HEADER HYDROLASE 24-JUL-14 4UU0 TITLE CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF TITLE 2 14:1 PC CAVEAT 4UU0 TG1 A 1003 C4 AND C12 ARE NOT PLANAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERCA1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SARCOPLASMIC ENDOPLASMIC RETICULUM CALCIUM ATPASE; COMPND 5 EC: 3.6.3.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 ORGAN: HIND LEG MUSCLE; SOURCE 6 TISSUE: FAST TWITCH SKELETAL MUSCLE KEYWDS HYDROLASE, CA2+-ATPASE, P-TYPE ATPASE, CATION PUMP, MEMBRANE PROTEIN, KEYWDS 2 LIPID BINDING, LIPID BINDING SITES, DMPC EXPDTA X-RAY DIFFRACTION AUTHOR N.D.DRACHMANN,C.OLESEN,J.V.MOELLER,Z.GUO,P.NISSEN,M.BUBLITZ REVDAT 3 10-JAN-24 4UU0 1 COMPND REMARK HETNAM LINK REVDAT 2 23-OCT-19 4UU0 1 SEQADV LINK REVDAT 1 01-OCT-14 4UU0 0 JRNL AUTH N.D.DRACHMANN,C.OLESEN,J.V.MOLLER,Z.GUO,P.NISSEN,M.BUBLITZ JRNL TITL COMPARING CRYSTAL STRUCTURES OF CA(2+) -ATPASE IN THE JRNL TITL 2 PRESENCE OF DIFFERENT LIPIDS. JRNL REF FEBS J. V. 281 4249 2014 JRNL REFN ISSN 1742-464X JRNL PMID 25103814 JRNL DOI 10.1111/FEBS.12957 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 54035 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 72.9347 - 6.6694 1.00 3060 162 0.1883 0.2043 REMARK 3 2 6.6694 - 5.2942 1.00 2827 148 0.2090 0.3049 REMARK 3 3 5.2942 - 4.6251 1.00 2774 146 0.1703 0.2554 REMARK 3 4 4.6251 - 4.2023 1.00 2706 143 0.1600 0.1951 REMARK 3 5 4.2023 - 3.9011 1.00 2742 145 0.1743 0.2412 REMARK 3 6 3.9011 - 3.6711 1.00 2718 143 0.1866 0.2340 REMARK 3 7 3.6711 - 3.4872 1.00 2699 142 0.1949 0.2650 REMARK 3 8 3.4872 - 3.3354 1.00 2667 140 0.1995 0.2673 REMARK 3 9 3.3354 - 3.2070 1.00 2680 142 0.2054 0.2675 REMARK 3 10 3.2070 - 3.0964 1.00 2635 138 0.2161 0.3282 REMARK 3 11 3.0964 - 2.9996 1.00 2685 141 0.2113 0.2905 REMARK 3 12 2.9996 - 2.9138 1.00 2682 141 0.2143 0.2803 REMARK 3 13 2.9138 - 2.8371 1.00 2612 138 0.2173 0.2718 REMARK 3 14 2.8371 - 2.7679 1.00 2673 140 0.2107 0.2808 REMARK 3 15 2.7679 - 2.7050 1.00 2629 138 0.2216 0.2918 REMARK 3 16 2.7050 - 2.6474 1.00 2582 136 0.2320 0.2903 REMARK 3 17 2.6474 - 2.5944 1.00 2687 141 0.2588 0.3340 REMARK 3 18 2.5944 - 2.5455 1.00 2616 137 0.2695 0.3464 REMARK 3 19 2.5455 - 2.5000 1.00 2659 141 0.2941 0.3660 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 7888 REMARK 3 ANGLE : 1.143 10693 REMARK 3 CHIRALITY : 0.044 1237 REMARK 3 PLANARITY : 0.005 1358 REMARK 3 DIHEDRAL : 15.528 3003 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:43 OR RESID 123:228) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4810 