data_4UB3 # _entry.id 4UB3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4UB3 pdb_00004ub3 10.2210/pdb4ub3/pdb WWPDB D_1000203116 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4UAW unspecified PDB . 4UAY unspecified PDB . 4UAZ unspecified PDB . 4UB1 unspecified PDB . 4UB2 unspecified PDB . 4UB4 unspecified PDB . 4UB5 unspecified PDB . 4UBB unspecified PDB . 4UBC unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4UB3 _pdbx_database_status.recvd_initial_deposition_date 2014-08-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Freudenthal, B.D.' 1 ? 'Wilson, S.H.' 2 ? 'Beard, W.A.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nature _citation.journal_id_ASTM NATUAS _citation.journal_id_CSD 0006 _citation.journal_id_ISSN 1476-4687 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 517 _citation.language ? _citation.page_first 635 _citation.page_last 639 _citation.title 'Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nature13886 _citation.pdbx_database_id_PubMed 25409153 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freudenthal, B.D.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Perera, L.' 3 ? primary 'Shock, D.D.' 4 ? primary 'Kim, T.' 5 ? primary 'Schlick, T.' 6 ? primary 'Wilson, S.H.' 7 ? # _cell.entry_id 4UB3 _cell.length_a 50.698 _cell.length_b 80.094 _cell.length_c 55.358 _cell.angle_alpha 90.00 _cell.angle_beta 107.80 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UB3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4829.133 1 ? ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*(8OG))-3'" 3406.209 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 4 polymer man 'DNA polymerase beta' 38241.672 1 2.7.7.7,4.2.99.- ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 8 water nat water 18.015 173 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DC)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACCGCGCATCAGC T ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(8OG)' GCTGATGCGCG P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DG n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 DC n 2 11 8OG n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 335 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Tap56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWL11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 11 'synthetic construct' ? 32630 ? 3 1 sample 1 5 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 4UB3 4UB3 ? 1 ? 1 2 PDB 4UB3 4UB3 ? 2 ? 1 3 PDB 4UB3 4UB3 ? 3 ? 1 4 UNP DPOLB_HUMAN P06746 ? 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4UB3 T 1 ? 16 ? 4UB3 1 ? 16 ? 1 16 2 2 4UB3 P 1 ? 11 ? 4UB3 1 ? 11 ? 1 11 3 3 4UB3 D 1 ? 5 ? 4UB3 1 ? 5 ? 1 5 4 4 4UB3 A 1 ? 335 ? P06746 1 ? 335 ? 1 335 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4UB3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM imidazole, 350 mM sodium chloride, 17% PEG3350, pH 8.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-07-03 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4UB3 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.06 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27186 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.7 _reflns.pdbx_Rmerge_I_obs 0.083 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.13 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 91.2 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.511 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 4.8703 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 4.2122 _refine.aniso_B[2][2] -1.6900 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -3.1917 _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4UB3 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.06 _refine.ls_d_res_low 21.343 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21786 _refine.ls_number_reflns_R_free 1086 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 83.08 _refine.ls_percent_reflns_R_free 4.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2171 _refine.ls_R_factor_R_free 0.2744 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2141 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol 29.715 _refine.solvent_model_param_ksol 0.344 _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 2FMS' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.60 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.33 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2588 _refine_hist.pdbx_number_atoms_nucleic_acid 652 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 3425 _refine_hist.d_res_high 2.06 _refine_hist.d_res_low 21.343 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 ? 3514 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.073 ? 4906 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 20.481 ? 1397 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.056 ? 527 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 513 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 2.06 2.1502 . . 123 2385 77.00 . . . 0.3485 . 0.3000 . . . . . . . . 'X-RAY DIFFRACTION' 2.1502 2.2635 . . 140 2650 85.00 . . . 0.3555 . 0.2639 . . . . . . . . 'X-RAY DIFFRACTION' 2.2635 2.4051 . . 141 2512 81.00 . . . 0.3675 . 0.2537 . . . . . . . . 'X-RAY DIFFRACTION' 2.4051 2.5905 . . 121 2255 73.00 . . . 0.3811 . 0.2939 . . . . . . . . 'X-RAY DIFFRACTION' 2.5905 2.8507 . . 116 2254 73.00 . . . 0.3379 . 0.2549 . . . . . . . . 'X-RAY DIFFRACTION' 2.8507 3.2619 . . 133 2576 82.00 . . . 0.3067 . 0.2303 . . . . . . . . 'X-RAY DIFFRACTION' 3.2619 4.1049 . . 152 3020 96.00 . . . 0.2357 . 0.1968 . . . . . . . . 'X-RAY DIFFRACTION' 4.1049 21.3441 . . 160 3048 96.00 . . . 0.2019 . 