY GLN THR GLN ASP PRO LEU TYR GLY TYR PHE SEQRES 4 A 198 ALA ALA VAL ALA GLY GLN ASP GLY GLN ILE ASP ALA ASP SEQRES 5 A 198 GLU LEU GLN ARG CYS LEU THR GLN SER GLY ILE ALA GLY SEQRES 6 A 198 GLY TYR LYS PRO PHE ASN LEU GLU THR CYS ARG LEU MET SEQRES 7 A 198 VAL SER MET LEU ASP ARG ASP MET SER GLY THR MET GLY SEQRES 8 A 198 PHE ASN GLU PHE LYS GLU LEU TRP ALA VAL LEU ASN GLY SEQRES 9 A 198 TRP ARG GLN HIS PHE ILE SER PHE ASP THR ASP ARG SER SEQRES 10 A 198 GLY THR VAL ASP PRO GLN GLU LEU GLN LYS ALA LEU THR SEQRES 11 A 198 THR MET GLY PHE ARG LEU SER PRO GLN ALA VAL ASN SER SEQRES 12 A 198 ILE ALA LYS ARG TYR SER THR ASN GLY LYS ILE THR PHE SEQRES 13 A 198 ASP ASP TYR ILE ALA CYS CYS VAL LYS LEU ARG ALA LEU SEQRES 14 A 198 THR ASP SER PHE ARG ARG ARG ASP THR ALA GLN GLN GLY SEQRES 15 A 198 VAL VAL ASN PHE PRO TYR ASP ASP PHE ILE GLN CYS VAL SEQRES 16 A 198 MET SER VAL SEQRES 1 B 198 MET ALA TYR PRO GLY HIS PRO GLY ALA GLY GLY GLY TYR SEQRES 2 B 198 TYR PRO GLY GLY TYR GLY GLY ALA PRO GLY GLY PRO ALA SEQRES 3 B 198 PHE PRO GLY GLN THR GLN ASP PRO LEU TYR GLY TYR PHE SEQRES 4 B 198 ALA ALA VAL ALA GLY GLN ASP GLY GLN ILE ASP ALA ASP SEQRES 5 B 198 GLU LEU GLN ARG CYS LEU THR GLN SER GLY ILE ALA GLY SEQRES 6 B 198 GLY TYR LYS PRO PHE ASN LEU GLU THR CYS ARG LEU MET SEQRES 7 B 198 VAL SER MET LEU ASP ARG ASP MET SER GLY THR MET GLY SEQRES 8 B 198 PHE ASN GLU PHE LYS GLU LEU TRP ALA VAL LEU ASN GLY SEQRES 9 B 198 TRP ARG GLN HIS PHE ILE SER PHE ASP THR ASP ARG SER SEQRES 10 B 198 GLY THR VAL ASP PRO GLN GLU LEU GLN LYS ALA LEU THR SEQRES 11 B 198 THR MET GLY PHE ARG LEU SER PRO GLN ALA VAL ASN SER SEQRES 12 B 198 ILE ALA LYS ARG TYR SER THR ASN GLY LYS ILE THR PHE SEQRES 13 B 198 ASP ASP TYR ILE ALA CYS CYS VAL LYS LEU ARG ALA LEU SEQRES 14 B 198 THR ASP SER PHE ARG ARG ARG ASP THR ALA GLN GLN GLY SEQRES 15 B 198 VAL VAL ASN PHE PRO TYR ASP ASP PHE ILE GLN CYS VAL SEQRES 16 B 198 MET SER VAL HET MG A 201 1 HET MG A 202 1 HET MG B 201 1 HET MG B 202 1 HET MG B 203 1 HET MG B 204 1 HET MG B 205 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 7(MG 2+) FORMUL 10 HOH *166(H2 O) HELIX 1 AA1 LEU A 35 ALA A 43 1 9 HELIX 2 AA2 ASP A 50 SER A 61 1 12 HELIX 3 AA3 ASN A 71 ASP A 83 1 13 HELIX 4 AA4 GLY A 91 ASP A 113 1 23 HELIX 5 AA5 ASP A 121 MET A 132 1 12 HELIX 6 AA6 SER A 137 SER A 149 1 13 HELIX 7 AA7 PHE A 156 ARG A 175 1 20 HELIX 8 AA8 TYR A 188 SER A 197 1 10 HELIX 9 AA9 LEU B 35 ALA B 41 1 7 HELIX 10 AB1 ASP B 50 GLY B 62 1 