HEADER HYDROLASE/DNA 26-MAY-14 4UNC TITLE THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 8 TITLE 2 DAYS INCUBATION IN 5MM MN (STATE 6) COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMING ENDONUCLEASE I-DMOI; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: I-DMOI; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 5'-D(*GP*CP*CP*TP*TP*GP*CP*CP*GP*GP*GP*TP*AP*A)-3'; COMPND 9 CHAIN: B, E, H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 5'-D(*CP*GP*CP*GP*CP*CP*GP*GP*AP*AP*CP*TP*TP*AP*C)-3'; COMPND 13 CHAIN: C, F, I; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: 5'-D(*GP*TP*TP*CP*CP*GP*GP*CP*GP*CP*G)-3'; COMPND 17 CHAIN: J, L, N; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: 5'-D(*CP*CP*GP*GP*CP*AP*AP*GP*GP*C)-3'; COMPND 21 CHAIN: K, M, O; COMPND 22 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFUROCOCCUS MOBILIS; SOURCE 3 ORGANISM_TAXID: 2274; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET24D; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630; SOURCE 18 MOL_ID: 4; SOURCE 19 SYNTHETIC: YES; SOURCE 20 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 21 ORGANISM_TAXID: 32630; SOURCE 22 MOL_ID: 5; SOURCE 23 SYNTHETIC: YES; SOURCE 24 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 25 ORGANISM_TAXID: 32630 KEYWDS HYDROLASE-DNA COMPLEX, CATALYSIS, PROTEIN-DNA INTERACTION EXPDTA X-RAY DIFFRACTION AUTHOR R.MOLINA,S.STELLA,P.REDONDO,H.GOMEZ,M.J.MARCAIDA,M.OROZCO,J.PRIETO, AUTHOR 2 G.MONTOYA REVDAT 3 10-JAN-24 4UNC 1 REMARK LINK REVDAT 2 21-JAN-15 4UNC 1 JRNL REVDAT 1 17-DEC-14 4UNC 0 JRNL AUTH R.MOLINA,S.STELLA,P.REDONDO,H.GOMEZ,M.J.MARCAIDA,M.OROZCO, JRNL AUTH 2 J.PRIETO,G.MONTOYA JRNL TITL VISUALIZING PHOSPHODIESTER-BOND HYDROLYSIS BY AN JRNL TITL 2 ENDONUCLEASE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 22 65 2015 JRNL REFN ISSN 1545-9993 JRNL PMID 25486305 JRNL DOI 10.1038/NSMB.2932 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 58929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.400 REMARK 3 FREE R VALUE TEST SET COUNT : 3968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2822 - 6.9766 0.99 4127 157 0.1383 0.1464 REMARK 3 2 6.9766 - 5.5405 0.99 4082 148 0.1583 0.2202 REMARK 3 3 5.5405 - 4.8410 0.99 4129 143 0.1617 0.1983 REMARK 3 4 4.8410 - 4.3987 0.98 4059 133 0.1548 0.2045 REMARK 3 5 4.3987 - 4.0837 0.98 4138 150 0.1551 0.2007 REMARK 3 6 4.0837 - 3.8430 0.98 4026 150 0.1764 0.1655 REMARK 3 7 3.8430 - 3.6506 0.98 4050 155 0.1850 0.2229 REMARK 3 8 3.6506 - 3.4918 0.98 4064 153 0.1747 0.2410 REMARK 3 9 3.4918 - 3.3574 0.97 3990 140 0.1780 0.2217 REMARK 3 10 3.3574 - 3.2416 0.97 4065 129 0.1902 0.2269 REMARK 3 11 3.2416 - 3.1402 0.97 3998 147 0.1948 0.2450 REMARK 3 12 3.1402 - 3.0505 0.97 3945 133 0.1987 0.2694 REMARK 3 13 3.0505 - 2.9702 0.97 4107 152 0.2193 0.2338 REMARK 3 14 2.9702 - 2.8977 0.96 3948 134 0.2295 0.2812 REMARK 3 15 2.8977 - 2.8319 0.96 4002 158 0.2312 0.2574 REMARK 3 16 2.8319 - 2.7716 0.96 4014 136 0.2394 0.2887 REMARK 3 17 2.7716 - 2.7162 0.95 3904 142 0.2402 0.3134 REMARK 3 18 2.7162 - 2.6649 0.96 4033 128 0.2462 0.2902 REMARK 3 19 2.6649 - 2.6173 0.95 3859 136 0.2420 0.3061 REMARK 3 20 2.6173 - 2.5730 0.94 3969 153 0.2354 0.3020 REMARK 3 21 2.5730 - 2.5315 0.94 3908 147 0.2446 0.2661 REMARK 3 22 2.5315 - 2.4925 0.94 3917 124 0.2411 0.2584 REMARK 3 23 2.4925 - 2.4559 0.94 3910 