0.1605 . . . . . . . . # _struct.entry_id 4UB3 _struct.title 'DNA polymerase beta closed product complex with a templating cytosine and 8-oxodGMP, 60 s' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4UB3 _struct_keywords.text 'DNA polymerase, TRANSFERASE, LYASE-DNA complex' _struct_keywords.pdbx_keywords 'TRANSFERASE, LYASE/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA D 32 ? TYR D 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 AA3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY D 66 ? GLY D 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU D 82 ? ASP D 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR D 121 ? ASN D 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 AA9 GLU D 129 ? LEU D 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 AB1 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 GLY D 144 ? LYS D 148 ? GLY A 144 LYS A 148 5 ? 5 HELX_P HELX_P12 AB3 ARG D 152 ? ASP D 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 CYS D 178 ? ARG D 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 AB5 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 AB6 PRO D 261 ? ASP D 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER D 275 ? GLY D 290 ? SER A 275 GLY A 290 1 ? 16 HELX_P HELX_P18 AB9 SER D 315 ? ILE D 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 AC1 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 10 "O3'" ? ? ? 1_555 B 8OG 11 P ? ? P DC 10 P 8OG 11 1_555 ? ? ? ? ? ? ? 1.610 ? ? metalc1 metalc ? ? B DC 10 "O3'" ? ? ? 1_555 H NA . NA ? ? P DC 10 A NA 403 1_555 ? ? ? ? ? ? ? 2.565 ? ? metalc2 metalc ? ? B 8OG 11 OP1 ? ? ? 1_555 E MG . MG ? ? P 8OG 11 P MG 101 1_555 ? ? ? ? ? ? ? 2.014 ? ? metalc3 metalc ? ? B 8OG 11 OP2 ? ? ? 1_555 F MG . MG ? ? P 8OG 11 A MG 401 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc4 metalc ? ? B 8OG 11 OP2 ? ? ? 1_555 H NA . NA ? ? P 8OG 11 A NA 403 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? P MG 101 P HOH 203 1_555 ? ? ? ? ? ? ? 1.967 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? P MG 101 P HOH 207 1_555 ? ? ? ? ? ? ? 2.013 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? P MG 101 P HOH 215 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc8 metalc ? ? E MG . MG ? ? ? 1_555 G PPV . O12 A ? P MG 101 A PPV 402 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 G PPV . O12 B ? P MG 101 A PPV 402 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 L HOH . O ? ? P MG 101 A HOH 612 1_555 ? ? ? ? ? ? ? 2.030 ? ? metalc11 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.036 ? ? metalc12 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 H NA . NA ? ? A ASP 190 A NA 403 1_555 ? ? ? ? ? ? ? 3.186 ? ? metalc13 metalc ? ? D ASP 190 OD2 ? ? ? 1_555 H NA . NA ? ? A ASP 190 A NA 403 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc14 metalc ? ? D ASP 192 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 192 A MG 401 1_555 ? ? ? ? ? ? ? 2.209 ? ? metalc15 metalc ? ? D ASP 192 OD1 ? ? ? 1_555 H NA . NA ? ? A ASP 192 A NA 403 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc16 metalc ? ? D ASP 256 OD2 ? ? ? 1_555 H NA . NA ? ? A ASP 256 A NA 403 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc17 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O12 A ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 2.930 ? ? metalc18 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O12 B ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 2.918 ? ? metalc19 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O32 A ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 1.942 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O32 B ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc21 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O11 B ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 2.936 ? ? metalc22 metalc ? ? F MG . MG ? ? ? 1_555 G PPV . O21 A ? A MG 401 A PPV 402 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 L HOH . O ? ? A MG 401 A HOH 544 1_555 ? ? ? ? ? ? ? 2.146 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog11 hydrog ? ? A DC 5 N3 A ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N4 A ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 O2 A ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 A ? ? 1_555 B 8OG 11 N1 ? ? T DC 6 P 8OG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 A ? ? 1_555 B 8OG 11 O6 ? ? T DC 6 P 8OG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 A ? ? 1_555 B 8OG 11 N2 ? ? T DC 6 P 8OG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 10 N3 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 10 O2 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 10 N4 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE D 150 ? PRO D 151 ? ILE A 150 PRO A 151 AA1 2 SER D 187 ? SER D 188 ? SER A 187 SER A 188 AA2 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 AA2 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 AA2 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 AA2 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 AA2 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 AA3 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 AA3 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE D 150 ? N ILE A 150 O SER D 188 ? O SER A 188 AA2 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 AA2 2 3 N LEU D 195 ? N LEU A 195 O ARG D 258 ? O ARG A 258 AA2 3 4 O ILE D 255 ? O ILE A 255 N GLY D 237 ? N GLY A 237 AA2 4 5 O MET D 236 ? O MET A 236 N SER D 229 ? N SER A 229 AA3 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software P MG 101 ? 6 'binding site for residue MG P 101' AC2 Software A MG 401 ? 5 'binding site for residue MG A 401' AC3 Software A PPV 402 ? 16 'binding site for residue PPV A 402' AC4 Software A NA 403 ? 5 'binding site for residue NA A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 PPV G . ? PPV A 402 . ? 1_555 ? 2 AC1 6 HOH L . ? HOH A 612 . ? 1_555 ? 3 AC1 6 8OG B 11 ? 8OG P 11 . ? 1_555 ? 