data_4UOM # _entry.id 4UOM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4UOM PDBE EBI-60879 WWPDB D_1290060879 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4UOK unspecified 'ELECTRON CRYO-MICROSCOPY OF VENEZUELAN EQUINE ENCEPHALITIS VIRUS TC-83 IN COMPLEX WITH NEUTRALIZING ANTIBODY FAB 3B4C-4' EMDB EMD-2645 'associated EM volume' . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4UOM _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-06-05 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Porta, J.' 1 'Jose, J.' 2 'Roehrig, J.T.' 3 'Blair, C.D.' 4 'Kuhn, R.J.' 5 'Rossmann, M.G.' 6 # _citation.id primary _citation.title 'Locking and Blocking the Viral Landscape of an Alphavirus with Neutralizing Antibodies.' _citation.journal_abbrev J.Virol. _citation.journal_volume 88 _citation.page_first 9616 _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24920796 _citation.pdbx_database_id_DOI 10.1128/JVI.01286-14 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Porta, J.' 1 primary 'Jose, J.' 2 primary 'Roehrig, J.T.' 3 primary 'Blair, C.D.' 4 primary 'Kuhn, R.J.' 5 primary 'Rossmann, M.G.' 6 # _cell.entry_id 4UOM _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UOM _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FAB FRAGMENT HEAVY CHAIN' 23376.186 1 ? ? ? ? 2 polymer man 'FAB FRAGMENT LIGHT CHAIN' 22177.174 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EVQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGRIYPGYGNTKYNDKFKGKATLTEDTSSNTAY MQLNSLTSEDTAVYFCARSLTFFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD ; ;EVQLQQSGPELVKPGASVKISCKASGYTFTDYYINWMKQKPGQGLEWIGRIYPGYGNTKYNDKFKGKATLTEDTSSNTAY MQLNSLTSEDTAVYFCARSLTFFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD ; H ? 2 'polypeptide(L)' no no ;PHSASGPPDQTVTISCSGSSSNIEGNTVNWYQQFPGKAPQLLIYGKDQRPSGVPDRFSASKSGTSASLTISGLQAEDEAD YYCAAWDDSLNGWVFGGGTKLTVLGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR ; ;PHSASGPPDQTVTISCSGSSSNIEGNTVNWYQQFPGKAPQLLIYGKDQRPSGVPDRFSASKSGTSASLTISGLQAEDEAD YYCAAWDDSLNGWVFGGGTKLTVLGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLN n 1 7 SER n 1 8 GLY n 1 9 PRO n 1 10 GLU n 1 11 LEU n 1 12 VAL n 1 13 LYS n 1 14 PRO n 1 15 GLY n 1 16 ALA n 1 17 SER n 1 18 VAL n 1 19 LYS n 1 20 ILE n 1 21 SER n 1 22 CYS n 1 23 LYS n 1 24 ALA n 1 25 SER n 1 26 GLY n 1 27 TYR n 1 28 THR n 1 29 PHE n 1 30 THR n 1 31 ASP n 1 32 TYR n 1 33 TYR n 1 34 ILE n 1 35 ASN n 1 36 TRP n 1 37 MET n 1 38 LYS n 1 39 GLN n 1 40 LYS n 1 41 PRO n 1 42 GLY n 1 43 GLN n 1 44 GLY n 1 45 LEU n 1 46 GLU n 1 47 TRP n 1 48 ILE n 1 49 GLY n 1 50 ARG n 1 51 ILE n 1 52 TYR n 1 53 PRO n 1 54 GLY n 1 55 TYR n 1 56 GLY n 1 57 ASN n 1 58 THR n 1 59 LYS n 1 60 TYR n 1 61 ASN n 1 62 ASP n 1 63 LYS n 1 64 PHE n 1 65 LYS n 1 66 GLY n 1 67 LYS n 1 68 ALA n 1 69 THR n 1 70 LEU n 1 71 THR n 1 72 GLU n 1 73 ASP n 1 74 THR n 1 75 SER n 1 76 SER n 1 77 ASN n 1 78 THR n 1 79 ALA n 1 80 TYR n 1 81 MET n 1 82 GLN n 1 83 LEU n 1 84 ASN n 1 85 SER n 1 86 LEU n 1 87 THR n 1 88 SER n 1 89 GLU n 1 90 ASP n 1 91 THR n 1 92 ALA n 1 93 VAL n 1 94 TYR n 1 95 PHE n 1 96 CYS n 1 97 ALA n 1 98 ARG n 1 99 SER n 1 100 LEU n 1 101 THR n 1 102 PHE n 1 103 PHE n 1 104 ASP n 1 105 VAL n 1 106 TRP n 1 107 GLY n 1 108 ALA n 1 109 GLY n 1 110 THR n 1 111 THR n 1 112 VAL n 1 113 THR n 1 114 VAL n 1 115 SER n 1 116 SER n 1 117 ALA n 1 118 LYS n 1 119 THR n 1 120 THR n 1 121 PRO n 1 122 PRO n 1 123 SER n 1 124 VAL n 1 125 TYR n 1 126 PRO n 1 127 LEU n 1 128 ALA n 1 129 PRO n 1 130 GLY n 1 131 SER n 1 132 ALA n 1 133 ALA n 1 134 GLN n 1 135 THR n 1 136 ASN n 1 137 SER n 1 138 MET n 1 139 VAL n 1 140 THR n 1 141 LEU n 1 142 GLY n 1 143 CYS n 1 144 LEU n 1 145 VAL n 1 146 LYS n 1 147 GLY n 1 148 TYR n 1 149 PHE n 1 150 PRO n 1 151 GLU n 1 152 PRO n 1 153 VAL n 1 154 THR n 1 155 VAL n 1 156 THR n 1 157 TRP n 1 158 ASN n 1 159 SER n 1 160 GLY n 1 161 SER n 1 162 LEU n 1 163 SER n 1 164 SER n 1 165 GLY n 1 166 VAL n 1 167 HIS n 1 168 THR n 1 169 PHE n 1 170 PRO n 1 171 ALA n 1 172 VAL n 1 173 LEU n 1 174 GLN n 1 175 SER n 1 176 ASP n 1 177 LEU n 1 178 TYR n 1 179 THR n 1 180 LEU n 1 181 SER n 1 182 SER n 1 183 SER n 1 184 VAL n 1 185 THR n 1 186 VAL n 1 187 PRO n 1 188 SER n 1 189 SER n 1 190 THR n 1 191 TRP n 1 192 PRO n 1 193 SER n 1 194 GLU n 1 195 THR n 1 196 VAL n 1 197 THR n 1 198 CYS n 1 199 ASN n 1 200 VAL n 1 201 ALA n 1 202 HIS n 1 203 PRO n 1 204 ALA n 1 205 SER n 1 206 SER n 1 207 THR n 1 208 LYS n 1 209 VAL n 1 210 ASP n 1 211 LYS n 1 212 LYS n 1 213 ILE n 1 214 VAL n 1 215 PRO n 1 216 ARG n 1 217 ASP n 2 1 PRO n 2 2 HIS n 2 3 SER n 2 4 ALA n 2 5 SER n 2 6 GLY n 2 7 PRO n 2 8 PRO n 2 9 ASP n 2 10 GLN n 2 11 THR n 2 12 VAL n 2 13 THR n 2 14 ILE n 2 15 SER n 2 16 CYS n 2 17 SER n 2 18 GLY n 2 19 SER n 2 20 SER n 2 21 SER n 2 22 ASN n 2 23 ILE n 2 24 GLU n 2 25 GLY n 2 26 ASN n 2 27 THR n 2 28 VAL n 2 29 ASN n 2 30 TRP n 2 31 TYR n 2 32 GLN n 2 33 GLN n 2 34 PHE n 2 35 PRO n 2 36 GLY n 2 37 LYS n 2 38 ALA n 2 39 PRO n 2 40 GLN n 2 41 LEU n 2 42 LEU n 2 43 ILE n 2 44 TYR n 2 45 GLY n 2 46 LYS n 2 47 ASP n 2 48 GLN n 2 49 ARG n 2 50 PRO n 2 51 SER n 2 52 GLY n 2 53 VAL n 2 54 PRO n 2 55 ASP n 2 56 ARG n 2 57 PHE n 2 58 SER n 2 59 ALA n 2 60 SER n 2 61 LYS n 2 62 SER n 2 63 GLY n 2 64 THR n 2 65 SER n 2 66 ALA n 2 67 SER n 2 68 LEU n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 GLY n 2 73 LEU n 2 74 GLN n 2 75 ALA n 2 76 GLU n 2 77 ASP n 2 78 GLU n 2 79 ALA n 2 80 ASP n 2 81 TYR n 2 82 TYR n 2 83 CYS n 2 84 ALA n 2 85 ALA n 2 86 TRP n 2 87 ASP n 2 88 ASP n 2 89 SER n 2 90 LEU n 2 91 ASN n 2 92 GLY n 2 93 TRP n 2 94 VAL n 2 95 PHE n 2 96 GLY n 2 97 GLY n 2 98 GLY n 2 99 THR n 2 100 LYS n 2 101 LEU n 2 102 THR n 2 103 VAL n 2 104 LEU n 2 105 GLY n 2 106 ALA n 2 107 PRO n 2 108 THR n 2 109 