HEADER CELL INVASION 11-AUG-14 4UAO TITLE CRYSTAL STRUCTURE OF APICAL MEMBRANE ANTIGEN 1 FROM PLASMODIUM TITLE 2 KNOWLESI IN COMPLEX WITH AN INVASION INHIBITORY ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: APICAL MEROZOITE ANTIGEN 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: FRAGMENT 43-387 OF B3L5E1. N-TERMINAL RESIDUES GLU 41 COMPND 7 AND PHE 42 ARE CLONING ARTIFACTS. C-TERMINAL RESIDUE GLY 388 IS A COMPND 8 CLONING ARTIFACT, AND FOLLOWING RESIDUES LEU 389 TO HIS 410 COMPND 9 CORRESPOND TO EXPRESSION TAGS.; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: IMMUNOGLOBULIN R31C2 LIGHT CHAIN; COMPND 12 CHAIN: B; COMPND 13 OTHER_DETAILS: THE SEQUENCE FOR CHAIN B HAS BEEN DEPOSITED TO GENBANK COMPND 14 (KM225619); COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: IMMUNOGLOBULIN R31C2 VH AND CH1 REGIONS; COMPND 17 CHAIN: C; COMPND 18 OTHER_DETAILS: THE SEQUENCE FOR CHAIN C HAS BEEN DEPOSITED TO GENBANK COMPND 19 (KM225620) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM KNOWLESI; SOURCE 3 ORGANISM_TAXID: 5850; SOURCE 4 GENE: PKH_093110; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: KM71H; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPICZALPHAA; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 12 ORGANISM_COMMON: NORWAY RAT; SOURCE 13 ORGANISM_TAXID: 10116; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 16 ORGANISM_COMMON: NORWAY RAT; SOURCE 17 ORGANISM_TAXID: 10116 KEYWDS MALARIA, CELL INVASION, INVASION INHIBITORY ANTIBODY EXPDTA X-RAY DIFFRACTION AUTHOR B.VULLIEZ-LE NORMAND,F.A.SAUL,G.A.BENTLEY REVDAT 4 23-OCT-24 4UAO 1 REMARK REVDAT 3 20-DEC-23 4UAO 1 REMARK REVDAT 2 16-SEP-15 4UAO 1 REVDAT 1 29-APR-15 4UAO 0 JRNL AUTH B.VULLIEZ-LE NORMAND,B.W.FABER,F.A.SAUL,M.VAN DER EIJK, JRNL AUTH 2 A.W.THOMAS,B.SINGH,C.H.KOCKEN,G.A.BENTLEY JRNL TITL CRYSTAL STRUCTURE OF PLASMODIUM KNOWLESI APICAL MEMBRANE JRNL TITL 2 ANTIGEN 1 AND ITS COMPLEX WITH AN INVASION-INHIBITORY JRNL TITL 3 MONOCLONAL ANTIBODY. JRNL REF PLOS ONE V. 10 23567 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 25886591 JRNL DOI 10.1371/JOURNAL.PONE.0123567 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.A.DEANS,T.ALDERSON,A.W.THOMAS,G.H.MITCHELL,E.S.LENNOX, REMARK 1 AUTH 2 S.COHEN REMARK 1 TITL RAT MONOCLONAL ANTIBODIES WHICH INHIBIT THE IN VITRO REMARK 1 TITL 2 MULTIPLICATION OF PLASMODIUM KNOWLESI. REMARK 1 REF CLIN. EXP. IMMUNOL. V. 49 297 1982 REMARK 1 REFN ISSN 0009-9104 REMARK 1 PMID 6751636 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 17119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 838 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.29 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.57 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2784 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2387 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2663 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE : 0.2974 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.35 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 121 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5988 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 71.