136 0.2528 0.3131 REMARK 3 24 2.4559 - 2.4213 0.93 3797 134 0.2618 0.3305 REMARK 3 25 2.4213 - 2.3886 0.93 3932 140 0.2538 0.3517 REMARK 3 26 2.3886 - 2.3576 0.93 3852 146 0.2644 0.3649 REMARK 3 27 2.3576 - 2.3281 0.92 3767 133 0.2584 0.2801 REMARK 3 28 2.3281 - 2.3000 0.90 3830 131 0.2587 0.3087 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8111 REMARK 3 ANGLE : 1.144 11588 REMARK 3 CHIRALITY : 0.049 1306 REMARK 3 PLANARITY : 0.006 960 REMARK 3 DIHEDRAL : 23.712 3269 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1290060754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.65 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58967 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 46.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VS8 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.20450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F, L, M REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, J, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I, N, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 HIS A 2 REMARK 465 ASN A 3 REMARK 465 ASN A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 GLU A 188 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 LEU A 192 REMARK 465 GLU A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 HIS A 197 REMARK 465 HIS A 198 REMARK 465 HIS A 199 REMARK 465 ALA D 1 REMARK 465 HIS D 2 REMARK 465 ASN D 3 REMARK 465 HIS D 196 REMARK 465 HIS D 197 REMARK 465 HIS D 198 REMARK 465 HIS D 199 REMARK 465 ALA G 1 REMARK 465 HIS G 2 REMARK 465 ASN G 3 REMARK 465 ASN G 4 REMARK 465 HIS G 181 REMARK 465 LEU G 182 REMARK 465 ASN G 183 REMARK 465 PRO G 184 REMARK 465 LEU G 185 REMARK 465 PRO G 186 REMARK 465 PRO G 187 REMARK 465 GLU G 188 REMARK 465 ALA G 189 REMARK 465 ALA G 190 REMARK 465 ALA G 191 REMARK 465 LEU G 192 REMARK 465 GLU G 193 REMARK 465 HIS G 194 REMARK 465 HIS G 195 REMARK 465 HIS G 196 REMARK 465 HIS G 197 REMARK 465 HIS G 198 REMARK 465 HIS G 199 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU G 5 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 2007 O HOH L 2002 1.84 REMARK 500 O HOH G 2011 O HOH G 2014 2.00 REMARK 500 O HOH I 2004 O HOH I 2005 2.01 REMARK 500 OP2 DA H 13 O HOH G 2008 2.02 REMARK 500 O HOH L 2004 O HOH L 2005 2.04 REMARK 500 O HOH D 2004 O HOH D 2007 2.08 REMARK 500 OP2 DT B 4 O HOH B 2002 2.08 REMARK 500 O HOH A 2027 O HOH A 2028 2.09 REMARK 500 O HOH C 2002 O HOH C 2005 2.10 REMARK 500 N GLU G 5 O HOH G 2001 2.15 REMARK 500 NH1 ARG G 33 O6 DG N 21 2.16 REMARK 500 OE2 GLU D 96 O HOH D 2026 2.19 REMARK 500 OP2 DG F 2 O HOH D 2010 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DG J 15 P DG J 15 OP3 -0.132 REMARK 500 DC K 16 P DC K 16 OP3 -0.111 REMARK 500 DG L 15 P DG L 15 OP3 -0.127 REMARK 500 DC M 16 P DC M 16 OP3 -0.114 REMARK 500 DG N 15 P DG N 15 OP3 -0.139 REMARK 500 DC O 16 P DC O 16 OP3 -0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 9 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DG E 11 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA F 9 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DA I 9 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG J 15 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG J 21 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG K 18 O4' - C1' - N9 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG L 21 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DC L 24 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG M 18 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DC N 22 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG O 18 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 47 -60.67 68.78 REMARK 500 ASP A 75 -84.32 2.35 REMARK 500 SER A 84 113.77 -163.51 REMARK 500 LEU A 122 -1.19 59.72 REMARK 500 ASN A 129 145.70 -170.87 REMARK 500 ILE A 177 -63.93 -106.40 REMARK 500 GLN D 42 138.79 -171.22 REMARK 500 SER D 84 116.03 -161.88 REMARK 500 LEU D 122 11.37 53.42 REMARK 500 ILE D 177 -66.12 -97.39 REMARK 500 GLU D 188 -56.45 72.02 REMARK 500 ARG G 77 147.37 -174.14 REMARK 500 SER G 84 106.01 -160.74 REMARK 500 LEU G 122 -1.62 55.93 REMARK 500 ASN G 129 142.71 -171.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN D 4 GLU D 5 136.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2005 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1189 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 20 O REMARK 620 2 GLU A 117 OE2 84.0 REMARK 620 3 HOH A2003 O 95.3 112.9 REMARK 620 4 DC C 15 OP1 170.4 86.6 86.2 REMARK 620 5 DG J 15 OP1 91.3 151.2 95.9 98.1 REMARK 620 6 DG J 15 OP2 81.6 92.1 154.4 101.1 59.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1188 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD2 REMARK 620 2 ALA A 116 O 89.6 REMARK 620 3 HOH A2004 O 86.1 80.8 REMARK 620 4 DA B 14 OP1 94.1 171.2 91.5 REMARK 620 5 DC K 16 OP2 173.9 86.0 97.5 90.9 REMARK 620 6 DC K 16 OP3 113.3 86.5 156.8 99.4 62.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1190 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 21 OD1 REMARK 620 2 GLU A 117 OE1 99.8 REMARK 620 3 DA B 14 O3' 81.3 176.4 REMARK 620 4 DC C 15 O3' 155.7 74.6 105.8 REMARK 620 5 DG J 15 OP2 112.9 107.8 68.7 91.2 REMARK 620 6 DC K 16 OP3 83.9 98.7 84.8 73.9 144.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1198 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY D 20 O REMARK 620 2 GLU D 117 OE2 92.4 REMARK 620 3 HOH D2005 O 90.0 93.0 REMARK 620 4 DC F 15 OP1 175.5 84.4 87.0 REMARK 620 5 DG L 15 OP3 84.9 106.7 159.8 99.0 REMARK 620 6 DG L 15 OP2 90.1 168.0 98.8 93.7 61.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1197 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 21 OD2 REMARK 620 2 ALA D 116 O 86.6 REMARK 620 3 HOH D2006 O 90.4 87.5 REMARK 620 4 DA E 14 OP1 94.5 172.7 85.2 REMARK 620 5 DC M 16 OP3 168.4 85.7 97.9 94.3 REMARK 620 6 DC M 16 OP2 104.4 77.7 158.2 108.9 65.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1199 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 21 OD1 REMARK 620 2 GLU D 117 OE1 87.8 REMARK 620 3 DA E 14 O3' 84.8 158.9 REMARK 620 4 DC F 15 O3' 164.2 88.8 103.3 REMARK 620 5 DG L 15 OP3 106.9 91.5 71.9 88.6 REMARK 620 6 DC M 16 OP2 84.3 105.3 93.6 81.7 160.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN G1182 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY G 20 O REMARK 620 2 GLU G 117 OE2 87.1 REMARK 620 3 HOH G2002 O 88.3 84.7 REMARK 620 4 DC I 15 OP1 171.1 84.9 87.1 REMARK 620 5 DG N 15 OP3 83.7 115.7 157.5 103.3 REMARK 620 6 DG N 15 OP2 91.1 171.5 103.6 97.3 55.