6.9001 -17.3414 REMARK 3 T TENSOR REMARK 3 T11: 0.3611 T22: 0.3917 REMARK 3 T33: 0.6084 T12: 0.0061 REMARK 3 T13: -0.0828 T23: 0.1147 REMARK 3 L TENSOR REMARK 3 L11: 4.5738 L22: 3.9696 REMARK 3 L33: 7.0478 L12: -0.4553 REMARK 3 L13: 0.5082 L23: 0.5060 REMARK 3 S TENSOR REMARK 3 S11: 0.1909 S12: -0.2773 S13: -0.5338 REMARK 3 S21: 0.0037 S22: -0.0426 S23: -0.3675 REMARK 3 S31: 0.5729 S32: -0.0593 S33: -0.0918 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 44:122 OR RESID 229:329) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7961 25.9090 -63.4153 REMARK 3 T TENSOR REMARK 3 T11: 1.2664 T22: 0.7858 REMARK 3 T33: 0.5837 T12: -0.1037 REMARK 3 T13: -0.0704 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 0.9408 L22: 0.3303 REMARK 3 L33: 6.1353 L12: -0.1689 REMARK 3 L13: 2.0224 L23: -0.6105 REMARK 3 S TENSOR REMARK 3 S11: -0.0428 S12: 0.4686 S13: -0.1230 REMARK 3 S21: -0.7135 S22: 0.0669 S23: 0.0861 REMARK 3 S31: 0.1525 S32: 0.2879 S33: -0.1003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 330:359 OR RESID 605:745 OR RESID REMARK 3 1301 OR RESID 1302 OR RESID 1995:1998) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4663 38.8943 -27.0998 REMARK 3 T TENSOR REMARK 3 T11: 0.7104 T22: 0.4470 REMARK 3 T33: 0.5338 T12: 0.0317 REMARK 3 T13: -0.1810 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 2.8373 L22: 3.3099 REMARK 3 L33: 4.8576 L12: -0.1243 REMARK 3 L13: 0.0712 L23: 0.6886 REMARK 3 S TENSOR REMARK 3 S11: -0.1733 S12: -0.2485 S13: 0.1529 REMARK 3 S21: -0.3353 S22: -0.1020 S23: 0.3811 REMARK 3 S31: -0.6937 S32: -0.2917 S33: 0.2784 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESID 360:604 REMARK 3 ORIGIN FOR THE GROUP (A): 9.7022 38.8170 -0.6796 REMARK 3 T TENSOR REMARK 3 T11: 0.7375 T22: 0.4590 REMARK 3 T33: 0.6657 T12: -0.1217 REMARK 3 T13: -0.2624 T23: 0.0673 REMARK 3 L TENSOR REMARK 3 L11: 2.9173 L22: 4.9636 REMARK 3 L33: 5.4690 L12: -0.1785 REMARK 3 L13: -1.1493 L23: -0.4068 REMARK 3 S TENSOR REMARK 3 S11: -0.0754 S12: 0.0751 S13: -0.1880 REMARK 3 S21: 0.3387 S22: -0.0956 S23: -0.5949 REMARK 3 S31: -0.2822 S32: 0.5518 S33: 0.1463 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESID 746:994 REMARK 3 ORIGIN FOR THE GROUP (A): -15.3159 46.5495 -73.3758 REMARK 3 T TENSOR REMARK 3 T11: 2.0420 T22: 1.1343 REMARK 3 T33: 0.7293 T12: -0.1416 REMARK 3 T13: -0.2115 T23: 0.1908 REMARK 3 L TENSOR REMARK 3 L11: 1.8018 L22: 0.2533 REMARK 3 L33: 1.8389 L12: -0.2230 REMARK 3 L13: 0.8195 L23: -0.3614 REMARK 3 S TENSOR REMARK 3 S11: -0.4467 S12: 0.8806 S13: 0.1930 REMARK 3 S21: -0.7308 S22: 0.1233 S23: 0.1305 REMARK 3 S31: -1.0967 S32: 0.0462 S33: 0.2464 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUL-14. REMARK 100 THE DEPOSITION ID IS D_1290061308. