HEADER    TRANSFERASE                             27-AUG-14   4UXW              
TITLE     STRUCTURE OF DELTA4-DGKA-APO IN 9.9 MAG                               
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DIACYLGLYCEROL KINASE;                                     
COMPND   3 CHAIN: A, B, C;                                                      
COMPND   4 SYNONYM: DIACYLGLYCEROL KINASE-DELTA 4, DAGK, DIGLYCERIDE KINASE,    
COMPND   5 DGK;                                                                 
COMPND   6 EC: 2.7.1.107;                                                       
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12;                          
SOURCE   3 ORGANISM_TAXID: 83333;                                               
SOURCE   4 ATCC: 29425;                                                         
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: WH1061;                                    
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PTRCHISB;                                  
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PTRCHISB-DGKA-DELTA4                      
KEYWDS    TRANSFERASE, DGKA, IN MESO CRYSTALLIZATION, LIPID CUBIC PHASE,        
KEYWDS   2 LIPIDIC CUBIC PHASE, LIPIDIC MESOPHASE, MEMBRANE PROTEIN,            
KEYWDS   3 MONOACYLGLYCEROL                                                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.LI,V.E.PYE,D.ARAGAO,M.CAFFREY                                       
REVDAT   6   07-FEB-24 4UXW    1       REMARK                                   
REVDAT   5   29-MAR-23 4UXW    1       AUTHOR REMARK LINK                       
REVDAT   4   03-APR-19 4UXW    1       REMARK                                   
REVDAT   3   06-MAR-19 4UXW    1       REMARK                                   
REVDAT   2   13-JAN-16 4UXW    1       JRNL                                     
REVDAT   1   30-SEP-15 4UXW    0                                                
JRNL        AUTH   D.LI,P.J.STANSFELD,M.S.P.SANSOM,A.KEOGH,L.VOGELEY,N.HOWE,    
JRNL        AUTH 2 J.A.LYONS,D.ARAGAO,P.FROMME,R.FROMME,S.BASU,I.GROTJOHANN,    
JRNL        AUTH 3 C.KUPITZ,K.RENDEK,U.WEIERSTALL,N.A.ZATSEPIN,V.CHEREZOV,      
JRNL        AUTH 4 W.LIU,S.BANDARU,N.J.ENGLISH,C.GATI,A.BARTY,O.YEFANOV,        
JRNL        AUTH 5 H.N.CHAPMAN,K.DIEDERICHS,M.MESSERSCHMIDT,S.BOUTET,           
JRNL        AUTH 6 G.J.WILLIAMS,M.MARVIN SEIBERT,M.CAFFREY                      
JRNL        TITL   TERNARY STRUCTURE REVEALS MECHANISM OF A MEMBRANE            
JRNL        TITL 2 DIACYLGLYCEROL KINASE.                                       
JRNL        REF    NAT.COMMUN.                   V.   6 10140 2015              
JRNL        REFN                   ESSN 2041-1723                               
JRNL        PMID   26673816                                                     
JRNL        DOI    10.1038/NCOMMS10140                                          
REMARK   2                                                                      
REMARK   2 RESOLUTION.    3.15 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX (PHENIX.REFINE)                               
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ML                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 45.73                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 11121                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.227                           
REMARK   3   R VALUE            (WORKING SET) : 0.224                           
REMARK   3   FREE R VALUE                     : 0.268                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 566                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 45.7381 -  4.9994    0.99     2772   131  0.2239 0.2500        
REMARK   3     2  4.9994 -  3.9689    1.00     2632   145  0.2032 0.2553        
REMARK   3     3  3.9689 -  3.4674    1.00     2577   145  0.2414 0.3143        
REMARK   3     4  3.4674 -  3.1505    1.00     2574   145  0.2716 0.3286        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.420            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.490           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 109.7                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 97.80                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.016           2797                                  
REMARK   3   ANGLE     :  1.286           3762                                  
REMARK   3   CHIRALITY :  0.071            452                                  
REMARK   3   PLANARITY :  0.005            444                                  
REMARK   3   DIHEDRAL  : 14.157           1023                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: THERE ARE THREE NCS-RELATED MOLECULES     
REMARK   3  IN THE ASYMMETRIC UNIT BUT NCS RESTRAINTS WERE NOT USED IN THE      
REMARK   3  REFINEMENT.                                                         
REMARK   4                                                                      
REMARK   4 4UXW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-AUG-14.                  