4 AC1 6 HOH J . ? HOH P 203 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH P 207 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH P 215 . ? 1_555 ? 7 AC2 5 ASP D 190 ? ASP A 190 . ? 1_555 ? 8 AC2 5 ASP D 192 ? ASP A 192 . ? 1_555 ? 9 AC2 5 PPV G . ? PPV A 402 . ? 1_555 ? 10 AC2 5 HOH L . ? HOH A 544 . ? 1_555 ? 11 AC2 5 8OG B 11 ? 8OG P 11 . ? 1_555 ? 12 AC3 16 ARG D 149 ? ARG A 149 . ? 1_555 ? 13 AC3 16 GLY D 179 ? GLY A 179 . ? 1_555 ? 14 AC3 16 SER D 180 ? SER A 180 . ? 1_555 ? 15 AC3 16 ARG D 183 ? ARG A 183 . ? 1_555 ? 16 AC3 16 SER D 188 ? SER A 188 . ? 1_555 ? 17 AC3 16 GLY D 189 ? GLY A 189 . ? 1_555 ? 18 AC3 16 ASP D 190 ? ASP A 190 . ? 1_555 ? 19 AC3 16 ASP D 192 ? ASP A 192 . ? 1_555 ? 20 AC3 16 MG F . ? MG A 401 . ? 1_555 ? 21 AC3 16 HOH L . ? HOH A 538 . ? 1_555 ? 22 AC3 16 HOH L . ? HOH A 544 . ? 1_555 ? 23 AC3 16 HOH L . ? HOH A 612 . ? 1_555 ? 24 AC3 16 8OG B 11 ? 8OG P 11 . ? 1_555 ? 25 AC3 16 MG E . ? MG P 101 . ? 1_555 ? 26 AC3 16 HOH J . ? HOH P 207 . ? 1_555 ? 27 AC3 16 HOH J . ? HOH P 215 . ? 1_555 ? 28 AC4 5 ASP D 190 ? ASP A 190 . ? 1_555 ? 29 AC4 5 ASP D 192 ? ASP A 192 . ? 1_555 ? 30 AC4 5 ASP D 256 ? ASP A 256 . ? 1_555 ? 31 AC4 5 DC B 10 ? DC P 10 . ? 1_555 ? 32 AC4 5 8OG B 11 ? 8OG P 11 . ? 1_555 ? # _atom_sites.entry_id 4UB3 _atom_sites.fract_transf_matrix[1][1] 0.019725 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006333 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012485 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018972 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC T . n A 1 2 DC 2 2 2 DC DC T . n A 1 3 DG 3 3 3 DG DG T . n A 1 4 DA 4 4 4 DA DA T . n A 1 5 DC 5 5 5 DC DC T . n A 1 6 DC 6 6 6 DC DC T . n A 1 7 DG 7 7 7 DG DG T . n A 1 8 DC 8 8 8 DC DC T . n A 1 9 DG 9 9 9 DG DG T . n A 1 10 DC 10 10 10 DC DC T . n A 1 11 DA 11 11 11 DA DA T . n A 1 12 DT 12 12 12 DT DT T . n A 1 13 DC 13 13 13 DC DC T . n A 1 14 DA 14 14 14 DA DA T . n A 1 15 DG 15 15 15 DG DG T . n A 1 16 DC 16 16 16 DC DC T . n B 2 1 DG 1 1 1 DG DG P . n B 2 2 DC 2 2 2 DC DC P . n B 2 3 DT 3 3 3 DT DT P . n B 2 4 DG 4 4 4 DG DG P . n B 2 5 DA 5 5 5 DA DA P . n B 2 6 DT 6 6 6 DT DT P . n B 2 7 DG 7 7 7 DG DG P . n B 2 8 DC 8 8 8 DC DC P . n B 2 9 DG 9 9 9 DG DG P . n B 2 10 DC 10 10 10 DC DC P . n B 2 11 8OG 11 11 11 8OG 8OG P . n C 3 1 DG 1 1 1 DG DG D . n C 3 2 DT 2 2 2 DT DT D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DG 4 4 4 DG DG D . n C 3 5 DG 5 5 5 DG DG D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 ? ? ? A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS LYS A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS LYS A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 ? ? ? A . n D 4 303 VAL 303 303 ? ? ? A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 335 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 101 2 MG MG P . F 5 MG 1 401 1 MG MG A . G 6 PPV 1 402 1 PPV PPV A . H 7 NA 1 403 1 NA NA A . I 8 HOH 1 101 106 HOH HOH T . I 8 HOH 2 102 154 HOH HOH T . I 8 HOH 3 103 136 HOH HOH T . I 8 HOH 4 104 13 HOH HOH T . I 8 HOH 5 105 20 HOH HOH T . I 8 HOH 6 106 24 HOH HOH T . I 8 HOH 7 107 25 HOH HOH T . I 8 HOH 8 108 26 HOH HOH T . I 8 HOH 9 109 28 HOH HOH T . I 8 HOH 10 110 38 HOH HOH T . I 8 HOH 11 111 69 HOH HOH T . I 8 HOH 12 112 92 HOH HOH T . I 8 HOH 13 113 97 HOH HOH T . I 8 HOH 14 114 112 HOH HOH T . I 8 HOH 15 115 128 HOH HOH T . I 8 HOH 16 116 149 HOH HOH T . I 8 HOH 17 117 171 HOH HOH T . J 8 HOH 1 201 1 HOH HOH P . J 8 HOH 2 202 35 HOH HOH P . J 8 HOH 3 203 43 HOH HOH P . J 8 HOH 4 204 65 HOH HOH P . J 8 HOH 5 205 75 HOH HOH P . J 8 HOH 6 206 104 HOH HOH P . J 8 HOH 7 207 121 HOH HOH P . J 8 HOH 8 208 130 HOH HOH P . J 8 HOH 9 209 131 HOH HOH P . J 8 HOH 10 210 134 HOH HOH P . J 8 HOH 11 211 150 HOH HOH P . J 8 HOH 12 212 151 HOH HOH P . J 8 HOH 13 213 164 HOH HOH P . J 8 HOH 14 214 168 HOH HOH P . J 8 HOH 15 215 173 HOH HOH P . K 8 HOH 1 101 116 HOH HOH D . K 8 HOH 2 102 129 HOH HOH D . K 8 HOH 3 103 132 HOH HOH D . K 8 HOH 4 104 142 HOH HOH D . K 8 HOH 5 105 148 HOH HOH D . L 8 HOH 1 501 124 HOH HOH A . L 8 HOH 2 502 11 HOH HOH A . L 8 HOH 3 503 21 HOH HOH A . L 8 HOH 4 504 118 HOH HOH A . L 8 HOH 5 505 165 HOH HOH A . L 8 HOH 6 506 17 HOH HOH A . L 8 HOH 7 507 27 HOH HOH A . L 8 HOH 8 508 47 HOH HOH A . L 8 HOH 9 509 2 HOH HOH A . L 8 HOH 10 510 59 HOH HOH A . L 8 HOH 11 511 163 HOH HOH A . L 8 HOH 12 512 60 HOH HOH A . L 8 HOH 13 513 158 HOH HOH A . L 8 HOH 14 514 146 HOH HOH A . L 8 HOH 15 515 33 HOH HOH A . L 8 HOH 16 516 56 HOH HOH A . L 8 HOH 17 517 157 HOH HOH A . L 8 HOH 18 518 55 HOH HOH A . L 8 HOH 19 519 32 HOH HOH A . L 8 HOH 20 520 117 HOH HOH A . L 8 HOH 21 521 7 HOH HOH A . L 8 HOH 22 522 88 HOH HOH A . L 8 HOH 23 523 67 HOH HOH A . L 8 HOH 24 524 93 HOH HOH A . L 8 HOH 25 525 81 HOH HOH A . L 8 HOH 26 526 73 HOH HOH A . L 8 HOH 27 527 100 HOH HOH A . L 8 HOH 28 528 52 HOH HOH A . L 8 HOH 29 529 167 HOH HOH A . L 8 HOH 30 530 120 HOH HOH A . L 8 HOH 31 531 76 HOH HOH A . L 8 HOH 32 532 143 HOH HOH A . L 8 HOH 33 533 138 HOH HOH A . L 8 HOH 34 534 159 HOH HOH A . L 8 HOH 35 535 3 HOH HOH A . L 8 HOH 36 536 4 HOH HOH A . L 8 HOH 37 537 5 HOH HOH A . L 8 HOH 38 538 6 HOH HOH A . L 8 HOH 39 539 8 HOH HOH A . L 8 HOH 40 540 9 HOH HOH A . L 8 HOH 41 541 10 HOH HOH A . L 8 HOH 42 542 12 HOH HOH A . L 8 HOH 43 543 14 HOH HOH A . L 8 HOH 44 544 15 HOH HOH A . L 8 HOH 45 545 16 HOH HOH A . L 8 HOH 46 546 18 HOH HOH A . L 8 HOH 47 547 19 HOH HOH A . L 8 HOH 48 548 22 HOH HOH A . L 8 HOH 49 549 23 HOH HOH A . L 8 HOH 50 550 29 HOH HOH A . L 8 HOH 51 551 30 HOH HOH A . L 8 HOH 52 552 31 HOH HOH A . L 8 HOH 53 553 34 HOH HOH A . L 8 HOH 54 554 36 HOH HOH A . L 8 HOH 55 555 37 HOH HOH A . L 8 HOH 56 556 39 HOH HOH A . L 8 HOH 57 557 40 HOH HOH A . L 8 HOH 58 558 41 HOH HOH A . L 8 HOH 59 559 42 HOH HOH A . L 8 HOH 60 560 44 HOH HOH A . L 8 HOH 61 561 45 HOH HOH A . L 8 HOH 62 562 46 HOH HOH