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90501 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54047 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 72.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.20 REMARK 200 R MERGE FOR SHELL (I) : 1.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2C8K REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21 % (W/V) PEG2000, 100 MM MGSO4, 3 % REMARK 280 (V/V) TERT-BUOH, 10 % (V/V) GLYCEROL, PH 6.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 291.61500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.58500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 145.80750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.58500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 437.42250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.58500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 145.80750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.58500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.58500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 437.42250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 291.61500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 42 150.16 -49.04 REMARK 500 GLU A 44 153.62 -49.49 REMARK 500 PHE A 78 40.30 -104.81 REMARK 500 THR A 86 41.97 -82.55 REMARK 500 ASN A 330 -2.10 67.54 REMARK 500 LYS A 352 -60.97 -90.50 REMARK 500 ASP A 373 88.07 -156.24 REMARK 500 PRO A 391 22.68 -73.89 REMARK 500 ASN A 398 50.02 37.94 REMARK 500 ASP A 399 -12.04 71.04 REMARK 500 ASN A 421 115.17 -167.50 REMARK 500 ASN A 453 62.28 39.69 REMARK 500 GLU A 458 91.45 -56.41 REMARK 500 LYS A 502 -10.42 46.80 REMARK 500 SER A 503 129.79 -8.06 REMARK 500 THR A 558 53.61 37.93 REMARK 500 GLU A 588 43.38 -103.76 REMARK 500 ASP A 627 155.63 -46.34 REMARK 500 ASP A 703 -18.96 -155.49 REMARK 500 ASP A 738 -0.94 66.26 REMARK 500 GLU A 785 109.97 -51.56 REMARK 500 VAL A 798 -65.76 -105.96 REMARK 500 TYR A 867 57.40 -147.53 REMARK 500 GLN A 869 58.67 -91.30 REMARK 500 LEU A 870 22.48 -78.69 REMARK 500 GLN A 875 57.80 -91.20 REMARK 500 PHE A 883 -55.35 -124.84 REMARK 500 CYS A 888 -18.70 -142.49 REMARK 500 TYR A 949 -34.99 -131.72 REMARK 500 ASP A 963 -175.79 -69.93 REMARK 500 TYR A 991 -51.25 -125.