VAL n 2 110 SER n 2 111 ILE n 2 112 PHE n 2 113 PRO n 2 114 PRO n 2 115 SER n 2 116 SER n 2 117 GLU n 2 118 GLN n 2 119 LEU n 2 120 THR n 2 121 SER n 2 122 GLY n 2 123 GLY n 2 124 ALA n 2 125 SER n 2 126 VAL n 2 127 VAL n 2 128 CYS n 2 129 PHE n 2 130 LEU n 2 131 ASN n 2 132 ASN n 2 133 PHE n 2 134 TYR n 2 135 PRO n 2 136 LYS n 2 137 ASP n 2 138 ILE n 2 139 ASN n 2 140 VAL n 2 141 LYS n 2 142 TRP n 2 143 LYS n 2 144 ILE n 2 145 ASP n 2 146 GLY n 2 147 SER n 2 148 GLU n 2 149 ARG n 2 150 GLN n 2 151 ASN n 2 152 GLY n 2 153 VAL n 2 154 LEU n 2 155 ASN n 2 156 SER n 2 157 TRP n 2 158 THR n 2 159 ASP n 2 160 GLN n 2 161 ASP n 2 162 SER n 2 163 LYS n 2 164 ASP n 2 165 SER n 2 166 THR n 2 167 TYR n 2 168 SER n 2 169 MET n 2 170 SER n 2 171 SER n 2 172 THR n 2 173 LEU n 2 174 THR n 2 175 LEU n 2 176 THR n 2 177 LYS n 2 178 ASP n 2 179 GLU n 2 180 TYR n 2 181 GLU n 2 182 ARG n 2 183 HIS n 2 184 ASN n 2 185 SER n 2 186 TYR n 2 187 THR n 2 188 CYS n 2 189 GLU n 2 190 ALA n 2 191 THR n 2 192 HIS n 2 193 LYS n 2 194 THR n 2 195 SER n 2 196 THR n 2 197 SER n 2 198 PRO n 2 199 ILE n 2 200 VAL n 2 201 LYS n 2 202 SER n 2 203 PHE n 2 204 ASN n 2 205 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 511693 ? ? ? ? ? ? BL21 ? ? ? ? ? ? ? PLASMID PAEV1 ? ? ? ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 511693 ? ? ? ? ? ? BL21 ? ? ? ? ? ? ? PLASMID PAEV1 ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 4UOM 1 ? ? 4UOM ? 2 PDB 4UOM 2 ? ? 4UOM ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4UOM H 1 ? 217 ? 4UOM 1 ? 217 ? 1 217 2 2 4UOM L 1 ? 205 ? 4UOM 7 ? 211 ? 7 211 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4UOM _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 4UOM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 17.00 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3206 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3206 _refine_hist.d_res_high 17.00 _refine_hist.d_res_low . # _struct.entry_id 4UOM _struct.title 'Electron Cryo-microscopy of Venezuelan Equine Encephalitis Virus TC- 83 in complex with neutralizing antibody Fab F5' _struct.pdbx_descriptor 'FAB FRAGMENT HEAVY CHAIN, FAB FRAGMENT LIGHT CHAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4UOM _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'VIRAL PROTEIN, ALPHAVIRUS, VENEZUELAN, ANTIBODY NEUTRALIZATION, FAB' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? TYR A 32 ? THR H 28 TYR H 32 5 ? 5 HELX_P HELX_P2 2 ASP A 62 ? PHE A 64 ? ASP H 62 PHE H 64 5 ? 3 HELX_P HELX_P3 3 THR A 87 ? THR A 91 ? THR H 87 THR H 91 5 ? 5 HELX_P HELX_P4 4 SER A 159 ? SER A 161 ? SER H 159 SER H 161 5 ? 3 HELX_P HELX_P5 5 PRO A 203 ? SER A 206 ? PRO H 203 SER H 206 5 ? 4 HELX_P HELX_P6 6 GLN B 74 ? GLU B 78 ? GLN L 80 GLU L 84 5 ? 5 HELX_P HELX_P7 7 SER B 115 ? THR B 120 ? SER L 121 THR L 126 1 ? 6 HELX_P HELX_P8 8 LYS B 177 ? GLU B 181 ? LYS L 183 GLU L 187 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? B CYS 16 SG ? ? ? 1_555 B CYS 83 SG ? ? L CYS 22 L CYS 89 1_555 ? ? ? ? ? ? ? 2.037 ? disulf2 disulf ? ? B CYS 128 SG ? ? ? 1_555 B CYS 188 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 1.967 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 101 A . ? THR 101 H PHE 102 A ? PHE 102 H 1 -27.45 2 PHE 149 A . ? PHE 149 H PRO 150 A ? PRO 150 H 1 -3.16 3 GLU 151 A . ? GLU 151 H PRO 152 A ? PRO 152 H 1 -1.78 4 TRP 191 A . ? TRP 191 H PRO 192 A ? PRO 192 H 1 -0.91 5 ASN 26 B . ? ASN 32 L THR 27 B ? THR 33 L 1 -25.99 6 ASN 91 B . ? ASN 97 L GLY 92 B ? GLY 98 L 1 1.90 7 TYR 134 B . ? TYR 140 L PRO 135 B ? PRO 141 L 1 0.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details HA ? 4 ? HB ? 4 ? HC ? 6 ? HD ? 2 ? HE ? 4 ? HF ? 4 ? HG ? 2 ? HH ? 3 ? LA ? 3 ? LB ? 3 ? LC ? 4 ? LD ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense HA 1 2 ? anti-parallel HA 2 3 ? anti-parallel HA 3 4 ? anti-parallel HB 1 2 ? anti-parallel HB 2 3 ? anti-parallel HB 3 4 ? anti-parallel HC 1 2 ? anti-parallel HC 2 3 ? anti-parallel HC 3 4 ? anti-parallel HC 4 5 ? anti-parallel HC 5 6 ? anti-parallel HD 1 2 ? anti-parallel HE 1 2 ? anti-parallel HE 2 3 ? anti-parallel HE 3 4 ? parallel HF 1 2 ? anti-parallel HF 2 3 ? anti-parallel HF 3 4 ? anti-parallel HG 1 2 ? parallel HH 1 2 ? anti-parallel HH 2 3 ? anti-parallel LA 1 2 ? anti-parallel LA 2 3 ? anti-parallel LB 1 2 ? anti-parallel LB 2 3 ? anti-parallel LC 1 2 ? anti-parallel LC 2 3 ? anti-parallel LC 3 4 ? anti-parallel LD 1 2 ? anti-parallel LD 2 3 ? anti-parallel LD 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id HA 1 GLN A 3 ? SER A 7 ? GLN H 3 SER H 7 HA 2 VAL A 18 ? SER A 25 ? VAL H 18 SER H 25 HA 3 THR A 78 ? LEU A 83 ? THR H 78 LEU H 83 HA 4 ALA A 68 ? ASP A 73 ? ALA H 68 ASP H 73 HB 1 GLU A 10 ? VAL A 12 ? GLU H 10 VAL H 12 HB 2 THR A 110 ? VAL A 114 ? THR H 110 VAL H 114 HB 3 ALA A 92 ? SER A 99 ? ALA H 92 SER H 99 HB 4 PHE A 103 ? TRP A 106 ? PHE H 103 TRP H 106 HC 1 GLU A 10 ? VAL A 12 ? GLU H 10 VAL H 12 HC 2 THR A 110 ? VAL A 114 ? THR H 110 VAL H 114 HC 3 ALA A 92 ? SER A 99 ? ALA H 92 SER H 99 HC 4 ILE A 34 ? GLN A 39 ? ILE H 34 GLN H 39 HC 5 LEU A 45 ? ILE A 51 ? LEU H 45 ILE H 51 HC 6 LYS A 59 ? TYR A 60 ? LYS H 59 TYR H 60 HD 1 PHE A 103 ? TRP A 106 ? PHE H 103 TRP H 106 HD 2 ALA A 92 ? SER A 99 ? ALA H 92 SER H 99 HE 1 SER A 123 ? LEU A 127 ? SER H 123 LEU H 127 HE 2 MET A 138 ? TYR A 148 ? MET H 138 TYR H 148 HE 3 LEU A 177 ? PRO A 187 ? LEU H 177 PRO H 187 HE 4 VAL A 172 ? GLN A 174 ? VAL H 172 GLN H 174 HF 1 SER A 123 ? LEU A 127 ? SER H 123 LEU H 127 HF 2 MET A 138 ? TYR A 148 ? MET H 138 TYR H 148 HF 3 LEU A 177 ? PRO A 187 ? LEU H 177 PRO H 187 HF 4 VAL A 166 ? THR A 168 ? VAL H 166 THR H 168 HG 1 VAL A 172 ? GLN A 174 ? VAL H 172 GLN H 174 HG 2 LEU A 177 ? PRO A 187 ? LEU H 177 