HEADER ISOMERASE 29-MAY-14 4UNK TITLE CRYSTAL STRUCTURE OF HUMAN TRIOSEPHOSPHATE ISOMERASE (MUTANT N15D) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIOSEPHOSPHATE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 39-286; COMPND 5 SYNONYM: TIM, TRIOSE-PHOSPHATE ISOMERASE; COMPND 6 EC: 5.3.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODON PLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET3B KEYWDS ISOMERASE, DEAMIDATION EXPDTA X-RAY DIFFRACTION AUTHOR I.DELAMORA-DELAMORA,A.TORRES-LARIOS,S.ENRIQUEZ-FLORES,S.T.MENDEZ, AUTHOR 2 A.CASTILLO-VILLANUEVA,S.GOMEZ-MANZO,G.LOPEZ-VELAZQUEZ,J.MARCIAL- AUTHOR 3 QUINO,A.TORRES-ARROYO,I.GARCIA-TORRES,H.REYES-VIVAS,J.ORIA-HERNANDEZ REVDAT 2 10-JAN-24 4UNK 1 REMARK REVDAT 1 04-FEB-15 4UNK 0 JRNL AUTH I.DELAMORA-DELAMORA,A.TORRES-LARIOS,S.ENRIQUEZ-FLORES, JRNL AUTH 2 S.T.MENDEZ,A.CASTILLO-VILLANUEVA,S.GOMEZ-MANZO, JRNL AUTH 3 G.LOPEZ-VELAZQUEZ,J.MARCIAL-QUINO,A.TORRES-ARROYO, JRNL AUTH 4 I.GARCIA-TORRES,H.REYES-VIVAS,J.ORIA-HERNANDEZ JRNL TITL CRYSTAL STRUCTURE OF HUMAN TRIOSEPHOSPHATE ISOMERASE (MUTANT JRNL TITL 2 N15D) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 34083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3040 - 4.5775 0.97 2808 168 0.1747 0.1891 REMARK 3 2 4.5775 - 3.6338 0.98 2740 125 0.1511 0.1680 REMARK 3 3 3.6338 - 3.1746 0.99 2680 160 0.1675 0.2255 REMARK 3 4 3.1746 - 2.8844 1.00 2733 136 0.1837 0.2292 REMARK 3 5 2.8844 - 2.6777 1.00 2688 136 0.2012 0.2674 REMARK 3 6 2.6777 - 2.5198 1.00 2671 134 0.1924 0.2762 REMARK 3 7 2.5198 - 2.3936 1.00 2703 135 0.1906 0.2577 REMARK 3 8 2.3936 - 2.2894 1.00 2670 134 0.1867 0.2473 REMARK 3 9 2.2894 - 2.2013 1.00 2679 149 0.1891 0.2345 REMARK 3 10 2.2013 - 2.1253 1.00 2690 135 0.1941 0.2453 REMARK 3 11 2.1253 - 2.0589 1.00 2639 167 0.1933 0.2482 REMARK 3 12 2.0589 - 2.0000 1.00 2659 144 0.2186 0.2816 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3739 REMARK 3 ANGLE : 1.024 5066 REMARK 3 CHIRALITY : 0.069 575 REMARK 3 PLANARITY : 0.004 655 REMARK 3 DIHEDRAL : 13.996 1351 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 2 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9600 21.7372 98.7114 REMARK 3 T TENSOR REMARK 3 T11: 0.0356 T22: 0.0732 REMARK 3 T33: 0.0538 T12: -0.0412 REMARK 3 T13: -0.0158 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.0600 L22: 0.0093 REMARK 3 L33: 0.0500 L12: 0.0179 REMARK 3 L13: -0.0083 L23: 0.0044 REMARK 3 S TENSOR REMARK 3 S11: 0.0430 S12: -0.1141 S13: -0.1176 REMARK 3 S21: 0.0081 S22: -0.0387 S23: -0.0101 REMARK 3 S31: 0.0321 S32: -0.0560 S33: -0.0077 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 65 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5926 41.1404 94.8092 REMARK 3 T TENSOR REMARK 3 T11: 0.1314 T22: 0.0776 REMARK 3 T33: 0.1647 T12: -0.0253 REMARK 3 T13: 0.0370 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.0002 L22: 0.0036 REMARK 3 L33: 0.0015 L12: 0.0004 REMARK 3 L13: -0.0008 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0230 S12: 0.0166 S13: 0.0372 REMARK 3 S21: -0.0279 S22: -0.0070 S23: -0.0234 REMARK 3 S31: -0.0338 S32: 0.0027 S33: -0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 86 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.0780 