A . L 8 HOH 63 563 48 HOH HOH A . L 8 HOH 64 564 49 HOH HOH A . L 8 HOH 65 565 50 HOH HOH A . L 8 HOH 66 566 51 HOH HOH A . L 8 HOH 67 567 53 HOH HOH A . L 8 HOH 68 568 54 HOH HOH A . L 8 HOH 69 569 57 HOH HOH A . L 8 HOH 70 570 58 HOH HOH A . L 8 HOH 71 571 61 HOH HOH A . L 8 HOH 72 572 62 HOH HOH A . L 8 HOH 73 573 63 HOH HOH A . L 8 HOH 74 574 64 HOH HOH A . L 8 HOH 75 575 66 HOH HOH A . L 8 HOH 76 576 68 HOH HOH A . L 8 HOH 77 577 70 HOH HOH A . L 8 HOH 78 578 71 HOH HOH A . L 8 HOH 79 579 72 HOH HOH A . L 8 HOH 80 580 74 HOH HOH A . L 8 HOH 81 581 77 HOH HOH A . L 8 HOH 82 582 78 HOH HOH A . L 8 HOH 83 583 79 HOH HOH A . L 8 HOH 84 584 80 HOH HOH A . L 8 HOH 85 585 82 HOH HOH A . L 8 HOH 86 586 83 HOH HOH A . L 8 HOH 87 587 84 HOH HOH A . L 8 HOH 88 588 85 HOH HOH A . L 8 HOH 89 589 86 HOH HOH A . L 8 HOH 90 590 87 HOH HOH A . L 8 HOH 91 591 89 HOH HOH A . L 8 HOH 92 592 90 HOH HOH A . L 8 HOH 93 593 91 HOH HOH A . L 8 HOH 94 594 94 HOH HOH A . L 8 HOH 95 595 95 HOH HOH A . L 8 HOH 96 596 96 HOH HOH A . L 8 HOH 97 597 98 HOH HOH A . L 8 HOH 98 598 99 HOH HOH A . L 8 HOH 99 599 101 HOH HOH A . L 8 HOH 100 600 102 HOH HOH A . L 8 HOH 101 601 103 HOH HOH A . L 8 HOH 102 602 105 HOH HOH A . L 8 HOH 103 603 107 HOH HOH A . L 8 HOH 104 604 108 HOH HOH A . L 8 HOH 105 605 109 HOH HOH A . L 8 HOH 106 606 110 HOH HOH A . L 8 HOH 107 607 111 HOH HOH A . L 8 HOH 108 608 113 HOH HOH A . L 8 HOH 109 609 114 HOH HOH A . L 8 HOH 110 610 115 HOH HOH A . L 8 HOH 111 611 119 HOH HOH A . L 8 HOH 112 612 122 HOH HOH A . L 8 HOH 113 613 123 HOH HOH A . L 8 HOH 114 614 125 HOH HOH A . L 8 HOH 115 615 126 HOH HOH A . L 8 HOH 116 616 127 HOH HOH A . L 8 HOH 117 617 133 HOH HOH A . L 8 HOH 118 618 135 HOH HOH A . L 8 HOH 119 619 137 HOH HOH A . L 8 HOH 120 620 139 HOH HOH A . L 8 HOH 121 621 140 HOH HOH A . L 8 HOH 122 622 141 HOH HOH A . L 8 HOH 123 623 144 HOH HOH A . L 8 HOH 124 624 145 HOH HOH A . L 8 HOH 125 625 147 HOH HOH A . L 8 HOH 126 626 152 HOH HOH A . L 8 HOH 127 627 153 HOH HOH A . L 8 HOH 128 628 155 HOH HOH A . L 8 HOH 129 629 156 HOH HOH A . L 8 HOH 130 630 160 HOH HOH A . L 8 HOH 131 631 161 HOH HOH A . L 8 HOH 132 632 162 HOH HOH A . L 8 HOH 133 633 166 HOH HOH A . L 8 HOH 134 634 169 HOH HOH A . L 8 HOH 135 635 170 HOH HOH A . L 8 HOH 136 636 172 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5740 ? 1 MORE -66 ? 1 'SSA (A^2)' 19830 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? B DC 10 ? P DC 10 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 63.3 ? 2 "O3'" ? B DC 10 ? P DC 10 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 124.6 ? 3 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 61.8 ? 4 "O3'" ? B DC 10 ? P DC 10 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 144.2 ? 5 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 97.8 ? 6 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 43.0 ? 7 "O3'" ? B DC 10 ? P DC 10 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 106.0 ? 8 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 84.5 ? 9 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 75.7 ? 10 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 101.7 ? 11 "O3'" ? B DC 10 ? P DC 10 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 86.4 ? 12 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 149.7 ? 13 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 148.0 ? 14 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 108.0 ? 15 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 NA ? H NA . ? A NA 403 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 104.9 ? 16 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 203 ? 1_555 93.6 ? 17 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 207 ? 1_555 108.4 ? 18 O ? J HOH . ? P HOH 203 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 207 ? 1_555 94.1 ? 19 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 215 ? 1_555 76.8 ? 20 O ? J HOH . ? P HOH 203 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 215 ? 1_555 82.6 ? 21 O ? J HOH . ? P HOH 207 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? J HOH . ? P HOH 215 ? 1_555 174.1 ? 22 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 85.8 ? 23 O ? J HOH . ? P HOH 203 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 165.5 ? 24 O ? J HOH . ? P HOH 207 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 99.9 ? 25 O ? J HOH . ? P HOH 215 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 83.1 ? 26 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 92.9 ? 27 O ? J HOH . ? P HOH 203 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 167.7 ? 28 O ? J HOH . ? P HOH 207 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 93.8 ? 29 O ? J HOH . ? P HOH 215 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 88.7 ? 30 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 8.2 ? 31 OP1 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 169.3 ? 32 O ? J HOH . ? P HOH 203 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 82.7 ? 33 O ? J HOH . ? P HOH 207 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 81.9 ? 34 O ? J HOH . ? P HOH 215 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 92.8 ? 35 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 95.3 ? 36 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? E MG . ? P MG 101 ? 1_555 O ? L HOH . ? A HOH 612 ? 1_555 89.1 ? 37 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 87.6 ? 38 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 77.1 ? 39 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 94.7 ? 40 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 64.0 ? 41 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 129.9 ? 42 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 A G PPV . ? A PPV 402 ? 1_555 115.7 ? 43 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 73.7 ? 