PRO H 187 HH 1 THR A 154 ? TRP A 157 ? THR H 154 TRP H 157 HH 2 THR A 197 ? HIS A 202 ? THR H 197 HIS H 202 HH 3 THR A 207 ? LYS A 212 ? THR H 207 LYS H 212 LA 1 VAL B 12 ? SER B 17 ? VAL L 18 SER L 23 LA 2 SER B 65 ? ILE B 70 ? SER L 71 ILE L 76 LA 3 PHE B 57 ? SER B 62 ? PHE L 63 SER L 68 LB 1 GLN B 40 ? ILE B 43 ? GLN L 46 ILE L 49 LB 2 VAL B 28 ? GLN B 33 ? VAL L 34 GLN L 39 LB 3 ASP B 80 ? ALA B 85 ? ASP L 86 ALA L 91 LC 1 ILE B 111 ? PHE B 112 ? ILE L 117 PHE L 118 LC 2 GLY B 123 ? CYS B 128 ? GLY L 129 CYS L 134 LC 3 MET B 169 ? THR B 176 ? MET L 175 THR L 182 LC 4 VAL B 153 ? TRP B 157 ? VAL L 159 TRP L 163 LD 1 SER B 147 ? ARG B 149 ? SER L 153 ARG L 155 LD 2 ASN B 139 ? ILE B 144 ? ASN L 145 ILE L 150 LD 3 SER B 185 ? THR B 191 ? SER L 191 THR L 197 LD 4 ILE B 199 ? ASN B 204 ? ILE L 205 ASN L 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id HA 1 2 N SER A 7 ? N SER H 7 O SER A 21 ? O SER H 21 HA 2 3 N CYS A 22 ? N CYS H 22 O ALA A 79 ? O ALA H 79 HA 3 4 N GLN A 82 ? N GLN H 82 O THR A 69 ? O THR H 69 HB 1 2 N VAL A 12 ? N VAL H 12 O THR A 113 ? O THR H 113 HB 2 3 N VAL A 112 ? N VAL H 112 O ALA A 92 ? O ALA H 92 HB 3 4 N ARG A 98 ? N ARG H 98 O VAL A 105 ? O VAL H 105 HC 1 2 N VAL A 12 ? N VAL H 12 O THR A 113 ? O THR H 113 HC 2 3 N VAL A 112 ? N VAL H 112 O ALA A 92 ? O ALA H 92 HC 3 4 N ALA A 97 ? N ALA H 97 O ASN A 35 ? O ASN H 35 HC 4 5 N LYS A 38 ? N LYS H 38 O GLU A 46 ? O GLU H 46 HC 5 6 N ARG A 50 ? N ARG H 50 O LYS A 59 ? O LYS H 59 HD 1 2 N ASP A 104 ? N ASP H 104 O ARG A 98 ? O ARG H 98 HE 1 2 N LEU A 127 ? N LEU H 127 O GLY A 142 ? O GLY H 142 HE 2 3 N TYR A 148 ? N TYR H 148 O TYR A 178 ? O TYR H 178 HE 3 4 N THR A 179 ? N THR H 179 O VAL A 172 ? O VAL H 172 HF 1 2 N LEU A 127 ? N LEU H 127 O GLY A 142 ? O GLY H 142 HF 2 3 N TYR A 148 ? N TYR H 148 O TYR A 178 ? O TYR H 178 HF 3 4 N SER A 183 ? N SER H 183 O HIS A 167 ? O HIS H 167 HG 1 2 N GLN A 174 ? N GLN H 174 O LEU A 177 ? O LEU H 177 HH 1 2 N THR A 156 ? N THR H 156 O ASN A 199 ? O ASN H 199 HH 2 3 N HIS A 202 ? N HIS H 202 O THR A 207 ? O THR H 207 LA 1 2 N CYS B 16 ? N CYS L 22 O ALA B 66 ? O ALA L 72 LA 2 3 N THR B 69 ? N THR L 75 O SER B 58 ? O SER L 64 LB 1 2 N LEU B 42 ? N LEU L 48 O TRP B 30 ? O TRP L 36 LB 2 3 N GLN B 33 ? N GLN L 39 O ASP B 80 ? O ASP L 86 LC 1 2 N PHE B 112 ? N PHE L 118 O VAL B 127 ? O VAL L 133 LC 2 3 N CYS B 128 ? N CYS L 134 O SER B 171 ? O SER L 177 LC 3 4 N THR B 172 ? N THR L 178 O LEU B 154 ? O LEU L 160 LD 1 2 N ARG B 149 ? N ARG L 155 O TRP B 142 ? O TRP L 148 LD 2 3 N LYS B 143 ? N LYS L 149 O THR B 187 ? O THR L 193 LD 3 4 N ALA B 190 ? N ALA L 196 O ILE B 199 ? O ILE L 205 # _database_PDB_matrix.entry_id 4UOM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4UOM _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.text 'SER L 9 C-ALPHA IS PLANAR ALA L 10 C-ALPHA IS PLANAR ALA L 112 C-ALPHA IS PLANAR PHE L 135 C-ALPHA IS PLANAR' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU H . n A 1 2 VAL 2 2 2 VAL VAL H . n A 1 3 GLN 3 3 3 GLN GLN H . n A 1 4 LEU 4 4 4 LEU LEU H . n A 1 5 GLN 5 5 5 GLN GLN H . n A 1 6 GLN 6 6 6 GLN GLN H . n A 1 7 SER 7 7 7 SER SER H . n A 1 8 GLY 8 8 8 GLY GLY H . n A 1 9 PRO 9 9 9 PRO PRO H . n A 1 10 GLU 10 10 10 GLU GLU H . n A 1 11 LEU 11 11 11 LEU LEU H . n A 1 12 VAL 12 12 12 VAL VAL H . n A 1 13 LYS 13 13 13 LYS LYS H . n A 1 14 PRO 14 14 14 PRO PRO H . n A 1 15 GLY 15 15 15 GLY GLY H . n A 1 16 ALA 16 16 16 ALA ALA H . n A 1 17 SER 17 17 17 SER SER H . n A 1 18 VAL 18 18 18 VAL VAL H . n A 1 19 LYS 19 19 19 LYS LYS H . n A 1 20 ILE 20 20 20 ILE ILE H . n A 1 21 SER 21 21 21 SER SER H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 LYS 23 23 23 LYS LYS H . n A 1 24 ALA 24 24 24 ALA ALA H . n A 1 25 SER 25 25 25 SER SER H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 TYR 27 27 27 TYR TYR H . n A 1 28 THR 28 28 28 THR THR H . n A 1 29 PHE 29 29 29 PHE PHE H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 ASP 31 31 31 ASP ASP H . n A 1 32 TYR 32 32 32 TYR TYR H . n A 1 33 TYR 33 33 33 TYR TYR H . n A 1 34 ILE 34 34 34 ILE ILE H . n A 1 35 ASN 35 35 35 ASN ASN H . n A 1 36 TRP 36 36 36 TRP TRP H . n A 1 37 MET 37 37 37 MET MET H . n A 1 38 LYS 38 38 38 LYS LYS H . n A 1 39 GLN 39 39 39 GLN GLN H . n A 1 40 LYS 40 40 40 LYS LYS H . n A 1 41 PRO 41 41 41 PRO PRO H . n A 1 42 GLY 42 42 42 GLY GLY H . n A 1 43 GLN 43 43 43 GLN GLN H . n A 1 44 GLY 44 44 44 GLY GLY H . n A 1 45 LEU 45 45 45 LEU LEU H . n A 1 46 GLU 46 46 46 GLU GLU H . n A 1 47 TRP 47 47 47 TRP TRP H . n A 1 48 ILE 48 48 48 ILE ILE H . n A 1 49 GLY 49 49 49 GLY GLY H . n A 1 50 ARG 50 50 50 ARG ARG H . n A 1 51 ILE 51 51 51 ILE ILE H . n A 1 52 TYR 52 52 52 TYR TYR H . n A 1 53 PRO 53 53 53 PRO PRO H . n A 1 54 GLY 54 54 54 GLY GLY H . n A 1 55 TYR 55 55 55 TYR TYR H . n A 1 56 GLY 56 56 56 GLY GLY H . n A 1 57 ASN 57 57 57 ASN ASN H . n A 1 58 THR 58 58 58 THR THR H . n A 1 59 LYS 59 59 59 LYS LYS H . n A 1 60 TYR 60 60 60 TYR TYR H . n A 1 61 ASN 61 61 61 ASN ASN H . n A 1 62 ASP 62 62 62 ASP ASP H . n A 1 63 LYS 63 63 63 LYS LYS H . n A 1 64 PHE 64 64 64 PHE PHE H . n A 1 65 LYS 65 65 65 LYS LYS H . n A 1 66 GLY 66 66 66 GLY GLY H . n A 1 67 LYS 67 67 67 LYS LYS H . n A 1 68 ALA 68 68 68 ALA ALA H . n A 1 69 THR 69 69 69 THR THR H . n A 1 70 LEU 70 70 70 LEU LEU H . n A 1 71 THR 71 71 71 THR THR H . n A 1 72 GLU 72 72 72 GLU GLU H . n A 1 73 ASP 73 73 73 ASP ASP H . n A 1 74 THR 74 74 74 THR THR H . n A 1 75 SER 75 75 75 SER SER H . n A 1 76 SER 76 76 76 SER SER H . n A 1 77 ASN 77 77 77 ASN ASN H . n A 1 78 THR 78 78 78 THR THR H . n A 1 79 ALA 79 79 79 ALA ALA H . n A 1 80 TYR 80 80 80 TYR TYR H . n A 1 81 MET 81 81 81 MET MET H . n A 1 82 GLN 82 82 82 GLN GLN H . n A 1 83 LEU 83 83 83 LEU LEU H . n