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 24.29780 REMARK 3 B22 (A**2) : -38.90610 REMARK 3 B33 (A**2) : 14.60830 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.92940 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.511 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.475 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.881 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.825 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6149 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8342 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2105 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 162 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 892 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6149 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 802 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7237 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.31 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.05 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 24.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UAO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17127 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.15200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.77800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1W81, 2GCY, 1D5I, 1IGF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 6000, 40 MM HEPES PH7.4, 80 MM REMARK 280 NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.93200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.90350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.93200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.90350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE FAB LIGHT AND HEAVY CHAINS ARE NUMBERED ACCORDING TO THE KABAT REMARK 400 CONVENTION REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 41 REMARK 465 PHE A 42 REMARK 465 PRO A 43 REMARK 465 ILE A 44 REMARK 465 ILE A 45 REMARK 465 GLU A 46 REMARK 465 ARG A 47 REMARK 465 SER A 48 REMARK 465 ILE A 49 REMARK 465 ARG A 50 REMARK 465 GLU A 301 REMARK 465 LEU A 302 REMARK 465 PHE A 330 REMARK 465 ASN A 331 REMARK 465 PRO A 387 REMARK 465 GLY A 388 REMARK 465 LEU A 389 REMARK 465 GLU A 390 REMARK 465 GLN A 391 REMARK 465 LYS A 392 REMARK 465 LEU A 393 REMARK 465 ILE A 394 REMARK 465 SER A 395 REMARK 465 GLU A 396 REMARK 465 GLU A 397 REMARK 465 ASP A 398 REMARK 465 LEU A 399 REMARK 465 ASN A 400 REMARK 465 SER A 401 REMARK 465 ALA A 402 REMARK 465 VAL A 403 REMARK 465 ASP A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 207 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 307 CG CD CE NZ REMARK 470 LYS B 183 CG CD CE NZ REMARK 470 LYS C 131 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 215 C - N - CA ANGL. DEV. = 17.