HEADER TRANSCRIPTION 31-JUL-14 4UUT TITLE CRYSTAL STRUCTURE OF THE ULTRABITHORAX PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOMEOTIC PROTEIN ULTRABITHORAX; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HOMEODOMAIN AND UBDA, RESIDUES 233-324; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PDEST14; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: UBXIVA PDEST14 KEYWDS TRANSCRIPTION, UBX, HOMEOTIC PROTEIN, TRANSCRIPTION FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR N.FOOS,M.J.MATE,M.ORTIZ-LOMBARDIA REVDAT 1 18-FEB-15 4UUT 0 JRNL AUTH N.FOOS,C.MAUREL-ZAFFRAN,M.J.MATE,R.VINCENTELLI,M.HAINAUT, JRNL AUTH 2 H.BERENGER,J.PRADEL,A.J.SAURIN,M.ORTIZ-LOMBARDIA,Y.GRABA JRNL TITL A FLEXIBLE EXTENSION OF THE DROSOPHILA ULTRABITHORAX JRNL TITL 2 HOMEODOMAIN DEFINES A NOVEL HOX/PBC INTERACTION MODE. JRNL REF STRUCTURE V. 23 270 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 25651060 JRNL DOI 10.1016/J.STR.2014.12.011 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.68 REMARK 3 NUMBER OF REFLECTIONS : 4390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.2192 REMARK 3 R VALUE (WORKING SET) : 0.2175 REMARK 3 FREE R VALUE : 0.2366 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.25 REMARK 3 FREE R VALUE TEST SET COUNT : 406 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 5 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.68 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1198 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2439 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1092 REMARK 3 BIN R VALUE (WORKING SET) : 0.2401 REMARK 3 BIN FREE R VALUE : 0.2882 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.85 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 106 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 593 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 101.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.0000 REMARK 3 B22 (A**2) : 0.0000 REMARK 3 B33 (A**2) : 0.0000 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : 0.0000 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.503 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.386 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.257 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.346 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.248 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.9378 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.9407 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 618 ; 2.00 ; HARMONIC REMARK 3 BOND ANGLES : 827 ; 2.00 ; HARMONIC REMARK 3 TORSION ANGLES : 240 ; 2.00 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 19 ; 2.00 ; HARMONIC REMARK 3 GENERAL PLANES : 83 ; 5.00 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 618 ; 20.00 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 78 ; 5.00 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 698 ; 4.00 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.31 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.69 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -12.0782 15.4626 -3.2635 REMARK 3 T TENSOR REMARK 3 T11: -0.1874 T22: 0.0380 REMARK 3 T33: -0.1093 T12: 0.0998 REMARK 3 T13: -0.0117 T23: 0.0851 REMARK 3 L TENSOR REMARK 3 L11: 5.2072 L22: 2.4925 REMARK 3 L33: 1.6875 L12: -1.9989 REMARK 3 L13: -2.9831 L23: 1.3350 REMARK 3 S TENSOR REMARK 3 S11: -0.0211 S12: 0.3164 S13: 0.1117 REMARK 3 S21: -0.4276 S22: -0.1226 S23: 0.0817 REMARK 3 S31: 0.1926 S32: -0.3112 S33: 0.1437 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UUT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-14. REMARK 100 THE PDBE ID CODE IS EBI-61420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.974716 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL (PILATUS 6M) REMARK 200 DETECTOR MANUFACTURER : DECTRIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 4428 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.80 REMARK 200 RESOLUTION RANGE LOW (A) : 69.75 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.7 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.80 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.8 REMARK 200 R MERGE FOR SHELL (I) : 0.58 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: LOCAL STRUCTURE OF UBX REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.5 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% 1-4 BUTANEDIOL, 0.2M LISO4, REMARK 280 0.1M MES PH 6 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.32400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.32400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.32400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.32400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 49.32400 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 49.32400 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 49.32400 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 49.32400 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 49.32400 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 49.32400 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 49.32400 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 49.32400 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 49.32400 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 73.98600 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 24.66200 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 73.98600 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 73.98600 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 73.98600 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 24.66200 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 73.98600 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 24.66200 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 73.98600 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 24.66200 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 73.98600 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 24.66200 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 24.66200 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 73.98600 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 24.66200 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 73.98600 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 73.98600 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 73.98600 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 24.66200 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 73.98600 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 73.98600 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 24.66200 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 24.66200 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 24.66200 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 73.98600 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 24.66200 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 73.98600 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 24.66200 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 73.98600 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 73.98600 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 73.98600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2002 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2004 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLN A -18 REMARK 465 ALA A -17 REMARK 465 SER A -16 REMARK 465 ASN A -15 REMARK 465 HIS A -14 REMARK 465 THR A -13 REMARK 465 PHE A -12 REMARK 465 TYR A -11 REMARK 465 PRO A -10 REMARK 465 TRP A -9 REMARK 465 MET A -8 REMARK 465 ALA A -7 REMARK 465 ILE A -6 REMARK 465 ALA A -5 REMARK 465 GLY A -4 REMARK 465 THR A -3 REMARK 465 ASN A -2 REMARK 465 GLY A -1 REMARK 465 LEU A 0 REMARK 465 ARG A 1 REMARK 465 ARG A 2 REMARK 465 ARG A 3 REMARK 465 GLY A 4 REMARK 465 ARG A 5 REMARK 465 GLN A 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1074 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1075 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1076 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1077 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1078 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1079 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4UUS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING REMARK 900 THE UBDA MOTIF DBREF 4UUT A -18 73 UNP P83949 UBX_DROME 233 324 SEQADV 4UUT MET A -19 UNP P83949 EXPRESSION TAG SEQRES 1 A 93 MET GLN ALA SER ASN HIS THR PHE TYR PRO TRP MET ALA SEQRES 2 A 93 ILE ALA GLY THR ASN GLY LEU ARG ARG ARG GLY ARG GLN SEQRES 3 A 93 THR TYR THR ARG TYR GLN THR LEU GLU LEU GLU LYS GLU SEQRES 4 A 93 PHE HIS THR ASN HIS TYR LEU THR ARG ARG ARG ARG ILE SEQRES 5 A 93 GLU MET ALA HIS ALA LEU CYS LEU THR GLU ARG GLN ILE SEQRES 6 A 93 LYS ILE TRP PHE GLN ASN ARG ARG MET LYS LEU LYS LYS SEQRES 7 A 93 GLU ILE GLN ALA ILE LYS GLU LEU ASN GLU GLN GLU LYS SEQRES 8 A 93 GLN ALA HET SO4 A1074 5 HET SO4 A1075 5 HET SO4 A1076 5 HET CL A1077 1 HET SO4 A1078 5 HET CL A1079 1 HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 3 CL 2(CL 1-) FORMUL 4 HOH *7(H2 O) HELIX 1 1 THR A 9 ASN A 23 1 15 HELIX 2 2 THR A 27 CYS A 39 1 13 HELIX 3 3 THR A 41 LYS A 71 1 31 SITE 1 AC1 2 ARG A 53 HOH A2005 SITE 1 AC2 5 PHE A 20 HIS A 21 HIS A 24 ARG A 28 SITE 2 AC2 5 ARG A 29 SITE 1 AC3 1 MET A 34 SITE 1 AC4 1 ARG A 31 SITE 1 AC5 4 HIS A 21 ARG A 28 ARG A 29 LYS A 71 SITE 1 AC6 1 ARG A 10 CRYST1 98.648 98.648 98.648 90.00 90.00 90.00 P 41 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010137 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010137 0.00000