HEADER TRANSFERASE/INHIBITOR 07-APR-15 4UJ2 TITLE PROTEIN KINASE A IN COMPLEX WITH AN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 6-25; COMPND 11 SYNONYM: PKI-ALPHA, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 12 MUSCLE/BRAIN ISOFORM; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS TRANSFERASE-INHIBITOR COMPLEX, PROTEIN KINASE A EXPDTA X-RAY DIFFRACTION AUTHOR K.A.ALAM,R.A.ENGH REVDAT 4 10-JAN-24 4UJ2 1 REMARK LINK REVDAT 3 06-FEB-19 4UJ2 1 REMARK REVDAT 2 30-JAN-19 4UJ2 1 REMARK REVDAT 1 13-APR-16 4UJ2 0 JRNL AUTH B.S.LAUBER,L.A.HARDEGGER,A.K.ASRAFUL,B.A.LUND,O.DUMELE, JRNL AUTH 2 M.HARDER,B.KUHN,R.A.ENGH,F.DIEDERICH JRNL TITL ADDRESSING THE GLYCINE-RICH LOOP OF PROTEIN KINASES BY A JRNL TITL 2 MULTI-FACETTED INTERACTION NETWORK: INHIBITION OF PKA AND A JRNL TITL 3 PKB MIMIC. JRNL REF CHEMISTRY V. 22 211 2016 JRNL REFN ISSN 0947-6539 JRNL PMID 26578105 JRNL DOI 10.1002/CHEM.201503552 REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 25817 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3412 - 4.8631 0.84 1714 139 0.1596 0.1931 REMARK 3 2 4.8631 - 3.8607 0.87 1683 148 0.1313 0.1729 REMARK 3 3 3.8607 - 3.3729 0.89 1692 144 0.1461 0.1811 REMARK 3 4 3.3729 - 3.0646 0.89 1692 137 0.1598 0.2095 REMARK 3 5 3.0646 - 2.8450 0.90 1710 147 0.1682 0.2212 REMARK 3 6 2.8450 - 2.6773 0.90 1677 149 0.1714 0.2630 REMARK 3 7 2.6773 - 2.5432 0.90 1695 141 0.1623 0.2168 REMARK 3 8 2.5432 - 2.4325 0.92 1729 139 0.1628 0.2217 REMARK 3 9 2.4325 - 2.3389 0.92 1703 143 0.1729 0.2316 REMARK 3 10 2.3389 - 2.2582 0.92 1710 140 0.1747 0.2190 REMARK 3 11 2.2582 - 2.1876 0.91 1724 139 0.2025 0.2553 REMARK 3 12 2.1876 - 2.1251 0.93 1702 157 0.2003 0.2492 REMARK 3 13 2.1251 - 2.0691 0.92 1700 138 0.2126 0.2664 REMARK 3 14 2.0691 - 2.0186 0.91 1690 135 0.2477 0.3174 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3023 REMARK 3 ANGLE : 1.029 4093 REMARK 3 CHIRALITY : 0.070 432 REMARK 3 PLANARITY : 0.004 520 REMARK 3 DIHEDRAL : 13.866 1121 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1622 11.4649 9.0056 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.4869 REMARK 3 T33: 0.4082 T12: -0.0274 REMARK 3 T13: -0.0157 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 0.8177 L22: 3.1034 REMARK 3 L33: 3.9404 L12: 0.5007 REMARK 3 L13: -0.2799 L23: 0.2996 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: -0.0156 S13: 0.1911 REMARK 3 S21: 0.2882 S22: -0.1328 S23: -0.4711 REMARK 3 S31: 0.0101 S32: 0.5316 S33: 0.1447 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0022 19.7317 -0.0731 REMARK 3 T TENSOR REMARK 3 T11: 0.2317 T22: 0.2735 REMARK 3 T33: 0.3373 T12: -0.0246 REMARK 3 T13: -0.0122 T23: 0.0738 REMARK 3 L TENSOR REMARK 3 L11: 5.0559 L22: 1.5738 REMARK 3 L33: 3.8581 L12: 0.8130 REMARK 3 L13: -1.3706 L23: 0.7721 REMARK 3 S TENSOR REMARK 3 S11: -0.1498 S12: 0.4059 S13: 0.2116 REMARK 3 S21: -0.0496 S22: 0.1520 S23: -0.1054 REMARK 3 S31: -0.2230 S32: 0.1017 S33: -0.0081 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7908 12.2248 9.2678 REMARK 3 T TENSOR REMARK 3 T11: 0.2495 T22: 0.3371 REMARK 3 T33: 0.3092 T12: -0.0208 REMARK 3 T13: -0.0380 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.4664 L22: 3.4113 REMARK 3 L33: 2.8262 L12: 0.4951 REMARK 3 L13: -0.3338 L23: 0.3499 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: -0.0734 S13: 0.2950 REMARK 3 S21: 0.0517 S22: 0.0495 S23: -0.1849 REMARK 3 S31: 