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 54 43.82 -92.63 REMARK 500 TRP A 55 -69.92 -132.21 REMARK 500 LYS A 56 -69.14 6.62 REMARK 500 LYS A 61 4.29 -68.27 REMARK 500 ARG A 66 -65.61 -105.76 REMARK 500 ILE A 72 -60.85 -109.96 REMARK 500 LEU A 76 48.19 -141.92 REMARK 500 TYR A 87 -151.01 -124.33 REMARK 500 PRO A 113 150.61 -47.80 REMARK 500 ASN A 130 -24.39 -38.24 REMARK 500 ALA A 131 107.26 -33.13 REMARK 500 ASP A 132 101.20 64.50 REMARK 500 ASP A 133 -1.28 -59.08 REMARK 500 ILE A 135 -74.81 -129.73 REMARK 500 GLU A 149 32.78 -90.99 REMARK 500 ALA A 172 -60.09 -25.27 REMARK 500 ASN A 178 57.92 -91.95 REMARK 500 PRO A 205 -85.97 -84.84 REMARK 500 TYR A 207 -83.55 -66.39 REMARK 500 ASP A 211 81.17 53.99 REMARK 500 LYS A 215 -97.75 58.84 REMARK 500 ALA A 217 -39.77 -39.87 REMARK 500 ASP A 242 50.49 -109.00 REMARK 500 GLU A 244 29.22 -72.97 REMARK 500 ASN A 245 -29.31 -156.81 REMARK 500 ARG A 249 -66.31 -101.83 REMARK 500 ASN A 254 58.85 39.92 REMARK 500 CYS A 265 89.27 -69.73 REMARK 500 GLU A 266 -148.20 -73.40 REMARK 500 ASP A 293 -70.36 -69.34 REMARK 500 GLN A 297 69.51 61.43 REMARK 500 ASN A 315 43.35 33.15 REMARK 500 TYR A 342 45.77 -90.13 REMARK 500 ASN A 351 50.48 -149.61 REMARK 500 ASN A 352 74.69 12.48 REMARK 500 ASN A 366 -8.35 -49.35 REMARK 500 ASP A 367 116.67 -35.16 REMARK 500 PRO B 8 -159.05 -78.53 REMARK 500 PRO B 40 116.24 -29.70 REMARK 500 TYR B 50 47.95 30.93 REMARK 500 ALA B 51 -24.97 57.62 REMARK 500 SER B 63 138.46 -172.96 REMARK 500 SER B 67 80.08 -166.91 REMARK 500 SER B 77 71.50 -108.95 REMARK 500 LEU B 78 124.93 -29.52 REMARK 500 MET B 83 91.02 -69.46 REMARK 500 THR B 114 74.44 -107.34 REMARK 500 ASN B 138 69.09 28.67 REMARK 500 GLU B 154 147.39 -28.93 REMARK 500 ARG B 155 85.72 -153.06 REMARK 500 REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UV6 RELATED DB: PDB REMARK 900 PLASMODIUM KNOWLESI AMA1 DBREF 4UAO A 43 387 UNP B3L5E1 B3L5E1_PLAKH 43 387 DBREF 4UAO B 1 214 PDB 4UAO 4UAO 1 214 DBREF 4UAO C 1 215 PDB 4UAO 4UAO 1 215 SEQADV 4UAO GLU A 41 UNP B3L5E1 CLONING ARTIFACT SEQADV 4UAO PHE A 42 UNP B3L5E1 CLONING ARTIFACT SEQADV 4UAO LYS A 107 UNP B3L5E1 ASN 107 ENGINEERED MUTATION SEQADV 4UAO ASN A 178 UNP B3L5E1 SER 178 ENGINEERED MUTATION SEQADV 4UAO GLU A 189 UNP B3L5E1 ASN 189 ENGINEERED MUTATION SEQADV 4UAO ARG A 240 UNP B3L5E1 SER 240 ENGINEERED MUTATION SEQADV 4UAO GLY A 388 UNP B3L5E1 CLONING ARTIFACT SEQADV 4UAO LEU A 389 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO GLU A 390 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO GLN A 391 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO LYS A 392 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO LEU A 393 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO ILE A 394 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO SER A 395 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO GLU A 396 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO GLU A 397 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO ASP A 398 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO LEU A 399 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO ASN A 400 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO SER A 401 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO ALA A 402 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO VAL A 403 