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2192 DISTANCE = 9.30 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1995 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 244 OE1 REMARK 620 2 LEU A 711 O 160.4 REMARK 620 3 LYS A 712 O 86.0 76.1 REMARK 620 4 ALA A 714 O 93.7 93.4 87.5 REMARK 620 5 GLU A 732 OE2 65.8 120.0 128.4 134.0 REMARK 620 6 GLU A 732 OE1 99.4 95.5 162.0 109.2 42.7 REMARK 620 7 HOH A2186 O 86.0 85.3 87.5 175.0 50.2 75.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1996 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 703 OD1 REMARK 620 2 ASP A 707 OD2 68.1 REMARK 620 3 HOH A2097 O 95.1 83.2 REMARK 620 4 HOH A2181 O 88.1 156.2 99.9 REMARK 620 5 HOH A2185 O 172.4 105.3 80.0 98.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TG1 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1995 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1996 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBU A 1997 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1998 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UU1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF (SR) CALCIUM-ATPASE E2(TG) IN THE PRESENCE OF REMARK 900 DOPC DBREF 4UU0 A 1 994 UNP B6CAM1 B6CAM1_RABIT 1 994 SEQADV 4UU0 ACE A 0 UNP B6CAM1 ACETYLATION SEQRES 1 A 995 ACE MET GLU ALA ALA HIS SER LYS SER THR GLU GLU CYS SEQRES 2 A 995 LEU ALA TYR PHE GLY VAL SER GLU THR THR GLY LEU THR SEQRES 3 A 995 PRO ASP GLN VAL LYS ARG HIS LEU GLU LYS TYR GLY HIS SEQRES 4 A 995 ASN GLU LEU PRO ALA GLU GLU GLY LYS SER LEU TRP GLU SEQRES 5 A 995 LEU VAL ILE GLU GLN PHE GLU ASP LEU LEU VAL ARG ILE SEQRES 6 A 995 LEU LEU LEU ALA ALA CYS ILE SER PHE VAL LEU ALA TRP SEQRES 7 A 995 PHE GLU GLU GLY GLU GLU THR ILE THR ALA PHE VAL GLU SEQRES 8 A 995 PRO PHE VAL ILE LEU LEU ILE LEU ILE ALA ASN ALA ILE SEQRES 9 A 995 VAL GLY VAL TRP GLN GLU ARG ASN ALA GLU ASN ALA ILE SEQRES 10 A 995 GLU ALA LEU LYS GLU TYR GLU PRO GLU MET GLY LYS VAL SEQRES 11 A 995 TYR ARG ALA ASP ARG LYS SER VAL GLN ARG ILE LYS ALA SEQRES 12 A 995 ARG ASP ILE VAL PRO GLY ASP ILE VAL GLU VAL ALA VAL SEQRES 13 A 995 GLY ASP LYS VAL PRO ALA ASP ILE ARG ILE LEU SER ILE SEQRES 14 A 995 LYS SER THR THR LEU ARG VAL ASP GLN SER ILE LEU THR SEQRES 15 A 995 GLY GLU SER VAL SER VAL ILE LYS HIS THR GLU PRO VAL SEQRES 16 A 995 PRO ASP PRO ARG ALA VAL ASN GLN ASP LYS LYS ASN MET SEQRES 17 A 995 LEU PHE SER GLY THR ASN ILE ALA ALA GLY LYS ALA LEU SEQRES 18 A 995 GLY ILE VAL ALA THR THR GLY VAL SER THR GLU ILE GLY SEQRES 19 A 995 LYS ILE ARG ASP GLN MET ALA ALA THR GLU GLN ASP LYS SEQRES 