13 HELIX 11 AB2 ASN B 71 ASP B 83 1 13 HELIX 12 AB3 GLY B 91 ASP B 113 1 23 HELIX 13 AB4 ASP B 121 GLY B 133 1 13 HELIX 14 AB5 SER B 137 SER B 149 1 13 HELIX 15 AB6 PHE B 156 ASP B 177 1 22 HELIX 16 AB7 TYR B 188 SER B 197 1 10 SHEET 1 AA1 2 THR A 119 VAL A 120 0 SHEET 2 AA1 2 ILE A 154 THR A 155 -1 O ILE A 154 N VAL A 120 SHEET 1 AA2 2 VAL A 183 PRO A 187 0 SHEET 2 AA2 2 VAL B 183 PRO B 187 -1 O VAL B 184 N PHE A 186 SHEET 1 AA3 2 THR B 119 VAL B 120 0 SHEET 2 AA3 2 ILE B 154 THR B 155 -1 O ILE B 154 N VAL B 120 LINK OD1 ASP A 83 MG MG A 201 1555 1555 2.22 LINK OD1 ASP A 85 MG MG A 201 1555 1555 2.21 LINK OG SER A 87 MG MG A 201 1555 1555 2.11 LINK O THR A 89 MG MG A 201 1555 1555 2.21 LINK OD1 ASP A 113 MG MG A 202 1555 1555 2.19 LINK OD1 ASP A 115 MG MG A 202 1555 1555 2.19 LINK OG SER A 117 MG MG A 202 1555 1555 2.07 LINK O THR A 119 MG MG A 202 1555 1555 2.82 LINK MG MG A 201 O HOH A 343 1555 1555 2.54 LINK MG MG A 201 O HOH A 353 1555 1555 2.68 LINK MG MG A 202 O HOH A 366 1555 1555 1.87 LINK O HOH A 331 MG MG B 203 6545 1555 2.48 LINK OG1 THR B 31 MG MG B 203 1555 1555 2.12 LINK O GLN B 32 MG MG B 203 1555 1555 2.22 LINK O ASP B 33 MG MG B 202 1555 8555 2.70 LINK OD2 ASP B 50 MG MG B 205 1555 1555 2.69 LINK O SER B 61 MG MG B 202 1555 1555 2.62 LINK OD1 ASP B 83 MG MG B 201 1555 1555 2.21 LINK OD1 ASP B 85 MG MG B 201 1555 1555 2.19 LINK OG SER B 87 MG MG B 201 1555 1555 2.10 LINK O THR B 89 MG MG B 201 1555 1555 2.23 LINK MG MG B 201 O HOH B 333 1555 1555 2.28 LINK MG MG B 201 O HOH B 341 1555 1555 2.54 LINK MG MG B 204 O HOH B 360 1555 1555 2.10 LINK MG MG B 204 O HOH B 361 1555 1555 2.10 LINK MG MG B 204 O HOH B 362 1555 1555 2.12 LINK MG MG B 204 O HOH B 363 1555 1555 2.11 LINK MG MG B 204 O HOH B 364 1555 1555 2.10 SITE 1 AC1 6 ASP A 83 ASP A 85 SER A 87 THR A 89 SITE 2 AC1 6 HOH A 343 HOH A 353 SITE 1 AC2 5 ASP A 113 ASP A 115 SER A 117 THR A 119 SITE 2 AC2 5 HOH A 366 SITE 1 AC3 6 ASP B 83 ASP B 85 SER B 87 THR B 89 SITE 2 AC3 6 HOH B 333 HOH B 341 SITE 1 AC4 5 GLN B 32 ASP B 33 TYR B 36 GLY B 37 SITE 2 AC4 5 SER B 61 SITE 1 AC5 5 HOH A 331 THR B 31 GLN B 32 TRP B 99 SITE 2 AC5 5 ASN B 103 SITE 1 AC6 5 HOH B 360 HOH B 361 HOH B 362 HOH B 363 SITE 2 AC6 5 HOH B 364 SITE 1 AC7 2 ASP B 50 ASP B 52 CRYST1 117.832 117.832 86.880 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008487 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008487 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011510 0.00000