HEADER TRANSLATION 16-DEC-14 4UE8 TITLE COMPLEX OF D. MELANOGASTER EIF4E WITH THE 4E BINDING PROTEIN THOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 80-259; COMPND 5 SYNONYM: EIF4E, EIF-4F 25 KDA SUBUNIT, MRNA CAP-BINDING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 4E-BINDING PROTEIN THOR; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 50-83; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETMCN (PNEA); SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 13 ORGANISM_COMMON: FRUIT FLY; SOURCE 14 ORGANISM_TAXID: 7227; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PETMCN (PNEA) KEYWDS TRANSLATION, GENE REGULATION, CAP BINDING PROTEIN, 4E BINDING KEYWDS 2 PROTEIN, TRANSLATIONAL REPRESSION EXPDTA X-RAY DIFFRACTION AUTHOR D.PETER,O.WEICHENRIEDER REVDAT 4 20-DEC-23 4UE8 1 REMARK LINK REVDAT 3 15-APR-15 4UE8 1 JRNL REVDAT 2 04-MAR-15 4UE8 1 JRNL REVDAT 1 25-FEB-15 4UE8 0 JRNL AUTH D.PETER,C.IGREJA,R.WEBER,L.WOHLBOLD,C.WEILER,L.EBERTSCH, JRNL AUTH 2 O.WEICHENRIEDER,E.IZAURRALDE JRNL TITL MOLECULAR ARCHITECTURE OF 4E-BP TRANSLATIONAL INHIBITORS JRNL TITL 2 BOUND TO EIF4E. JRNL REF MOL.CELL V. 57 1074 2015 JRNL REFN ISSN 1097-2765 JRNL PMID 25702871 JRNL DOI 10.1016/J.MOLCEL.2015.01.017 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 70121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6653 - 3.2156 0.99 2812 146 0.1641 0.1668 REMARK 3 2 3.2156 - 2.5525 1.00 2763 157 0.1680 0.1723 REMARK 3 3 2.5525 - 2.2299 0.99 2723 180 0.1562 0.1785 REMARK 3 4 2.2299 - 2.0261 0.99 2788 153 0.1404 0.1510 REMARK 3 5 2.0261 - 1.8809 1.00 2763 157 0.1331 0.1461 REMARK 3 6 1.8809 - 1.7700 1.00 2751 147 0.1399 0.1677 REMARK 3 7 1.7700 - 1.6813 0.99 2752 145 0.1281 0.1432 REMARK 3 8 1.6813 - 1.6081 1.00 2800 127 0.1180 0.1384 REMARK 3 9 1.6081 - 1.5462 0.99 2736 154 0.1169 0.1489 REMARK 3 10 1.5462 - 1.4929 0.98 2725 171 0.1187 0.1491 REMARK 3 11 1.4929 - 1.4462 0.98 2714 132 0.1225 0.1575 REMARK 3 12 1.4462 - 1.4048 0.96 2678 133 0.1172 0.1591 REMARK 3 13 1.4048 - 1.3679 0.97 2657 141 0.1202 0.1611 REMARK 3 14 1.3679 - 1.3345 0.95 2662 136 0.1197 0.1522 REMARK 3 15 1.3345 - 1.3042 0.94 2618 131 0.1208 0.1411 REMARK 3 16 1.3042 - 1.2764 0.93 2536 124 0.1247 0.1607 REMARK 3 17 1.2764 - 1.2509 0.94 2650 128 0.1257 0.1633 REMARK 3 18 1.2509 - 1.2273 0.95 2609 148 0.1258 0.1646 REMARK 3 19 1.2273 - 1.2053 0.94 2608 135 0.1347 0.1463 REMARK 3 20 1.2053 - 1.1849 0.94 2586 140 0.1351 0.1472 REMARK 3 21 1.1849 - 1.1658 0.93 2595 139 0.1350 0.1698 REMARK 3 22 1.1658 - 1.1479 0.93 2546 147 0.1337 0.1553 REMARK 3 23 1.1479 - 1.1310 0.92 2569 124 0.1460 0.1634 REMARK 3 24 1.1310 - 1.1150 0.92 2516 135 0.1538 0.1542 REMARK 3 25 1.1150 - 1.1000 0.86 2409 125 0.1704 0.1836 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1705 REMARK 3 ANGLE : 1.168 2315 REMARK 3 CHIRALITY : 0.076 251 REMARK 3 PLANARITY : 0.005 294 REMARK 3 DIHEDRAL : 12.715 658 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE REFINED IN THE RIDING REMARK 3 POSITIONS. NON-WATER ATOMS WERE REFINED WITH INDIVIDUAL REMARK 3 ANISOTROPIC B-FACTORS. THE FOLLOWING RESIDUES WERE MODELED AS REMARK 3 DOUBLE CONFORMATIONS. CHAIN A, RESIDUES 73, 122, 156, 177, 193, REMARK 3 225. CHAIN B, RESIDUE 61. THE FOLLOWING RESIDUES ARE DISORDERED. REMARK 3 CHAIN A, RESIDUES 84 TO 90, 235 TO 248. REMARK 4 REMARK 4 4UE8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1290062488. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : DYNAMICALLY BENDABLE MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70124 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 36.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AXG CHAIN A REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M KNO3, 0.5% N-OCTYL-BETA-D REMARK 280 -GLUCOSIDE, 18% PEG3350, PH 7.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.64500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 65 REMARK 465 ASP A 84 REMARK 465 ARG A 85 REMARK 465 SER A 86 REMARK 465 LYS A 87 REMARK 465 SER A 88 REMARK 465 TRP A 89 REMARK 465 GLU A 90 REMARK 465 MET A 235 REMARK 465 VAL A 236 REMARK 465 LYS A 237 REMARK 465 GLN A 238 REMARK 465 GLY A 239 REMARK 465 SER A 240 REMARK 465 ASN A 241 REMARK 465 VAL A 242 REMARK 465 LYS A 243 REMARK 465 SER A 244 REMARK 465 ILE A 245 REMARK 465 TYR A 246 REMARK 465 THR A 247 REMARK 465 LEU A 248 REMARK 465 GLY B 46 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 204 O HOH A 2114 2555 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 96 -68.06 -94.92 REMARK 500 ASP A 100 19.54 -145.97 REMARK 500 PRO A 133 47.63 -77.89 REMARK 500 ASN B 74 31.86 -96.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2027 DISTANCE = 6.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1236 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 160 OD1 REMARK 620 2 HOH A2112 O 127.0 REMARK 620 3 HOH A2114 O 105.2 124.2 REMARK 620 4 HOH A2160 O 137.3 66.8 89.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1235 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 178 OD2 REMARK 620 2 ASP A 178 OD1 51.1 REMARK 620 N 1 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1236 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UE9 RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF-4E WITH THE 4E BINDING PROTEIN 4E-T REMARK 900 RELATED ID: 4UEA RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF-4E WITH A DESIGNED 4E BINDING REMARK 900 PROTEIN (FORM I) REMARK 900 RELATED ID: 4UEB RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF-4E WITH A DESIGNED 4E BINDING REMARK 900 PROTEIN (FORM II) REMARK 900 RELATED ID: 4UEC RELATED DB: PDB REMARK 900 COMPLEX OF D. MELANOGASTER EIF-4E WITH EIF-4G AND CAP ANALOG REMARK 900 RELATED ID: 4UED RELATED DB: PDB REMARK 900 COMPLEX OF HUMAN EIF-4E WITH THE 4E BINDING PROTEIN 4E-BP1 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST FOUR RESIDUES OF CHAIN A REMAIN FROM THE REMARK 999 EXPRESSION TAG. REMARK 999 COMPARED TO UNP P48598, SEQUENCE NUMBERS OF CHAIN A ARE SHIFTED REMARK 999 BY -11 RESIDUES. NUMBERING CORRESPONDS TO UNP P48598-2 AND