20 A 995 THR PRO LEU GLN GLN LYS LEU ASP GLU PHE GLY GLU GLN SEQRES 21 A 995 LEU SER LYS VAL ILE SER LEU ILE CYS VAL ALA VAL TRP SEQRES 22 A 995 LEU ILE ASN ILE GLY HIS PHE ASN ASP PRO VAL HIS GLY SEQRES 23 A 995 GLY SER TRP ILE ARG GLY ALA ILE TYR TYR PHE LYS ILE SEQRES 24 A 995 ALA VAL ALA LEU ALA VAL ALA ALA ILE PRO GLU GLY LEU SEQRES 25 A 995 PRO ALA VAL ILE THR THR CYS LEU ALA LEU GLY THR ARG SEQRES 26 A 995 ARG MET ALA LYS LYS ASN ALA ILE VAL ARG SER LEU PRO SEQRES 27 A 995 SER VAL GLU THR LEU GLY CYS THR SER VAL ILE CYS SER SEQRES 28 A 995 ASP LYS THR GLY THR LEU THR THR ASN GLN MET SER VAL SEQRES 29 A 995 CYS LYS MET PHE ILE ILE ASP LYS VAL ASP GLY ASP PHE SEQRES 30 A 995 CYS SER LEU ASN GLU PHE SER ILE THR GLY SER THR TYR SEQRES 31 A 995 ALA PRO GLU GLY GLU VAL LEU LYS ASN ASP LYS PRO ILE SEQRES 32 A 995 ARG SER GLY GLN PHE ASP GLY LEU VAL GLU LEU ALA THR SEQRES 33 A 995 ILE CYS ALA LEU CYS ASN ASP SER SER LEU ASP PHE ASN SEQRES 34 A 995 GLU THR LYS GLY VAL TYR GLU LYS VAL GLY GLU ALA THR SEQRES 35 A 995 GLU THR ALA LEU THR THR LEU VAL GLU LYS MET ASN VAL SEQRES 36 A 995 PHE ASN THR GLU VAL ARG ASN LEU SER LYS VAL GLU ARG SEQRES 37 A 995 ALA ASN ALA CYS ASN SER VAL ILE ARG GLN LEU MET LYS SEQRES 38 A 995 LYS GLU PHE THR LEU GLU PHE SER ARG ASP ARG LYS SER SEQRES 39 A 995 MET SER VAL TYR CYS SER PRO ALA LYS SER SER ARG ALA SEQRES 40 A 995 ALA VAL GLY ASN LYS MET PHE VAL LYS GLY ALA PRO GLU SEQRES 41 A 995 GLY VAL ILE ASP ARG CYS ASN TYR VAL ARG VAL GLY THR SEQRES 42 A 995 THR ARG VAL PRO MET THR GLY PRO VAL LYS GLU LYS ILE SEQRES 43 A 995 LEU SER VAL ILE LYS GLU TRP GLY THR GLY ARG ASP THR SEQRES 44 A 995 LEU ARG CYS LEU ALA LEU ALA THR ARG ASP THR PRO PRO SEQRES 45 A 995 LYS ARG GLU GLU MET VAL LEU ASP ASP SER SER ARG PHE SEQRES 46 A 995 MET GLU TYR GLU THR ASP LEU THR PHE VAL GLY VAL VAL SEQRES 47 A 995 GLY MET LEU ASP PRO PRO ARG LYS GLU VAL MET GLY SER SEQRES 48 A 995 ILE GLN LEU CYS ARG ASP ALA GLY ILE ARG VAL ILE MET SEQRES 49 A 995 ILE THR GLY ASP ASN LYS GLY THR ALA ILE ALA ILE CYS SEQRES 50 A 995 ARG ARG ILE GLY ILE PHE GLY GLU ASN GLU GLU VAL ALA SEQRES 51 A 995 ASP ARG ALA TYR THR GLY ARG GLU PHE ASP ASP LEU PRO SEQRES 52 A 995 LEU ALA GLU GLN ARG GLU ALA CYS ARG ARG ALA CYS CYS SEQRES 53 A 995 PHE ALA ARG VAL GLU PRO SER HIS LYS SER LYS ILE VAL SEQRES 54 A 995 GLU TYR LEU GLN SER TYR ASP GLU ILE THR ALA MET THR SEQRES 55 A 995 GLY ASP GLY VAL ASN ASP ALA PRO ALA LEU LYS LYS ALA SEQRES 56 A 995 GLU ILE GLY ILE ALA MET GLY SER GLY THR ALA VAL ALA SEQRES 57 A 995 