A 1 84 ASN 84 84 84 ASN ASN H . n A 1 85 SER 85 85 85 SER SER H . n A 1 86 LEU 86 86 86 LEU LEU H . n A 1 87 THR 87 87 87 THR THR H . n A 1 88 SER 88 88 88 SER SER H . n A 1 89 GLU 89 89 89 GLU GLU H . n A 1 90 ASP 90 90 90 ASP ASP H . n A 1 91 THR 91 91 91 THR THR H . n A 1 92 ALA 92 92 92 ALA ALA H . n A 1 93 VAL 93 93 93 VAL VAL H . n A 1 94 TYR 94 94 94 TYR TYR H . n A 1 95 PHE 95 95 95 PHE PHE H . n A 1 96 CYS 96 96 96 CYS CYS H . n A 1 97 ALA 97 97 97 ALA ALA H . n A 1 98 ARG 98 98 98 ARG ARG H . n A 1 99 SER 99 99 99 SER SER H . n A 1 100 LEU 100 100 100 LEU LEU H . n A 1 101 THR 101 101 101 THR THR H . n A 1 102 PHE 102 102 102 PHE PHE H . n A 1 103 PHE 103 103 103 PHE PHE H . n A 1 104 ASP 104 104 104 ASP ASP H . n A 1 105 VAL 105 105 105 VAL VAL H . n A 1 106 TRP 106 106 106 TRP TRP H . n A 1 107 GLY 107 107 107 GLY GLY H . n A 1 108 ALA 108 108 108 ALA ALA H . n A 1 109 GLY 109 109 109 GLY GLY H . n A 1 110 THR 110 110 110 THR THR H . n A 1 111 THR 111 111 111 THR THR H . n A 1 112 VAL 112 112 112 VAL VAL H . n A 1 113 THR 113 113 113 THR THR H . n A 1 114 VAL 114 114 114 VAL VAL H . n A 1 115 SER 115 115 115 SER SER H . n A 1 116 SER 116 116 116 SER SER H . n A 1 117 ALA 117 117 117 ALA ALA H . n A 1 118 LYS 118 118 118 LYS LYS H . n A 1 119 THR 119 119 119 THR THR H . n A 1 120 THR 120 120 120 THR THR H . n A 1 121 PRO 121 121 121 PRO PRO H . n A 1 122 PRO 122 122 122 PRO PRO H . n A 1 123 SER 123 123 123 SER SER H . n A 1 124 VAL 124 124 124 VAL VAL H . n A 1 125 TYR 125 125 125 TYR TYR H . n A 1 126 PRO 126 126 126 PRO PRO H . n A 1 127 LEU 127 127 127 LEU LEU H . n A 1 128 ALA 128 128 128 ALA ALA H . n A 1 129 PRO 129 129 129 PRO PRO H . n A 1 130 GLY 130 130 130 GLY GLY H . n A 1 131 SER 131 131 131 SER SER H . n A 1 132 ALA 132 132 132 ALA ALA H . n A 1 133 ALA 133 133 133 ALA ALA H . n A 1 134 GLN 134 134 134 GLN GLN H . n A 1 135 THR 135 135 135 THR THR H . n A 1 136 ASN 136 136 136 ASN ASN H . n A 1 137 SER 137 137 137 SER SER H . n A 1 138 MET 138 138 138 MET MET H . n A 1 139 VAL 139 139 139 VAL VAL H . n A 1 140 THR 140 140 140 THR THR H . n A 1 141 LEU 141 141 141 LEU LEU H . n A 1 142 GLY 142 142 142 GLY GLY H . n A 1 143 CYS 143 143 143 CYS CYS H . n A 1 144 LEU 144 144 144 LEU LEU H . n A 1 145 VAL 145 145 145 VAL VAL H . n A 1 146 LYS 146 146 146 LYS LYS H . n A 1 147 GLY 147 147 147 GLY GLY H . n A 1 148 TYR 148 148 148 TYR TYR H . n A 1 149 PHE 149 149 149 PHE PHE H . n A 1 150 PRO 150 150 150 PRO PRO H . n A 1 151 GLU 151 151 151 GLU GLU H . n A 1 152 PRO 152 152 152 PRO PRO H . n A 1 153 VAL 153 153 153 VAL VAL H . n A 1 154 THR 154 154 154 THR THR H . n A 1 155 VAL 155 155 155 VAL VAL H . n A 1 156 THR 156 156 156 THR THR H . n A 1 157 TRP 157 157 157 TRP TRP H . n A 1 158 ASN 158 158 158 ASN ASN H . n A 1 159 SER 159 159 159 SER SER H . n A 1 160 GLY 160 160 160 GLY GLY H . n A 1 161 SER 161 161 161 SER SER H . n A 1 162 LEU 162 162 162 LEU LEU H . n A 1 163 SER 163 163 163 SER SER H . n A 1 164 SER 164 164 164 SER SER H . n A 1 165 GLY 165 165 165 GLY GLY H . n A 1 166 VAL 166 166 166 VAL VAL H . n A 1 167 HIS 167 167 167 HIS HIS H . n A 1 168 THR 168 168 168 THR THR H . n A 1 169 PHE 169 169 169 PHE PHE H . n A 1 170 PRO 170 170 170 PRO PRO H . n A 1 171 ALA 171 171 171 ALA ALA H . n A 1 172 VAL 172 172 172 VAL VAL H . n A 1 173 LEU 173 173 173 LEU LEU H . n A 1 174 GLN 174 174 174 GLN GLN H . n A 1 175 SER 175 175 175 SER SER H . n A 1 176 ASP 176 176 176 ASP ASP H . n A 1 177 LEU 177 177 177 LEU LEU H . n A 1 178 TYR 178 178 178 TYR TYR H . n A 1 179 THR 179 179 179 THR THR H . n A 1 180 LEU 180 180 180 LEU LEU H . n A 1 181 SER 181 181 181 SER SER H . n A 1 182 SER 182 182 182 SER SER H . n A 1 183 SER 183 183 183 SER SER H . n A 1 184 VAL 184 184 184 VAL VAL H . n A 1 185 THR 185 185 185 THR THR H . n A 1 186 VAL 186 186 186 VAL VAL H . n A 1 187 PRO 187 187 187 PRO PRO H . n A 1 188 SER 188 188 188 SER SER H . n A 1 189 SER 189 189 189 SER SER H . n A 1 190 THR 190 190 190 THR THR H . n A 1 191 TRP 191 191 191 TRP TRP H . n A 1 192 PRO 192 192 192 PRO PRO H . n A 1 193 SER 193 193 193 SER SER H . n A 1 194 GLU 194 194 194 GLU GLU H . n A 1 195 THR 195 195 195 THR THR H . n A 1 196 VAL 196 196 196 VAL VAL H . n A 1 197 THR 197 197 197 THR THR H . n A 1 198 CYS 198 198 198 CYS CYS H . n A 1 199 ASN 199 199 199 ASN ASN H . n A 1 200 VAL 200 200 200 VAL VAL H . n A 1 201 ALA 201 201 201 ALA ALA H . n A 1 202 HIS 202 202 202 HIS HIS H . n A 1 203 PRO 203 203 203 PRO PRO H . n A 1 204 ALA 204 204 204 ALA ALA H . n A 1 205 SER 205 205 205 SER SER H . n A 1 206 SER 206 206 206 SER SER H . n A 1 207 THR 207 207 207 THR THR H . n A 1 208 LYS 208 208 208 LYS LYS H . n A 1 209 VAL 209 209 209 VAL VAL H . n A 1 210 ASP 210 210 210 ASP ASP H . n A 1 211 LYS 211 211 211 LYS LYS H . n A 1 212 LYS 212 212 212 LYS LYS H . n A 1 213 ILE 213 213 213 ILE ILE H . n A 1 214 VAL 214 214 214 VAL VAL H . n A 1 215 PRO 215 215 215 PRO PRO H . n A 1 216 ARG 216 216 216 ARG ARG H . n A 1 217 ASP 217 217 217 ASP ASP H . n B 2 1 PRO 1 7 7 PRO PRO L . n B 2 2 HIS 2 8 8 HIS HIS L . n B 2 3 SER 3 9 9 SER SER L . n B 2 4 ALA 4 10 10 ALA ALA L . n B 2 5 SER 5 11 11 SER SER L . n B 2 6 GLY 6 12 12 GLY GLY L . n B 2 7 PRO 7 13 13 PRO PRO L . n B 2 8 PRO 8 14 14 PRO PRO L . n B 2 9 ASP 9 15 15 ASP ASP L . n B 2 10 GLN 10 16 16 GLN GLN L . n B 2 11 THR 11 17 17 THR THR L . n B 2 12 VAL 12 18 18 VAL VAL L . n B 2 13 THR 13 19 19 THR THR L . n B 2 14 ILE 14 20 20 ILE ILE L . n B 2 15 SER 15 21 21 SER SER L . n B 2 16 CYS 16 22 22 CYS CYS L . n B 2 17 SER 17 23 23 SER SER L . n B 2 18 GLY 18 24 24 GLY GLY L . n B 2 19 SER 19 25 25 SER SER L . n B 2 20 SER 20 26 26 SER SER L . n B 2 21 SER 21 27 27 SER SER L . n B 2 22 ASN 22 28 28 ASN ASN L . n