data_4UYI # _entry.id 4UYI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4UYI PDBE EBI-61650 WWPDB D_1290061650 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4UYI _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-09-01 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pinkas, D.M.' 1 'Sanvitale, C.E.' 2 'Strain-Damerell, C.' 3 'Fairhead, M.' 4 'Wang, D.' 5 'Tallant, C.' 6 'Cooper, C.D.O.' 7 'Sorrell, F.J.' 8 'Kopec, J.' 9 'Chaikuad, A.' 10 'Fitzpatrick, F.' 11 'Pike, A.C.W.' 12 'Hozjan, V.' 13 'Ying, Z.' 14 'Roos, A.K.' 15 'Savitsky, P.' 16 'Bradley, A.' 17 'Nowak, R.' 18 'Filippakopoulos, P.' 19 'Krojer, T.' 20 'Burgess-Brown, N.A.' 21 'Marsden, B.D.' 22 'von Delft, F.' 23 'Arrowsmith, C.H.' 24 'Edwards, A.M.' 25 'Bountra, C.' 26 'Bullock, A.' 27 # _citation.id primary _citation.title 'Crystal Structure of the Btb Domain of Human Slx4 (Btbd12)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pinkas, D.M.' 1 primary 'Sanvitale, C.E.' 2 primary 'Strain-Damerell, C.' 3 primary 'Fairhead, M.' 4 primary 'Wang, D.' 5 primary 'Tallant, C.' 6 primary 'Cooper, C.D.O.' 7 primary 'Sorrell, F.J.' 8 primary 'Kopec, J.' 9 primary 'Chaikuad, A.' 10 primary 'Fitzpatrick, F.' 11 primary 'Pike, A.C.W.' 12 primary 'Hozjan, V.' 13 primary 'Ying, Z.' 14 primary 'Roos, A.K.' 15 primary 'Savitsky, P.' 16 primary 'Bradley, A.' 17 primary 'Nowak, R.' 18 primary 'Filippakopoulos, P.' 19 primary 'Krojer, T.' 20 primary 'Burgess-Brown, N.A.' 21 primary 'Marsden, B.D.' 22 primary 'von Delft, F.' 23 primary 'Arrowsmith, C.H.' 24 primary 'Edwards, A.M.' 25 primary 'Bountra, C.' 26 primary 'Bullock, A.' 27 # _cell.entry_id 4UYI _cell.length_a 142.490 _cell.length_b 142.490 _cell.length_c 50.930 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4UYI _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4' 16740.691 1 ? YES 'BTB DOMAIN (BTBD12), UNP RESIDUES 668-796' ? 2 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BTB/POZ DOMAIN-CONTAINING PROTEIN 12, SLX4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSMGRTLLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNE GFSAIEDGVETQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVSELVHLCEQVPIATDSE ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMGRTLLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNE GFSAIEDGVETQRVLLGDVSTEAARTFLHYLYTADTGLPPGLSSELSSLAHRFGVSELVHLCEQVPIATDSE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 GLY n 1 25 ARG n 1 26 THR n 1 27 LEU n 1 28 LEU n 1 29 SER n 1 30 LEU n 1 31 GLY n 1 32 LEU n 1 33 LEU n 1 34 VAL n 1 35 ALA n 1 36 ASP n 1 37 PHE n 1 38 GLY n 1 39 ALA n 1 40 MET n 1 41 VAL n 1 42 ASN n 1 43 ASN n 1 44 PRO n 1 45 HIS n 1 46 LEU n 1 47 SER n 1 48 ASP n 1 49 VAL n 1 50 GLN n 1 51 PHE n 1 52 GLN n 1 53 THR n 1 54 ASP n 1 55 SER n 1 56 GLY n 1 57 GLU n 1 58 VAL n 1 59 LEU n 1 60 TYR n 1 61 ALA n 1 62 HIS n 1 63 LYS n 1 64 PHE n 1 65 VAL n 1 66 LEU n 1 67 TYR n 1 68 ALA n 1 69 ARG n 1 70 CYS n 1 71 PRO n 