44 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 142.4 ? 45 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 111.8 ? 46 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O12 B G PPV . ? A PPV 402 ? 1_555 13.2 ? 47 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 A G PPV . ? A PPV 402 ? 1_555 101.9 ? 48 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 A G PPV . ? A PPV 402 ? 1_555 170.5 ? 49 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 A G PPV . ? A PPV 402 ? 1_555 86.6 ? 50 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 A G PPV . ? A PPV 402 ? 1_555 56.9 ? 51 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 A G PPV . ? A PPV 402 ? 1_555 43.9 ? 52 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 112.6 ? 53 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 159.9 ? 54 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 89.1 ? 55 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 64.4 ? 56 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 51.2 ? 57 O32 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O32 B G PPV . ? A PPV 402 ? 1_555 10.7 ? 58 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 118.6 ? 59 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 97.1 ? 60 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 160.7 ? 61 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 67.1 ? 62 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 66.1 ? 63 O32 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 79.4 ? 64 O32 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O11 B G PPV . ? A PPV 402 ? 1_555 74.7 ? 65 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 115.9 ? 66 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 87.3 ? 67 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 166.9 ? 68 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 71.9 ? 69 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 73.0 ? 70 O32 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 89.5 ? 71 O32 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 84.8 ? 72 O11 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O21 A G PPV . ? A PPV 402 ? 1_555 10.1 ? 73 OP2 ? B 8OG 11 ? P 8OG 11 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 156.7 ? 74 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 84.7 ? 75 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 81.7 ? 76 O12 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 135.8 ? 77 O12 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 123.9 ? 78 O32 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 86.2 ? 79 O32 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 76.3 ? 80 O11 B G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 84.2 ? 81 O21 A G PPV . ? A PPV 402 ? 1_555 MG ? F MG . ? A MG 401 ? 1_555 O ? L HOH . ? A HOH 544 ? 1_555 85.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-12 2 'Structure model' 1 1 2014-12-03 3 'Structure model' 1 2 2015-02-04 4 'Structure model' 1 3 2019-11-27 5 'Structure model' 1 4 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity_src_gen 3 4 'Structure model' pdbx_audit_support 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_entity_src_syn 6 4 'Structure model' pdbx_struct_oper_list 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond 9 5 'Structure model' database_2 10 5 'Structure model' pdbx_initial_refinement_model 11 5 'Structure model' pdbx_struct_conn_angle 12 5 'Structure model' refine_hist 13 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 3 4 'Structure model' '_pdbx_database_status.pdb_format_compatible' 4 4 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag' 5 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 6 5 'Structure model' '_database_2.pdbx_DOI' 7 5 'Structure model' '_database_2.pdbx_database_accession' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_alt_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_alt_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 25 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.value' 28 5 'Structure model' '_struct_conn.pdbx_dist_value' 29 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 30 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 31 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 33 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 34 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 35 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 36 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 40 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 41 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 42 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version '(phenix.refine: 1.7_650)' _software.pdbx_ordinal 1 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_bond.auth_asym_id_1 P _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 10 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_bond.auth_asym_id_2 P _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 10 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.565 _pdbx_validate_rmsd_bond.bond_target_value 1.512 _pdbx_validate_rmsd_bond.bond_deviation 0.053 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.007 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" T DC 5 ? A "C1'" T DC 5 ? A N1 T DC 5 ? A 110.93 108.30 2.63 0.30 N 2 1 "O4'" T DC 8 ? ? "C1'" T DC 8 ? ? N1 T DC 8 ? ? 110.96 108.30 2.66 0.30 N 3 1 "O4'" T DC 16 ? ? "C1'" T DC 16 ? ? N1 T DC 16 ? ? 110.20 108.30 1.90 0.30 N 4 1 "O4'" P DG 1 ? ? "C1'" P DG 1 ? ? N9 P DG 1 ? ? 110.89 108.30 2.59 0.30 N 5 1 "O4'" P DA 5 ? ? "C1'" P DA 5 ? ? N9 P DA 5 ? ? 110.95 108.30 2.65 0.30 N 6 1 "O4'" P DC 8 ? ? "C1'" P DC 8 ? ? N1 P DC 8 ? ? 110.26 108.30 1.96 0.30 N 7 1 "O4'" P DG 9 ? ? "C1'" P DG 9 ? ? N9 P DG 9 ? ? 