B 2 23 ILE 23 29 29 ILE ILE L . n B 2 24 GLU 24 30 30 GLU GLU L . n B 2 25 GLY 25 31 31 GLY GLY L . n B 2 26 ASN 26 32 32 ASN ASN L . n B 2 27 THR 27 33 33 THR THR L . n B 2 28 VAL 28 34 34 VAL VAL L . n B 2 29 ASN 29 35 35 ASN ASN L . n B 2 30 TRP 30 36 36 TRP TRP L . n B 2 31 TYR 31 37 37 TYR TYR L . n B 2 32 GLN 32 38 38 GLN GLN L . n B 2 33 GLN 33 39 39 GLN GLN L . n B 2 34 PHE 34 40 40 PHE PHE L . n B 2 35 PRO 35 41 41 PRO PRO L . n B 2 36 GLY 36 42 42 GLY GLY L . n B 2 37 LYS 37 43 43 LYS LYS L . n B 2 38 ALA 38 44 44 ALA ALA L . n B 2 39 PRO 39 45 45 PRO PRO L . n B 2 40 GLN 40 46 46 GLN GLN L . n B 2 41 LEU 41 47 47 LEU LEU L . n B 2 42 LEU 42 48 48 LEU LEU L . n B 2 43 ILE 43 49 49 ILE ILE L . n B 2 44 TYR 44 50 50 TYR TYR L . n B 2 45 GLY 45 51 51 GLY GLY L . n B 2 46 LYS 46 52 52 LYS LYS L . n B 2 47 ASP 47 53 53 ASP ASP L . n B 2 48 GLN 48 54 54 GLN GLN L . n B 2 49 ARG 49 55 55 ARG ARG L . n B 2 50 PRO 50 56 56 PRO PRO L . n B 2 51 SER 51 57 57 SER SER L . n B 2 52 GLY 52 58 58 GLY GLY L . n B 2 53 VAL 53 59 59 VAL VAL L . n B 2 54 PRO 54 60 60 PRO PRO L . n B 2 55 ASP 55 61 61 ASP ASP L . n B 2 56 ARG 56 62 62 ARG ARG L . n B 2 57 PHE 57 63 63 PHE PHE L . n B 2 58 SER 58 64 64 SER SER L . n B 2 59 ALA 59 65 65 ALA ALA L . n B 2 60 SER 60 66 66 SER SER L . n B 2 61 LYS 61 67 67 LYS LYS L . n B 2 62 SER 62 68 68 SER SER L . n B 2 63 GLY 63 69 69 GLY GLY L . n B 2 64 THR 64 70 70 THR THR L . n B 2 65 SER 65 71 71 SER SER L . n B 2 66 ALA 66 72 72 ALA ALA L . n B 2 67 SER 67 73 73 SER SER L . n B 2 68 LEU 68 74 74 LEU LEU L . n B 2 69 THR 69 75 75 THR THR L . n B 2 70 ILE 70 76 76 ILE ILE L . n B 2 71 SER 71 77 77 SER SER L . n B 2 72 GLY 72 78 78 GLY GLY L . n B 2 73 LEU 73 79 79 LEU LEU L . n B 2 74 GLN 74 80 80 GLN GLN L . n B 2 75 ALA 75 81 81 ALA ALA L . n B 2 76 GLU 76 82 82 GLU GLU L . n B 2 77 ASP 77 83 83 ASP ASP L . n B 2 78 GLU 78 84 84 GLU GLU L . n B 2 79 ALA 79 85 85 ALA ALA L . n B 2 80 ASP 80 86 86 ASP ASP L . n B 2 81 TYR 81 87 87 TYR TYR L . n B 2 82 TYR 82 88 88 TYR TYR L . n B 2 83 CYS 83 89 89 CYS CYS L . n B 2 84 ALA 84 90 90 ALA ALA L . n B 2 85 ALA 85 91 91 ALA ALA L . n B 2 86 TRP 86 92 92 TRP TRP L . n B 2 87 ASP 87 93 93 ASP ASP L . n B 2 88 ASP 88 94 94 ASP ASP L . n B 2 89 SER 89 95 95 SER SER L . n B 2 90 LEU 90 96 96 LEU LEU L . n B 2 91 ASN 91 97 97 ASN ASN L . n B 2 92 GLY 92 98 98 GLY GLY L . n B 2 93 TRP 93 99 99 TRP TRP L . n B 2 94 VAL 94 100 100 VAL VAL L . n B 2 95 PHE 95 101 101 PHE PHE L . n B 2 96 GLY 96 102 102 GLY GLY L . n B 2 97 GLY 97 103 103 GLY GLY L . n B 2 98 GLY 98 104 104 GLY GLY L . n B 2 99 THR 99 105 105 THR THR L . n B 2 100 LYS 100 106 106 LYS LYS L . n B 2 101 LEU 101 107 107 LEU LEU L . n B 2 102 THR 102 108 108 THR THR L . n B 2 103 VAL 103 109 109 VAL VAL L . n B 2 104 LEU 104 110 110 LEU LEU L . n B 2 105 GLY 105 111 111 GLY GLY L . n B 2 106 ALA 106 112 112 ALA ALA L . n B 2 107 PRO 107 113 113 PRO PRO L . n B 2 108 THR 108 114 114 THR THR L . n B 2 109 VAL 109 115 115 VAL VAL L . n B 2 110 SER 110 116 116 SER SER L . n B 2 111 ILE 111 117 117 ILE ILE L . n B 2 112 PHE 112 118 118 PHE PHE L . n B 2 113 PRO 113 119 119 PRO PRO L . n B 2 114 PRO 114 120 120 PRO PRO L . n B 2 115 SER 115 121 121 SER SER L . n B 2 116 SER 116 122 122 SER SER L . n B 2 117 GLU 117 123 123 GLU GLU L . n B 2 118 GLN 118 124 124 GLN GLN L . n B 2 119 LEU 119 125 125 LEU LEU L . n B 2 120 THR 120 126 126 THR THR L . n B 2 121 SER 121 127 127 SER SER L . n B 2 122 GLY 122 128 128 GLY GLY L . n B 2 123 GLY 123 129 129 GLY GLY L . n B 2 124 ALA 124 130 130 ALA ALA L . n B 2 125 SER 125 131 131 SER SER L . n B 2 126 VAL 126 132 132 VAL VAL L . n B 2 127 VAL 127 133 133 VAL VAL L . n B 2 128 CYS 128 134 134 CYS CYS L . n B 2 129 PHE 129 135 135 PHE PHE L . n B 2 130 LEU 130 136 136 LEU LEU L . n B 2 131 ASN 131 137 137 ASN ASN L . n B 2 132 ASN 132 138 138 ASN ASN L . n B 2 133 PHE 133 139 139 PHE PHE L . n B 2 134 TYR 134 140 140 TYR TYR L . n B 2 135 PRO 135 141 141 PRO PRO L . n B 2 136 LYS 136 142 142 LYS LYS L . n B 2 137 ASP 137 143 143 ASP ASP L . n B 2 138 ILE 138 144 144 ILE ILE L . n B 2 139 ASN 139 145 145 ASN ASN L . n B 2 140 VAL 140 146 146 VAL VAL L . n B 2 141 LYS 141 147 147 LYS LYS L . n B 2 142 TRP 142 148 148 TRP TRP L . n B 2 143 LYS 143 149 149 LYS LYS L . n B 2 144 ILE 144 150 150 ILE ILE L . n B 2 145 ASP 145 151 151 ASP ASP L . n B 2 146 GLY 146 152 152 GLY GLY L . n B 2 147 SER 147 153 153 SER SER L . n B 2 148 GLU 148 154 154 GLU GLU L . n B 2 149 ARG 149 155 155 ARG ARG L . n B 2 150 GLN 150 156 156 GLN GLN L . n B 2 151 ASN 151 157 157 ASN ASN L . n B 2 152 GLY 152 158 158 GLY GLY L . n B 2 153 VAL 153 159 159 VAL VAL L . n B 2 154 LEU 154 160 160 LEU LEU L . n B 2 155 ASN 155 161 161 ASN ASN L . n B 2 156 SER 156 162 162 SER SER L . n B 2 157 TRP 157 163 163 TRP TRP L . n B 2 158 THR 158 164 164 THR THR L . n B 2 159 ASP 159 165 165 ASP ASP L . n B 2 160 GLN 160 166 166 GLN GLN L . n B 2 161 ASP 161 167 167 ASP ASP L . n B 2 162 SER 162 168 168 SER SER L . n B 2 163 LYS 163 169 169 LYS LYS L . n B 2 164 ASP 164 170 170 ASP ASP L . n B 2 165 SER 165 171 171 SER SER L . n B 2 166 THR 166 172 172 THR THR L . n B 2 167 TYR 167 173 173 TYR TYR L . n B 2 168 SER 168 174 174 SER SER L . n B 2 169 MET 169 175 175 MET MET L . n B 2 170 SER 170 176 176 SER SER L . n B 2 171 SER 171 177 177 SER SER L . n B 2 172 THR 172 178 178 THR THR L . n B 2 173 LEU 173 179 179 LEU LEU L . n B 2 174 THR 174 180 180 THR THR L . n B 2 175 LEU 175 181 181 LEU LEU L . n B 2 176 THR 176 182 182 THR THR L . n B 2 177 LYS 177 183 183 LYS LYS L . n B 2 178 ASP 178 184 184 ASP ASP L . n B 2 179 GLU 179 185 185 GLU GLU L . n B 2 180 TYR 180 186 186 TYR TYR L . n B 2 181 GLU 181 187 187 GLU GLU L . n B 2 