REMARK 100 THE DEPOSITION ID IS D_1290061567.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 21-JUL-11                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.6                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 23-ID-B                            
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.03320                            
REMARK 200  MONOCHROMATOR                  : SI(111) DOUBLE CRYSTAL CRYO        
REMARK 200                                   -COOLED                            
REMARK 200  OPTICS                         : MIRRORS                            
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : XSCALE                             
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 11151                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 3.150                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 45.730                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.7                               
REMARK 200  DATA REDUNDANCY                : 10.70                              
REMARK 200  R MERGE                    (I) : 0.13000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 11.9000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 3.23                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 99.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 11.00                              
REMARK 200  R MERGE FOR SHELL          (I) : 1.50000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: PDB ENTRY 3ZE5                                       
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 66.14                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.63                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 7-10 %(V/V) 2-METHYL-2, 4-PENTANEDIOL    
REMARK 280  (MPD), 0.1 M SODIUM CHLORIDE, 0.1 M LITHIUM NITRATE, 0.1 M          
REMARK 280  SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED USING THE IN MESO           
REMARK 280  (LIPIDIC CUBIC PHASE) METHOD AT 4 DEGREES CELCIUS WITH THE 9.9      
REMARK 280  MONOACYLGLYCEROL (9.9 MAG) AS THE HOSTING LIPID., TEMPERATURE       
REMARK 280  277K                                                                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   Y,X,-Z                                                  
REMARK 290       5555   X-Y,-Y,-Z+2/3                                           
REMARK 290       6555   -X,-X+Y,-Z+1/3                                          
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       66.44000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000      132.88000            
REMARK 290   SMTRY1   4 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000      132.88000            
REMARK 290   SMTRY1   6 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       66.44000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC                          
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC                   
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 9730 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 15480 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -108.4 KCAL/MOL                       
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLY A    -8                                                      
REMARK 465     HIS A    -7                                                      
REMARK 465     HIS A    -6                                                      
REMARK 465     HIS A    -5                                                      
REMARK 465     HIS A    -4                                                      
REMARK 465     HIS A    -3                                                      
REMARK 465     HIS A    -2                                                      
REMARK 465     GLU A    -1                                                      
REMARK 465     LEU A     0                                                      
REMARK 465     ALA A     1                                                      
REMARK 465     ASN A     2                                                      
REMARK 465     ASN A     3                                                      
REMARK 465     THR A     4                                                      
REMARK 465     THR A     5                                                      
REMARK 465     GLY A     6                                                      
REMARK 465     GLY B    -8                                                      
REMARK 465     HIS B    -7                                                      
REMARK 465     HIS B    -6                                                      
REMARK 465     HIS B    -5                                                      
REMARK 465     HIS B    -4                                                      
REMARK 465     HIS B    -3                                                      
REMARK 465     HIS B    -2                                                      
REMARK 465     GLU B    -1                                                      
REMARK 465     LEU B     0                                                      
REMARK 465     ALA B     1                                                      
REMARK 465     ASN B     2                                                      
REMARK 465     ASN B     3                                                      
REMARK 465     THR B     4                                                      
REMARK 465     GLY C    -8                                                      
REMARK 465     HIS C    -7                                                      
REMARK 465     HIS C    -6                                                      
REMARK 465     HIS C    -5                                                      
REMARK 465     HIS C    -4                                                      
REMARK 465     HIS C    -3                                                      
REMARK 465     HIS C    -2                                                      
REMARK 465     GLU C    -1                                                      
REMARK 465     LEU C     0                                                      
REMARK 465     ALA C     1                                                      
REMARK 465     ASN C     2                                                      
REMARK 465     ASN C     3                                                      
REMARK 465     THR C     4                                                      
REMARK 465     THR C     5                                                      
REMARK 465     GLY C     6                                                      
REMARK 465     PHE C     7                                                      
REMARK 465     THR C     8                                                      
REMARK 465     ARG C     9                                                      
REMARK 465     ILE C    10                                                      
REMARK 465     ILE C    11                                                      
REMARK 465     LYS C    12                                                      
REMARK 465     ALA C    13                                                      
REMARK 465     ALA C    14                                                      
REMARK 465     GLY C    15                                                      
REMARK 465     GLY C   121                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLY A 121    CA   C    O                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A 120     -121.31   -109.18                                   
REMARK 500    GLU C  85     -133.80     51.84                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA C1122  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 GLU C  76   OE2                                                    
REMARK 620 2 GLU C  76   OE1  52.4                                              
REMARK 620 3 NO3 C1121   O1   54.7  88.2                                        
REMARK 620 4 NO3 C1121   N    75.0 115.0  26.9                                  
REMARK 620 5 NO3 C1121   O3  101.3 138.7  52.1  26.7                            
REMARK 620 N                    1     2     3     4                             
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 1122                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 C 1121                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 1122                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC C 1123                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC B 1123                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC B 1124                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 1121                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC8                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC A 1122                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC9                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OLC C 1124                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 4UXX   RELATED DB: PDB                                   
REMARK 900 STRUCTURE OF DELTA4-DGKA WITH AMPPCP IN 9.9 MAG                      
REMARK 900 RELATED ID: 4UXZ   RELATED DB: PDB                                   
REMARK 900 STRUCTURE OF DELTA7-DGKA-SYN IN 7.9 MAG TO 2.18 ANGSTROM RESOLUTION  
REMARK 999                                                                      
REMARK 999 SEQUENCE                                                             
REMARK 999 THE PROTEIN CONTAINS AN N-TERMINAL HIS TAG 'GHHHHHHEL'.              