1 72 LEU n 1 73 LEU n 1 74 ILE n 1 75 GLN n 1 76 TYR n 1 77 VAL n 1 78 ASN n 1 79 ASN n 1 80 GLU n 1 81 GLY n 1 82 PHE n 1 83 SER n 1 84 ALA n 1 85 ILE n 1 86 GLU n 1 87 ASP n 1 88 GLY n 1 89 VAL n 1 90 GLU n 1 91 THR n 1 92 GLN n 1 93 ARG n 1 94 VAL n 1 95 LEU n 1 96 LEU n 1 97 GLY n 1 98 ASP n 1 99 VAL n 1 100 SER n 1 101 THR n 1 102 GLU n 1 103 ALA n 1 104 ALA n 1 105 ARG n 1 106 THR n 1 107 PHE n 1 108 LEU n 1 109 HIS n 1 110 TYR n 1 111 LEU n 1 112 TYR n 1 113 THR n 1 114 ALA n 1 115 ASP n 1 116 THR n 1 117 GLY n 1 118 LEU n 1 119 PRO n 1 120 PRO n 1 121 GLY n 1 122 LEU n 1 123 SER n 1 124 SER n 1 125 GLU n 1 126 LEU n 1 127 SER n 1 128 SER n 1 129 LEU n 1 130 ALA n 1 131 HIS n 1 132 ARG n 1 133 PHE n 1 134 GLY n 1 135 VAL n 1 136 SER n 1 137 GLU n 1 138 LEU n 1 139 VAL n 1 140 HIS n 1 141 LEU n 1 142 CYS n 1 143 GLU n 1 144 GLN n 1 145 VAL n 1 146 PRO n 1 147 ILE n 1 148 ALA n 1 149 THR n 1 150 ASP n 1 151 SER n 1 152 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SLX4_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q8IY92 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4UYI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 152 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8IY92 _struct_ref_seq.db_align_beg 668 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 796 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 668 _struct_ref_seq.pdbx_auth_seq_align_end 796 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4UYI MET A 1 ? UNP Q8IY92 ? ? 'expression tag' 645 1 1 4UYI HIS A 2 ? UNP Q8IY92 ? ? 'expression tag' 646 2 1 4UYI HIS A 3 ? UNP Q8IY92 ? ? 'expression tag' 647 3 1 4UYI HIS A 4 ? UNP Q8IY92 ? ? 'expression tag' 648 4 1 4UYI HIS A 5 ? UNP Q8IY92 ? ? 'expression tag' 649 5 1 4UYI HIS A 6 ? UNP Q8IY92 ? ? 'expression tag' 650 6 1 4UYI HIS A 7 ? UNP Q8IY92 ? ? 'expression tag' 651 7 1 4UYI SER A 8 ? UNP Q8IY92 ? ? 'expression tag' 652 8 1 4UYI SER A 9 ? UNP Q8IY92 ? ? 'expression tag' 653 9 1 4UYI GLY A 10 ? UNP Q8IY92 ? ? 'expression tag' 654 10 1 4UYI VAL A 11 ? UNP Q8IY92 ? ? 'expression tag' 655 11 1 4UYI ASP A 12 ? UNP Q8IY92 ? ? 'expression tag' 656 12 1 4UYI LEU A 13 ? UNP Q8IY92 ? ? 'expression tag' 657 13 1 4UYI GLY A 14 ? UNP Q8IY92 ? ? 'expression tag' 658 14 1 4UYI THR A 15 ? UNP Q8IY92 ? ? 'expression tag' 659 15 1 4UYI GLU A 16 ? UNP Q8IY92 ? ? 'expression tag' 660 16 1 4UYI ASN A 17 ? UNP Q8IY92 ? ? 'expression tag' 661 17 1 4UYI LEU A 18 ? UNP Q8IY92 ? ? 'expression tag' 662 18 1 4UYI TYR A 19 ? UNP Q8IY92 ? ? 'expression tag' 663 19 1 4UYI PHE A 20 ? UNP Q8IY92 ? ? 'expression tag' 664 20 1 4UYI GLN A 21 ? UNP Q8IY92 ? ? 'expression tag' 665 21 1 4UYI SER A 22 ? UNP Q8IY92 ? ? 'expression tag' 666 22 1 4UYI MET A 23 ? UNP Q8IY92 ? ? 