182 ARG 182 188 188 ARG ARG L . n B 2 183 HIS 183 189 189 HIS HIS L . n B 2 184 ASN 184 190 190 ASN ASN L . n B 2 185 SER 185 191 191 SER SER L . n B 2 186 TYR 186 192 192 TYR TYR L . n B 2 187 THR 187 193 193 THR THR L . n B 2 188 CYS 188 194 194 CYS CYS L . n B 2 189 GLU 189 195 195 GLU GLU L . n B 2 190 ALA 190 196 196 ALA ALA L . n B 2 191 THR 191 197 197 THR THR L . n B 2 192 HIS 192 198 198 HIS HIS L . n B 2 193 LYS 193 199 199 LYS LYS L . n B 2 194 THR 194 200 200 THR THR L . n B 2 195 SER 195 201 201 SER SER L . n B 2 196 THR 196 202 202 THR THR L . n B 2 197 SER 197 203 203 SER SER L . n B 2 198 PRO 198 204 204 PRO PRO L . n B 2 199 ILE 199 205 205 ILE ILE L . n B 2 200 VAL 200 206 206 VAL VAL L . n B 2 201 LYS 201 207 207 LYS LYS L . n B 2 202 SER 202 208 208 SER SER L . n B 2 203 PHE 203 209 209 PHE PHE L . n B 2 204 ASN 204 210 210 ASN ASN L . n B 2 205 ARG 205 211 211 ARG ARG L . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-10-15 2 'Structure model' 1 1 2017-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category em_software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_em_software.image_processing_id' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 4UOM _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'REFINEMENT PROTOCOL--HOMOLOGY' _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 4UOM _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 1389 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method 'COMMON LINES' _em_3d_reconstruction.nominal_pixel_size 1.07 _em_3d_reconstruction.actual_pixel_size 1.11 _em_3d_reconstruction.resolution 17 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details 'SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2645. (DEPOSITION ID: 12481).' _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name '0.5 M NACL, 20 MM TRIS PH 7.6, 5 MM EDTA' _em_buffer.pH 7.6 _em_buffer.details '0.5 M NACL, 20 MM TRIS PH 7.6, 5 MM EDTA' # _em_entity_assembly.id 1 _em_entity_assembly.name 'VENEZUELAN EQUINE ENCEPHALITIS VIRUS STRAIN TC-83 COMPLEXED TO FAB F5' _em_entity_assembly.type VIRUS _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 4UOM _em_image_scans.id 1 _em_image_scans.image_recording_id 1 _em_image_scans.number_digital_images 112 _em_image_scans.citation_id ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.details ? # _em_imaging.entry_id 4UOM _em_imaging.id 1 _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_id 1 _em_imaging.date 2012-07-14 _em_imaging.temperature 100 _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 3000 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 2.7 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.nominal_magnification 59000 _em_imaging.calibrated_magnification 60521 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 300 _em_imaging.details ? _em_imaging.specimen_holder_type . _em_imaging.specimen_holder_model . _em_imaging.citation_id ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'HOLEY CARBON' _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? # _em_vitrification.entry_id 4UOM _em_vitrification.id 1 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.cryogen_name ETHANE _em_vitrification.specimen_id 1 _em_vitrification.details 'LIQUID ETHANE' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 4UOM _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 4UOM _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry I _em_single_particle_entity.image_processing_id 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE2 H TRP 47 ? ? CH2 L TRP 99 ? ? 0.27 2 1 CD2 H TRP 47 ? ? CZ2 L TRP 99 ? ? 0.81 3 1 NH2 H ARG 50 ? ? CB L ASP 93 ? ? 0.84 4 1 CG H TRP 47 ? ? CE2 L TRP 99 ? ? 0.85 5 1 CA L THR 114 ? ? O L PHE 135 ? ? 0.94 6 1 CB H TRP 47 ? ? NE1 L TRP 99 ? ? 1.00 7 1 CG H TRP 47 ? ? CZ2 L TRP 99 ? ? 1.03 8 1 O H THR 101 ? ? CZ3 L TRP 92 ? ? 1.06 9 1 NH1 H ARG 50 ? ? OD1 L ASP 93 ? ? 1.16 10 1 CZ2 H TRP 47 ? ? CH2 L TRP 99 ? ? 1.19 11 1 O H THR 101 ? ? CE3 L TRP 92 ? ? 1.20 12 1 CE2 H TRP 47 ? ? CZ2 L TRP 99 ? ? 1.21 13 1 CD2 H TRP 47 ? ? CH2 L TRP 99 ? ? 1.43 14 1 CD1 H TRP 47 ? ? CZ2 L TRP 99 ? ? 1.43 15 1 CZ H PHE 102 ? ? CD2 L LEU 47 ? ? 1.44 16 1 CZ H ARG 50 ? ? CG L ASP 93 ? ? 1.45 17 1 CD2 H TRP 47 ? ? CE2 L TRP 99 ? ? 1.50 18 1 NH1 H ARG 50 ? ? CG L ASP 93 ? ? 1.51 19 1 CG H TRP 47 ? ? NE1 L TRP 99 ? ? 1.51 20 1 NE1 H TRP 47 ? ? CZ2 L TRP 99 ? ? 1.51 21 1 NE1 H TRP 47 ? ? CH2 L TRP 99 ? ? 1.56 22 1 NH2 H ARG 50 ? ? CG L ASP 93 ? ? 1.58 23 1 CZ2 H TRP 47 ? ? CZ3 L TRP 99 ? ? 1.59 24 1 CE2 H TRP 47 ? ? CZ3 L TRP 99 ? ? 1.60 25 1 CE1 H PHE 102 ? ? CD1 L LEU 47 ? ? 1.65 26 1 C L THR 114 ? ? O L PHE 135 ? ? 1.68 27 1 CD1 H TRP 47 ? ? CE2 L TRP 99 ? ? 1.69 28 1 CE1 H PHE 102 ? ? CD2 L LEU 47 ? ? 1.70 29 1 CD1 H PHE 102 ? ? CD1 L LEU 47 ? ? 1.70 30 1 C H THR 101 ? ? CZ3 L TRP 92 ? ? 1.72 31 1 C L LEU 110 ? ? CA L GLY 111 ? ? 1.73 32 1 C L GLY 111 ? ? CE2 L TRP 163 ? ? 1.78 33 1 CB H TRP 47 ? ? CE2 L TRP 99 ? ? 1.78 34 1 O L LYS 106 ? ? N L LEU 107 ? ? 1.80 35 1 O L PHE 135 ? ? N L LEU 136 ? ? 1.80 36 1 C L GLY 111 ? ? CD2 L TRP 163 ? ? 1.80 37 1 CZ H ARG 50 ? ? CB L ASP 93 ? ? 1.83 38 1 N L THR 114 ? ? O L PHE 135 ? ? 1.84 39 1 CA L GLY 111 ? ? CE2 L TRP 163 ? ? 1.91 40 1 CZ H ARG 50 ? ? OD2 L ASP 93 ? ? 1.95 41 1 CA L GLY 111 ? ? CD2 L TRP 163 ? ? 1.96 42 1 CE1 H PHE 102 ? ? CG L LEU 47 ? ? 1.99 43 1 C L GLY 111 ? ? NE1 L TRP 163 ? ? 2.03 44 1 OG1 L THR 114 ? ? N L PHE 135 ? ? 2.04 45 1 OG1 L THR 114 ? ? C L CYS 134 ? ? 2.05 46 1 C L THR 114 ? ? N L PHE 135 ? ? 2.06 47 1 O L SER 9 ? ? O L LYS 106 ? ? 2.07 48 1 CE H MET 37 ? ? CZ L PHE 101 ? ? 2.08 49 1 CZ H ARG 50 ? ? OD1 L ASP 93 ? ? 2.08 50 1 NH2 H ARG 50 ? ? CE3 L TRP 99 ? ? 2.09 51 1 C L GLY 111 ? ? CG L TRP 163 ? ? 