data_4UN2 # _entry.id 4UN2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4UN2 PDBE EBI-60745 WWPDB D_1290060745 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4UN2 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-05-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Michielssens, S.' 1 'Peters, J.H.' 2 'Ban, D.' 3 'Pratihar, S.' 4 'Seeliger, D.' 5 'Sharma, M.' 6 'Giller, K.' 7 'Sabo, T.M.' 8 'Becker, S.' 9 'Lee, D.' 10 'Griesinger, C.' 11 'de Groot, B.L.' 12 # _citation.id primary _citation.title 'A Designed Conformational Shift to Control Protein Binding Specificity.' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 53 _citation.page_first 10367 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25115701 _citation.pdbx_database_id_DOI 10.1002/ANIE.201403102 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Michielssens, S.' 1 primary 'Peters, J.H.' 2 primary 'Ban, D.' 3 primary 'Pratihar, S.' 4 primary 'Seeliger, D.' 5 primary 'Sharma, M.' 6 primary 'Giller, K.' 7 primary 'Sabo, T.M.' 8 primary 'Becker, S.' 9 primary 'Lee, D.' 10 primary 'Griesinger, C.' 11 primary 'De Groot, B.L.' 12 # _cell.entry_id 4UN2 _cell.length_a 77.971 _cell.length_b 77.972 _cell.length_c 49.485 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UN2 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man UBIQUITIN 8576.831 1 ? ? ? ? 2 polymer man 'UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2' 5344.805 1 ? ? 'UBA DOMAIN, RESIDUES 328-373' ? 3 water nat water 18.015 109 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG A ? 2 'polypeptide(L)' no no GSPEERYEHQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLLNGDV GSPEERYEHQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLLNGDV B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 LYS n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLY n 1 76 GLY n 2 1 GLY n 2 2 SER n 2 3 PRO n 2 4 GLU n 2 5 GLU n 2 6 ARG n 2 7 TYR n 2 8 GLU n 2 9 HIS n 2 10 GLN n 2 11 LEU n 2 12 ARG n 2 13 GLN n 2 14 LEU n 2 15 ASN n 2 16 ASP n 2 17 MET n 2 18 GLY n 2 19 PHE n 2 20 PHE n 2 21 ASP n 2 22 PHE n 2 23 ASP n 2 24 ARG n 2 25 ASN n 2 26 VAL n 2 27 ALA n 2 28 ALA n 2 29 LEU n 2 30 ARG n 2 31 ARG n 2 32 SER n 2 33 GLY n 2 34 GLY n 2 35 SER n 2 36 VAL n 2 37 GLN n 2 38 GLY n 2 39 ALA n 2 40 LEU n 2 41 ASP n 2 42 SER n 2 43 LEU n 2 44 LEU n 2 45 ASN n 2 46 GLY n 2 47 ASP n 2 48 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID PET32A ? ? ? ? ? 2 1 sample ? ? ? ;BAKER'S YEAST ; ? ? ? ? ? ? ? ? 'SACCHAROMYCES CEREVISIAE' 4932 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? PLASMID PET28A ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP UBC_HUMAN 1 ? ? P0CG48 ? 2 UNP DSK2_YEAST 2 ? ? P48510 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4UN2 A 1 ? 76 ? P0CG48 1 ? 76 ? 1 76 2 2 4UN2 B 3 ? 48 ? P48510 328 ? 373 ? 328 373 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 4UN2 GLY B 1 ? UNP P48510 ? ? 