LYS THR ALA SER GLU MET VAL LEU ALA ASP ASP ASN PHE SEQRES 58 A 995 SER THR ILE VAL ALA ALA VAL GLU GLU GLY ARG ALA ILE SEQRES 59 A 995 TYR ASN ASN MET LYS GLN PHE ILE ARG TYR LEU ILE SER SEQRES 60 A 995 SER ASN VAL GLY GLU VAL VAL CYS ILE PHE LEU THR ALA SEQRES 61 A 995 ALA LEU GLY LEU PRO GLU ALA LEU ILE PRO VAL GLN LEU SEQRES 62 A 995 LEU TRP VAL ASN LEU VAL THR ASP GLY LEU PRO ALA THR SEQRES 63 A 995 ALA LEU GLY PHE ASN PRO PRO ASP LEU ASP ILE MET ASP SEQRES 64 A 995 ARG PRO PRO ARG SER PRO LYS GLU PRO LEU ILE SER GLY SEQRES 65 A 995 TRP LEU PHE PHE ARG TYR MET ALA ILE GLY GLY TYR VAL SEQRES 66 A 995 GLY ALA ALA THR VAL GLY ALA ALA ALA TRP TRP PHE MET SEQRES 67 A 995 TYR ALA GLU ASP GLY PRO GLY VAL THR TYR HIS GLN LEU SEQRES 68 A 995 THR HIS PHE MET GLN CYS THR GLU ASP HIS PRO HIS PHE SEQRES 69 A 995 GLU GLY LEU ASP CYS GLU ILE PHE GLU ALA PRO GLU PRO SEQRES 70 A 995 MET THR MET ALA LEU SER VAL LEU VAL THR ILE GLU MET SEQRES 71 A 995 CYS ASN ALA LEU ASN SER LEU SER GLU ASN GLN SER LEU SEQRES 72 A 995 MET ARG MET PRO PRO TRP VAL ASN ILE TRP LEU LEU GLY SEQRES 73 A 995 SER ILE CYS LEU SER MET SER LEU HIS PHE LEU ILE LEU SEQRES 74 A 995 TYR VAL ASP PRO LEU PRO MET ILE PHE LYS LEU LYS ALA SEQRES 75 A 995 LEU ASP LEU THR GLN TRP LEU MET VAL LEU LYS ILE SER SEQRES 76 A 995 LEU PRO VAL ILE GLY LEU ASP GLU ILE LEU LYS PHE ILE SEQRES 77 A 995 ALA ARG ASN TYR LEU GLU GLY HET ACE A 0 3 HET TG1 A1003 46 HET GOL A1301 6 HET K A1995 1 HET MG A1996 1 HET TBU A1997 5 HET SO4 A1998 5 HETNAM ACE ACETYL GROUP HETNAM TG1 OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, 6BETA, HETNAM 2 TG1 6ABETA, 7BETA, 8ALPHA(Z), 9BALPHA]]-6-(ACETYLOXY)-2,3, HETNAM 3 TG1 -3A,4,5,6,6A,7,8,9B-DECAHYDRO-3,3A-DIHYDROXY-3,6,9- HETNAM 4 TG1 TRIMETHYL-8-[(2-METHYL-1-OXO-2-BUTENYL)OX Y]-2-OXO-4- HETNAM 5 TG1 (1-OXOBUTOXY)-AZULENO[4,5-B]FURAN-7-YL ESTER HETNAM GOL GLYCEROL HETNAM K POTASSIUM ION HETNAM MG MAGNESIUM ION HETNAM TBU TERTIARY-BUTYL ALCOHOL HETNAM SO4 SULFATE ION HETSYN TG1 THAPSIGARGIN HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TBU 2-METHYL-2-PROPANOL FORMUL 1 ACE C2 H4 O FORMUL 2 TG1 C34 H50 O12 FORMUL 3 GOL C3 H8 O3 FORMUL 4 K K 1+ FORMUL 5 MG MG 2+ FORMUL 6 TBU C4 H10 O FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *192(H2 O) HELIX 1 1 ALA A 3 LYS A 7 5 5 HELIX 2 2 SER A 8 GLY A 17 1 10 HELIX 3 3 THR A 25 GLY A 37 1 13 HELIX 4 4 SER A 48 GLN A 56 1 9 HELIX 5 5 ASP A 59 PHE A 78 1 20 HELIX 6 6 VAL A 89 ASN A 111 1 23 HELIX 7 7 ASN A 114 LYS A 120 1 7 HELIX 8 8 GLU A 121 GLU A 123 5 3 