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO ASP A 404 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 405 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 406 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 407 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 408 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 409 UNP B3L5E1 EXPRESSION TAG SEQADV 4UAO HIS A 410 UNP B3L5E1 EXPRESSION TAG SEQRES 1 A 370 GLU PHE PRO ILE ILE GLU ARG SER ILE ARG MET SER ASN SEQRES 2 A 370 PRO TRP LYS ALA PHE MET GLU LYS TYR ASP LEU GLU ARG SEQRES 3 A 370 ALA HIS ASN SER GLY ILE ARG ILE ASP LEU GLY GLU ASP SEQRES 4 A 370 ALA GLU VAL GLY ASN SER LYS TYR ARG ILE PRO ALA GLY SEQRES 5 A 370 LYS CYS PRO VAL PHE GLY LYS GLY ILE VAL ILE GLU ASN SEQRES 6 A 370 SER LYS VAL SER PHE LEU THR PRO VAL ALA THR GLY ALA SEQRES 7 A 370 GLN ARG LEU LYS GLU GLY GLY PHE ALA PHE PRO ASN ALA SEQRES 8 A 370 ASP ASP HIS ILE SER PRO ILE THR ILE ALA ASN LEU LYS SEQRES 9 A 370 GLU ARG TYR LYS GLU ASN ALA ASP LEU MET LYS LEU ASN SEQRES 10 A 370 ASP ILE ALA LEU CYS LYS THR HIS ALA ALA SER PHE VAL SEQRES 11 A 370 ILE ALA GLU ASP GLN ASN THR ASN TYR ARG HIS PRO ALA SEQRES 12 A 370 VAL TYR ASP GLU LYS GLU LYS THR CYS TYR MET LEU TYR SEQRES 13 A 370 LEU SER ALA GLN GLU ASN MET GLY PRO ARG TYR CYS SER SEQRES 14 A 370 PRO ASP SER GLN ASN LYS ASP ALA MET PHE CYS PHE LYS SEQRES 15 A 370 PRO ASP LYS ASN GLU LYS PHE ASP ASN LEU VAL TYR LEU SEQRES 16 A 370 SER LYS ASN VAL ARG ASN ASP TRP GLU ASN LYS CYS PRO SEQRES 17 A 370 ARG LYS ASN LEU GLY ASN ALA LYS PHE GLY LEU TRP VAL SEQRES 18 A 370 ASP GLY ASN CYS GLU GLU ILE PRO TYR VAL ASN GLU VAL SEQRES 19 A 370 GLU ALA ARG SER LEU ARG GLU CYS ASN ARG ILE VAL PHE SEQRES 20 A 370 GLU ALA SER ALA SER ASP GLN PRO ARG GLN TYR GLU GLU SEQRES 21 A 370 GLU LEU THR ASP TYR GLU LYS ILE GLN GLU GLY PHE ARG SEQRES 22 A 370 GLN ASN ASN ARG ASP MET ILE LYS SER ALA PHE LEU PRO SEQRES 23 A 370 VAL GLY ALA PHE ASN SER ASP ASN PHE LYS SER LYS GLY SEQRES 24 A 370 ARG GLY TYR ASN TRP ALA ASN PHE ASP SER VAL ASN ASN SEQRES 25 A 370 LYS CYS TYR ILE PHE ASN THR LYS PRO THR CYS LEU ILE SEQRES 26 A 370 ASN ASP LYS ASN PHE PHE ALA THR THR ALA LEU SER HIS SEQRES 27 A 370 PRO GLN GLU VAL ASP ASN GLU PHE PRO GLY LEU GLU GLN SEQRES 28 A 370 LYS LEU ILE SER GLU GLU ASP LEU ASN SER ALA VAL ASP SEQRES 29 A 370 HIS HIS HIS HIS HIS HIS SEQRES 1 B 214 ASP ILE GLN MET THR GLN SER PRO SER SER MET SER ALA SEQRES 2 B 214 SER LEU GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 B 214 GLN ASP ILE GLY ASN ASN LEU ILE TRP PHE GLN GLN LYS SEQRES 4 B 214 PRO GLY LYS SER PRO ARG ARG MET ILE TYR TYR ALA THR SEQRES 5 B 214 LYS LEU ALA ASN GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 214 ARG SER GLY SER ASP TYR SER LEU THR ILE ILE SER LEU SEQRES 7 B 214 GLU SER GLU ASP MET ALA ASP TYR HIS CYS LEU GLN TYR SEQRES 8 B 214 LYS GLN PHE PRO LEU THR PHE GLY SER GLY THR ARG LEU SEQRES 9 B 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 B 214 PHE PRO PRO SER THR GLU GLN LEU ALA THR GLY GLY ALA SEQRES 11 B 214 SER VAL VAL CYS LEU MET ASN ASN PHE TYR PRO