'expression tag' 326 1 2 4UN2 SER B 2 ? UNP P48510 ? ? 'expression tag' 327 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4UN2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.19 _exptl_crystal.density_percent_sol 62 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2M MAGNESIUM CHLORIDE, 0.1M TRIS PH 8.5, 20% PEG 8000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-05-27 _diffrn_detector.details 'DYNAMICALLY BENDABLE MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4UN2 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 67.50 _reflns.d_resolution_high 1.52 _reflns.number_obs 27296 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 27.78 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.07 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.52 _reflns_shell.d_res_low 1.62 _reflns_shell.percent_possible_all 98.1 _reflns_shell.Rmerge_I_obs 0.37 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.55 _reflns_shell.pdbx_redundancy 7.93 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4UN2 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27090 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 67.52 _refine.ls_d_res_high 1.51 _refine.ls_percent_reflns_obs 99.22 _refine.ls_R_factor_obs 0.15921 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.15722 _refine.ls_R_factor_R_free 0.19615 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1359 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.953 _refine.B_iso_mean 20.210 _refine.aniso_B[1][1] -0.28 _refine.aniso_B[2][2] -0.28 _refine.aniso_B[3][3] 0.43 _refine.aniso_B[1][2] -0.14 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRIES 1UBQ AND 2BWB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.061 _refine.pdbx_overall_ESU_R_Free 0.060 _refine.overall_SU_ML 0.039 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.316 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 893 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 109 _refine_hist.number_atoms_total 1002 _refine_hist.d_res_high 1.51 _refine_hist.d_res_low 67.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.020 ? 926 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 637 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.087 1.977 ? 1251 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.097 3.000 ? 1564 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.904 5.000 ? 119 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.837 25.227 ? 44 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.686 15.000 ? 173 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.616 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.160 0.200 ? 144 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 1032 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 174 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 6.477 3.000 ? 