2.10 52 1 CA L THR 114 ? ? C L PHE 135 ? ? 2.10 53 1 O L PRO 113 ? ? O L MET 175 ? ? 2.11 54 1 O L LEU 110 ? ? NZ L LYS 142 ? ? 2.14 55 1 CB H TRP 47 ? ? CD1 L TRP 99 ? ? 2.14 56 1 NH2 H ARG 50 ? ? OD2 L ASP 93 ? ? 2.15 57 1 N L ALA 112 ? ? CE2 L TRP 163 ? ? 2.15 58 1 O L GLY 111 ? ? CD1 L TRP 163 ? ? 2.15 59 1 CH2 H TRP 47 ? ? CH2 L TRP 99 ? ? 2.18 60 1 O H PRO 170 ? ? OG L SER 162 ? ? 2.19 61 1 O L LEU 110 ? ? CG L TRP 163 ? ? 2.19 62 1 CE3 H TRP 47 ? ? CZ2 L TRP 99 ? ? 2.19 63 1 C L GLY 111 ? ? CD1 L TRP 163 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C H ASN 57 ? ? O H ASN 57 ? ? 0.957 1.229 -0.272 0.019 N 2 1 CD L PRO 56 ? ? N L PRO 56 ? ? 1.334 1.474 -0.140 0.014 N 3 1 CG L LYS 67 ? ? CD L LYS 67 ? ? 1.265 1.520 -0.255 0.034 N 4 1 N L LYS 106 ? ? CA L LYS 106 ? ? 1.102 1.459 -0.357 0.020 N 5 1 CB L LYS 106 ? ? CG L LYS 106 ? ? 1.079 1.521 -0.442 0.027 N 6 1 CG L LYS 106 ? ? CD L LYS 106 ? ? 1.148 1.520 -0.372 0.034 N 7 1 CE L LYS 106 ? ? NZ L LYS 106 ? ? 1.159 1.486 -0.327 0.025 N 8 1 CA L LYS 106 ? ? C L LYS 106 ? ? 1.725 1.525 0.200 0.026 N 9 1 C L LYS 106 ? ? O L LYS 106 ? ? 0.981 1.229 -0.248 0.019 N 10 1 C L LEU 110 ? ? O L LEU 110 ? ? 1.101 1.229 -0.128 0.019 N 11 1 N L GLY 111 ? ? CA L GLY 111 ? ? 0.863 1.456 -0.593 0.015 N 12 1 CA L GLY 111 ? ? C L GLY 111 ? ? 2.742 1.514 1.228 0.016 N 13 1 C L GLY 111 ? ? O L GLY 111 ? ? 0.826 1.232 -0.406 0.016 N 14 1 N L ALA 112 ? ? CA L ALA 112 ? ? 1.075 1.459 -0.384 0.020 N 15 1 CA L ALA 112 ? ? CB L ALA 112 ? ? 0.908 1.520 -0.612 0.021 N 16 1 CA L ALA 112 ? ? C L ALA 112 ? ? 1.812 1.525 0.287 0.026 N 17 1 C L ALA 112 ? ? O L ALA 112 ? ? 0.935 1.229 -0.294 0.019 N 18 1 N L PRO 113 ? ? CA L PRO 113 ? ? 1.210 1.468 -0.258 0.017 N 19 1 CG L PRO 113 ? ? CD L PRO 113 ? ? 0.472 1.502 -1.030 0.033 N 20 1 CD L PRO 113 ? ? N L PRO 113 ? ? 1.877 1.474 0.403 0.014 N 21 1 N L THR 114 ? ? CA L THR 114 ? ? 0.970 1.459 -0.489 0.020 N 22 1 CA L THR 114 ? ? CB L THR 114 ? ? 2.077 1.529 0.548 0.026 N 23 1 CB L THR 114 ? ? OG1 L THR 114 ? ? 1.756 1.428 0.328 0.020 N 24 1 CB L THR 114 ? ? CG2 L THR 114 ? ? 0.789 1.519 -0.730 0.033 N 25 1 CA L THR 114 ? ? C L THR 114 ? ? 2.003 1.525 0.478 0.026 N 26 1 C L THR 114 ? ? O L THR 114 ? ? 0.936 1.229 -0.293 0.019 N 27 1 CA L CYS 134 ? ? CB L CYS 134 ? ? 1.196 1.526 -0.330 0.013 N 28 1 C L CYS 134 ? ? O L CYS 134 ? ? 1.445 1.229 0.216 0.019 N 29 1 N L PHE 135 ? ? CA L PHE 135 ? ? 1.867 1.459 0.408 0.020 N 30 1 CA L PHE 135 ? ? CB L PHE 135 ? ? 1.265 1.535 -0.270 0.022 N 31 1 C L PHE 135 ? ? N L LEU 136 ? ? 1.178 1.336 -0.158 0.023 Y 32 1 CG L LEU 136 ? ? CD1 L LEU 136 ? ? 1.154 1.514 -0.360 0.037 N 33 1 CB L TRP 163 ? ? CG L TRP 163 ? ? 1.386 1.498 -0.112 0.018 N 34 1 CG L TRP 163 ? ? CD2 L TRP 163 ? ? 1.745 1.432 0.313 0.017 N 35 1 CG L TRP 163 ? ? CD1 L TRP 163 ? ? 1.637 1.363 0.274 0.014 N 36 1 CD1 L TRP 163 ? ? NE1 L TRP 163 ? ? 1.627 1.375 0.252 0.017 N 37 1 NE1 L TRP 163 ? ? CE2 L TRP 163 ? ? 1.657 1.371 0.286 0.013 N 38 1 CE2 L TRP 163 ? ? CZ2 L TRP 163 ? ? 1.276 1.393 -0.117 0.017 N 39 1 CE2 L TRP 163 ? ? CD2 L TRP 163 ? ? 2.280 1.409 0.871 0.012 N 40 1 CD2 L TRP 163 ? ? CE3 L TRP 163 ? ? 1.200 1.399 -0.199 0.015 N 41 1 CA L MET 175 ? ? CB L MET 175 ? ? 1.319 1.535 -0.216 0.022 N 42 1 CB L MET 175 ? ? CG L MET 175 ? ? 0.876 1.509 -0.633 0.032 N 43 1 CG L MET 175 ? ? SD L MET 175 ? ? 2.565 1.807 0.758 0.026 N 44 1 SD L MET 175 ? ? CE L MET 175 ? ? 2.122 1.774 0.348 0.056 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA H THR 58 ? ? CB H THR 58 ? ? CG2 H THR 58 ? ? 121.37 112.40 8.97 1.40 N 2 1 CA H THR 101 ? ? CB H THR 101 ? ? CG2 H THR 101 ? ? 127.12 112.40 14.72 1.40 N 3 1 CB H PHE 102 ? ? CG H PHE 102 ? ? CD1 H PHE 102 ? ? 113.42 120.80 -7.38 0.70 N 4 1 CB L HIS 8 ? ? CA L HIS 8 ? ? C L HIS 8 ? ? 88.79 110.40 -21.61 2.00 N 5 1 CA L HIS 8 ? ? C L HIS 8 ? ? O L HIS 8 ? ? 105.22 120.10 -14.88 2.10 N 6 1 O L HIS 8 ? ? C L HIS 8 ? ? N L SER 9 ? ? 134.20 122.70 11.50 1.60 Y 7 1 C L HIS 8 ? ? N L SER 9 ? ? CA L SER 9 ? ? 140.20 121.70 18.50 2.50 Y 8 1 N L SER 9 ? ? CA L SER 9 ? ? C L SER 9 ? ? 151.13 111.00 40.13 2.70 N 9 1 CA L SER 9 ? ? C L SER 9 ? ? O L SER 9 ? ? 106.52 120.10 -13.58 2.10 N 10 1 CB L ALA 10 ? ? CA L ALA 10 ? ? C L ALA 10 ? ? 99.88 110.10 -10.22 1.50 N 11 1 N L ALA 10 ? ? CA L ALA 10 ? ? CB L ALA 10 ? ? 129.45 110.10 19.35 1.40 N 12 1 N L ALA 10 ? ? CA L ALA 10 ? ? C L ALA 10 ? ? 127.37 111.00 16.37 2.70 N 13 1 CB L ASN 32 ? ? CA L ASN 32 ? ? C L ASN 32 ? ? 122.56 110.40 12.16 2.00 N 14 1 CB L ASN 32 ? ? CG L ASN 32 ? ? OD1 L ASN 32 ? ? 108.14 121.60 -13.46 2.00 N 15 1 OG1 L THR 33 ? ? CB L THR 33 ? ? CG2 L THR 33 ? ? 124.37 110.00 14.37 2.30 N 16 1 C L ARG 55 ? ? N L PRO 56 ? ? CA L PRO 56 ? ? 129.12 119.30 9.82 1.50 Y 17 1 C L ARG 55 ? ? N L PRO 56 ? ? CD L PRO 56 ? ? 115.47 128.40 -12.93 2.10 Y 18 1 N L PRO 56 ? ? CD L PRO 56 ? ? CG L PRO 56 ? ? 113.32 103.20 10.12 1.50 N 19 1 CG L LYS 67 ? ? CD L LYS 67 ? ? CE L LYS 67 ? ? 148.21 111.90 36.31 3.00 N 20 1 CD L LYS 67 ? ? CE L LYS 67 ? ? NZ L LYS 67 ? ? 125.76 111.70 14.06 2.30 N 21 1 N L ALA 72 ? ? CA L ALA 72 ? ? CB L ALA 72 ? ? 100.08 110.10 -10.02 1.40 N 22 1 N L LYS 106 ? ? CA L LYS 106 ? ? CB L LYS 106 ? ? 122.79 110.60 12.19 1.80 N 23 1 CA L LYS 106 ? ? CB L LYS 106 ? ? CG L LYS 106 ? ? 129.44 113.40 16.04 2.20 N 24 1 O L LYS 106 ? ? C L LYS 106 ? ? N L LEU 107 ? ? 100.78 122.70 -21.92 1.60 Y 25 1 N L GLY 111 ? ? CA L GLY 111 ? ? C L GLY 111 ? ? 143.44 113.10 30.34 2.50 N 26 1 CA L GLY 111 ? ? C L GLY 111 ? ? O L GLY 111 ? ? 141.89 120.60 21.29 1.80 N 27 1 O L GLY 111 ? ? C L GLY 111 ? ? N L ALA 112 ? ? 110.33 122.70 -12.37 1.60 Y 28 1 CB L ALA 112 ? ? CA L ALA 112 ? ? C L ALA 112 ? ? 97.94 110.10 -12.16 1.50 N 29 1 N L ALA 112 ? ? CA L ALA 112 ? ? CB L ALA 112 ? ? 