HEADER CELL ADHESION 03-JUL-14 4US7 TITLE SULFUR SAD PHASED STRUCTURE OF A TYPE IV PILUS PROTEIN FROM TITLE 2 SHEWANELLA ONEIDENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PILD PROCESSED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 36-123; COMPND 5 SYNONYM: TYPE IV PILUS PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: CYSTEINE BRIDGE BETWEEN CYS69 AND CYS86 IN CHAIN A COMPND 8 CYSTEINE BRIDGE BETWEEN CYS69 AND CYS86 IN CHAIN B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA ONEIDENSIS; SOURCE 3 ORGANISM_TAXID: 211586; SOURCE 4 STRAIN: MR-1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ORIGAMI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CELL ADHESION, TYPE IV PILIN, SULFUR SAD, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.GORGEL,A.BOEGGILD,J.J.ULSTRUP,U.MUELLER,M.WEISS,P.NISSEN,T.BOESEN REVDAT 1 29-APR-15 4US7 0 JRNL AUTH M.GORGEL,J.J.ULSTRUP,A.BOGGILD,N.C.JONES,S.V.HOFFMANN, JRNL AUTH 2 P.NISSEN,T.BOESEN JRNL TITL HIGH-RESOLUTION STRUCTURE OF A TYPE IV PILIN FROM THE JRNL TITL 2 METAL- REDUCING BACTERIUM SHEWANELLA ONEIDENSIS. JRNL REF BMC STRUCT.BIOL. V. 15 4 2015 JRNL REFN ISSN 1472-6807 JRNL PMID 25886849 JRNL DOI 10.1186/S12900-015-0031-7 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.960 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.275 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.46 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.11 REMARK 3 NUMBER OF REFLECTIONS : 34971 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1835 REMARK 3 R VALUE (WORKING SET) : 0.1794 REMARK 3 FREE R VALUE : 0.2201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.9 REMARK 3 FREE R VALUE TEST SET COUNT : 3473 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2896 - 5.7279 1.00 1305 144 0.1698 0.1966 REMARK 3 2 5.7279 - 4.5475 1.00 1290 146 0.1529 0.1769 REMARK 3 3 4.5475 - 3.9730 1.00 1297 142 0.1543 0.1937 REMARK 3 4 3.9730 - 3.6098 1.00 1311 143 0.1641 0.2124 REMARK 3 5 3.6098 - 3.3512 0.99 1274 139 0.1787 0.1993 REMARK 3 6 3.3512 - 3.1536 0.99 1300 139 0.1913 0.2203 REMARK 3 7 3.1536 - 2.9957 0.99 1277 143 0.2008 0.2300 REMARK 3 8 2.9957 - 2.8653 0.99 1264 141 0.1928 0.2264 REMARK 3 9 2.8653 - 2.7550 0.98 1277 141 0.2085 0.2815 REMARK 3 10 2.7550 - 2.6600 0.97 1261 138 0.1905 0.2279 REMARK 3 11 2.6600 - 2.5768 0.99 1290 144 0.2018 0.2525 REMARK 3 12 2.5768 - 2.5032 0.96 1274 143 0.2026 0.2574 REMARK 3 13 2.5032 - 2.4373 0.98 1271 134 0.2061 0.2758 REMARK 3 14 2.4373 - 2.3778 0.95 1238 139 0.1848 0.2450 REMARK 3 15 2.3778 - 2.3237 0.98 1275 138 0.1925 0.2230 REMARK 3 16 2.3237 - 2.2743 0.95 1244 136 0.1913 0.2968 REMARK 3 17 2.2743 - 2.2288 0.96 1233 132 0.1843 0.2444 REMARK 3 18 2.2288 - 2.1867 0.95 1228 136 0.1793 0.1941 REMARK 3 19 2.1867 - 2.1477 0.95 1213 137 0.1814 0.2698 REMARK 3 20 2.1477 - 2.1113 0.96 1257 139 0.1875 0.2208 REMARK 3 21 2.1113 - 2.0772 0.93 1206 138 0.1850 0.2271 REMARK 3 22 2.0772 - 2.0453 0.95 1241 133 0.1775 0.2436 REMARK 3 23 2.0453 - 2.0152 0.95 1208 136 0.1669 0.1878 REMARK 3 24 2.0152 - 1.9868 0.95 1244 135 0.1696 0.2032 REMARK 3 25 1.9868 - 1.9599 0.95 1220 137 0.1667 0.2322 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.18 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.37 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1450 REMARK 3 ANGLE : 1.021 1969 REMARK 3 CHIRALITY : 0.045 201 REMARK 3 PLANARITY : 0.005 261 REMARK 3 DIHEDRAL : 11.822 525 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4949 42.0112 35.8884 REMARK 3 T TENSOR REMARK 3 T11: 0.1494 T22: 0.2542 REMARK 3 T33: 0.1965 T12: -0.0108 REMARK 3 T13: -0.0207 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 5.3556 L22: 7.4398 REMARK 3 L33: 9.1793 L12: -2.1442 REMARK 3 L13: -4.0427 L23: 4.7399 REMARK 3 S TENSOR REMARK 3 S11: 0.1823 S12: 0.0103 S13: 0.0069 REMARK 3 S21: 0.1259 S22: -0.1255 