REMARK 999 COMPARED TO THE WILDTYPE FORM, THE PROTEIN HAS FOUR                  
REMARK 999 MUTATIONS. THEY ARE I53V, I70L, M96L AND V107D.                      
DBREF  4UXW A    1   121  UNP    P0ABN1   KDGL_ECOLI       2    122             
DBREF  4UXW B    1   121  UNP    P0ABN1   KDGL_ECOLI       2    122             
DBREF  4UXW C    1   121  UNP    P0ABN1   KDGL_ECOLI       2    122             
SEQADV 4UXW GLY A   -8  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -7  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -6  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -5  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -4  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -3  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS A   -2  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW GLU A   -1  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW LEU A    0  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW CYS A   53  UNP  P0ABN1    ILE    54 ENGINEERED MUTATION            
SEQADV 4UXW LEU A   70  UNP  P0ABN1    ILE    71 ENGINEERED MUTATION            
SEQADV 4UXW LEU A   96  UNP  P0ABN1    MET    97 ENGINEERED MUTATION            
SEQADV 4UXW ASP A  107  UNP  P0ABN1    VAL   108 ENGINEERED MUTATION            
SEQADV 4UXW GLY B   -8  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -7  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -6  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -5  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -4  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -3  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS B   -2  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW GLU B   -1  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW LEU B    0  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW CYS B   53  UNP  P0ABN1    ILE    54 ENGINEERED MUTATION            
SEQADV 4UXW LEU B   70  UNP  P0ABN1    ILE    71 ENGINEERED MUTATION            
SEQADV 4UXW LEU B   96  UNP  P0ABN1    MET    97 ENGINEERED MUTATION            
SEQADV 4UXW ASP B  107  UNP  P0ABN1    VAL   108 ENGINEERED MUTATION            
SEQADV 4UXW GLY C   -8  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -7  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -6  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -5  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -4  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -3  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW HIS C   -2  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW GLU C   -1  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW LEU C    0  UNP  P0ABN1              EXPRESSION TAG                 
SEQADV 4UXW CYS C   53  UNP  P0ABN1    ILE    54 ENGINEERED MUTATION            
SEQADV 4UXW LEU C   70  UNP  P0ABN1    ILE    71 ENGINEERED MUTATION            
SEQADV 4UXW LEU C   96  UNP  P0ABN1    MET    97 ENGINEERED MUTATION            
SEQADV 4UXW ASP C  107  UNP  P0ABN1    VAL   108 ENGINEERED MUTATION            
SEQRES   1 A  130  GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR          
SEQRES   2 A  130  THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER          
SEQRES   3 A  130  TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA          
SEQRES   4 A  130  PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL          
SEQRES   5 A  130  ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL          
SEQRES   6 A  130  LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU          
SEQRES   7 A  130  LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE          
SEQRES   8 A  130  GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP          
SEQRES   9 A  130  LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA          
SEQRES  10 A  130  VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY          
SEQRES   1 B  130  GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR          
SEQRES   2 B  130  THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER          
SEQRES   3 B  130  TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA          
SEQRES   4 B  130  PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL          
SEQRES   5 B  130  ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL          
SEQRES   6 B  130  LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU          
SEQRES   7 B  130  LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE          
SEQRES   8 B  130  GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP          
SEQRES   9 B  130  LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA          
SEQRES  10 B  130  VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY          
SEQRES   1 C  130  GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR          
SEQRES   2 C  130  THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER          
SEQRES   3 C  130  TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA          
SEQRES   4 C  130  PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU ALA VAL VAL          
SEQRES   5 C  130  ILE ALA CYS TRP LEU ASP VAL ASP ALA CYS THR ARG VAL          