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN G1181 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP G 21 OD2 REMARK 620 2 ALA G 116 O 92.1 REMARK 620 3 HOH G2003 O 91.8 86.6 REMARK 620 4 DA H 14 OP1 89.6 178.0 94.4 REMARK 620 5 DC O 16 OP3 110.8 84.1 155.9 94.2 REMARK 620 6 DC O 16 OP2 171.7 81.0 92.4 97.2 64.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN G1183 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP G 21 OD1 REMARK 620 2 GLU G 117 OE1 96.3 REMARK 620 3 DA H 14 O3' 83.9 151.8 REMARK 620 4 DC I 15 O3' 160.3 83.3 105.7 REMARK 620 5 DG N 15 OP3 110.1 87.9 65.9 89.6 REMARK 620 6 DC O 16 OP3 83.8 119.4 88.8 79.3 148.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN G 1181 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN G 1182 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1188 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1189 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN G 1183 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1190 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UN6 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT REMARK 900 10 DAYS INCUBATION IN 5MM MN (STATE 7) REMARK 900 RELATED ID: 4UN7 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA REMARK 900 BEFORE INCUBATION IN 5MM MN (STATE 1) REMARK 900 RELATED ID: 4UN8 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT REMARK 900 1H INCUBATION IN 5MM MN (STATE 2) REMARK 900 RELATED ID: 4UN9 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT REMARK 900 8H INCUBATION IN 5MM MN (STATE 3) REMARK 900 RELATED ID: 4UNA RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 2 REMARK 900 DAYS INCUBATION IN 5MM MN (STATE 4) REMARK 900 RELATED ID: 4UNB RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 6 REMARK 900 DAYS INCUBATION IN 5MM MN (STATE 5) DBREF 4UNC A 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4UNC D 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4UNC G 2 188 UNP P21505 DMO1_DESMO 2 188 DBREF 4UNC B 1 14 PDB 4UNC 4UNC 1 14 DBREF 4UNC E 1 14 PDB 4UNC 4UNC 1 14 DBREF 4UNC H 1 14 PDB 4UNC 4UNC 1 14 DBREF 4UNC C 1 15 PDB 4UNC 4UNC 1 15 DBREF 4UNC F 1 15 PDB 4UNC 4UNC 1 15 DBREF 4UNC I 1 15 PDB 4UNC 4UNC 1 15 DBREF 4UNC J 15 25 PDB 4UNC 4UNC 15 25 DBREF 4UNC L 15 25 PDB 4UNC 4UNC 15 25 DBREF 4UNC N 15 25 PDB 4UNC 4UNC 15 25 DBREF 4UNC K 16 25 PDB 4UNC 4UNC 16 25 DBREF 4UNC M 16 25 PDB 4UNC 4UNC 16 25 DBREF 4UNC O 16 25 PDB 4UNC 4UNC 16 25 SEQADV 4UNC ALA A 1 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA A 189 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA A 190 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA A 191 UNP P21505 EXPRESSION TAG SEQADV 4UNC LEU A 192 UNP P21505 EXPRESSION TAG SEQADV 4UNC GLU A 193 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 194 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 195 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 196 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 197 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 198 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS A 199 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA D 1 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA D 189 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA D 190 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA D 191 UNP P21505 EXPRESSION TAG SEQADV 4UNC LEU D 192 UNP P21505 EXPRESSION TAG SEQADV 4UNC GLU D 193 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 194 