HEADER HYDROLASE 17-JUL-14 4UT2 TITLE X-RAY STRUCTURE OF THE HUMAN PP1 GAMMA CATALYTIC SUBUNIT TREATED WITH TITLE 2 ASCORBATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC COMPND 3 SUBUNIT; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: PROTEIN PHOSPHATASE 1 GAMMA ISOFORM, PP-1G, PROTEIN COMPND 6 PHOSPHATE; COMPND 7 EC: 3.1.3.16; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH5[ALPHA]; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 668369 KEYWDS HYDROLASE, METAL CENTER, METALLOPROTEIN, ENZYME ACTIVATION, KEYWDS 2 PHOSPHOPROTEIN PHOSPHATASES EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPEC,M.ZEH SILVA,C.FOTINOU,R.A.STEINER REVDAT 3 10-JAN-24 4UT2 1 REMARK LINK REVDAT 2 25-JAN-17 4UT2 1 JRNL REVDAT 1 22-JUL-15 4UT2 0 JRNL AUTH C.X.SANTOS,A.D.HAFSTAD,M.BERETTA,M.ZHANG,C.MOLENAAR,J.KOPEC, JRNL AUTH 2 D.FOTINOU,T.V.MURRAY,A.M.COBB,D.MARTIN,M.ZEH SILVA, JRNL AUTH 3 N.ANILKUMAR,K.SCHRODER,C.M.SHANAHAN,A.C.BREWER,R.P.BRANDES, JRNL AUTH 4 E.BLANC,M.PARSONS,V.BELOUSOV,R.CAMMACK,R.C.HIDER, JRNL AUTH 5 R.A.STEINER,A.M.SHAH JRNL TITL TARGETED REDOX INHIBITION OF PROTEIN PHOSPHATASE 1 BY NOX4 JRNL TITL 2 REGULATES EIF2ALPHA-MEDIATED STRESS SIGNALING. JRNL REF EMBO J. V. 35 319 2016 JRNL REFN ISSN 0261-4189 JRNL PMID 26742780 JRNL DOI 10.15252/EMBJ.201592394 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 40219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2111 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2908 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.2950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4748 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -16.21000 REMARK 3 B22 (A**2) : 33.48000 REMARK 3 B33 (A**2) : -17.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.591 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4870 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4619 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6570 ; 0.998 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10645 ; 0.757 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 588 ; 5.472 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 241 ;35.047 ;24.108 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 855 ;12.835 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;12.957 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 703 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5467 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1145 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2352 ; 1.097 ; 3.061 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2351 ; 1.094 ; 3.060 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2937 ; 1.844 ; 4.583 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2518 ; 1.116 ; 3.188 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4UT2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1290061266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42357 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 64.