'expression tag' 667 23 1 4UYI ILE A 85 ? UNP Q8IY92 VAL 729 'engineered mutation' 729 24 1 4UYI GLU A 90 ? UNP Q8IY92 LEU 734 'engineered mutation' 734 25 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4UYI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.5 _exptl_crystal.density_percent_sol 65 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2M MAGNESIUM CHLORIDE, 25% PEG3350, 0.1M BIS-TRIS PH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2014-08-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.97625 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4UYI _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 71.25 _reflns.d_resolution_high 1.86 _reflns.number_obs 16697 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.10 _reflns.B_iso_Wilson_estimate 30.75 _reflns.pdbx_redundancy 12.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.86 _reflns_shell.d_res_low 1.91 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.71 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.80 _reflns_shell.pdbx_redundancy 12.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4UYI _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16697 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 71.245 _refine.ls_d_res_high 1.860 _refine.ls_percent_reflns_obs 99.96 _refine.ls_R_factor_obs 0.1804 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1796 _refine.ls_R_factor_R_free 0.1944 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 835 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.15 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 22.57 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 978 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1071 _refine_hist.d_res_high 1.860 _refine_hist.d_res_low 71.245 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.011 ? ? 999 'X-RAY DIFFRACTION' ? f_angle_d 1.171 ? ? 1359 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 14.418 ? ? 348 'X-RAY DIFFRACTION' ? f_chiral_restr 0.044 ? ? 158 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 175 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.8600 1.9765 2633 0.2340 100.00 0.2890 . . 132 . . 'X-RAY DIFFRACTION' . 1.9765 2.1292 2612 0.2009 100.00 0.2380 . . 144 . . 'X-RAY DIFFRACTION' . 2.1292 2.3434 2640 0.1827 100.00 0.2207 . . 128 . . 'X-RAY DIFFRACTION' . 2.3434 2.6826 2641 0.1821 100.00 0.2294 . . 135 . . 'X-RAY DIFFRACTION' . 2.6826 3.3797 2619 0.1902 100.00 0.1980 . . 160 . . 'X-RAY DIFFRACTION' . 3.3797 71.2973 2717 0.1641 100.00 0.1610 . . 136 . . # _struct.entry_id 4UYI _struct.title 'Crystal structure of the BTB domain of human SLX4 (BTBD12)' _struct.pdbx_descriptor 'STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4UYI _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 18 ? ALA A 39 ? LEU A 662 ALA A 683 1 ? 22 HELX_P HELX_P2 2 HIS A 62 ? CYS A 70 ? HIS A 706 CYS A 714 1 ? 9 HELX_P HELX_P3 3 CYS A 70 ? GLY A 81 ? CYS A 714 GLY A 725 1 ? 12 HELX_P HELX_P4 4 SER A 100 ? ALA A 114 ? SER A 744 ALA A 758 1 ? 15 HELX_P HELX_P5 5 PRO A 119 ? GLY A 121 ? PRO A 763 GLY A 765 5 ? 3 HELX_P HELX_P6 6 LEU A 122 ? PHE A 133 ? LEU A 766 PHE A 777 1 ? 