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 195 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 196 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 197 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 198 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS D 199 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA G 1 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA G 189 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA G 190 UNP P21505 EXPRESSION TAG SEQADV 4UNC ALA G 191 UNP P21505 EXPRESSION TAG SEQADV 4UNC LEU G 192 UNP P21505 EXPRESSION TAG SEQADV 4UNC GLU G 193 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 194 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 195 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 196 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 197 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 198 UNP P21505 EXPRESSION TAG SEQADV 4UNC HIS G 199 UNP P21505 EXPRESSION TAG SEQRES 1 A 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 A 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 A 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 A 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 A 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 A 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 A 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 A 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 A 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 A 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 A 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 A 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 A 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 A 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 A 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 A 199 HIS HIS HIS HIS SEQRES 1 B 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 B 14 DA SEQRES 1 C 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 C 15 DA DC SEQRES 1 D 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 D 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 D 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 D 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 D 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 D 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 D 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 D 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 D 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 D 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 D 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 D 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 D 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 D 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 D 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 D 199 HIS HIS HIS HIS SEQRES 1 E 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 E 14 DA SEQRES 1 F 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 F 15 DA DC SEQRES 1 G 199 ALA HIS ASN ASN GLU ASN VAL SER GLY ILE SER ALA TYR SEQRES 2 G 199 LEU LEU GLY LEU ILE ILE GLY ASP GLY GLY LEU TYR LYS SEQRES 3 G 199 LEU LYS TYR LYS GLY ASN ARG SER GLU TYR ARG VAL VAL SEQRES 4 G 199 ILE THR GLN LYS SER GLU ASN LEU ILE LYS GLN HIS ILE SEQRES 5 G 199 ALA PRO LEU MET GLN PHE LEU ILE ASP GLU LEU ASN VAL SEQRES 6 G 199 