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2O8A REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19.3 % PEG 3350, 200 MM NACL, 100 MM REMARK 280 TRIS PH 9.0 SOAKING IN RESERVOIR ENRICHED BY 25MM ASCORBATE FOR REMARK 280 30 MINUTES CRYOPROTECTION 20% GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.12000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 LEU A 4 REMARK 465 ASP A 5 REMARK 465 GLU A 300 REMARK 465 LYS A 301 REMARK 465 LYS A 302 REMARK 465 LYS A 303 REMARK 465 PRO A 304 REMARK 465 ASN A 305 REMARK 465 ALA A 306 REMARK 465 THR A 307 REMARK 465 ARG A 308 REMARK 465 PRO A 309 REMARK 465 VAL A 310 REMARK 465 THR A 311 REMARK 465 PRO A 312 REMARK 465 PRO A 313 REMARK 465 ARG A 314 REMARK 465 GLY A 315 REMARK 465 MET A 316 REMARK 465 ILE A 317 REMARK 465 THR A 318 REMARK 465 LYS A 319 REMARK 465 GLN A 320 REMARK 465 ALA A 321 REMARK 465 LYS A 322 REMARK 465 LYS A 323 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 3 REMARK 465 LEU B 4 REMARK 465 ASP B 5 REMARK 465 GLU B 300 REMARK 465 LYS B 301 REMARK 465 LYS B 302 REMARK 465 LYS B 303 REMARK 465 PRO B 304 REMARK 465 ASN B 305 REMARK 465 ALA B 306 REMARK 465 THR B 307 REMARK 465 ARG B 308 REMARK 465 PRO B 309 REMARK 465 VAL B 310 REMARK 465 THR B 311 REMARK 465 PRO B 312 REMARK 465 PRO B 313 REMARK 465 ARG B 314 REMARK 465 GLY B 315 REMARK 465 MET B 316 REMARK 465 ILE B 317 REMARK 465 THR B 318 REMARK 465 LYS B 319 REMARK 465 GLN B 320 REMARK 465 ALA B 321 REMARK 465 LYS B 322 REMARK 465 LYS B 323 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 150.66 77.64 REMARK 500 ARG A 96 -52.51 76.09 REMARK 500 TYR A 144 -106.95 -139.45 REMARK 500 GLU A 167 16.76 58.58 REMARK 500 SER A 224 -157.74 63.30 REMARK 500 ALA A 247 -125.43 -134.17 REMARK 500 HIS A 248 -13.29 77.56 REMARK 500 ASP B 95 150.83 76.99 REMARK 500 ARG B 96 -52.76 76.32 REMARK 500 TYR B 144 -106.33 -138.78 REMARK 500 GLU B 167 17.03 58.13 REMARK 500 SER B 224 -158.05 63.08 REMARK 500 ALA B 247 -125.55 -133.86 REMARK 500 HIS B 248 -13.30 77.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2064 DISTANCE = 6.18 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 400 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 64 OD2 REMARK 620 2 HIS A 66 NE2 108.3 REMARK 620 3 ASP A 92 OD2 96.4 98.7 REMARK 620 4 PO4 A 501 O2 157.6 88.9 94.9 REMARK 620 5 HOH A2040 O 85.2 166.5 78.7 78.1 REMARK 620 6 HOH A2041 O 93.3 88.9 165.1 72.3 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 ASN A 124 OD1 93.9 REMARK 620 3 HIS A 173 NE2 75.8 87.3 REMARK 620 4 HIS A 248 ND1 161.3 98.9 91.0 REMARK 620 5 PO4 A 501 O3 97.2 82.9 167.6 98.0 REMARK 620 6 HOH A2040 O 78.4 160.7 107.6 93.3 80.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 400 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 64 OD2 REMARK 620 2 HIS B 66 NE2 104.4 REMARK 620 3 ASP B 92 OD2 92.2 91.2 REMARK 620 4 PO4 B 501 O4 164.9 88.1 96.0 REMARK 620 5 HOH B2038 O 92.1 158.8 74.7 77.9 REMARK 620 6 HOH B2039 O 88.1 84.2 175.3 84.8 109.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 92 OD2 REMARK 620 2 ASN B 124 OD1 97.8 REMARK 620 3 HIS B 173 NE2 81.3 93.0 REMARK 620 4 HIS B 248 ND1 163.3 98.5 94.2 REMARK 620 5 PO4 B 501 O1 95.0 80.1 171.7 91.4 REMARK 620 6 HOH B2038 O 79.8 152.1 113.9 87.4 72.