28.7673 84.8692 REMARK 3 T TENSOR REMARK 3 T11: -0.0049 T22: 0.1202 REMARK 3 T33: 0.0526 T12: -0.0618 REMARK 3 T13: 0.0367 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.2353 L22: 0.0473 REMARK 3 L33: 0.1024 L12: 0.0234 REMARK 3 L13: -0.0374 L23: -0.0687 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: 0.1526 S13: 0.0417 REMARK 3 S21: 0.0094 S22: 0.0195 S23: 0.0056 REMARK 3 S31: -0.0729 S32: 0.0867 S33: 0.2376 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 154 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.1559 16.9099 86.4397 REMARK 3 T TENSOR REMARK 3 T11: -0.0585 T22: 0.1091 REMARK 3 T33: 0.1273 T12: -0.0519 REMARK 3 T13: -0.0916 T23: -0.1452 REMARK 3 L TENSOR REMARK 3 L11: 0.0229 L22: 0.0252 REMARK 3 L33: 0.0634 L12: 0.0087 REMARK 3 L13: 0.0168 L23: 0.0117 REMARK 3 S TENSOR REMARK 3 S11: -0.0119 S12: 0.0949 S13: -0.1160 REMARK 3 S21: 0.0019 S22: -0.0646 S23: 0.0049 REMARK 3 S31: 0.0235 S32: -0.0172 S33: -0.1519 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 217 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2324 11.1622 90.8101 REMARK 3 T TENSOR REMARK 3 T11: 0.0578 T22: 0.0857 REMARK 3 T33: 0.2841 T12: -0.0627 REMARK 3 T13: -0.0788 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.0085 L22: 0.0216 REMARK 3 L33: 0.0138 L12: -0.0114 REMARK 3 L13: 0.0097 L23: -0.0157 REMARK 3 S TENSOR REMARK 3 S11: 0.0418 S12: 0.0053 S13: -0.0981 REMARK 3 S21: 0.0066 S22: 0.0491 S23: -0.0319 REMARK 3 S31: 0.0624 S32: -0.0143 S33: 0.1316 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 4 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5582 47.0196 99.7747 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.1975 REMARK 3 T33: 0.0511 T12: 0.0911 REMARK 3 T13: -0.0355 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 0.0501 L22: 0.1432 REMARK 3 L33: 0.1942 L12: 0.0628 REMARK 3 L13: -0.0347 L23: 0.0270 REMARK 3 S TENSOR REMARK 3 S11: -0.0422 S12: -0.0046 S13: 0.0058 REMARK 3 S21: -0.1071 S22: -0.0151 S23: -0.0107 REMARK 3 S31: -0.1300 S32: -0.0864 S33: -0.0755 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 73 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6164 56.5074 86.2938 REMARK 3 T TENSOR REMARK 3 T11: 0.3606 T22: 0.1252 REMARK 3 T33: -0.0233 T12: 0.0294 REMARK 3 T13: -0.1896 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 0.1850 L22: 0.0463 REMARK 3 L33: 0.1948 L12: -0.0322 REMARK 3 L13: 0.1409 L23: 0.0195 REMARK 3 S TENSOR REMARK 3 S11: -0.1999 S12: 0.1441 S13: 0.2013 REMARK 3 S21: -0.0477 S22: -0.1013 S23: -0.0559 REMARK 3 S31: -0.3504 S32: 0.0422 S33: -0.5895 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 171-176 OF CHAIN B, KNOWN AS REMARK 3 LOOP 6, ARE DISORDERED. REMARK 4 REMARK 4 4UNK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1290060792. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2JK2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM AMMONIUM ACETATE, 100 MM TRIS REMARK 280 PH 8.5, 25% V/VW/V POLYETHYLENE GLYCOL 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.81400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.21550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.35700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.21550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.81400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.35700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ALA A 1 REMARK 465 LYS A 247 REMARK 465 GLN A 248 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 ALA B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 246 REMARK 465 LYS B 247 REMARK 465 GLN B 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 196 -66.84 -124.92 REMARK 500 VAL B 196 -65.41 -122.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2025 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A2108 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH B2009 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B2010 DISTANCE = 6.28 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UNL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A SINGLE MUTANT (N71D) OF TRIOSEPHOSPHATE REMARK 900 ISOMERASE FROM HUMAN DBREF 4UNK A 1 248 UNP P60174 TPIS_HUMAN 39 286 DBREF 4UNK B 1 248 UNP P60174 TPIS_HUMAN 39 286 SEQADV 4UNK GLY A -1 UNP P60174 EXPRESSION TAG SEQADV 4UNK SER A 0 UNP P60174 EXPRESSION TAG SEQADV 4UNK ASP A 15 UNP P60174 ASN 53 ENGINEERED MUTATION SEQADV 4UNK GLY B -1 UNP P60174 EXPRESSION TAG SEQADV 4UNK SER B 0 UNP P60174 EXPRESSION TAG SEQADV 4UNK ASP B 15 UNP P60174 ASN 53 ENGINEERED MUTATION SEQRES 1 A 250 GLY SER ALA PRO SER ARG LYS PHE PHE VAL GLY GLY ASN SEQRES 2 A 250 TRP LYS MET ASP GLY ARG LYS GLN SER LEU GLY GLU LEU SEQRES 3 A 250 ILE GLY THR LEU ASN ALA ALA LYS VAL PRO ALA ASP THR SEQRES 4 A 250 GLU VAL VAL CYS ALA PRO PRO THR ALA TYR ILE ASP PHE SEQRES 5 A 250 ALA ARG GLN LYS LEU ASP PRO LYS ILE ALA VAL ALA ALA SEQRES 6 A 250 GLN ASN CYS TYR LYS VAL THR ASN GLY ALA PHE THR GLY SEQRES 7 A 250 GLU ILE SER PRO GLY MET ILE LYS ASP CYS GLY ALA THR SEQRES 8 A 250 TRP VAL VAL LEU GLY HIS SER GLU ARG ARG HIS VAL PHE SEQRES 9 A 250 GLY GLU SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS SEQRES 10 A 250 ALA LEU ALA GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY SEQRES 11 A 250 GLU LYS LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS SEQRES 12 A 250 VAL VAL PHE GLU GLN THR LYS VAL ILE ALA ASP ASN VAL SEQRES 13 A 250 LYS ASP TRP SER LYS VAL VAL LEU ALA TYR GLU PRO VAL SEQRES 14 A 250 TRP ALA ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN SEQRES 15 A 250 ALA GLN GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SEQRES 16 A 250 SER ASN VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE SEQRES 17 A 250 ILE TYR GLY GLY SER VAL THR GLY ALA THR CYS LYS GLU SEQRES 18 A 250 LEU ALA SER GLN PRO ASP VAL ASP GLY PHE LEU VAL GLY SEQRES 19 A 250 GLY ALA SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN SEQRES 20 A 250 ALA LYS GLN SEQRES 1 B 250 GLY SER ALA PRO SER ARG LYS PHE PHE VAL GLY GLY ASN SEQRES 2 B 250 TRP LYS MET ASP GLY ARG LYS GLN SER LEU GLY GLU LEU SEQRES 3 B 250 ILE GLY THR LEU ASN ALA ALA LYS VAL PRO ALA ASP THR SEQRES 4 B 250 GLU VAL VAL CYS ALA PRO PRO THR ALA TYR ILE ASP PHE SEQRES 5 B 250 ALA ARG GLN LYS LEU ASP PRO LYS ILE ALA VAL ALA ALA SEQRES 6 B 250 GLN ASN CYS TYR LYS VAL THR ASN GLY ALA PHE THR GLY SEQRES 7 B 250 GLU ILE SER PRO GLY MET ILE LYS ASP CYS GLY