1563 'X-RAY DIFFRACTION' ? r_sphericity_free 30.190 5.000 ? 30 'X-RAY DIFFRACTION' ? r_sphericity_bonded 19.090 5.000 ? 1632 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.515 _refine_ls_shell.d_res_low 1.554 _refine_ls_shell.number_reflns_R_work 1695 _refine_ls_shell.R_factor_R_work 0.209 _refine_ls_shell.percent_reflns_obs 93.88 _refine_ls_shell.R_factor_R_free 0.287 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4UN2 _struct.title 'Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin' _struct.pdbx_descriptor 'UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4UN2 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'PROTEIN BINDING, UBIQUITIN-ASSOCIATED DOMAIN, PROTEIN DEGRADATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? GLY A 35 ? THR A 22 GLY A 35 1 ? 14 HELX_P HELX_P2 2 PRO A 37 ? ASP A 39 ? PRO A 37 ASP A 39 5 ? 3 HELX_P HELX_P3 3 LEU A 56 ? ASN A 60 ? LEU A 56 ASN A 60 5 ? 5 HELX_P HELX_P4 4 SER B 2 ? TYR B 7 ? SER B 327 TYR B 332 1 ? 6 HELX_P HELX_P5 5 TYR B 7 ? MET B 17 ? TYR B 332 MET B 342 1 ? 11 HELX_P HELX_P6 6 ASP B 21 ? GLY B 33 ? ASP B 346 GLY B 358 1 ? 13 HELX_P HELX_P7 7 SER B 35 ? LEU B 44 ? SER B 360 LEU B 369 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 12 ? GLU A 16 ? THR A 12 GLU A 16 AA 2 GLN A 2 ? THR A 7 ? GLN A 2 THR A 7 AA 3 THR A 66 ? LEU A 71 ? THR A 66 LEU A 71 AA 4 GLN A 41 ? PHE A 45 ? GLN A 41 PHE A 45 AA 5 LYS A 48 ? GLN A 49 ? LYS A 48 GLN A 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 15 ? N LEU A 15 O ILE A 3 ? O ILE A 3 AA 2 3 N LYS A 6 ? N LYS A 6 O LEU A 67 ? O LEU A 67 AA 3 4 N VAL A 70 ? N VAL A 70 O ARG A 42 ? O ARG A 42 AA 4 5 N PHE A 45 ? N PHE A 45 O LYS A 48 ? O LYS A 48 # _database_PDB_matrix.entry_id 4UN2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4UN2 _atom_sites.fract_transf_matrix[1][1] 0.012825 _atom_sites.fract_transf_matrix[1][2] 0.007405 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014809 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020208 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 ? ? ? A . n A 1 74 ARG 74 74 ? ? ? A . n A 1 75 GLY 75 75 ? ? ? A . n A 1 76 GLY 76 76 ? ? ? A . n B 2 1 GLY 1 326 ? ? ? B . n B 2 2 SER 2 327 327 SER SER B . n B 2 3 PRO 3 328 328 PRO PRO B . n B 2 4 GLU 4 329 329 GLU GLU B . n B 2 5 GLU 5 330 330 GLU GLU B . n B 2 6 ARG 6 331 331 ARG ARG B . n B 2 7 TYR 7 332 332 TYR TYR B . n B 2 8 GLU 8 333 333 GLU GLU B . n B 2 9 HIS 9 334 334 HIS HIS B . n B 2 10 GLN 10 335 335 GLN GLN B . n B 2 11 LEU 11 336 336 LEU LEU B . n B 2 12 ARG 12 337 337 ARG ARG B . n B 2 13 GLN 13 338 338 GLN GLN B . n B 2 14 LEU 14 339 339 LEU LEU B . n B 2 15 ASN 15 340 340 ASN ASN B . n B 2 16 ASP 16 341 341 ASP ASP B . n B 2 17 MET 17 342 342 MET MET B . n B 2 18 GLY 18 343 343 GLY GLY B . n B 2 19 PHE 19 344 344 PHE PHE B . n B 2 20 PHE 20 345 345 PHE PHE B . n B 2 21 ASP 21 346 346 ASP ASP B . n B 2 22 PHE 22 347 347 PHE PHE B . n B 