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UT3 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE HUMAN PP1 GAMMA CATALYTIC SUBUNIT TREATED REMARK 900 WITH HYDROGEN PEROXIDE DBREF 4UT2 A 1 323 UNP P36873 PP1G_HUMAN 1 323 DBREF 4UT2 B 1 323 UNP P36873 PP1G_HUMAN 1 323 SEQRES 1 A 323 MET ALA ASP LEU ASP LYS LEU ASN ILE ASP SER ILE ILE SEQRES 2 A 323 GLN ARG LEU LEU GLU VAL ARG GLY SER LYS PRO GLY LYS SEQRES 3 A 323 ASN VAL GLN LEU GLN GLU ASN GLU ILE ARG GLY LEU CYS SEQRES 4 A 323 LEU LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU SEQRES 5 A 323 LEU GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE SEQRES 6 A 323 HIS GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR SEQRES 7 A 323 GLY GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY SEQRES 8 A 323 ASP TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE SEQRES 9 A 323 CYS LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN SEQRES 10 A 323 PHE PHE LEU LEU ARG GLY ASN HIS GLU CSO ALA SER ILE SEQRES 11 A 323 ASN ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG SEQRES 12 A 323 TYR ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE SEQRES 13 A 323 ASN CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE SEQRES 14 A 323 PHE CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER SEQRES 15 A 323 MET GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL SEQRES 16 A 323 PRO ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP SEQRES 17 A 323 PRO ASP LYS ASP VAL LEU GLY TRP GLY GLU ASN ASP ARG SEQRES 18 A 323 GLY VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS SEQRES 19 A 323 PHE LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA SEQRES 20 A 323 HIS GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS SEQRES 21 A 323 ARG GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CSO SEQRES 22 A 323 GLY GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP SEQRES 23 A 323 GLU THR LEU MET CSO SER PHE GLN ILE LEU LYS PRO ALA SEQRES 24 A 323 GLU LYS LYS LYS PRO ASN ALA THR ARG PRO VAL THR PRO SEQRES 25 A 323 PRO ARG GLY MET ILE THR LYS GLN ALA LYS LYS SEQRES 1 B 323 MET ALA ASP LEU ASP LYS LEU ASN ILE ASP SER ILE ILE SEQRES 2 B 323 GLN ARG LEU LEU GLU VAL ARG GLY SER LYS PRO GLY LYS SEQRES 3 B 323 ASN VAL GLN LEU GLN GLU ASN GLU ILE ARG GLY LEU CYS SEQRES 4 B 323 LEU LYS SER ARG GLU ILE PHE LEU SER GLN PRO ILE LEU SEQRES 5 B 323 LEU GLU LEU GLU ALA PRO LEU LYS ILE CYS GLY ASP ILE SEQRES 6 B 323 HIS GLY GLN TYR TYR ASP LEU LEU ARG LEU PHE GLU TYR SEQRES 7 B 323 GLY GLY PHE PRO PRO GLU SER ASN TYR LEU PHE LEU GLY SEQRES 8 B 323 ASP TYR VAL ASP ARG GLY LYS GLN SER LEU GLU THR ILE SEQRES 9 B 323 CYS LEU LEU LEU ALA TYR LYS ILE LYS TYR PRO GLU ASN SEQRES 10 B 323 PHE PHE LEU LEU ARG GLY ASN HIS GLU CSO ALA SER ILE SEQRES 11 B 323 ASN ARG ILE TYR GLY PHE TYR ASP GLU CYS LYS ARG ARG SEQRES 12 B 323 TYR ASN ILE LYS LEU TRP LYS THR PHE THR ASP CYS PHE SEQRES 13 B 323 ASN CYS LEU PRO ILE ALA ALA ILE VAL ASP GLU LYS ILE SEQRES 14 B 323 PHE CYS CYS HIS GLY GLY LEU SER PRO ASP LEU GLN SER SEQRES 15 B 323 MET GLU GLN ILE ARG ARG ILE MET ARG PRO THR ASP VAL SEQRES 16 B 323 PRO ASP GLN GLY LEU LEU CYS ASP LEU LEU TRP