HELIX 9 9 ARG A 143 ILE A 145 5 3 HELIX 10 10 GLN A 177 GLY A 182 1 6 HELIX 11 11 VAL A 200 LYS A 204 5 5 HELIX 12 12 THR A 226 SER A 229 5 4 HELIX 13 13 THR A 230 ALA A 241 1 12 HELIX 14 14 THR A 247 ASN A 275 1 29 HELIX 15 15 ILE A 276 ASN A 280 5 5 HELIX 16 16 SER A 287 ILE A 307 1 21 HELIX 17 17 GLY A 310 LYS A 328 1 19 HELIX 18 18 PRO A 337 THR A 345 1 9 HELIX 19 19 ARG A 403 GLN A 406 5 4 HELIX 20 20 PHE A 407 CYS A 420 1 14 HELIX 21 21 GLU A 439 ASN A 453 1 15 HELIX 22 22 SER A 463 ALA A 468 1 6 HELIX 23 23 ASN A 469 ARG A 476 1 8 HELIX 24 24 ALA A 517 ARG A 524 1 8 HELIX 25 25 THR A 538 GLY A 555 1 18 HELIX 26 26 LYS A 572 MET A 576 5 5 HELIX 27 27 ARG A 583 GLU A 588 1 6 HELIX 28 28 GLU A 606 ALA A 617 1 12 HELIX 29 29 ASN A 628 ILE A 639 1 12 HELIX 30 30 GLY A 655 ASP A 660 1 6 HELIX 31 31 PRO A 662 ALA A 673 1 12 HELIX 32 32 GLU A 680 SER A 693 1 14 HELIX 33 33 GLY A 704 ASN A 706 5 3 HELIX 34 34 ASP A 707 ALA A 714 1 8 HELIX 35 35 THR A 724 ALA A 730 1 7 HELIX 36 36 ASN A 739 GLY A 782 1 44 HELIX 37 37 ILE A 788 VAL A 798 1 11 HELIX 38 38 ASP A 800 GLY A 808 1 9 HELIX 39 39 SER A 830 MET A 857 1 28 HELIX 40 40 HIS A 872 THR A 877 5 6 HELIX 41 41 CYS A 888 GLU A 892 5 5 HELIX 42 42 ALA A 893 ASN A 914 1 22 HELIX 43 43 ASN A 930 VAL A 950 1 21 HELIX 44 44 PRO A 952 LYS A 958 1 7 HELIX 45 45 THR A 965 LEU A 975 1 11 HELIX 46 46 PRO A 976 TYR A 991 1 16 SHEET 1 AA 6 GLN A 138 LYS A 141 0 SHEET 2 AA 6 MET A 126 TYR A 130 -1 O GLY A 127 N ILE A 140 SHEET 3 AA 6 ILE A 150 ALA A 154 -1 O ILE A 150 N TYR A 130 SHEET 4 AA 6 LYS A 218 THR A 225 -1 O ALA A 219 N VAL A 153 SHEET 5 AA 6 ASP A 162 ILE A 168 -1 O ASP A 162 N ALA A 224 SHEET 6 AA 6 MET A 207 LEU A 208 -1 O LEU A 208 N ILE A 163 SHEET 1 AB 3 VAL A 187 ILE A 188 0 SHEET 2 AB 3 ARG A 174 ASP A 176 -1 O VAL A 175 N VAL A 187 SHEET 3 AB 3 ASN A 213 ALA A 216 -1 O ASN A 213 N ASP A 176 SHEET 1 AC 8 ALA A 331 VAL A 333 0 SHEET 2 AC 8 MET A 733 LEU A 735 -1 O VAL A 734 N ILE A 332 SHEET 3 AC 8 ILE A 716 MET A 720 1 O GLY A 717 N MET A 733 SHEET 4 AC 8 THR A 698 GLY A 702 1 O THR A 698 N ILE A 716 SHEET 5 AC 8 VAL A 347 ASP A 351 1 O VAL A 347 N ALA A 699 SHEET 6 AC 8 ARG A 620 THR A 625 1 O ARG A 620 N ILE A 348 SHEET 7 AC 8 CYS A 675 ALA A 677 1 O PHE A 676 N THR A 625 SHEET 8 AC 8 ALA A 652 THR A 654 1 O TYR A 653 N ALA A 677 SHEET 1 AD 9 LYS A 400 PRO A 401 0 SHEET 2 AD 9 VAL A 395 LYS A 397 -1 O LYS A 397 N LYS A 400 SHEET 3 AD 9 PHE A 376 ILE A 384 -1 O SER A 383 N LEU A 396 SHEET 4 AD 9 SER A 362 ASP A 373 -1 O CYS A 364 N