2 23 ASP 23 348 348 ASP ASP B . n B 2 24 ARG 24 349 349 ARG ARG B . n B 2 25 ASN 25 350 350 ASN ASN B . n B 2 26 VAL 26 351 351 VAL VAL B . n B 2 27 ALA 27 352 352 ALA ALA B . n B 2 28 ALA 28 353 353 ALA ALA B . n B 2 29 LEU 29 354 354 LEU LEU B . n B 2 30 ARG 30 355 355 ARG ARG B . n B 2 31 ARG 31 356 356 ARG ARG B . n B 2 32 SER 32 357 357 SER SER B . n B 2 33 GLY 33 358 358 GLY GLY B . n B 2 34 GLY 34 359 359 GLY GLY B . n B 2 35 SER 35 360 360 SER SER B . n B 2 36 VAL 36 361 361 VAL VAL B . n B 2 37 GLN 37 362 362 GLN GLN B . n B 2 38 GLY 38 363 363 GLY GLY B . n B 2 39 ALA 39 364 364 ALA ALA B . n B 2 40 LEU 40 365 365 LEU LEU B . n B 2 41 ASP 41 366 366 ASP ASP B . n B 2 42 SER 42 367 367 SER SER B . n B 2 43 LEU 43 368 368 LEU LEU B . n B 2 44 LEU 44 369 369 LEU LEU B . n B 2 45 ASN 45 370 ? ? ? B . n B 2 46 GLY 46 371 ? ? ? B . n B 2 47 ASP 47 372 ? ? ? B . n B 2 48 VAL 48 373 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2023 2023 HOH HOH A . C 3 HOH 23 2024 2024 HOH HOH A . C 3 HOH 24 2025 2025 HOH HOH A . C 3 HOH 25 2026 2026 HOH HOH A . C 3 HOH 26 2027 2027 HOH HOH A . C 3 HOH 27 2028 2028 HOH HOH A . C 3 HOH 28 2030 2030 HOH HOH A . C 3 HOH 29 2031 2031 HOH HOH A . C 3 HOH 30 2032 2032 HOH HOH A . C 3 HOH 31 2033 2033 HOH HOH A . C 3 HOH 32 2034 2034 HOH HOH A . C 3 HOH 33 2035 2035 HOH HOH A . C 3 HOH 34 2036 2036 HOH HOH A . C 3 HOH 35 2037 2037 HOH HOH A . C 3 HOH 36 2038 2038 HOH HOH A . C 3 HOH 37 2039 2039 HOH HOH A . C 3 HOH 38 2040 2040 HOH HOH A . C 3 HOH 39 2041 2041 HOH HOH A . C 3 HOH 40 2042 2042 HOH HOH A . C 3 HOH 41 2043 2043 HOH HOH A . C 3 HOH 42 2044 2044 HOH HOH A . C 3 HOH 43 2045 2045 HOH HOH A . C 3 HOH 44 2046 2046 HOH HOH A . C 3 HOH 45 2047 2047 HOH HOH A . C 3 HOH 46 2048 2048 HOH HOH A . C 3 HOH 47 2049 2049 HOH HOH A . C 3 HOH 48 2050 2050 HOH HOH A . C 3 HOH 49 2051 2051 HOH HOH A . C 3 HOH 50 2052 2052 HOH HOH A . C 3 HOH 51 2053 2053 HOH HOH A . C 3 HOH 52 2054 2054 HOH HOH A . C 3 HOH 53 2055 2055 HOH HOH A . C 3 HOH 54 2056 2056 HOH HOH A . C 3 HOH 55 2057 2057 HOH HOH A . C 3 HOH 56 2058 2058 HOH HOH A . C 3 HOH 57 2059 2059 HOH HOH A . C 3 HOH 58 2060 2060 HOH HOH A . C 3 HOH 59 2061 2061 HOH HOH A . C 3 HOH 60 2062 2062 HOH HOH A . C 3 HOH 61 2064 2064 HOH HOH A . C 3 HOH 62 2065 2065 HOH HOH A . C 3 HOH 63 2066 2066 HOH HOH A . C 3 HOH 64 2067 2067 HOH HOH A . C 3 HOH 65 2068 2068 HOH HOH A . C 3 HOH 66 2069 2069 HOH HOH A . C 3 HOH 67 2070 2070 HOH HOH A . C 3 HOH 68 2071 2071 HOH HOH A . D 3 HOH 1 2001 2001 HOH HOH B . D 3 HOH 2 2002 2002 HOH HOH B . D 3 HOH 3 2003 2003 HOH HOH B . D 3 HOH 4 2004 2004 HOH HOH B . D 3 HOH 5 2005 2005 HOH HOH B . D 3 HOH 6 2006 2006 HOH HOH B . D 3 HOH 7 2007 2007 HOH HOH B . D 3 HOH 8 2008 2008 HOH HOH B . D 3 HOH 9 2009 2009 HOH HOH B . D 3 HOH 10 2010 2010 HOH HOH B . D 3 HOH 11 2011 2011 HOH HOH B . D 3 HOH 12 2012 2012 HOH HOH B . D 3 HOH 13 2013 2013 HOH