SER ASP SEQRES 17 B 323 PRO ASP LYS ASP VAL LEU GLY TRP GLY GLU ASN ASP ARG SEQRES 18 B 323 GLY VAL SER PHE THR PHE GLY ALA GLU VAL VAL ALA LYS SEQRES 19 B 323 PHE LEU HIS LYS HIS ASP LEU ASP LEU ILE CYS ARG ALA SEQRES 20 B 323 HIS GLN VAL VAL GLU ASP GLY TYR GLU PHE PHE ALA LYS SEQRES 21 B 323 ARG GLN LEU VAL THR LEU PHE SER ALA PRO ASN TYR CSO SEQRES 22 B 323 GLY GLU PHE ASP ASN ALA GLY ALA MET MET SER VAL ASP SEQRES 23 B 323 GLU THR LEU MET CSO SER PHE GLN ILE LEU LYS PRO ALA SEQRES 24 B 323 GLU LYS LYS LYS PRO ASN ALA THR ARG PRO VAL THR PRO SEQRES 25 B 323 PRO ARG GLY MET ILE THR LYS GLN ALA LYS LYS MODRES 4UT2 CSO A 127 CYS S-HYDROXYCYSTEINE MODRES 4UT2 CSO A 273 CYS S-HYDROXYCYSTEINE MODRES 4UT2 CSO A 291 CYS S-HYDROXYCYSTEINE MODRES 4UT2 CSO B 127 CYS S-HYDROXYCYSTEINE MODRES 4UT2 CSO B 273 CYS S-HYDROXYCYSTEINE MODRES 4UT2 CSO B 291 CYS S-HYDROXYCYSTEINE HET CSO A 127 7 HET CSO A 273 7 HET CSO A 291 7 HET CSO B 127 7 HET CSO B 273 7 HET CSO B 291 7 HET MN A 400 1 HET MN A 401 1 HET PO4 A 501 5 HET MN B 400 1 HET MN B 401 1 HET PO4 B 501 5 HETNAM CSO S-HYDROXYCYSTEINE HETNAM MN MANGANESE (II) ION HETNAM PO4 PHOSPHATE ION FORMUL 1 CSO 6(C3 H7 N O3 S) FORMUL 3 MN 4(MN 2+) FORMUL 5 PO4 2(O4 P 3-) FORMUL 9 HOH *234(H2 O) HELIX 1 1 ASN A 8 VAL A 19 1 12 HELIX 2 2 GLN A 31 GLN A 49 1 19 HELIX 3 3 GLN A 68 GLY A 80 1 13 HELIX 4 4 GLN A 99 TYR A 114 1 16 HELIX 5 5 CSO A 127 ARG A 132 1 6 HELIX 6 6 GLY A 135 TYR A 144 1 10 HELIX 7 7 ASN A 145 ASN A 157 1 13 HELIX 8 8 SER A 182 ARG A 188 1 7 HELIX 9 9 GLY A 199 SER A 207 1 9 HELIX 10 10 GLY A 228 ASP A 240 1 13 HELIX 11 11 ASN A 271 GLU A 275 5 5 HELIX 12 12 ASN B 8 VAL B 19 1 12 HELIX 13 13 GLN B 31 GLN B 49 1 19 HELIX 14 14 GLN B 68 GLY B 80 1 13 HELIX 15 15 GLN B 99 TYR B 114 1 16 HELIX 16 16 CSO B 127 ARG B 132 1 6 HELIX 17 17 GLY B 135 TYR B 144 1 10 HELIX 18 18 ASN B 145 ASN B 157 1 13 HELIX 19 19 SER B 182 ARG B 188 1 7 HELIX 20 20 GLY B 199 SER B 207 1 9 HELIX 21 21 GLY B 228 ASP B 240 1 13 HELIX 22 22 ASN B 271 GLU B 275 5 5 SHEET 1 AA 6 LEU A 52 LEU A 55 0 SHEET 2 AA 6 ALA A 162 VAL A 165 1 O ALA A 162 N LEU A 53 SHEET 3 AA 6 ILE A 169 CYS A 171 -1 O ILE A 169 N VAL A 165 SHEET 4 AA 6 LEU A 243 ARG A 246 1 O LEU A 243 N PHE A 170 SHEET 5 AA 6 LEU A 263 LEU A 266 1 O VAL A 264 N ARG A 246 SHEET 6 AA 6 TYR A 255 PHE A 258 -1 O GLU A 256 N THR A 265 SHEET 1 AB 5 PHE A 118 LEU A 120 0 SHEET 2 AB 5 TYR A 87 PHE A 89 1 O TYR A 87 N PHE A 119 SHEET 3 AB 5 LEU A 59 CYS A 62 1 O LYS A 60 N LEU A 88 SHEET 4 AB 5 GLY A 280 VAL A 285 -1 O MET A 283 N ILE A 61 SHEET 5 AB 5 CSO A 291 LEU A 296 -1 O SER A 292 N SER A 284 SHEET 1 AC 3 ASP A 208 PRO A 209 0 SHEET 2 AC 3 PHE A 225 PHE A 227 1 O PHE A 225 N ASP A 208 SHEET 3 AC 3 TRP A 216 GLU A 218 -1 O GLY A 217 N THR A 226 SHEET 1 BA 6 LEU B 52 LEU B 55 0 SHEET 2 BA 6 ALA B 162 VAL B 165 1 O ALA B 162 N LEU B 53 SHEET 3 BA 6 ILE B 169 CYS B 171 -1 O ILE B 169 N VAL B 165 SHEET 4 BA 6 LEU B 243 ARG B 246 1 O LEU B 243 N PHE B 170 SHEET 5 BA 6 LEU B 263 LEU B 266 1 O VAL B 264 N ARG B 246 SHEET 6 BA 6 TYR B 255 PHE B 258 -1 O GLU B 256 N THR B 265 SHEET 1 BB 5 PHE B 118 LEU B 120 0 SHEET 2 BB 5 