ALA THR SEQRES 8 B 250 TRP VAL VAL LEU GLY HIS SER GLU ARG ARG HIS VAL PHE SEQRES 9 B 250 GLY GLU SER ASP GLU LEU ILE GLY GLN LYS VAL ALA HIS SEQRES 10 B 250 ALA LEU ALA GLU GLY LEU GLY VAL ILE ALA CYS ILE GLY SEQRES 11 B 250 GLU LYS LEU ASP GLU ARG GLU ALA GLY ILE THR GLU LYS SEQRES 12 B 250 VAL VAL PHE GLU GLN THR LYS VAL ILE ALA ASP ASN VAL SEQRES 13 B 250 LYS ASP TRP SER LYS VAL VAL LEU ALA TYR GLU PRO VAL SEQRES 14 B 250 TRP ALA ILE GLY THR GLY LYS THR ALA THR PRO GLN GLN SEQRES 15 B 250 ALA GLN GLU VAL HIS GLU LYS LEU ARG GLY TRP LEU LYS SEQRES 16 B 250 SER ASN VAL SER ASP ALA VAL ALA GLN SER THR ARG ILE SEQRES 17 B 250 ILE TYR GLY GLY SER VAL THR GLY ALA THR CYS LYS GLU SEQRES 18 B 250 LEU ALA SER GLN PRO ASP VAL ASP GLY PHE LEU VAL GLY SEQRES 19 B 250 GLY ALA SER LEU LYS PRO GLU PHE VAL ASP ILE ILE ASN SEQRES 20 B 250 ALA LYS GLN FORMUL 3 HOH *452(H2 O) HELIX 1 1 ARG A 17 ALA A 31 1 15 HELIX 2 2 PRO A 44 ILE A 48 5 5 HELIX 3 3 PHE A 50 LYS A 54 5 5 HELIX 4 4 SER A 79 CYS A 86 1 8 HELIX 5 5 HIS A 95 VAL A 101 1 7 HELIX 6 6 SER A 105 GLU A 119 1 15 HELIX 7 7 LYS A 130 ALA A 136 1 7 HELIX 8 8 ILE A 138 ASP A 152 1 15 HELIX 9 9 ASP A 156 SER A 158 5 3 HELIX 10 10 PRO A 166 ILE A 170 5 5 HELIX 11 11 THR A 177 VAL A 196 1 20 HELIX 12 12 SER A 197 THR A 204 1 8 HELIX 13 13 THR A 216 SER A 222 1 7 HELIX 14 14 GLY A 232 LYS A 237 5 6 HELIX 15 15 PRO A 238 ASN A 245 1 8 HELIX 16 16 ARG B 17 ALA B 30 1 14 HELIX 17 17 PRO B 44 ALA B 46 5 3 HELIX 18 18 TYR B 47 LEU B 55 1 9 HELIX 19 19 SER B 79 CYS B 86 1 8 HELIX 20 20 HIS B 95 VAL B 101 1 7 HELIX 21 21 SER B 105 GLU B 119 1 15 HELIX 22 22 LYS B 130 ALA B 136 1 7 HELIX 23 23 ILE B 138 ASN B 153 1 16 HELIX 24 24 ASP B 156 SER B 158 5 3 HELIX 25 25 PRO B 166 ILE B 170 5 5 HELIX 26 26 THR B 177 VAL B 196 1 20 HELIX 27 27 SER B 197 THR B 204 1 8 HELIX 28 28 THR B 216 SER B 222 1 7 HELIX 29 29 GLY B 232 LYS B 237 5 6 HELIX 30 30 PRO B 238 ASN B 245 1 8 SHEET 1 AA 9 PHE A 6 ASN A 11 0 SHEET 2 AA 9 THR A 37 ALA A 42 1 O GLU A 38 N VAL A 8 SHEET 3 AA 9 ALA A 60 ALA A 63 1 O ALA A 60 N CYS A 41 SHEET 4 AA 9 TRP A 90 LEU A 93 1 O TRP A 90 N ALA A 63 SHEET 5 AA 9 GLY A 122 ILE A 127 1 O GLY A 122 N VAL A 91 SHEET 6 AA 9 VAL A 160 TYR A 164 1 O VAL A 161 N ALA A 125 SHEET 7 AA 9 ILE A 206 TYR A 208 1 O ILE A 207 N TYR A 164 SHEET 8 AA 9 GLY A 228 VAL A 231 1 O GLY A 228 N TYR A 208 SHEET 9 AA 9 PHE A 6 ASN A 11 1 O PHE A 7 N PHE A 229 SHEET 1 BA 9 PHE B 6 ASN B 11 0 SHEET 2 BA 9 THR B 37 ALA B 42 1 O GLU B 38 N VAL B 8 SHEET 3 BA 9 ILE B 59 ALA B 63 1 O ALA B 60 N CYS B 41 SHEET 4 BA 9 TRP B 90 LEU B 93 1 O TRP B 90 N ALA B 63 SHEET 5 BA 9 GLY B 122 ILE B 127 1 O GLY B 122 N VAL B 91 SHEET 6 BA 9 VAL B 160 TYR B 164 1 O VAL B 161 N ALA B 125 SHEET 7 BA 9 ILE B 206 TYR B 208 1 O ILE B 207 N TYR B 164 SHEET 8 BA 9 GLY B 228 VAL B 231 1 O GLY B 228 N TYR B 208 SHEET 9 BA 9 PHE B 6 ASN B 11 1 O PHE B 7 N PHE B 229 CRYST1 47.628 70.714 146.431 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020996 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006829 0.00000 MTRIX1 1 -0.636100 0.225400 -0.737900 24.83280 1 MTRIX2 1 0.239800 -0.851300 -0.466700 53.58930 1 MTRIX3 1 -0.733400 -0.473800 0.487500 90.32330 1