110.82 108.30 2.52 0.30 N 8 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 110.56 108.30 2.26 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 170 ? ? -168.48 118.88 2 1 CYS A 178 ? ? -116.48 -139.69 3 1 ASP A 190 ? ? -167.45 -165.17 4 1 LYS A 230 ? ? -162.33 116.66 5 1 ASP A 246 ? ? 71.98 -12.63 6 1 SER A 275 ? ? -68.24 -177.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 248 ? CG ? D LYS 248 CG 2 1 Y 1 A LYS 248 ? CD ? D LYS 248 CD 3 1 Y 1 A LYS 248 ? CE ? D LYS 248 CE 4 1 Y 1 A LYS 248 ? NZ ? D LYS 248 NZ 5 1 Y 1 A GLU 309 ? CG ? D GLU 309 CG 6 1 Y 1 A GLU 309 ? CD ? D GLU 309 CD 7 1 Y 1 A GLU 309 ? OE1 ? D GLU 309 OE1 8 1 Y 1 A GLU 309 ? OE2 ? D GLU 309 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 10 1 Y 1 A THR 10 ? D THR 10 11 1 Y 1 A GLY 302 ? D GLY 302 12 1 Y 1 A VAL 303 ? D VAL 303 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 DA OP3 O N N 126 DA P P N N 127 DA OP1 O N N 128 DA OP2 O N N 129 DA "O5'" O N N 130 DA "C5'" C N N 131 DA "C4'" C N R 132 DA "O4'" O N N 133 DA "C3'" C N S 134 DA "O3'" O N N 135 DA "C2'" C N N 136 DA "C1'" C N R 137 DA N9 N Y N 138 DA C8 C Y N 139 DA N7 N Y N 140 DA C5 C Y N 141 DA C6 C Y N 142 DA N6 N N N 143 DA N1 N Y N 144 DA C2 C Y N 145 DA N3 N Y N 146 DA C4 C Y N 147 DA HOP3 H N N 148 DA HOP2 H N N 149 DA "H5'" H N N 150 DA "H5''" H N N 151 DA "H4'" H N N 152 DA "H3'" H N N 153 DA "HO3'" H N N 154 DA "H2'" H N N 155 DA "H2''" H N N 156 DA "H1'" H N N 157 DA H8 H N N 158 DA H61 H N N 159 DA H62 H N N 160 DA H2 H N N 161 DC OP3 O N N 162 DC P P N N 163 DC OP1 O N N 164 DC OP2 O N N 165 DC "O5'" O N N 166 DC "C5'" C N N 167 DC "C4'" C N R 168 DC "O4'" O N N 169 DC "C3'" C N S 170 DC "O3'" O N N 171 DC "C2'" C N N 172 DC "C1'" C N R 173 DC N1 N N N 174 DC C2 C N N 175 DC O2 O N N 176 DC N3 N N N 177 DC C4 C N N 178 DC N4 N N N 179 DC C5 C N N 180 DC C6 C N N 181 DC HOP3 H N N 182 DC HOP2 H N N 183 DC "H5'" H N N 184 DC "H5''" H N N 185 DC "H4'" H N N 186 DC "H3'" H N N 187 DC "HO3'" H N N 188 DC "H2'" H N N 189 DC "H2''" H N N 190 DC "H1'" H N N 191 DC H41 H N N 192 DC H42 H N N 193 DC H5 H N N 194 DC H6 H N N 195 DG OP3 O N N 196 DG P P N N 197 DG OP1 O N N 198 DG OP2 O N N 199 DG "O5'" O N N 200 DG "C5'" C N N 201 DG "C4'" C N R 202 DG "O4'" O N N 203 DG "C3'" C N S 204 DG "O3'" O N N 205 DG "C2'" C N N 206 DG "C1'" C N R 207 DG N9 N Y N 208 DG C8 C Y N 209 DG N7 N Y N 210 DG C5 C Y N 211 DG C6 C N N 212 DG O6 O N N 213 DG N1 N N N 214 DG C2 C N N 215 DG N2 N N N 216 DG N3 N N N 217 DG C4 C Y N 218 DG HOP3 H N N 219 DG HOP2 H N N 220 DG "H5'" H N N 221 DG "H5''" H N N 222 DG "H4'" H N N 223 DG "H3'" H N N 224 DG "HO3'" H N N 225 DG "H2'" H N N 226 DG "H2''" H N N 227 DG "H1'" H N N 228 DG H8 H N N 229 DG H1 H N N 230 DG H21 H N N 231 DG H22 H N N 232 DT OP3 O N N 233 DT P P N N 234 DT OP1 O N N 235 DT OP2 O N N 236 DT "O5'" O N N 237 DT "C5'" C N N 238 DT "C4'" C N R 239 DT "O4'" O N N 240 DT "C3'" C N S 241 DT "O3'" O N N 242 DT "C2'" C N N 243 DT "C1'" C N R 244 DT N1 N N N 245 DT C2 C N N 246 DT O2 O N N 247 DT N3 N N N 248 DT C4 C N N 249 DT O4 O N N 250 DT C5 C N N 251 DT C7 C N N 252 DT C6 C N N 253 DT HOP3 H N N 254 DT HOP2 H N N 255 DT "H5'" H N N 256 DT "H5''" H N N 257 DT "H4'" H N N 258 DT "H3'" H N N 259 DT "HO3'" H N N 260 DT "H2'" H N N 261 DT "H2''" H N N 262 DT "H1'" H N N 263 DT H3 H N N 264 DT H71 H N N 265 DT H72 H N N 266 DT H73 H N N 267 DT H6 H N N 268 GLN N N N N 269 GLN CA C N S 270 GLN C C N N 271 GLN O O N N 272 GLN CB C N N 273 GLN CG C N N 274 GLN CD C N N 275 GLN OE1 O N N 276 GLN NE2 N N N 277 GLN OXT O N N 278 GLN H H N N 279 GLN H2 H N N 280 GLN HA H N N 281 GLN HB2 H N N 282 GLN HB3 H N N 283 GLN HG2 H N N 284 GLN HG3 H N N 285 GLN HE21 H N N 286 GLN HE22 H N N 287 GLN HXT H N N 288 GLU N N N N 289 GLU CA C N S 290 GLU C C N N 291 GLU O O N N 292 GLU CB C N N 293 GLU CG C N N 294 GLU CD C N N 295 GLU OE1 O N N 296 GLU OE2 O N N 297 GLU OXT O N N 298 GLU H H N N 299 GLU H2 H N N 300 GLU HA H N N 301 GLU HB2 H N N 302 GLU HB3 H N N 303 GLU HG2 H N N 304 GLU HG3 H N N 305 GLU HE2 H N N 306 GLU HXT H N N 307 GLY N N N N 308 GLY CA C N N 309 GLY C C N N 310 GLY O O N N 311 GLY OXT O N N 312 GLY H H N N 313 GLY H2 H N N 314 GLY HA2 H N N 315 GLY HA3 H N N 316 GLY HXT H N N 317 HIS N N N N 318 HIS CA C N S 319 HIS C C N N 320 HIS O O N N 321 HIS CB C N N 322 HIS CG C Y N 323 HIS ND1 N Y N 324 HIS CD2 C Y N 325 HIS CE1 C Y N 326 HIS NE2 N Y N 327 HIS OXT O N N 328 HIS H H N N 329 HIS H2 H N N 330 HIS HA H N N 331 HIS HB2 H N N 332 HIS HB3 H N N 333 HIS HD1 H N N 334 HIS HD2 H N N 335 HIS HE1 H N N 336 HIS HE2 H N N 337 HIS HXT H N N 338 HOH O O N N 339 HOH H1 H N N 340 HOH H2 H N N 341 ILE N N N N 342 ILE CA C N S 343 ILE C C N N 344 ILE O O N N 345 ILE CB C N S 346 ILE CG1 C N N 347 ILE CG2 C N N 348 ILE CD1 C N N 349 ILE OXT O N N 350 ILE H H N N 351 ILE H2 H N N 352 ILE HA H N N 353 ILE HB H N N 354 ILE HG12 H N N 355 ILE HG13 H N N 356 ILE HG21 H N N 357 ILE HG22 H N N 358 ILE HG23 H N N 359 ILE HD11 H N N 360 ILE HD12 H N N 361 ILE HD13 H N N 362 ILE HXT H N N 363 LEU N N N N 364 LEU CA C N S 365 LEU C C N N 366 LEU O O N N 367 LEU CB C N N 368 LEU CG C N N 369 LEU CD1 C N N 370 LEU CD2 C N N 371 LEU OXT O N N 372 LEU H H N N 373 LEU H2 H N N 374 LEU HA H N N 375 LEU HB2 H N N 376 LEU HB3 H N N 377 LEU HG H N N 378 LEU HD11 H N N 379 LEU HD12 H N N 380 LEU HD13 H N N 381 LEU HD21 H N N 382 LEU HD22 H N N 383 LEU HD23 H N N 384 LEU HXT H N N 385 LYS N N N N 386 LYS CA C N S 387 LYS C C N N 388 LYS O O N N 389 LYS CB C N N 390 LYS CG C N N 391 LYS CD C N N 392 LYS CE C N N 393 LYS NZ N N N 394 LYS OXT O N N 395 LYS H H N N 396 LYS H2 H N N 397 LYS HA H N N 398 LYS HB2 H N N 399 LYS HB3 H N N 400 LYS HG2 H N N 401 LYS HG3 H N N 402 LYS HD2 H N N 403 LYS HD3 H N N 404 LYS HE2 H N N 405 LYS HE3 H N N 406 LYS HZ1 H N N 407 LYS HZ2 H N N 408 LYS HZ3 H N N 409 LYS HXT H N N 410 MET N N N N 411 MET CA