ARG ASP SEQRES 12 B 214 ILE SER VAL LYS TRP LYS ILE ASP GLY THR GLU ARG ARG SEQRES 13 B 214 ASP GLY VAL LEU ASP SER VAL THR ASP GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER MET SER SER THR LEU SER LEU THR SEQRES 15 B 214 LYS ALA ASP TYR GLU SER HIS ASN LEU TYR THR CYS GLU SEQRES 16 B 214 VAL VAL HIS LYS THR SER SER SER PRO VAL VAL LYS SER SEQRES 17 B 214 PHE ASN ARG ASN GLU CYS SEQRES 1 C 223 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 223 PRO GLY ARG SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 C 223 PHE THR PHE SER ASN TYR TYR MET ALA TRP VAL ARG GLN SEQRES 4 C 223 ALA PRO LYS LYS GLY LEU GLU TRP VAL ALA THR ILE THR SEQRES 5 C 223 THR SER GLY SER ARG SER TYR TYR PRO ASP SER VAL LYS SEQRES 6 C 223 GLY ARG PHE THR ILE SER ARG ASP ASN SER GLU SER SER SEQRES 7 C 223 LEU TYR LEU GLN MET ASN SER LEU GLU SER GLU ASP THR SEQRES 8 C 223 ALA THR TYR TYR CYS ALA ARG ARG GLY TYR GLY GLY TYR SEQRES 9 C 223 SER GLU ASP PHE ASP TYR TRP GLY GLN GLY VAL MET VAL SEQRES 10 C 223 THR VAL SER SER ALA GLU THR THR ALA PRO SER VAL TYR SEQRES 11 C 223 PRO LEU ALA PRO GLY THR ALA LEU LYS SER ASN SER MET SEQRES 12 C 223 VAL THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU SEQRES 13 C 223 PRO VAL THR VAL THR TRP ASN SER GLY ALA LEU SER SER SEQRES 14 C 223 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER GLY LEU SEQRES 15 C 223 TYR THR LEU THR SER SER VAL THR VAL PRO SER SER THR SEQRES 16 C 223 TRP SER SER GLN ALA VAL THR CYS ASN VAL ALA HIS PRO SEQRES 17 C 223 ALA SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG SEQRES 18 C 223 GLU CYS HELIX 1 AA1 ALA A 57 TYR A 62 5 6 HELIX 2 AA2 ASP A 63 HIS A 68 1 6 HELIX 3 AA3 ARG A 120 GLY A 124 5 5 HELIX 4 AA4 ILE A 140 TYR A 147 1 8 HELIX 5 AA5 ASN A 150 LYS A 155 1 6 HELIX 6 AA6 ASN A 157 SER A 168 1 12 HELIX 7 AA7 ILE A 171 GLN A 175 5 5 HELIX 8 AA8 ASP A 242 CYS A 247 1 6 HELIX 9 AA9 SER A 278 SER A 290 1 13 HELIX 10 AB1 ASP A 304 GLN A 314 1 11 HELIX 11 AB2 ASN A 316 SER A 322 1 7 HELIX 12 AB3 GLU B 123 GLY B 128 1 6 HELIX 13 AB4 LYS B 183 SER B 188 1 6 HELIX 14 AB5 THR C 28 TYR C 32 5 5 HELIX 15 AB6 ASN C 73 GLU C 75 5 3 HELIX 16 AB7 GLU C 83 THR C 87 5 5 HELIX 17 AB8 SER C 156 ALA C 158 5 3 HELIX 18 AB9 SER C 185 GLN C 191 1 7 SHEET 1 AA1 5 VAL A 96 PHE A 97 0 SHEET 2 AA1 5 LEU A 232 LEU A 235 -1 O TYR A 234 N VAL A 96 SHEET 3 AA1 5 ALA A 183 ASP A 186 -1 N ALA A 183 O LEU A 235 SHEET 4 AA1 5 THR A 191 MET A 194 -1 O TYR A 193 N VAL A 184 SHEET 5 AA1 5 ILE A 138 THR A 139 -1 N ILE A 138 O CYS A 192 SHEET 1 AA2 2 LYS A 99 GLU A 104 0 SHEET 2 AA2 2 CYS A 220 LYS A 225 -1 O ASP A 224 N GLY A 100 SHEET 1 AA3 2 ASN A 251 LEU A 252 0 SHEET 2 AA3 2 VAL A 382 ASP A 383 1 O ASP A 383 N ASN A 251 SHEET 1 AA4 2 LYS A 256 GLY A 258 0 SHEET 2 AA4 2 CYS A 363 ILE A 365 -1 O CYS A 363 N GLY A 258 SHEET 1 AA5 2 TRP A 260 VAL A 261 0 SHEET 2 AA5 2 ASN A 264 CYS A 265 -1 O ASN A 264 N VAL A 261 SHEET 1 AA6 4 ASN A 272 GLU A 275 0 SHEET 2 AA6 4 LYS A 353 PHE A 357 -1 O CYS A 354 N VAL A 274 SHEET 3 AA6 4 TRP A 344 ASP A 348 -1 N ASP A 348 O LYS A 353 SHEET 4 AA6 4 PHE A 370 THR A 374 -1 