TYR B 87 PHE B 89 1 O TYR B 87 N PHE B 119 SHEET 3 BB 5 LEU B 59 CYS B 62 1 O LYS B 60 N LEU B 88 SHEET 4 BB 5 GLY B 280 VAL B 285 -1 O MET B 283 N ILE B 61 SHEET 5 BB 5 CSO B 291 LEU B 296 -1 O SER B 292 N SER B 284 SHEET 1 BC 3 ASP B 208 PRO B 209 0 SHEET 2 BC 3 PHE B 225 PHE B 227 1 O PHE B 225 N ASP B 208 SHEET 3 BC 3 TRP B 216 GLU B 218 -1 O GLY B 217 N THR B 226 LINK C GLU A 126 N CSO A 127 1555 1555 1.33 LINK C CSO A 127 N ALA A 128 1555 1555 1.33 LINK C TYR A 272 N CSO A 273 1555 1555 1.34 LINK C CSO A 273 N GLY A 274 1555 1555 1.33 LINK C MET A 290 N CSO A 291 1555 1555 1.33 LINK C CSO A 291 N SER A 292 1555 1555 1.34 LINK C GLU B 126 N CSO B 127 1555 1555 1.33 LINK C CSO B 127 N ALA B 128 1555 1555 1.33 LINK C TYR B 272 N CSO B 273 1555 1555 1.34 LINK C CSO B 273 N GLY B 274 1555 1555 1.33 LINK C MET B 290 N CSO B 291 1555 1555 1.33 LINK C CSO B 291 N SER B 292 1555 1555 1.33 LINK OD2 ASP A 64 MN MN A 400 1555 1555 2.10 LINK NE2 HIS A 66 MN MN A 400 1555 1555 2.24 LINK OD2 ASP A 92 MN MN A 400 1555 1555 2.34 LINK OD2 ASP A 92 MN MN A 401 1555 1555 2.31 LINK OD1 ASN A 124 MN MN A 401 1555 1555 2.15 LINK NE2 HIS A 173 MN MN A 401 1555 1555 2.36 LINK ND1 HIS A 248 MN MN A 401 1555 1555 2.18 LINK MN MN A 400 O2 PO4 A 501 1555 1555 2.39 LINK MN MN A 400 O HOH A2040 1555 1555 2.02 LINK MN MN A 400 O HOH A2041 1555 1555 2.44 LINK MN MN A 401 O3 PO4 A 501 1555 1555 2.04 LINK MN MN A 401 O HOH A2040 1555 1555 2.06 LINK OD2 ASP B 64 MN MN B 400 1555 1555 2.08 LINK NE2 HIS B 66 MN MN B 400 1555 1555 2.36 LINK OD2 ASP B 92 MN MN B 400 1555 1555 2.49 LINK OD2 ASP B 92 MN MN B 401 1555 1555 2.23 LINK OD1 ASN B 124 MN MN B 401 1555 1555 2.10 LINK NE2 HIS B 173 MN MN B 401 1555 1555 2.19 LINK ND1 HIS B 248 MN MN B 401 1555 1555 2.23 LINK MN MN B 400 O4 PO4 B 501 1555 1555 2.35 LINK MN MN B 400 O HOH B2038 1555 1555 1.99 LINK MN MN B 400 O HOH B2039 1555 1555 2.07 LINK MN MN B 401 O1 PO4 B 501 1555 1555 2.48 LINK MN MN B 401 O HOH B2038 1555 1555 2.04 CISPEP 1 ALA A 57 PRO A 58 0 4.95 CISPEP 2 PRO A 82 PRO A 83 0 5.35 CISPEP 3 ARG A 191 PRO A 192 0 -2.09 CISPEP 4 ALA B 57 PRO B 58 0 5.07 CISPEP 5 PRO B 82 PRO B 83 0 5.78 CISPEP 6 ARG B 191 PRO B 192 0 -0.71 SITE 1 AC1 7 ASP A 64 HIS A 66 ASP A 92 MN A 401 SITE 2 AC1 7 PO4 A 501 HOH A2040 HOH A2041 SITE 1 AC2 7 ASP A 92 ASN A 124 HIS A 173 HIS A 248 SITE 2 AC2 7 MN A 400 PO4 A 501 HOH A2040 SITE 1 AC3 13 HIS A 66 ASP A 92 ARG A 96 ASN A 124 SITE 2 AC3 13 HIS A 125 ARG A 221 HIS A 248 MN A 400 SITE 3 AC3 13 MN A 401 HOH A2040 HOH A2041 HOH A2116 SITE 4 AC3 13 HOH A2132 SITE 1 AC4 7 ASP B 64 HIS B 66 ASP B 92 MN B 401 SITE 2 AC4 7 PO4 B 501 HOH B2038 HOH B2039 SITE 1 AC5 7 ASP B 92 ASN B 124 HIS B 173 HIS B 248 SITE 2 AC5 7 MN B 400 PO4 B 501 HOH B2038 SITE 1 AC6 13 HIS B 66 ASP B 92 ARG B 96 ASN B 124 SITE 2 AC6 13 HIS B 125 ARG B 221 HIS B 248 MN B 400 SITE 3 AC6 13 MN B 401 HOH B2038 HOH B2039 HOH B2090 SITE 4 AC6 13 HOH B2101 CRYST1 38.550 90.240 91.130 90.00 90.05 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025940 0.000000 0.000023 0.00000 SCALE2 0.000000 0.011082 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010973 0.00000