LYS SER LYS ILE GLN ILE VAL LYS GLY ASP THR ARG TYR SEQRES 7 G 199 GLU LEU ARG VAL SER SER LYS LYS LEU TYR TYR TYR PHE SEQRES 8 G 199 ALA ASN MET LEU GLU ARG ILE ARG LEU PHE ASN MET ARG SEQRES 9 G 199 GLU GLN ILE ALA PHE ILE LYS GLY LEU TYR VAL ALA GLU SEQRES 10 G 199 GLY ASP LYS THR LEU LYS ARG LEU ARG ILE TRP ASN LYS SEQRES 11 G 199 ASN LYS ALA LEU LEU GLU ILE VAL SER ARG TRP LEU ASN SEQRES 12 G 199 ASN LEU GLY VAL ARG ASN THR ILE HIS LEU ASP ASP HIS SEQRES 13 G 199 ARG HIS GLY VAL TYR VAL LEU ASN ILE SER LEU ARG ASP SEQRES 14 G 199 ARG ILE LYS PHE VAL HIS THR ILE LEU SER SER HIS LEU SEQRES 15 G 199 ASN PRO LEU PRO PRO GLU ALA ALA ALA LEU GLU HIS HIS SEQRES 16 G 199 HIS HIS HIS HIS SEQRES 1 H 14 DG DC DC DT DT DG DC DC DG DG DG DT DA SEQRES 2 H 14 DA SEQRES 1 I 15 DC DG DC DG DC DC DG DG DA DA DC DT DT SEQRES 2 I 15 DA DC SEQRES 1 J 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 K 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 L 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 M 10 DC DC DG DG DC DA DA DG DG DC SEQRES 1 N 11 DG DT DT DC DC DG DG DC DG DC DG SEQRES 1 O 10 DC DC DG DG DC DA DA DG DG DC HET MN A1188 1 HET MN A1189 1 HET MN A1190 1 HET MN D1197 1 HET MN D1198 1 HET MN D1199 1 HET MN G1181 1 HET MN G1182 1 HET MN G1183 1 HETNAM MN MANGANESE (II) ION FORMUL 16 MN 9(MN 2+) FORMUL 25 HOH *118(H2 O) HELIX 1 1 VAL A 7 ASP A 21 1 15 HELIX 2 2 SER A 44 LYS A 49 1 6 HELIX 3 3 HIS A 51 LEU A 63 1 13 HELIX 4 4 SER A 84 ARG A 97 1 14 HELIX 5 5 ILE A 98 PHE A 101 5 4 HELIX 6 6 ASN A 102 GLY A 118 1 17 HELIX 7 7 ASN A 131 LEU A 145 1 15 HELIX 8 8 ASP A 169 ILE A 177 1 9 HELIX 9 9 ASN D 4 ASP D 21 1 18 HELIX 10 10 SER D 44 HIS D 51 1 8 HELIX 11 11 ILE D 52 LEU D 63 1 12 HELIX 12 12 SER D 84 ARG D 97 1 14 HELIX 13 13 ILE D 98 PHE D 101 5 4 HELIX 14 14 ASN D 102 GLY D 118 1 17 HELIX 15 15 ASN D 131 LEU D 145 1 15 HELIX 16 16 ASP D 169 ILE D 177 1 9 HELIX 17 17 GLU D 188 HIS D 195 1 8 HELIX 18 18 GLU G 5 ASP G 21 1 17 HELIX 19 19 SER G 44 HIS G 51 1 8 HELIX 20 20 HIS G 51 LEU G 63 1 13 HELIX 21 21 SER G 84 ARG G 97 1 14 HELIX 22 22 ILE G 98 PHE G 101 5 4 HELIX 23 23 ASN G 102 GLY G 118 1 17 HELIX 24 24 ASN G 131 LEU G 145 1 15 HELIX 25 25 ASP G 169 ILE G 177 1 9 SHEET 1 AA 4 GLY A 22 LYS A 28 0 SHEET 2 AA 4 SER A 34 GLN A 42 -1 O GLU A 35 N LEU A 27 SHEET 3 AA 4 TYR A 78 SER A 83 -1 O TYR A 78 N GLN A 42 SHEET 4 AA 4 ILE A 69 LYS A 73 -1 O GLN A 70 N ARG A 81 SHEET 1 AB 3 LEU A 125 ASN A 129 0 SHEET 2 AB 3 VAL A 160 ILE A 165 -1 O TYR A 161 N ASN A 129 SHEET 3 AB 3 ASN A 149 ASP A 155 -1 O THR A 150 N ASN A 164 SHEET 1 DA 4 GLY D 22 LYS D 28 0 SHEET 2 DA 4 SER D 34 GLN D 42 -1 O GLU D 35 N LEU D 27 SHEET 3 DA 4 TYR D 78 SER D 83 -1 O TYR D 78 N GLN D 42 SHEET 4 DA 4 ILE D 69 LYS D 73 -1 O GLN D 70 N ARG D 81 SHEET 1 DB 3 LEU D 125 ASN D 129 0 SHEET 2 DB 3 VAL D 160 ILE D 165 -1 O TYR D 161 N ASN D 129 SHEET 3 DB 3 ASN D 149 ASP D 155 -1 O THR D 150 N ASN D 164 SHEET 1 GA 4 GLY G 22 LYS G 28 0 SHEET 2 GA 4 SER G 34 GLN G 42 -1 O GLU G 35 N LEU G 27 SHEET 3 GA 4 TYR G 78 SER G 83 -1 O TYR G 78 N GLN G 42 SHEET 4 GA 4 ILE G 69 LYS G 73 -1 O GLN G 70 N ARG G 81 SHEET 1 GB 3 ARG G 126 ASN G 129 0 SHEET 2 GB 3 VAL G 160 ILE G 165 -1 O TYR G 161 N ASN G 129 SHEET 3 GB 3 ASN G 149 ASP G 155 -1 O THR G 150 N ASN G 164 LINK O GLY A 20 MN MN A1189 1555 1555 2.37 LINK OD2 ASP A 21 MN MN A1188 