O THR A 373 N ALA A 345 SHEET 1 AA7 6 SER B 10 ALA B 13 0 SHEET 2 AA7 6 THR B 102 ILE B 106 1 O ARG B 103 N MET B 11 SHEET 3 AA7 6 ALA B 84 HIS B 87 -1 N ALA B 84 O LEU B 104 SHEET 4 AA7 6 TRP B 35 GLN B 38 -1 N GLN B 38 O ASP B 85 SHEET 5 AA7 6 ARG B 45 TYR B 49 -1 O ARG B 45 N GLN B 37 SHEET 6 AA7 6 LYS B 53 LEU B 54 -1 O LYS B 53 N TYR B 49 SHEET 1 AA8 3 VAL B 19 GLN B 24 0 SHEET 2 AA8 3 ASP B 70 ILE B 75 -1 O ILE B 75 N VAL B 19 SHEET 3 AA8 3 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AA9 2 LEU B 89 GLN B 90 0 SHEET 2 AA9 2 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 90 SHEET 1 AB1 4 SER B 116 PHE B 118 0 SHEET 2 AB1 4 GLY B 129 PHE B 139 -1 O VAL B 133 N PHE B 118 SHEET 3 AB1 4 TYR B 173 THR B 182 -1 O LEU B 179 N VAL B 132 SHEET 4 AB1 4 VAL B 159 LEU B 160 -1 N LEU B 160 O THR B 178 SHEET 1 AB2 4 THR B 153 GLU B 154 0 SHEET 2 AB2 4 ILE B 144 ILE B 150 -1 N ILE B 150 O THR B 153 SHEET 3 AB2 4 LEU B 191 HIS B 198 -1 O THR B 193 N LYS B 149 SHEET 4 AB2 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AB3 4 GLN C 3 GLU C 6 0 SHEET 2 AB3 4 LEU C 18 SER C 25 -1 O SER C 25 N GLN C 3 SHEET 3 AB3 4 SER C 77 MET C 82 -1 O MET C 82 N LEU C 18 SHEET 4 AB3 4 PHE C 67 ASP C 72 -1 N THR C 68 O GLN C 81 SHEET 1 AB4 6 GLY C 10 VAL C 12 0 SHEET 2 AB4 6 VAL C 107 VAL C 111 1 O THR C 110 N GLY C 10 SHEET 3 AB4 6 ALA C 88 ARG C 94 -1 N TYR C 90 O VAL C 107 SHEET 4 AB4 6 MET C 34 GLN C 39 -1 N VAL C 37 O TYR C 91 SHEET 5 AB4 6 LEU C 45 ILE C 51 -1 O VAL C 48 N TRP C 36 SHEET 6 AB4 6 SER C 57 TYR C 58 -1 O TYR C 58 N THR C 50 SHEET 1 AB5 4 SER C 120 TYR C 122 0 SHEET 2 AB5 4 MET C 135 TYR C 145 -1 O LEU C 141 N TYR C 122 SHEET 3 AB5 4 LEU C 174 PRO C 184 -1 O TYR C 175 N TYR C 145 SHEET 4 AB5 4 VAL C 163 THR C 165 -1 N HIS C 164 O SER C 180 SHEET 1 AB6 4 SER C 120 TYR C 122 0 SHEET 2 AB6 4 MET C 135 TYR C 145 -1 O LEU C 141 N TYR C 122 SHEET 3 AB6 4 LEU C 174 PRO C 184 -1 O TYR C 175 N TYR C 145 SHEET 4 AB6 4 VAL C 169 GLN C 171 -1 N VAL C 169 O THR C 176 SHEET 1 AB7 3 THR C 151 TRP C 154 0 SHEET 2 AB7 3 THR C 194 ALA C 198 -1 O ALA C 198 N THR C 151 SHEET 3 AB7 3 VAL C 206 LYS C 209 -1 O LYS C 208 N CYS C 195 SSBOND 1 CYS A 94 CYS A 247 1555 1555 2.05 SSBOND 2 CYS A 162 CYS A 192 1555 1555 2.05 SSBOND 3 CYS A 208 CYS A 220 1555 1555 2.03 SSBOND 4 CYS A 265 CYS A 363 1555 1555 2.05 SSBOND 5 CYS A 282 CYS A 354 1555 1555 2.06 SSBOND 6 CYS B 23 CYS B 88 1555 1555 2.07 SSBOND 7 CYS B 134 CYS B 194 1555 1555 2.04 SSBOND 8 CYS B 214 CYS C 215 1555 1555 2.05 SSBOND 9 CYS C 22 CYS C 92 1555 1555 2.05 SSBOND 10 CYS C 140 CYS C 195 1555 1555 2.05 CISPEP 1 MET A 51 SER A 52 0 1.61 CISPEP 2 SER A 136 PRO A 137 0 -10.37 CISPEP 3 SER B 7 PRO B 8 0 1.08 CISPEP 4 PHE B 94 PRO B 95 0 -4.01 CISPEP 5 TYR B 140 PRO B 141 0 -2.53 CISPEP 6 PHE C 146 PRO C 147 0 -0.29 CISPEP 7 GLU C 148 PRO C 149 0 14.28 CISPEP 8 GLU C 214 CYS C 215 0 0.00 CRYST1 165.864 71.807 90.688 90.00 116.37 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006029 0.000000 0.002989 0.00000 SCALE2 0.000000 0.013926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012307 0.00000