132.73 110.10 22.63 1.40 N 30 1 CA L ALA 112 ? ? C L ALA 112 ? ? O L ALA 112 ? ? 87.38 120.10 -32.72 2.10 N 31 1 CA L PRO 113 ? ? N L PRO 113 ? ? CD L PRO 113 ? ? 88.05 111.50 -23.45 1.40 N 32 1 N L PRO 113 ? ? CA L PRO 113 ? ? CB L PRO 113 ? ? 79.83 102.60 -22.77 1.10 N 33 1 CB L PRO 113 ? ? CG L PRO 113 ? ? CD L PRO 113 ? ? 79.42 105.40 -25.98 2.30 N 34 1 N L PRO 113 ? ? CD L PRO 113 ? ? CG L PRO 113 ? ? 144.24 103.80 40.44 1.20 N 35 1 CA L THR 114 ? ? C L THR 114 ? ? N L VAL 115 ? ? 131.34 117.20 14.14 2.20 Y 36 1 O L THR 114 ? ? C L THR 114 ? ? N L VAL 115 ? ? 110.68 122.70 -12.02 1.60 Y 37 1 C L THR 114 ? ? N L VAL 115 ? ? CA L VAL 115 ? ? 143.58 121.70 21.88 2.50 Y 38 1 N L VAL 115 ? ? CA L VAL 115 ? ? CB L VAL 115 ? ? 97.47 111.50 -14.03 2.20 N 39 1 CG1 L VAL 115 ? ? CB L VAL 115 ? ? CG2 L VAL 115 ? ? 100.60 110.90 -10.30 1.60 N 40 1 N L VAL 115 ? ? CA L VAL 115 ? ? C L VAL 115 ? ? 127.79 111.00 16.79 2.70 N 41 1 CB L CYS 134 ? ? CA L CYS 134 ? ? C L CYS 134 ? ? 87.47 110.40 -22.93 2.00 N 42 1 N L CYS 134 ? ? CA L CYS 134 ? ? CB L CYS 134 ? ? 133.22 110.80 22.42 1.50 N 43 1 CA L CYS 134 ? ? CB L CYS 134 ? ? SG L CYS 134 ? ? 122.00 114.20 7.80 1.10 N 44 1 CA L CYS 134 ? ? C L CYS 134 ? ? O L CYS 134 ? ? 101.58 120.10 -18.52 2.10 N 45 1 CB L PHE 135 ? ? CA L PHE 135 ? ? C L PHE 135 ? ? 133.78 110.40 23.38 2.00 N 46 1 N L PHE 135 ? ? CA L PHE 135 ? ? CB L PHE 135 ? ? 123.37 110.60 12.77 1.80 N 47 1 CA L PHE 135 ? ? CB L PHE 135 ? ? CG L PHE 135 ? ? 132.12 113.90 18.22 2.40 N 48 1 CB L PHE 135 ? ? CG L PHE 135 ? ? CD1 L PHE 135 ? ? 125.17 120.80 4.37 0.70 N 49 1 CA L PHE 135 ? ? C L PHE 135 ? ? O L PHE 135 ? ? 76.78 120.10 -43.32 2.10 N 50 1 CA L PHE 135 ? ? C L PHE 135 ? ? N L LEU 136 ? ? 162.97 117.20 45.77 2.20 Y 51 1 O L PHE 135 ? ? C L PHE 135 ? ? N L LEU 136 ? ? 96.92 122.70 -25.78 1.60 Y 52 1 C L PHE 135 ? ? N L LEU 136 ? ? CA L LEU 136 ? ? 138.11 121.70 16.41 2.50 Y 53 1 CB L LEU 136 ? ? CG L LEU 136 ? ? CD1 L LEU 136 ? ? 127.62 111.00 16.62 1.70 N 54 1 CA L TRP 163 ? ? CB L TRP 163 ? ? CG L TRP 163 ? ? 130.01 113.70 16.31 1.90 N 55 1 CD1 L TRP 163 ? ? NE1 L TRP 163 ? ? CE2 L TRP 163 ? ? 120.89 109.00 11.89 0.90 N 56 1 NE1 L TRP 163 ? ? CE2 L TRP 163 ? ? CZ2 L TRP 163 ? ? 158.75 130.40 28.35 1.10 N 57 1 CD2 L TRP 163 ? ? CE2 L TRP 163 ? ? CZ2 L TRP 163 ? ? 102.94 122.30 -19.36 1.20 N 58 1 NE1 L TRP 163 ? ? CE2 L TRP 163 ? ? CD2 L TRP 163 ? ? 92.27 107.30 -15.03 1.00 N 59 1 CE2 L TRP 163 ? ? CD2 L TRP 163 ? ? CG L TRP 163 ? ? 102.43 107.30 -4.87 0.80 N 60 1 CZ3 L TRP 163 ? ? CH2 L TRP 163 ? ? CZ2 L TRP 163 ? ? 130.54 121.60 8.94 1.20 N 61 1 CB L MET 175 ? ? CA L MET 175 ? ? C L MET 175 ? ? 124.73 110.40 14.33 2.00 N 62 1 N L MET 175 ? ? CA L MET 175 ? ? CB L MET 175 ? ? 96.17 110.60 -14.43 1.80 N 63 1 CB L MET 175 ? ? CG L MET 175 ? ? SD L MET 175 ? ? 157.13 112.40 44.73 3.00 N 64 1 CG L MET 175 ? ? SD L MET 175 ? ? CE L MET 175 ? ? 126.90 100.20 26.70 1.60 N 65 1 O L MET 175 ? ? C L MET 175 ? ? N L SER 176 ? ? 112.98 122.70 -9.72 1.60 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU H 10 ? ? 138.93 -164.36 2 1 PRO H 53 ? ? -69.29 65.51 3 1 ASN H 57 ? ? -160.85 -4.80 4 1 ALA H 92 ? ? 173.67 172.75 5 1 ARG H 98 ? ? -117.21 75.03 6 1 THR H 101 ? ? -132.33 -35.69 7 1 PHE H 102 ? ? 112.87 104.33 8 1 ASN H 136 ? ? 53.99 -150.15 9 1 SER H 137 ? ? 18.54 -91.58 10 1 SER H 206 ? ? 58.75 17.70 11 1 SER L 9 ? ? -97.64 -75.33 12 1 ALA L 10 ? ? 67.52 71.91 13 1 ASP L 15 ? ? 102.36 -25.48 14 1 ASN L 32 ? ? -73.68 -101.69 15 1 THR L 33 ? ? -158.18 75.21 16 1 LYS L 52 ? ? 77.79 -53.93 17 1 LYS L 67 ? ? 122.13 176.97 18 1 ALA L 85 ? ? 147.85 -154.22 19 1 ALA L 91 ? ? -110.98 -166.55 20 1 SER L 95 ? ? -92.48 -87.15 21 1 THR L 105 ? ? -54.19 106.11 22 1 LYS L 106 ? ? -1.95 54.05 23 1 VAL L 109 ? ? -162.84 -157.12 24 1 SER L 116 ? ? 154.95 132.00 25 1 SER L 162 ? ? -161.13 118.11 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 GLY L 111 ? ? ALA L 112 ? ? -145.19 2 1 THR L 114 ? ? VAL L 115 ? ? 149.14 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 PRO H 9 ? ? -11.54 2 1 HIS L 8 ? ? -12.07 3 1 LYS L 106 ? ? -12.65 4 1 PRO L 113 ? ? -20.01 5 1 VAL L 115 ? ? -12.65 6 1 PHE L 135 ? ? 102.87 7 1 MET L 175 ? ? 12.45 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id TYR _pdbx_validate_planes.auth_asym_id H _pdbx_validate_planes.auth_seq_id 33 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.090 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 CA ? L SER 9 ? PLANAR . 2 1 CA ? L ALA 112 ? PLANAR . 3 1 CA ? L PHE 135 ? PLANAR . # loop_ _pdbx_validate_polymer_linkage.id _pdbx_validate_polymer_linkage.PDB_model_num _pdbx_validate_polymer_linkage.auth_atom_id_1 _pdbx_validate_polymer_linkage.auth_asym_id_1 _pdbx_validate_polymer_linkage.auth_comp_id_1 _pdbx_validate_polymer_linkage.auth_seq_id_1 _pdbx_validate_polymer_linkage.PDB_ins_code_1 _pdbx_validate_polymer_linkage.label_alt_id_1 _pdbx_validate_polymer_linkage.auth_atom_id_2 _pdbx_validate_polymer_linkage.auth_asym_id_2 _pdbx_validate_polymer_linkage.auth_comp_id_2 _pdbx_validate_polymer_linkage.auth_seq_id_2 _pdbx_validate_polymer_linkage.PDB_ins_code_2 _pdbx_validate_polymer_linkage.label_alt_id_2 _pdbx_validate_polymer_linkage.dist 1 1 C L ALA 112 ? ? N L PRO 113 ? ? 1.66 2 1 C L CYS 134 ? ? N L PHE 135 ? ? 1.99 3 1 C L PHE 135 ? ? N L LEU 136 ? ? 1.18 # _em_ctf_correction.id 1 _em_ctf_correction.details 'EACH IMAGE' _em_ctf_correction.type ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.avg_electron_dose_per_image 24 _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id _em_software.imaging_id _em_software.fitting_id 1 EMAN 1 RECONSTRUCTION ? 1 ? ? 2 EMAN 2 RECONSTRUCTION ? 1 ? ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 1.5 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? #