1555 1555 2.19 LINK OD1 ASP A 21 MN MN A1190 1555 1555 2.31 LINK O ALA A 116 MN MN A1188 1555 1555 2.34 LINK OE2 GLU A 117 MN MN A1189 1555 1555 1.90 LINK OE1 GLU A 117 MN MN A1190 1555 1555 2.21 LINK MN MN A1188 O HOH A2004 1555 1555 2.04 LINK MN MN A1188 OP1 DA B 14 1555 1555 1.99 LINK MN MN A1188 OP2 DC K 16 1555 1555 2.49 LINK MN MN A1188 OP3 DC K 16 1555 1555 2.17 LINK MN MN A1189 O HOH A2003 1555 1555 2.19 LINK MN MN A1189 OP1 DC C 15 1555 1555 2.13 LINK MN MN A1189 OP1 DG J 15 1555 1555 2.29 LINK MN MN A1189 OP2 DG J 15 1555 1555 2.74 LINK MN MN A1190 O3' DA B 14 1555 1555 2.58 LINK MN MN A1190 O3' DC C 15 1555 1555 2.68 LINK MN MN A1190 OP2 DG J 15 1555 1555 2.19 LINK MN MN A1190 OP3 DC K 16 1555 1555 2.59 LINK O GLY D 20 MN MN D1198 1555 1555 2.37 LINK OD2 ASP D 21 MN MN D1197 1555 1555 2.22 LINK OD1 ASP D 21 MN MN D1199 1555 1555 2.27 LINK O ALA D 116 MN MN D1197 1555 1555 2.32 LINK OE2 GLU D 117 MN MN D1198 1555 1555 1.97 LINK OE1 GLU D 117 MN MN D1199 1555 1555 2.15 LINK MN MN D1197 O HOH D2006 1555 1555 2.03 LINK MN MN D1197 OP1 DA E 14 1555 1555 2.05 LINK MN MN D1197 OP3 DC M 16 1555 1555 2.37 LINK MN MN D1197 OP2 DC M 16 1555 1555 2.10 LINK MN MN D1198 O HOH D2005 1555 1555 2.24 LINK MN MN D1198 OP1 DC F 15 1555 1555 2.18 LINK MN MN D1198 OP3 DG L 15 1555 1555 2.53 LINK MN MN D1198 OP2 DG L 15 1555 1555 2.08 LINK MN MN D1199 O3' DA E 14 1555 1555 2.48 LINK MN MN D1199 O3' DC F 15 1555 1555 2.50 LINK MN MN D1199 OP3 DG L 15 1555 1555 2.23 LINK MN MN D1199 OP2 DC M 16 1555 1555 2.28 LINK O GLY G 20 MN MN G1182 1555 1555 2.38 LINK OD2 ASP G 21 MN MN G1181 1555 1555 2.19 LINK OD1 ASP G 21 MN MN G1183 1555 1555 2.30 LINK O ALA G 116 MN MN G1181 1555 1555 2.24 LINK OE2 GLU G 117 MN MN G1182 1555 1555 2.24 LINK OE1 GLU G 117 MN MN G1183 1555 1555 2.35 LINK MN MN G1181 O HOH G2003 1555 1555 2.22 LINK MN MN G1181 OP1 DA H 14 1555 1555 2.11 LINK MN MN G1181 OP3 DC O 16 1555 1555 2.08 LINK MN MN G1181 OP2 DC O 16 1555 1555 2.42 LINK MN MN G1182 O HOH G2002 1555 1555 2.18 LINK MN MN G1182 OP1 DC I 15 1555 1555 2.04 LINK MN MN G1182 OP3 DG N 15 1555 1555 2.80 LINK MN MN G1182 OP2 DG N 15 1555 1555 1.95 LINK MN MN G1183 O3' DA H 14 1555 1555 2.64 LINK MN MN G1183 O3' DC I 15 1555 1555 2.58 LINK MN MN G1183 OP3 DG N 15 1555 1555 2.22 LINK MN MN G1183 OP3 DC O 16 1555 1555 2.54 CISPEP 1 LYS D 30 GLY D 31 0 -5.39 CISPEP 2 GLY D 31 ASN D 32 0 -22.26 CISPEP 3 LYS G 30 GLY G 31 0 -6.05 CISPEP 4 GLY G 31 ASN G 32 0 -4.10 SITE 1 AC1 6 ASP D 21 ALA D 116 LYS D 120 HOH D2006 SITE 2 AC1 6 DA E 14 DC M 16 SITE 1 AC2 5 GLY D 20 GLU D 117 HOH D2005 DC F 15 SITE 2 AC2 5 DG L 15 SITE 1 AC3 5 ASP G 21 ALA G 116 HOH G2003 DA H 14 SITE 2 AC3 5 DC O 16 SITE 1 AC4 5 GLY G 20 GLU G 117 HOH G2002 DC I 15 SITE 2 AC4 5 DG N 15 SITE 1 AC5 5 ASP A 21 ALA A 116 HOH A2004 DA B 14 SITE 2 AC5 5 DC K 16 SITE 1 AC6 5 GLY A 20 GLU A 117 HOH A2003 DC C 15 SITE 2 AC6 5 DG J 15 SITE 1 AC7 6 ASP G 21 GLU G 117 DA H 14 DC I 15 SITE 2 AC7 6 DG N 15 DC O 16 SITE 1 AC8 6 ASP D 21 GLU D 117 DA E 14 DC F 15 SITE 2 AC8 6 DG L 15 DC M 16 SITE 1 AC9 7 GLY A 20 ASP A 21 GLU A 117 DA B 14 SITE 2 AC9 7 DC C 15 DG J 15 DC K 16 CRYST1 106.803 70.409 107.172 90.00 119.77 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009363 0.000000 0.005356 0.00000 SCALE2 0.000000 0.014203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010749 0.00000