PDB 4AXG. REMARK 999 THE FIRST FOUR RESIDUES OF CHAIN B REMAIN FROM THE REMARK 999 EXPRESSION TAG. DBREF 4UE8 A 69 248 UNP P48598 IF4E_DROME 80 259 DBREF 4UE8 B 50 83 UNP Q9XZ56 Q9XZ56_DROME 50 83 SEQADV 4UE8 GLY A 65 UNP P48598 EXPRESSION TAG SEQADV 4UE8 PRO A 66 UNP P48598 EXPRESSION TAG SEQADV 4UE8 HIS A 67 UNP P48598 EXPRESSION TAG SEQADV 4UE8 MET A 68 UNP P48598 EXPRESSION TAG SEQADV 4UE8 GLY B 46 UNP Q9XZ56 EXPRESSION TAG SEQADV 4UE8 PRO B 47 UNP Q9XZ56 EXPRESSION TAG SEQADV 4UE8 HIS B 48 UNP Q9XZ56 EXPRESSION TAG SEQADV 4UE8 MET B 49 UNP Q9XZ56 EXPRESSION TAG SEQRES 1 A 184 GLY PRO HIS MET LYS HIS PRO LEU MET ASN VAL TRP THR SEQRES 2 A 184 LEU TRP TYR LEU GLU ASN ASP ARG SER LYS SER TRP GLU SEQRES 3 A 184 ASP MET GLN ASN GLU ILE THR SER PHE ASP THR VAL GLU SEQRES 4 A 184 ASP PHE TRP SER LEU TYR ASN HIS ILE LYS PRO PRO SER SEQRES 5 A 184 GLU ILE LYS LEU GLY SER ASP TYR SER LEU PHE LYS LYS SEQRES 6 A 184 ASN ILE ARG PRO MET TRP GLU ASP ALA ALA ASN LYS GLN SEQRES 7 A 184 GLY GLY ARG TRP VAL ILE THR LEU ASN LYS SER SER LYS SEQRES 8 A 184 THR ASP LEU ASP ASN LEU TRP LEU ASP VAL LEU LEU CYS SEQRES 9 A 184 LEU ILE GLY GLU ALA PHE ASP HIS SER ASP GLN ILE CYS SEQRES 10 A 184 GLY ALA VAL ILE ASN ILE ARG GLY LYS SER ASN LYS ILE SEQRES 11 A 184 SER ILE TRP THR ALA ASP GLY ASN ASN GLU GLU ALA ALA SEQRES 12 A 184 LEU GLU ILE GLY HIS LYS LEU ARG ASP ALA LEU ARG LEU SEQRES 13 A 184 GLY ARG ASN ASN SER LEU GLN TYR GLN LEU HIS LYS ASP SEQRES 14 A 184 THR MET VAL LYS GLN GLY SER ASN VAL LYS SER ILE TYR SEQRES 15 A 184 THR LEU SEQRES 1 B 38 GLY PRO HIS MET THR LYS LEU ILE TYR GLU ARG ALA PHE SEQRES 2 B 38 MET LYS ASN LEU ARG GLY SER PRO LEU SER GLN THR PRO SEQRES 3 B 38 PRO SER ASN VAL PRO SER CYS LEU LEU ARG GLY THR HET NA A1235 1 HET NA A1236 1 HET P4G B1084 29 HETNAM NA SODIUM ION HETNAM P4G 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE FORMUL 3 NA 2(NA 1+) FORMUL 5 P4G C8 H18 O3 FORMUL 6 HOH *191(H2 O) HELIX 1 1 VAL A 102 HIS A 111 1 10 HELIX 2 2 LYS A 155 ILE A 170 1 16 HELIX 3 3 GLU A 204 LEU A 218 1 15 HELIX 4 4 ARG B 56 LEU B 62 1 7 SHEET 1 AA 7 ASN A 94 THR A 101 0 SHEET 2 AA 7 PRO A 71 LEU A 81 -1 N LEU A 72 O ASP A 100 SHEET 3 AA 7 ASP A 123 LYS A 128 -1 O ASP A 123 N LEU A 81 SHEET 4 AA 7 ILE A 180 ARG A 188 -1 O CYS A 181 N LYS A 128 SHEET 5 AA 7 SER A 191 THR A 198 -1 O SER A 191 N ARG A 188 SHEET 6 AA 7 GLY A 144 ASN A 151 -1 O GLY A 144 N THR A 198 SHEET 7 AA 7 GLN A 227 LEU A 230 -1 O GLN A 227 N VAL A 147 LINK OD1 ASN A 160 NA NA A1236 1555 1555 2.16 LINK OD2 ASP A 178 NA NA A1235 1555 1555 2.38 LINK OD1 ASP A 178 NA NA A1235 1555 1555 2.69 LINK NA NA A1236 O HOH A2112 1555 1555 2.66 LINK NA NA A1236 O HOH A2114 1555 1555 2.41 LINK NA NA A1236 O HOH A2160 1555 1555 3.16 SITE 1 AC1 2 HIS A 176 ASP A 178 SITE 1 AC2 3 ASN A 160 HOH A2112 HOH A2114 CRYST1 35.450 73.290 38.260 90.00 112.49 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028209 0.000000 0.011679 0.00000 SCALE2 0.000000 0.013644 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028288 0.00000