C N S 412 MET C C N N 413 MET O O N N 414 MET CB C N N 415 MET CG C N N 416 MET SD S N N 417 MET CE C N N 418 MET OXT O N N 419 MET H H N N 420 MET H2 H N N 421 MET HA H N N 422 MET HB2 H N N 423 MET HB3 H N N 424 MET HG2 H N N 425 MET HG3 H N N 426 MET HE1 H N N 427 MET HE2 H N N 428 MET HE3 H N N 429 MET HXT H N N 430 MG MG MG N N 431 NA NA NA N N 432 PHE N N N N 433 PHE CA C N S 434 PHE C C N N 435 PHE O O N N 436 PHE CB C N N 437 PHE CG C Y N 438 PHE CD1 C Y N 439 PHE CD2 C Y N 440 PHE CE1 C Y N 441 PHE CE2 C Y N 442 PHE CZ C Y N 443 PHE OXT O N N 444 PHE H H N N 445 PHE H2 H N N 446 PHE HA H N N 447 PHE HB2 H N N 448 PHE HB3 H N N 449 PHE HD1 H N N 450 PHE HD2 H N N 451 PHE HE1 H N N 452 PHE HE2 H N N 453 PHE HZ H N N 454 PHE HXT H N N 455 PPV O11 O N N 456 PPV P1 P N N 457 PPV O21 O N N 458 PPV O31 O N N 459 PPV OPP O N N 460 PPV P2 P N N 461 PPV O12 O N N 462 PPV O22 O N N 463 PPV O32 O N N 464 PPV H11 H N N 465 PPV H21 H N N 466 PPV H12 H N N 467 PPV H32 H N N 468 PRO N N N N 469 PRO CA C N S 470 PRO C C N N 471 PRO O O N N 472 PRO CB C N N 473 PRO CG C N N 474 PRO CD C N N 475 PRO OXT O N N 476 PRO H H N N 477 PRO HA H N N 478 PRO HB2 H N N 479 PRO HB3 H N N 480 PRO HG2 H N N 481 PRO HG3 H N N 482 PRO HD2 H N N 483 PRO HD3 H N N 484 PRO HXT H N N 485 SER N N N N 486 SER CA C N S 487 SER C C N N 488 SER O O N N 489 SER CB C N N 490 SER OG O N N 491 SER OXT O N N 492 SER H H N N 493 SER H2 H N N 494 SER HA H N N 495 SER HB2 H N N 496 SER HB3 H N N 497 SER HG H N N 498 SER HXT H N N 499 THR N N N N 500 THR CA C N S 501 THR C C N N 502 THR O O N N 503 THR CB C N R 504 THR OG1 O N N 505 THR CG2 C N N 506 THR OXT O N N 507 THR H H N N 508 THR H2 H N N 509 THR HA H N N 510 THR HB H N N 511 THR HG1 H N N 512 THR HG21 H N N 513 THR HG22 H N N 514 THR HG23 H N N 515 THR HXT H N N 516 TRP N N N N 517 TRP CA C N S 518 TRP C C N N 519 TRP O O N N 520 TRP CB C N N 521 TRP CG C Y N 522 TRP CD1 C Y N 523 TRP CD2 C Y N 524 TRP NE1 N Y N 525 TRP CE2 C Y N 526 TRP CE3 C Y N 527 TRP CZ2 C Y N 528 TRP CZ3 C Y N 529 TRP CH2 C Y N 530 TRP OXT O N N 531 TRP H H N N 532 TRP H2 H N N 533 TRP HA H N N 534 TRP HB2 H N N 535 TRP HB3 H N N 536 TRP HD1 H N N 537 TRP HE1 H N N 538 TRP HE3 H N N 539 TRP HZ2 H N N 540 TRP HZ3 H N N 541 TRP HH2 H N N 542 TRP HXT H N N 543 TYR N N N N 544 TYR CA C N S 545 TYR C C N N 546 TYR O O N N 547 TYR CB C N N 548 TYR CG C Y N 549 TYR CD1 C Y N 550 TYR CD2 C Y N 551 TYR CE1 C Y N 552 TYR CE2 C Y N 553 TYR CZ C Y N 554 TYR OH O N N 555 TYR OXT O N N 556 TYR H H N N 557 TYR H2 H N N 558 TYR HA H N N 559 TYR HB2 H N N 560 TYR HB3 H N N 561 TYR HD1 H N N 562 TYR HD2 H N N 563 TYR HE1 H N N 564 TYR HE2 H N N 565 TYR HH H N N 566 TYR HXT H N N 567 VAL N N N N 568 VAL CA C N S 569 VAL C C N N 570 VAL O O N N 571 VAL CB C N N 572 VAL CG1 C N N 573 VAL CG2 C N N 574 VAL OXT O N N 575 VAL H H N N 576 VAL H2 H N N 577 VAL HA H N N 578 VAL HB H N N 579 VAL HG11 H N N 580 VAL HG12 H N N 581 VAL HG13 H N N 582 VAL HG21 H N N 583 VAL HG22 H N N 584 VAL HG23 H N N 585 VAL HXT H N N 586 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 LEU N CA sing N N 362 LEU N H sing N N 363 LEU N H2 sing N N 364 LEU CA C sing N N 365 LEU CA CB sing N N 366 LEU CA HA sing N N 367 LEU C O doub N N 368 LEU C OXT sing N N 369 LEU CB CG sing N N 370 LEU CB HB2 sing N N 371 LEU CB HB3 sing N N 372 LEU CG CD1 sing N N 373 LEU CG CD2 sing N N 374 LEU CG HG sing N N 375 LEU CD1 HD11 sing N N 376 LEU CD1 HD12 sing N N 377 LEU CD1 HD13 sing N N 378 LEU CD2 HD21 sing N N 379 LEU CD2 HD22 sing N N 380 LEU CD2 HD23 sing N N 381 LEU OXT HXT sing N N 382 LYS N CA sing N N 383 LYS N H sing N N 384 LYS N H2 sing N N 385 LYS CA C sing N N 386 LYS CA CB sing N N 387 LYS CA HA sing N N 388 LYS C O doub N N 389 LYS C OXT sing N N 390 LYS CB CG sing N N 391 LYS CB HB2 sing N N 392 LYS CB HB3 sing N N 393 LYS CG CD sing N N 394 LYS CG HG2 sing N N 395 LYS CG HG3 sing N N 396 LYS CD CE sing N N 397 LYS CD HD2 sing N N 398 LYS CD HD3 sing N N 399 LYS CE NZ sing N N 400 LYS CE HE2 sing N N 401 LYS CE HE3 sing N N 402 LYS NZ HZ1 sing N N 403 LYS NZ HZ2 sing N N 404 LYS NZ HZ3 sing N N 405 LYS OXT HXT sing N N 406 MET N CA sing N N 407 MET N H sing N N 408 MET N H2 sing N N 409 MET CA C sing N N 410 MET CA CB sing N N 411 MET CA HA sing N N 412 MET C O doub N N 413 MET C OXT sing N N 414 MET CB CG sing N N 415 MET CB HB2 sing N N 416 MET CB HB3 sing N N 417 MET CG SD sing N N 418 MET CG HG2 sing N N 419 MET CG HG3 sing N N 420 MET SD CE sing N N 421 MET CE HE1 sing N N 422 MET CE HE2 sing N N 423 MET CE HE3 sing N N 424 MET OXT HXT sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PPV O11 P1 sing N N 449 PPV O11 H11 sing N N 450 PPV P1 O21 sing N N 451 PPV P1 O31 doub N N 452 PPV P1 OPP sing N N 453 PPV O21 H21 sing N N 454 PPV OPP P2 sing N N 455 PPV P2 O12 sing N N 456 PPV P2 O22 doub N N 457 PPV P2 O32 sing N N 458 PPV O12 H12 sing N N 459 PPV O32 H32 sing N N 460 PRO N CA sing N N 461 PRO N CD sing N N 462 PRO N H sing N N 463 PRO CA C sing N N 464 PRO CA CB sing N N 465 PRO CA HA sing N N 466 PRO C O doub N N 467 PRO C OXT sing N N 468 PRO CB CG sing N N 469 PRO CB HB2 sing N N 470 PRO CB HB3 sing N N 471 PRO CG CD sing N N 472 PRO CG HG2 sing N N 473 PRO CG HG3 sing N N 474 PRO CD HD2 sing N N 475 PRO CD HD3 sing N N 476 PRO OXT HXT sing N N 477 SER N CA sing N N 478 SER N H sing N N 479 SER N H2 sing N N 480 SER CA C sing N N 481 SER CA CB sing N N 482 SER CA HA sing N N 483 SER C O doub N N 484 SER C OXT sing N N 485 SER CB OG sing N N 486 SER CB HB2 sing N N 487 SER CB HB3 sing N N 488 SER OG HG sing N N 489 SER OXT HXT sing N N 490 THR N CA sing N N 491 THR N H sing N N 492 THR N H2 sing N N 493 THR CA C sing N N 494 THR CA CB sing N N 495 THR CA HA sing N N 496 THR C O doub N N 497 THR C OXT sing N N 498 THR CB OG1 sing N N 499 THR CB CG2 sing N N 500 THR CB HB sing