HOH B . D 3 HOH 14 2014 2014 HOH HOH B . D 3 HOH 15 2015 2015 HOH HOH B . D 3 HOH 16 2016 2016 HOH HOH B . D 3 HOH 17 2017 2017 HOH HOH B . D 3 HOH 18 2018 2018 HOH HOH B . D 3 HOH 19 2019 2019 HOH HOH B . D 3 HOH 20 2020 2020 HOH HOH B . D 3 HOH 21 2021 2021 HOH HOH B . D 3 HOH 22 2022 2022 HOH HOH B . D 3 HOH 23 2023 2023 HOH HOH B . D 3 HOH 24 2024 2024 HOH HOH B . D 3 HOH 25 2025 2025 HOH HOH B . D 3 HOH 26 2026 2026 HOH HOH B . D 3 HOH 27 2027 2027 HOH HOH B . D 3 HOH 28 2028 2028 HOH HOH B . D 3 HOH 29 2029 2029 HOH HOH B . D 3 HOH 30 2030 2030 HOH HOH B . D 3 HOH 31 2031 2031 HOH HOH B . D 3 HOH 32 2032 2032 HOH HOH B . D 3 HOH 33 2033 2033 HOH HOH B . D 3 HOH 34 2034 2034 HOH HOH B . D 3 HOH 35 2035 2035 HOH HOH B . D 3 HOH 36 2036 2036 HOH HOH B . D 3 HOH 37 2037 2037 HOH HOH B . D 3 HOH 38 2038 2038 HOH HOH B . D 3 HOH 39 2039 2039 HOH HOH B . D 3 HOH 40 2040 2040 HOH HOH B . D 3 HOH 41 2041 2041 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 930 ? 1 MORE -5.2 ? 1 'SSA (A^2)' 6260 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-27 2 'Structure model' 1 1 2014-09-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.6.0117 ? 1 XDS 'data reduction' . ? 2 SADABS 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A LEU 67 ? ? CG A LEU 67 ? ? CD1 A LEU 67 ? ? 125.51 111.00 14.51 1.70 N 2 1 CG B MET 342 ? ? SD B MET 342 ? ? CE B MET 342 ? ? 81.71 100.20 -18.49 1.60 N 3 1 NE B ARG 356 ? ? CZ B ARG 356 ? ? NH1 B ARG 356 ? ? 124.22 120.30 3.92 0.50 N 4 1 NE B ARG 356 ? ? CZ B ARG 356 ? ? NH2 B ARG 356 ? ? 114.47 120.30 -5.83 0.50 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 40 ? CG ? A GLN 40 CG 2 1 Y 1 A GLN 40 ? CD ? A GLN 40 CD 3 1 Y 1 A GLN 40 ? OE1 ? A GLN 40 OE1 4 1 Y 1 A GLN 40 ? NE2 ? A GLN 40 NE2 5 1 Y 1 A LYS 48 ? CE ? A LYS 48 CE 6 1 Y 1 A LYS 48 ? NZ ? A LYS 48 NZ 7 1 Y 1 A ARG 54 ? CZ ? A ARG 54 CZ 8 1 Y 1 A ARG 54 ? NH1 ? A ARG 54 NH1 9 1 Y 1 A ARG 54 ? NH2 ? A ARG 54 NH2 10 1 Y 1 B GLU 329 ? CG ? B GLU 4 CG 11 1 Y 1 B GLU 329 ? CD ? B GLU 4 CD 12 1 Y 1 B GLU 329 ? OE1 ? B GLU 4 OE1 13 1 Y 1 B GLU 329 ? OE2 ? B GLU 4 OE2 14 1 Y 1 B GLU 330 ? CG ? B GLU 5 CG 15 1 Y 1 B GLU 330 ? CD ? B GLU 5 CD 16 1 Y 1 B GLU 330 ? OE1 ? B GLU 5 OE1 17 1 Y 1 B GLU 330 ? OE2 ? B GLU 5 OE2 18 1 Y 1 B GLU 333 ? CD ? B GLU 8 CD 19 1 Y 1 B GLU 333 ? OE1 ? B GLU 8 OE1 20 1 Y 1 B GLU 333 ? OE2 ? B GLU 8 OE2 21 1 Y 1 B ARG 337 ? CD ? B ARG 12 CD 22 1 Y 1 B ARG 337 ? NE ? B ARG 12 NE 23 1 Y 1 B ARG 337 ? CZ ? B ARG 12 CZ 24 1 Y 1 B ARG 337 ? NH1 ? B ARG 12 NH1 25 1 Y 1 B ARG 337 ? NH2 ? B ARG 12 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 73 ? A LEU 73 2 1 Y 1 A ARG 74 ? A ARG 74 3 1 Y 1 A GLY 75 ? A GLY 75 4 1 Y 1 A GLY 76 ? A GLY 76 5 1 Y 1 B GLY 326 ? B GLY 1 6 1 Y 1 B ASN 370 ? B ASN 45 7 1 Y 1 B GLY 371 ? B GLY 46 8 1 Y 1 B ASP 372 ? B ASP 47 9 1 Y 1 B VAL 373 ? B VAL 48 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #