HEADER TRANSLATION 25-JUN-14 4UQT TITLE RRM-PEPTIDE STRUCTURE IN RES COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: U2 SNRNP COMPONENT IST3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM, RESIDUES 25-113; COMPND 5 SYNONYM: INCREASED SODIUM TOLERANCE PROTEIN 3, U2 SNRNP PROTEIN COMPND 6 SNU17, SNU17P; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PRE-MRNA-SPLICING FACTOR CWC26; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: TRP-CONTAINING LIGAND, RESIDUES 222-256; COMPND 12 SYNONYM: BUD SITE SELECTION PROTEIN 13, COMPLEXED WITH CEF1 PROTEIN COMPND 13 26, SYNTHETIC LETHAL WITH CLF1 PROTEIN 7, BUD13P; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS 24D; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 10 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 11 ORGANISM_TAXID: 4932; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: PLYSS 24D KEYWDS TRANSLATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.TRIPSIANES,A.FRIBERG,C.BARRANDON,B.SERAPHIN,M.SATTLER REVDAT 4 14-JUN-23 4UQT 1 REMARK REVDAT 3 22-OCT-14 4UQT 1 JRNL REVDAT 2 10-SEP-14 4UQT 1 JRNL REMARK ATOM MASTER REVDAT 1 03-SEP-14 4UQT 0 JRNL AUTH K.TRIPSIANES,A.FRIBERG,C.BARRANDON,M.BROOKS,H.VAN TILBEURGH, JRNL AUTH 2 B.SERAPHIN,M.SATTLER JRNL TITL A NOVEL PROTEIN-PROTEIN INTERACTION IN THE RES (RETENTION JRNL TITL 2 AND SPLICING) COMPLEX. JRNL REF J.BIOL.CHEM. V. 289 28640 2014 JRNL REFN ISSN 0021-9258 JRNL PMID 25160624 JRNL DOI 10.1074/JBC.M114.592311 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- KUNSTLEVE, REMARK 3 JIANG,KUSZEWSKI,NILGES,PANNU,READ, RICE,SIMONSON, REMARK 3 WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN THE REMARK 3 JRNL CITATION ABOVE. REMARK 4 REMARK 4 4UQT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1290061004. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 25 REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : 93% WATER/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 15N-EDITED 3D NOESY; 13C- EDITED REMARK 210 3D NOESY (ALIPHATICS); 13C- REMARK 210 EDITED 3D NOESY (AROMATICS); 13C- REMARK 210 EDITED 3D NOESY (ALIPHATICSS) REMARK 210 F1 15N/13C FILTERED REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS 2.1, CYANA, CNS, REMARK 210 TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON STOICHIOMETRIC COMPLEX SAMPLES WHERE ONLY SNU17P REMARK 210 OR BUD13P WAS 13C, 15N-LABELED REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 21 REMARK 465 ALA A 22 REMARK 465 MET A 23 REMARK 465 GLY A 24 REMARK 465 GLY B 218 REMARK 465 ALA B 219 REMARK 465 MET B 220 REMARK 465 GLY B 221 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 26 HH22 ARG A 83 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 37 40.58 72.18 REMARK 500 1 ARG B 223 51.49 70.69 REMARK 500 2 ASN A 37 70.12 68.35 REMARK 500 2 ARG B 223 24.88 80.08 REMARK 500 3 ASN A 37 34.16 72.67 REMARK 500 3 ASN B 239 88.41 -61.78 REMARK 500 3 LYS B 255 -74.78 -62.23 REMARK 500 4 GLU A 26 16.51 -146.46 REMARK 500 4 LYS A 28 -69.97 -96.19 REMARK 500 4 ASN A 37 36.93 71.38 REMARK 500 5 ASN A 37 38.35 70.02 REMARK 500 5 GLU A 70 -89.77 -91.33 REMARK 500 6 ASN A 30 24.79 -77.90 REMARK 500 6 GLU A 70 -76.70 -106.95 REMARK 500 7 ASN A 30 30.37 -75.50 REMARK 500 8 ASN A 30 30.86 -83.15 REMARK 500 8 ASN A 37 30.32 75.70 REMARK 500 8 ARG B 223 51.94 73.67 REMARK 500 9 ASP A 29 -12.52 65.89 REMARK 500 9 ASN A 30 29.83 -79.77 REMARK 500 9 ALA B 225 68.45 -110.62 REMARK 500 9 GLU B 254 172.75 -59.49 REMARK 500 10 LYS A 28 -63.65 -122.18 REMARK 500 10 ASN A 30 31.17 -80.73 REMARK 500 11 LYS A 28 -57.51 -139.71 REMARK 500 11 ARG B 223 52.12 75.20 REMARK 500 12 ASN A 37 41.27 70.39 REMARK 500 13 ASN A 30 30.24 -75.21 REMARK 500 13 ASN A 37 32.84 71.74 REMARK 500 13 GLU A 70 -84.31 -107.63 REMARK 500 15 ASN A 37 39.90 70.94 REMARK 500 15 ILE B 252 -32.01 -130.67 REMARK 500 16 ASN A 37 35.16 71.13 REMARK 500 16 GLU A 70 -78.76 -111.41 REMARK 500 17 ASN A 37 45.00 71.46 REMARK 500 17 LYS B 255 103.00 -56.31 REMARK 500 18 ASN A 30 30.54 -81.06 REMARK 500 19 ASN A 37 38.68 73.73 REMARK 500 19 GLU A 70 -74.49 -90.74 REMARK 500 19 ARG B 223 8.95 86.53 REMARK 500 19 GLU B 254 -169.92 -75.03 REMARK 500 20 GLU A 70 -70.29 -106.03 REMARK 500 20 ASN B 239 104.33 -27.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG B 237 0.07 SIDE CHAIN REMARK 500 6 ARG A 110 0.07 SIDE CHAIN REMARK 500 19 ARG B 237 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25047 RELATED DB: BMRB REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST FOUR RESIDUES OF THE PROTEIN SEQUENCE (GAMG) ARE REMARK 999 COMING FROM THE TAG. DBREF 4UQT A 25 113 UNP P40565 IST3_YEAST 25 113 DBREF 4UQT B 222 256 UNP P46947 CWC26_YEAST 222 256 SEQADV 4UQT GLY A 21 UNP P40565 EXPRESSION TAG SEQADV 4UQT ALA A 22 UNP P40565 EXPRESSION TAG SEQADV 4UQT MET A 23 UNP P40565 EXPRESSION TAG SEQADV 4UQT GLY A 24 UNP P40565 EXPRESSION TAG SEQADV 4UQT GLY B 218 UNP P46947 EXPRESSION TAG SEQADV 4UQT ALA B 219 UNP P46947 EXPRESSION TAG SEQADV 4UQT MET B 220 UNP P46947 EXPRESSION TAG SEQADV 4UQT GLY B 221 UNP P46947 EXPRESSION TAG SEQRES 1 A 93 GLY ALA MET GLY ASN GLU TYR LYS ASP ASN ALA TYR ILE SEQRES 2 A 93 TYR ILE GLY ASN LEU ASN ARG GLU LEU THR GLU GLY ASP SEQRES 3 A 93 ILE LEU THR VAL PHE SER GLU TYR GLY VAL PRO VAL ASP SEQRES 4 A 93 VAL ILE LEU SER ARG ASP GLU ASN THR GLY GLU SER GLN SEQRES 5 A 93 GLY PHE ALA TYR LEU LYS TYR GLU ASP GLN ARG SER THR SEQRES 6 A 93 ILE LEU ALA VAL ASP ASN LEU ASN GLY PHE LYS ILE GLY SEQRES 7 A 93 GLY ARG ALA LEU LYS ILE ASP HIS THR PHE TYR ARG PRO SEQRES 8 A 93 LYS ARG SEQRES 1 B 39 GLY ALA MET GLY ASN ARG PHE ALA ILE MET PRO GLY SER SEQRES 2 B 39 ARG TRP ASP GLY VAL HIS ARG SER ASN GLY PHE GLU GLU SEQRES 3 B 39 LYS TRP PHE ALA LYS GLN ASN GLU ILE ASN GLU LYS LYS HELIX 1 1 THR A 43 GLU A 53 1 11 HELIX 2 2 ASP A 81 ASN A 93 1 13 HELIX 3 3 GLY B 240 GLN B 249 1 10 SHEET 1 AA 4 PRO A 57 ARG A 64 0 SHEET 2 AA 4 SER A 71 TYR A 79 -1 N GLN A 72 O SER A 63 SHEET 3 AA 4 TYR A 32 GLY A 36 -1 O ILE A 33 N LEU A 77 SHEET 4 AA 4 LYS A 103 HIS A 106 -1 O LYS A 103 N GLY A 36 SHEET 1 AB 2 LYS A 96 ILE A 97 0 SHEET 2 AB 2 ARG A 100 ALA A 101 -1 O ARG A 100 N ILE A 97 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1