N N 501 THR OG1 HG1 sing N N 502 THR CG2 HG21 sing N N 503 THR CG2 HG22 sing N N 504 THR CG2 HG23 sing N N 505 THR OXT HXT sing N N 506 TRP N CA sing N N 507 TRP N H sing N N 508 TRP N H2 sing N N 509 TRP CA C sing N N 510 TRP CA CB sing N N 511 TRP CA HA sing N N 512 TRP C O doub N N 513 TRP C OXT sing N N 514 TRP CB CG sing N N 515 TRP CB HB2 sing N N 516 TRP CB HB3 sing N N 517 TRP CG CD1 doub Y N 518 TRP CG CD2 sing Y N 519 TRP CD1 NE1 sing Y N 520 TRP CD1 HD1 sing N N 521 TRP CD2 CE2 doub Y N 522 TRP CD2 CE3 sing Y N 523 TRP NE1 CE2 sing Y N 524 TRP NE1 HE1 sing N N 525 TRP CE2 CZ2 sing Y N 526 TRP CE3 CZ3 doub Y N 527 TRP CE3 HE3 sing N N 528 TRP CZ2 CH2 doub Y N 529 TRP CZ2 HZ2 sing N N 530 TRP CZ3 CH2 sing Y N 531 TRP CZ3 HZ3 sing N N 532 TRP CH2 HH2 sing N N 533 TRP OXT HXT sing N N 534 TYR N CA sing N N 535 TYR N H sing N N 536 TYR N H2 sing N N 537 TYR CA C sing N N 538 TYR CA CB sing N N 539 TYR CA HA sing N N 540 TYR C O doub N N 541 TYR C OXT sing N N 542 TYR CB CG sing N N 543 TYR CB HB2 sing N N 544 TYR CB HB3 sing N N 545 TYR CG CD1 doub Y N 546 TYR CG CD2 sing Y N 547 TYR CD1 CE1 sing Y N 548 TYR CD1 HD1 sing N N 549 TYR CD2 CE2 doub Y N 550 TYR CD2 HD2 sing N N 551 TYR CE1 CZ doub Y N 552 TYR CE1 HE1 sing N N 553 TYR CE2 CZ sing Y N 554 TYR CE2 HE2 sing N N 555 TYR CZ OH sing N N 556 TYR OH HH sing N N 557 TYR OXT HXT sing N N 558 VAL N CA sing N N 559 VAL N H sing N N 560 VAL N H2 sing N N 561 VAL CA C sing N N 562 VAL CA CB sing N N 563 VAL CA HA sing N N 564 VAL C O doub N N 565 VAL C OXT sing N N 566 VAL CB CG1 sing N N 567 VAL CB CG2 sing N N 568 VAL CB HB sing N N 569 VAL CG1 HG11 sing N N 570 VAL CG1 HG12 sing N N 571 VAL CG1 HG13 sing N N 572 VAL CG2 HG21 sing N N 573 VAL CG2 HG22 sing N N 574 VAL CG2 HG23 sing N N 575 VAL OXT HXT sing N N 576 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4UB3 'double helix' 4UB3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 -0.460 -0.081 0.135 -5.343 -11.750 7.570 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 1.415 -0.657 0.495 -4.183 -7.123 3.472 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 -1.140 -0.348 -0.089 -7.163 -12.837 4.894 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 0.020 0.370 0.392 5.176 -5.932 3.381 4 T_DA4:DT2_D T 4 ? D 2 ? ? ? 1 A DC 5 1_555 C DG 1 1_555 -0.166 0.117 -0.791 18.929 1.224 -3.312 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DC 6 1_555 B 8OG 11 1_555 0.376 -0.116 0.307 -13.817 6.202 -2.265 6 T_DC6:8OG11_P T 6 ? P 11 ? 19 1 1 A DG 7 1_555 B DC 10 1_555 -0.248 -0.138 0.263 8.741 -3.099 -1.328 7 T_DG7:DC10_P T 7 ? P 10 ? 19 1 1 A DC 8 1_555 B DG 9 1_555 0.210 -0.305 -0.516 17.895 -10.876 -3.186 8 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 -0.256 -0.370 -0.042 3.972 -3.088 -3.409 9 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.288 -0.243 0.011 4.750 -3.799 -3.459 10 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 0.044 -0.068 0.274 2.201 -10.895 3.832 11 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 A DT 12 1_555 B DA 5 1_555 0.151 -0.232 0.156 2.760 -11.414 1.902 12 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.967 -0.326 -0.337 2.312 -12.738 3.685 13 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 0.078 -0.233 -0.109 -4.351 -13.758 -2.870 14 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 -0.143 -0.333 0.292 5.706 -8.893 -0.413 15 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 0.220 -0.312 0.066 3.014 -5.342 -2.662 16 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 -0.161 1.316 3.410 -2.899 5.695 44.252 1.175 -0.072 3.548 7.513 3.825 44.688 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 -0.146 1.114 3.429 0.049 -0.104 30.133 2.164 0.291 3.425 -0.201 -0.093 30.133 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.025 0.441 3.086 -4.370 0.266 34.467 0.701 -0.590 3.069 0.447 7.338 34.735 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.552 -0.355 3.117 9.564 -0.771 25.979 -0.557 1.132 3.128 -1.645 -20.409 27.666 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DC 6 1_555 B 8OG 11 1_555 A DG 7 1_555 B DC 10 1_555 -0.103 -0.639 2.709 -0.558 11.125 17.821 -5.405 0.099 1.970 32.153 1.612 20.992 5 TT_DC6DG7:DC108OG11_PP T 6 ? P 11 ? T 7 ? P 10 ? 1 A DG 7 1_555 B DC 10 1_555 A DC 8 1_555 B DG 9 1_555 0.397 -0.676 3.191 5.212 3.664 32.302 -1.802 0.165 3.122 6.507 -9.256 32.908 6 TT_DG7DC8:DG9DC10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.076 -0.268 3.728 -5.457 9.639 36.837 -1.796 0.850 3.664 14.847 8.405 38.411 7 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 -0.519 -0.595 3.457 -1.350 3.879 32.361 -1.768 0.678 3.383 6.925 2.411 32.614 8 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 0.235 -0.387 3.176 -1.604 5.568 36.984 -1.307 -0.568 3.075 8.712 2.510 37.419 9 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 -0.017 -0.732 3.293 0.226 0.317 30.457 -1.457 0.077 3.285 0.603 -0.430 30.459 10 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 0.308 0.236 3.223 7.359 4.542 41.933 -0.130 0.313 3.237 6.267 -10.154 42.776 11 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.679 0.150 3.440 -1.721 11.003 28.808 -2.007 0.919 3.308 21.144 3.306 30.844 12 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.482 -0.095 3.056 -4.225 5.261 30.024 -1.129 -1.672 2.904 9.997 8.029 30.756 13 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 0.176 -0.529 3.273 0.778 3.534 35.553 -1.369 -0.176 3.210 5.770 -1.271 35.731 14 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES050158 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES050161 2 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES043010 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 PYROPHOSPHATE PPV 7 'SODIUM ION' NA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMS _pdbx_initial_refinement_model.details 'PDB entry 2FMS' #