0.0269 S32: 0.3945 S33: -0.0378 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7600 4.5983 -7.3459 REMARK 3 T TENSOR REMARK 3 T11: 0.1833 T22: 0.3468 REMARK 3 T33: 0.2743 T12: 0.0195 REMARK 3 T13: 0.0381 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 0.8382 L22: 3.3258 REMARK 3 L33: 2.8705 L12: 0.2075 REMARK 3 L13: 0.0394 L23: 1.8154 REMARK 3 S TENSOR REMARK 3 S11: -0.0824 S12: 0.1859 S13: 0.0576 REMARK 3 S21: -0.0892 S22: 0.1350 S23: -0.0996 REMARK 3 S31: 0.2202 S32: 0.3071 S33: -0.0499 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1830 -3.6693 1.5181 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.3002 REMARK 3 T33: 0.2561 T12: 0.1052 REMARK 3 T13: 0.0187 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 1.2495 L22: 1.9104 REMARK 3 L33: 2.2362 L12: 0.0642 REMARK 3 L13: 0.0413 L23: 1.0636 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: 0.0934 S13: -0.1642 REMARK 3 S21: 0.0874 S22: -0.0568 S23: -0.3040 REMARK 3 S31: 0.5077 S32: 0.3850 S33: -0.0030 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2754 -4.3486 4.7428 REMARK 3 T TENSOR REMARK 3 T11: 0.2712 T22: 0.2310 REMARK 3 T33: 0.2161 T12: -0.0347 REMARK 3 T13: 0.0556 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 1.1906 L22: 1.5239 REMARK 3 L33: 3.3939 L12: 0.0819 REMARK 3 L13: -0.2274 L23: 1.4578 REMARK 3 S TENSOR REMARK 3 S11: -0.0719 S12: 0.0136 S13: -0.0067 REMARK 3 S21: 0.2221 S22: -0.1761 S23: 0.1546 REMARK 3 S31: 0.6299 S32: -0.2050 S33: 0.2137 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9518 -15.2607 1.0986 REMARK 3 T TENSOR REMARK 3 T11: 0.6563 T22: 0.2969 REMARK 3 T33: 0.3217 T12: 0.1628 REMARK 3 T13: 0.0362 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.5059 L22: 1.0864 REMARK 3 L33: 1.9911 L12: -0.3184 REMARK 3 L13: 0.1212 L23: 0.1136 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.0480 S13: -0.4589 REMARK 3 S21: 0.0767 S22: 0.0711 S23: -0.2460 REMARK 3 S31: 1.3212 S32: 0.2353 S33: 0.0641 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1851 20.4545 -1.2289 REMARK 3 T TENSOR REMARK 3 T11: 0.2311 T22: 0.3349 REMARK 3 T33: 0.4125 T12: -0.0400 REMARK 3 T13: -0.0230 T23: 0.0691 REMARK 3 L TENSOR REMARK 3 L11: 0.6698 L22: 2.8422 REMARK 3 L33: 2.9107 L12: 0.7248 REMARK 3 L13: 0.0323 L23: 0.3206 REMARK 3 S TENSOR REMARK 3 S11: -0.0401 S12: 0.0412 S13: 0.2472 REMARK 3 S21: -0.0934 S22: 0.1133 S23: -0.0955 REMARK 3 S31: -0.6215 S32: 0.3825 S33: -0.0986 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7009 -8.4527 -15.5406 REMARK 3 T TENSOR REMARK 3 T11: 0.2799 T22: 0.3347 REMARK 3 T33: 0.2580 T12: -0.0055 REMARK 3 T13: 0.0263 T23: 0.0247 REMARK 3 L TENSOR REMARK 3 L11: 2.3089 L22: 3.5228 REMARK 3 L33: 5.5715 L12: 0.0219 REMARK 3 L13: 1.2255 L23: 4.1681 REMARK 3 S TENSOR REMARK 3 S11: 0.2515 S12: 0.1520 S13: -0.3273 REMARK 3 S21: 0.2950 S22: -0.2817 S23: -0.1846 REMARK 3 S31: 0.4534 S32: -0.2741 S33: 0.0275 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7021 3.3488 -3.9911 REMARK 3 T TENSOR REMARK 3 T11: 0.4320 T22: 0.2336 REMARK 3 T33: 0.3061 T12: 0.0061 REMARK 3 T13: 0.0353 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 7.8214 L22: 3.3338 REMARK 3 L33: 6.1647 L12: 1.0687 REMARK 3 L13: -1.2138 L23: -1.6911 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.1214 S13: 0.3010 REMARK 3 S21: 0.6066 S22: 0.1867 S23: 0.2683 REMARK 3 S31: -0.1965 S32: -0.2680 S33: -0.0098 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-APR-15. REMARK 100 THE DEPOSITION ID IS D_1290063554. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25822 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 43.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 4.010 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.3300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.67000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3VQH REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10MG/ML PROTEIN, 25MM BISTRIS/MES REMARK 280 PH6.9, 50MM KCL, 1.5MM OCTANOYL-N-METHYLGLUCAMIDE, 1MM PROTEIN REMARK 280 KINASE INHIBITOR PEPTIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.90650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.56550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.37300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.56550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.90650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.37300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 ASN A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 LYS A 8 REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 GLN A 12 REMARK 465 GLU A 13 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLN A 176 CG CD OE1 NE2 REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 LYS A 295 CG CD CE NZ REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2085 O HOH B 2010 2555 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 47 141.86 -170.97 REMARK 500 ASP A 166 40.48 -149.74 REMARK 500 THR A 183 -160.40 -125.67 REMARK 500 LEU A 273 44.91 -84.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 PHOSPHOSERINE (SEP): PHOSPHORYLATION REMARK 600 (4S)-2-METHYL-2,4-PENTANEDIOL (MPD): MPD REMARK 600 PHOSPHOTHREONINE (TPO): PHOSPHORYLATION REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NVV A 1351 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NVV A 1351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1352 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UJ1 RELATED DB: PDB REMARK 900 PKA INHIBITOR COMPLEX REMARK 900 RELATED ID: 4UJ9 RELATED DB: PDB REMARK 900 PROTEIN KINASE A IN COMPLEX WITH AN INHIBITOR REMARK 900 RELATED ID: 4UJA RELATED DB: PDB REMARK 900 PROTEIN KINASE A IN COMPLEX WITH AN INHIBITOR REMARK 900 RELATED ID: 4UJB RELATED DB: PDB REMARK 900 PROTEIN KINASE A IN COMPLEX WITH AN INHIBITOR DBREF 4UJ2 A 0 350 UNP P17612 KAPCA_HUMAN 1 351 DBREF 4UJ2 B 5 24 UNP P61925 IPKA_HUMAN 6 25 SEQRES 1 A 351 MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SER GLU GLN SEQRES 2 A 351 GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS GLU ASP SEQRES 3 A 351 PHE LEU LYS LYS TRP GLU SER PRO ALA GLN ASN THR ALA SEQRES 4 A 351 HIS LEU ASP GLN PHE GLU ARG ILE LYS THR LEU GLY THR SEQRES 5 A 351 GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS LYS GLU SEQRES 6 A 351 THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP LYS GLN SEQRES 7 A 351 LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR LEU ASN SEQRES 8 A 351 GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO PHE LEU SEQRES 9 A 351 VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER ASN LEU SEQRES 10 A 351 TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU MET PHE SEQRES 11 A 351 SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU PRO HIS SEQRES 12 A 351 ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR PHE GLU SEQRES 13 A 351 TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP LEU LYS SEQRES 14 A 351 PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR ILE GLN SEQRES 15 A 351 VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS GLY ARG SEQRES 16 A 351 THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU ALA PRO SEQRES 17 A 351 GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA VAL ASP SEQRES 18 A 351 TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET ALA ALA SEQRES 19 A 351 GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE GLN ILE SEQRES 20 A 351 TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE PRO SER SEQRES 21 A 351 HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG ASN LEU SEQRES 22 A 351 LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN LEU LYS SEQRES 23 A 351 ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP PHE ALA SEQRES 24 A 351 THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS VAL GLU SEQRES 25 A 351 ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY ASP THR SEQRES 26 A 351 SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE ARG VAL SEQRES 27 A 351 SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE SER GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 4UJ2 TPO A 197 THR PHOSPHOTHREONINE MODRES 4UJ2 SEP A 338 SER PHOSPHOSERINE HET TPO A 197 11 HET SEP A 338 10 HET NVV A1351 25 HET MPD A1352 22 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM NVV 7-[(3S,4R)-4-(3-IODANYLPHENYL)CARBONYLPYRROLIDIN-3-YL]- HETNAM 2 NVV 3H-QUINAZOLIN-4-ONE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 TPO C4 H10 N O6 P FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 NVV C19 H16 I N3 O2 FORMUL 4 MPD C6 H14 O2 FORMUL 5 HOH *187(H2 O) HELIX 1 1 SER A 14 SER A 32 1 19 HELIX 2 2 HIS A 39 ASP A 41 5 3 HELIX 3 3 LYS A 76 LEU A 82 1 7 HELIX 4 4 GLN A 84 GLN A 96 1 13 HELIX 5 5 GLU A 127 GLY A 136 1 10 HELIX 6 6 SER A 139 LEU A 160 1 22 HELIX 7 7 LYS A 168 GLU A 170 5 3 HELIX 8 8 ASP A 184 ALA A 188 5 5 HELIX 9 9 THR A 201 LEU A 205 5 5 HELIX 10 10 ALA A 206 LEU A 211 1 6 HELIX 11 11 LYS A 217 GLY A 234 1 18 HELIX 12 12 GLN A 242 VAL A 251 1 10 HELIX 13 13 SER A 262 LEU A 273 1 12 HELIX 14 14 VAL A 288 ASN A 293 1 6 HELIX 15 15 HIS A 294 ALA A 298 5 5 HELIX 16 16 ASP A 301 GLN A 307 1 7 HELIX 17 17 GLY A 344 SER A 348 5 5 HELIX 18 18 THR B 5 ALA B 12 1 8 SHEET 1 AA 5 PHE A 43 GLY A 52 0 SHEET 2 AA 5 GLY A 55 HIS A 62 -1 O GLY A 55 N GLY A 52 SHEET 3 AA 5 HIS A 68 ASP A 75 -1 O TYR A 69 N VAL A 60 SHEET 4 AA 5 ASN A 115 GLU A 121 -1 O LEU A 116 N LEU A 74 SHEET 5 AA 5 LEU A 106 LYS A 111 -1 N GLU A 107 O VAL A 119 SHEET 1 AB 2 LEU A 162 ILE A 163 0 SHEET 2 AB 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AC 2 LEU A 172 ILE A 174 0 SHEET 2 AC 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C TRP A 196 N TPO A 197 1555 1555 1.32 LINK C TPO A 197 N LEU A 198 1555 1555 1.32 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.32 SITE 1 AC1 15 GLY A 50 THR A 51 GLY A 52 GLY A 55 SITE 2 AC1 15 VAL A 57 ALA A 70 GLU A 121 TYR A 122 SITE 3 AC1 15 VAL A 123 GLU A 127 GLU A 170 LEU A 173 SITE 4 AC1 15 THR A 183 ASP A 184 PHE A 327 SITE 1 AC2 5 SER A 130 ARG A 134 ASN A 326 PHE A 327 SITE 2 AC2 5 ASP A 328 CRYST1 71.813 74.746 79.131 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013925 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012637 0.00000