ILE A 384 SHEET 5 AD 9 LEU A 591 LEU A 600 -1 O VAL A 594 N ILE A 369 SHEET 6 AD 9 ARG A 560 ARG A 567 -1 O ARG A 560 N MET A 599 SHEET 7 AD 9 LYS A 511 GLY A 516 -1 O MET A 512 N ARG A 567 SHEET 8 AD 9 SER A 493 PRO A 500 -1 O MET A 494 N LYS A 515 SHEET 9 AD 9 MET A 479 SER A 488 -1 O LYS A 480 N SER A 499 SHEET 1 AE 7 LYS A 400 PRO A 401 0 SHEET 2 AE 7 VAL A 395 LYS A 397 -1 O LYS A 397 N LYS A 400 SHEET 3 AE 7 PHE A 376 ILE A 384 -1 O SER A 383 N LEU A 396 SHEET 4 AE 7 SER A 362 ASP A 373 -1 O CYS A 364 N ILE A 384 SHEET 5 AE 7 LEU A 591 LEU A 600 -1 O VAL A 594 N ILE A 369 SHEET 6 AE 7 CYS A 525 VAL A 530 1 N ASN A 526 O LEU A 591 SHEET 7 AE 7 THR A 533 PRO A 536 -1 O THR A 533 N VAL A 530 SHEET 1 AF 2 SER A 424 PHE A 427 0 SHEET 2 AF 2 TYR A 434 VAL A 437 -1 O GLU A 435 N ASP A 426 SSBOND 1 CYS A 876 CYS A 888 1555 1555 2.03 LINK C ACE A 0 N MET A 1 1555 1555 1.32 LINK OE1 GLN A 244 K K A1995 1555 1555 2.66 LINK OD1 ASP A 703 MG MG A1996 1555 1555 2.50 LINK OD2 ASP A 707 MG MG A1996 1555 1555 2.52 LINK O LEU A 711 K K A1995 1555 1555 2.65 LINK O LYS A 712 K K A1995 1555 1555 2.69 LINK O ALA A 714 K K A1995 1555 1555 2.55 LINK OE2 GLU A 732 K K A1995 1555 1555 3.16 LINK OE1 GLU A 732 K K A1995 1555 1555 2.78 LINK K K A1995 O HOH A2186 1555 1555 2.75 LINK MG MG A1996 O HOH A2097 1555 1555 2.30 LINK MG MG A1996 O HOH A2181 1555 1555 2.17 LINK MG MG A1996 O HOH A2185 1555 1555 1.94 SITE 1 AC1 13 LEU A 253 GLU A 255 PHE A 256 GLN A 259 SITE 2 AC1 13 LEU A 260 VAL A 263 ILE A 267 ALA A 306 SITE 3 AC1 13 ILE A 765 VAL A 769 ILE A 829 PHE A 834 SITE 4 AC1 13 MET A 838 SITE 1 AC2 6 LYS A 492 PRO A 518 ASN A 628 ARG A 678 SITE 2 AC2 6 HOH A2138 HOH A2155 SITE 1 AC3 6 GLN A 244 LEU A 711 LYS A 712 ALA A 714 SITE 2 AC3 6 GLU A 732 HOH A2186 SITE 1 AC4 6 ASP A 703 ASP A 707 SO4 A1998 HOH A2097 SITE 2 AC4 6 HOH A2181 HOH A2185 SITE 1 AC5 4 THR A 353 GLY A 626 SO4 A1998 HOH A2100 SITE 1 AC6 6 ASP A 351 THR A 353 ASP A 703 MG A1996 SITE 2 AC6 6 TBU A1997 HOH A2097 CRYST1 71.170 71.170 583.230 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014051 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014051 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001715 0.00000 HETATM 1 C ACE A 0 -12.552 4.817 -18.287 1.00 45.92 C ANISOU 1 C ACE A 0 4124 6666 6659 -1504 -984 1169 C HETATM 2 O ACE A 0 -13.759 4.739 -18.077 1.00 51.41 O ANISOU 2 O ACE A 0 4544 7716 7274 -1712 -978 1184 O HETATM 3 CH3 ACE A 0 -11.941 4.297 -19.563 1.00 57.05 C ANISOU 3 CH3 ACE A 0 5775 7723 8180 -1455 -1090 1020 C