SEQRES   6 C  130  LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU          
SEQRES   7 C  130  LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE          
SEQRES   8 C  130  GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP          
SEQRES   9 C  130  LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA          
SEQRES  10 C  130  VAL ILE THR TRP CYS ILE LEU LEU TRP SER HIS PHE GLY          
HET    OLC  A1121      25                                                       
HET    OLC  A1122      25                                                       
HET    MPD  B1122       8                                                       
HET    OLC  B1123      25                                                       
HET    OLC  B1124      25                                                       
HET    NO3  C1121       4                                                       
HET     NA  C1122       1                                                       
HET    OLC  C1123      25                                                       
HET    OLC  C1124      25                                                       
HETNAM     OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE                   
HETNAM     MPD (4S)-2-METHYL-2,4-PENTANEDIOL                                    
HETNAM     NO3 NITRATE ION                                                      
HETNAM      NA SODIUM ION                                                       
HETSYN     OLC 1-OLEOYL-R-GLYCEROL                                              
FORMUL   4  OLC    6(C21 H40 O4)                                                
FORMUL   6  MPD    C6 H14 O2                                                    
FORMUL   9  NO3    N O3 1-                                                      
FORMUL  10   NA    NA 1+                                                        
HELIX    1   1 PHE A    7  GLU A   28  1                                  22    
HELIX    2   2 GLU A   28  LEU A   48  1                                  21    
HELIX    3   3 ASP A   51  HIS A   87  1                                  37    
HELIX    4   4 GLY A   91  PHE A  120  1                                  30    
HELIX    5   5 THR B    8  GLU B   28  1                                  21    
HELIX    6   6 GLU B   28  LEU B   48  1                                  21    
HELIX    7   7 ASP B   51  TYR B   86  1                                  36    
HELIX    8   8 GLY B   91  PHE B  120  1                                  30    
HELIX    9   9 TYR C   16  GLU C   28  1                                  13    
HELIX   10  10 GLU C   28  LEU C   48  1                                  21    
HELIX   11  11 ASP C   51  ILE C   82  1                                  32    
HELIX   12  12 HIS C   87  PHE C  120  1                                  34    
LINK         OE2 GLU C  76                NA    NA C1122     1555   1555  2.62  
LINK         OE1 GLU C  76                NA    NA C1122     1555   1555  2.41  
LINK         O1  NO3 C1121                NA    NA C1122     1555   1555  3.03  
LINK         N   NO3 C1121                NA    NA C1122     1555   1555  3.01  
LINK         O3  NO3 C1121                NA    NA C1122     1555   1555  2.31  
SITE     1 AC1  4 TYR B  16  LYS C  94  ASP C  95  NO3 C1121                    
SITE     1 AC2  5 TYR B  16  MPD B1122  GLU C  76   NA C1122                    
SITE     2 AC2  5 OLC C1124                                                     
SITE     1 AC3  3 GLU C  76  NO3 C1121  OLC C1124                               
SITE     1 AC4 10 GLY B   6  ARG B   9  ILE B  10  ALA C  30                    
SITE     2 AC4 10 GLN C  33  GLU C  34  GLU C  69  ALA C 108                    
SITE     3 AC4 10 TRP C 112  OLC C1124                                          
SITE     1 AC5  9 SER A  17  ALA B  30  GLU B  34  ALA B  37                    
SITE     2 AC5  9 ALA B  41  ILE B  44  GLU B  69  SER B  98                    
SITE     3 AC5  9 OLC B1124                                                     
SITE     1 AC6 11 ILE A  10  TRP A 117  GLN B  33  GLU B  34                    
SITE     2 AC6 11 ALA B  37  VAL B  38  VAL B  62  VAL B 109                    
SITE     3 AC6 11 CYS B 113  OLC B1123  TRP C  18                               
SITE     1 AC7  4 TRP A  18  ARG A  22  TRP A  25  ILE B 110                    
SITE     1 AC8 12 GLN A  33  GLU A  34  ILE A  44  VAL A  65                    
SITE     2 AC8 12 ILE A 105  ALA A 108  TRP A 112  LEU A 116                    
SITE     3 AC8 12 VAL B  36  LEU B  39  VAL B  43  TRP B  47                    
SITE     1 AC9  9 SER B  17  GLU C  69  ASN C  72  SER C  98                    
SITE     2 AC9  9 LEU C 102  ILE C 106  NO3 C1121   NA C1122                    
SITE     3 AC9  9 OLC C1123                                                     
CRYST1   72.800   72.800  199.320  90.00  90.00 120.00 P 31 2 1     18          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013736  0.007931  0.000000        0.00000                         
SCALE2      0.000000  0.015861  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005017        0.00000