S23: 0.1132 REMARK 3 S31: -0.1598 S32: -0.6446 S33: 0.0793 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4284 45.9079 33.0302 REMARK 3 T TENSOR REMARK 3 T11: 0.1423 T22: 0.1658 REMARK 3 T33: 0.2591 T12: 0.0201 REMARK 3 T13: -0.0173 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.6308 L22: 4.6866 REMARK 3 L33: 4.2939 L12: -0.2498 REMARK 3 L13: -1.1971 L23: 1.3972 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: 0.1612 S13: 0.0404 REMARK 3 S21: -0.1089 S22: 0.0844 S23: -0.3743 REMARK 3 S31: -0.1966 S32: -0.1510 S33: -0.1192 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8152 51.1964 45.8593 REMARK 3 T TENSOR REMARK 3 T11: 0.4193 T22: 0.2207 REMARK 3 T33: 0.3466 T12: 0.0569 REMARK 3 T13: -0.0679 T23: -0.0585 REMARK 3 L TENSOR REMARK 3 L11: 4.2822 L22: 2.3834 REMARK 3 L33: 7.3489 L12: -0.6044 REMARK 3 L13: -0.8677 L23: 0.8182 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: -0.1945 S13: 0.5884 REMARK 3 S21: 0.9358 S22: 0.2100 S23: -0.2355 REMARK 3 S31: -0.2280 S32: -0.3204 S33: -0.1570 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4520 39.0722 45.5571 REMARK 3 T TENSOR REMARK 3 T11: 0.4483 T22: 0.2303 REMARK 3 T33: 0.2903 T12: 0.0260 REMARK 3 T13: -0.0735 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 6.3985 L22: 5.2893 REMARK 3 L33: 3.3573 L12: -0.5544 REMARK 3 L13: -4.0692 L23: 2.2387 REMARK 3 S TENSOR REMARK 3 S11: -0.4887 S12: -0.3231 S13: 0.3411 REMARK 3 S21: 1.2360 S22: 0.3145 S23: -0.2538 REMARK 3 S31: 0.9750 S32: -0.0917 S33: 0.2006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8430 31.9153 30.1028 REMARK 3 T TENSOR REMARK 3 T11: 0.1525 T22: 0.1694 REMARK 3 T33: 0.2265 T12: 0.0297 REMARK 3 T13: -0.0453 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 6.5285 L22: 5.9815 REMARK 3 L33: 8.9415 L12: -1.1259 REMARK 3 L13: -2.6172 L23: 2.6048 REMARK 3 S TENSOR REMARK 3 S11: 0.2105 S12: 0.4814 S13: 0.0812 REMARK 3 S21: -0.3390 S22: -0.0820 S23: 0.0196 REMARK 3 S31: -0.3326 S32: -0.1592 S33: -0.1219 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.8512 24.7311 29.5191 REMARK 3 T TENSOR REMARK 3 T11: 0.1651 T22: 0.2403 REMARK 3 T33: 0.2823 T12: 0.0106 REMARK 3 T13: -0.0538 T23: -0.1019 REMARK 3 L TENSOR REMARK 3 L11: 3.0278 L22: 3.2271 REMARK 3 L33: 7.0109 L12: -0.3675 REMARK 3 L13: -0.5963 L23: 0.3180 REMARK 3 S TENSOR REMARK 3 S11: 0.1428 S12: 0.4120 S13: -0.5485 REMARK 3 S21: -0.1344 S22: 0.0523 S23: -0.1139 REMARK 3 S31: 0.4439 S32: 0.1226 S33: -0.2318 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1614 25.3721 38.3835 REMARK 3 T TENSOR REMARK 3 T11: 0.2266 T22: 0.1998 REMARK 3 T33: 0.2805 T12: -0.0368 REMARK 3 T13: 0.0127 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 5.9405 L22: 4.8084 REMARK 3 L33: 7.6524 L12: -0.4962 REMARK 3 L13: 1.4527 L23: 0.7542 REMARK 3 S TENSOR REMARK 3 S11: 0.0444 S12: -0.5181 S13: -0.2660 REMARK 3 S21: 0.5254 S22: -0.1605 S23: 0.2219 REMARK 3 S31: -0.0396 S32: -0.3405 S33: 0.0622 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4US7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-JUL-14. REMARK 100 THE PDBE ID CODE IS EBI-61167. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.8 REMARK 200 MONOCHROMATOR : SI-111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34976 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.96 REMARK 200 RESOLUTION RANGE LOW (A) : 48.80 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 17.5 REMARK 200 R MERGE (I) : 0.04 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 51.72 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 13.9 REMARK 200 R MERGE FOR SHELL (I) : 0.08 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 21.15 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: DATA WERE COLLECTED FOR SULFUR SAD REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.4 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG 8K 100 MM TAPS PH 8.0 REMARK 280 150 MM AMS REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.41500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.27500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.88000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.41500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.27500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.88000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.41500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.27500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.88000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.41500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.27500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 54.88000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 85 -8.70 70.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1091 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 36 O REMARK 620 2 PHE B 44 O 116.1 REMARK 620 3 ASN B 38 OD1 91.4 90.9 REMARK 620 4 HOH B2024 O 163.3 79.0 81.0 REMARK 620 5 HOH B2021 O 90.6 84.1 175.0 98.2 REMARK 620 6 HOH B2022 O 70.2 173.6 89.8 94.8 95.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1090 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B1091 REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL G REMAINDER OF TEV CLEAVAGE SITE DBREF 4US7 A 2 89 UNP Q8EII5 Q8EII5_SHEON 36 123 DBREF 4US7 B 2 89 UNP Q8EII5 Q8EII5_SHEON 36 123 SEQADV 4US7 GLY A 1 UNP Q8EII5 CLONING ARTIFACT SEQADV 4US7 GLY B 1 UNP Q8EII5 CLONING ARTIFACT SEQRES 1 A 89 GLY LYS GLN GLY ARG ARG PHE ASP ALA GLN GLN TYR LEU SEQRES 2 A 89 VAL THR SER ALA GLN ALA LEU GLU ARG HIS TYR SER ARG SEQRES 3 A 89 ASN GLY LEU TYR PRO ALA SER GLN SER LEU ALA ASN SER SEQRES 4 A 89 PRO TYR TYR SER PHE SER TYR THR PRO THR ALA ASP LYS SEQRES 5 A 89 PHE GLY PHE SER LEU LYS ALA VAL PRO THR ASN ARG GLN SEQRES 6 A 89 SER ASP PRO CYS GLY THR LEU SER LEU ASP HIS LYS GLY SEQRES 7 A 89 VAL ARG VAL PRO ALA THR ASN CYS TRP SER HIS SEQRES 1 B 89 GLY LYS GLN GLY ARG ARG PHE ASP ALA GLN GLN TYR LEU SEQRES 2 B 89 VAL THR SER ALA GLN ALA LEU GLU ARG HIS TYR SER ARG SEQRES 3 B 89 ASN GLY LEU TYR PRO ALA SER GLN SER LEU ALA ASN SER SEQRES 4 B 89 PRO TYR TYR SER PHE SER TYR THR PRO THR ALA ASP LYS SEQRES 5 B 89 PHE GLY PHE SER LEU LYS ALA VAL PRO THR ASN ARG GLN SEQRES 6 B 89 SER ASP PRO CYS GLY THR LEU SER LEU ASP HIS LYS GLY SEQRES 7 B 89 VAL ARG VAL PRO ALA THR ASN CYS TRP SER HIS HET SO4 B1090 5 HET NA B1091 1 HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION FORMUL 3 SO4 O4 S 2- FORMUL 4 NA NA 1+ FORMUL 5 HOH *125(H2 O) HELIX 1 1 GLY A 1 GLY A 28 1 28 HELIX 2 2 GLY B 1 GLY B 28 1 28 SHEET 1 AA 4 TYR A 42 PRO A 48 0 SHEET 2 AA 4 PHE A 55 PRO A 61 -1 O SER A 56 N THR A 47 SHEET 3 AA 4 LEU A 72 ASP A 75 -1 O LEU A 72 N ALA A 59 SHEET 4 AA 4 ARG A 80 VAL A 81 -1 O VAL A 81 N SER A 73 SHEET 1 BA 4 TYR B 42 PRO B 48 0 SHEET 2 BA 4 PHE B 55 PRO B 61 -1 O SER B 56 N THR B 47 SHEET 3 BA 4 LEU B 72 ASP B 75 -1 O LEU B 72 N ALA B 59 SHEET 4 BA 4 ARG B 80 VAL B 81 -1 O VAL B 81 N SER B 73 SSBOND 1 CYS A 69 CYS A 86 1555 1555 2.05 SSBOND 2 CYS B 69 CYS B 86 1555 1555 2.04 LINK NA NA B1091 O LEU B 36 1555 1555 2.60 LINK NA NA B1091 O PHE B 44 1555 1555 2.44 LINK NA NA B1091 OD1 ASN B 38 1555 1555 2.55 LINK NA NA B1091 O HOH B2024 1555 1555 2.57 LINK NA NA B1091 O HOH B2021 1555 1555 2.53 LINK NA NA B1091 O HOH B2022 1555 1555 2.50 CISPEP 1 VAL A 81 PRO A 82 0 -6.91 CISPEP 2 VAL B 81 PRO B 82 0 -5.39 SITE 1 AC1 5 ARG A 5 GLY B 1 LYS B 2 GLN B 3 SITE 2 AC1 5 GLY B 4 SITE 1 AC2 6 LEU B 36 ASN B 38 PHE B 44 HOH B2021 SITE 2 AC2 6 HOH B2022 HOH B2024 CRYST1 48.830 96.550 109.760 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020479 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010357 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009111 0.00000