12 HELX_P HELX_P7 7 VAL A 135 ? GLN A 144 ? VAL A 779 GLN A 788 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 58 ? ALA A 61 ? VAL A 702 ALA A 705 AA 2 VAL A 49 ? GLN A 52 ? VAL A 693 GLN A 696 AA 3 VAL A 89 ? LEU A 95 ? VAL A 733 LEU A 739 AA 4 PHE A 82 ? GLU A 86 ? PHE A 726 GLU A 730 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ALA A 61 ? N ALA A 705 O VAL A 49 ? O VAL A 693 AA 2 3 N GLN A 50 ? N GLN A 694 O GLN A 92 ? O GLN A 736 AA 3 4 N ARG A 93 ? N ARG A 737 O PHE A 82 ? O PHE A 726 # _database_PDB_matrix.entry_id 4UYI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4UYI _atom_sites.fract_transf_matrix[1][1] 0.007018 _atom_sites.fract_transf_matrix[1][2] 0.004052 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008104 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019635 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 645 ? ? ? A . n A 1 2 HIS 2 646 ? ? ? A . n A 1 3 HIS 3 647 ? ? ? A . n A 1 4 HIS 4 648 ? ? ? A . n A 1 5 HIS 5 649 ? ? ? A . n A 1 6 HIS 6 650 ? ? ? A . n A 1 7 HIS 7 651 ? ? ? A . n A 1 8 SER 8 652 ? ? ? A . n A 1 9 SER 9 653 ? ? ? A . n A 1 10 GLY 10 654 ? ? ? A . n A 1 11 VAL 11 655 ? ? ? A . n A 1 12 ASP 12 656 ? ? ? A . n A 1 13 LEU 13 657 ? ? ? A . n A 1 14 GLY 14 658 ? ? ? A . n A 1 15 THR 15 659 ? ? ? A . n A 1 16 GLU 16 660 ? ? ? A . n A 1 17 ASN 17 661 ? ? ? A . n A 1 18 LEU 18 662 662 LEU LEU A . n A 1 19 TYR 19 663 663 TYR TYR A . n A 1 20 PHE 20 664 664 PHE PHE A . n A 1 21 GLN 21 665 665 GLN GLN A . n A 1 22 SER 22 666 666 SER SER A . n A 1 23 MET 23 667 667 MET MET A . n A 1 24 GLY 24 668 668 GLY GLY A . n A 1 25 ARG 25 669 669 ARG ARG A . n A 1 26 THR 26 670 670 THR THR A . n A 1 27 LEU 27 671 671 LEU LEU A . n A 1 28 LEU 28 672 672 LEU LEU A . n A 1 29 SER 29 673 673 SER SER A . n A 1 30 LEU 30 674 674 LEU LEU A . n A 1 31 GLY 31 675 675 GLY GLY A . n A 1 32 LEU 32 676 676 LEU LEU A . n A 1 33 LEU 33 677 677 LEU LEU A . n A 1 34 VAL 34 678 678 VAL VAL A . n A 1 35 ALA 35 679 679 ALA ALA A . n A 1 36 ASP 36 680 680 ASP ASP A . n A 1 37 PHE 37 681 681 PHE PHE A . n A 1 38 GLY 38 682 682 GLY GLY A . n A 1 39 ALA 39 683 683 ALA ALA A . n A 1 40 MET 40 684 684 MET MET A . n A 1 41 VAL 41 685 685 VAL VAL A . n A 1 42 ASN 42 686 686 ASN ASN A . n A 1 43 ASN 43 687 687 ASN ASN A . n A 1 44 PRO 44 688 688 PRO PRO A . n A 1 45 HIS 45 689 689 HIS HIS A . n A 1 46 LEU 46 690 690 LEU LEU A . n A 1 47 SER 47 691 691 SER SER A . n A 1 48 ASP 48 692 692 ASP ASP A . n A 1 49 VAL 49 693 693 VAL VAL A . n A 1 50 GLN 50 694 694 GLN GLN A . n A 1 51 PHE 51 695 695 PHE PHE A . n A 1 52 GLN 52 696 696 GLN GLN A . n A 1 53 THR 53 697 697 THR THR A . n A 1 54 ASP 54 698 698 ASP ASP A . n A 1 55 SER 55 699 699 SER SER A . n A 1 56 GLY 56 700 700 GLY GLY A . n A 1 57 GLU 57 701 701 GLU GLU A . n A 1 58 VAL 58 702 702 VAL VAL A . n A 1 59 LEU 59 703 703 LEU LEU A . n A 1 60 TYR 60 704 704 TYR TYR A . n A 1 61 ALA 61 705 705 ALA ALA A . n A 1 62 HIS 62 706 706 HIS HIS A . n A 1 63 LYS 63 707 707 LYS LYS A . n A 1 64 PHE 64 708 708 PHE PHE A . n A 1 65 VAL 65 709 709 VAL VAL A . n A 1 66 LEU 66 710 710 LEU LEU A . n A 1 67 TYR 67 711 711 TYR TYR A . n A 1 68 ALA 68 712 712 ALA ALA A . n A 1 69 ARG 69 713 713 ARG ARG A . n A 1 70 CYS 70 714 714 CYS CYS A . n A 1 71 PRO 71 715 715 PRO PRO A . n A 1 72 LEU 72 716 716 LEU LEU A . n A 1 73 LEU 73 717 717 LEU LEU A . n A 1 74 ILE 74 718 718 ILE ILE A . n A 1 75 GLN 75 719 719 GLN GLN A . n A 1 76 TYR 76 720 720 TYR TYR A . n A 1 77 VAL 77 721 721 VAL VAL A . n A 1 78 ASN 78 722 722 ASN ASN A . n A 1 79 ASN 79 723 723 ASN ASN A . n A 1 80 GLU 80 724 724 GLU GLU A . n A 1 81 GLY 81 725 725 GLY GLY A . n A 1 82 PHE 82 726 726 PHE PHE A . n A 1 83 SER 83 727 727 SER SER A . n A 1 84 ALA 84 728 728 ALA ALA A . n A 1 85 ILE 85 729 729 ILE ILE A . n A 1 86 GLU 86 730 730 GLU GLU A . n A 1 87 ASP 87 731 731 ASP ASP A . n A 1 88 GLY 88 732 732 GLY GLY A . n A 1 89 VAL 89 733 733 VAL VAL A . n A 1 90 GLU 90 734 734 GLU GLU A . n A 1 91 THR 91 735 735 THR THR A . n A 1 92 GLN 92 736 736 GLN GLN A . n A 1 93 ARG 93 737 737 ARG ARG A . n A 1 94 VAL 94 738 738 VAL VAL A . n A 1 95 LEU 95 739 739 LEU LEU A . n A 1 96 LEU 96 740 740 LEU LEU A . n A 1 97 GLY 97 741 741 GLY GLY A . n A 1 98 ASP 98 742 742 ASP ASP A . n A 1 99 VAL 99 743 743 VAL VAL A . n A 1 100 SER 100 744 744 SER SER A . n A 1 101 THR 101 745 745 THR THR A . n A 1 102 GLU 102 746 746 GLU GLU A . n A 1 103 ALA 103 747 747 ALA ALA A . n A 1 104 ALA 104 748 748 ALA ALA A . n A 1 105 ARG 105 749 749 ARG ARG A . n A 1 106 THR 106 750 750 THR THR A . n A 1 107 PHE 107 751 751 PHE PHE A . n A 1 108 LEU 108 752 752 LEU LEU A . n A 1 109 HIS 109 753 753 HIS HIS A . n A 1 110 TYR 110 754 754 TYR TYR A . n A 1 111 LEU 111 755 755 LEU LEU A . n A 1 112 TYR 112 756 756 TYR TYR A . n A 1 113 THR 113 757 757 THR THR A . n A 1 114 ALA 114 758 758 ALA ALA A . n A 1 115 ASP 115 759 759 ASP ASP A . n A 1 116 THR 116 760 760 THR THR A . n A 1 117 GLY 117 761 761 GLY GLY A . n A 1 118 LEU 118 762 762 LEU LEU A . n A 1 119 PRO 119 763 763 PRO PRO A . n A 1 120 PRO 120 764 764 PRO PRO A . n A 1 121 GLY 121 765 765 GLY GLY A . n A 1 122 LEU 122 766 766 LEU LEU A . n A 1 123 SER 123 767 767 SER SER A . n A 1 124 SER 124 768 768 SER SER A . n A 1 125 GLU 125 769 769 GLU GLU A . n A 1 126 LEU 126 770 770 LEU LEU A . n A 1 127 SER 127 771 771 SER SER A . n A 1 128 SER 128 772 772 SER SER A . n A 1 129 LEU 129 773 773 LEU LEU A . n A 1 130 ALA 130 774 774 ALA ALA A . n A 1 131 HIS 131 775 775 HIS HIS A . n A 1 132 ARG 132 776 776 ARG ARG A . n A 1 133 PHE 133 777 777 PHE PHE A . n A 1 134 GLY 134 778 778 GLY GLY A . n A 1 135 VAL 135 779 779 VAL VAL A . n A 1 136 SER 136 780 780 SER SER A . n A 1 137 GLU 137 781 781 GLU GLU A . n A 1 138 LEU 138 782 782 LEU LEU A . n A 1 139 VAL 139 783 783 VAL VAL A . n A 1 140 HIS 140 784 784 HIS HIS A . n A 1 141 LEU 141 785 785 LEU LEU A . n A 1 142 CYS 142 786 786 CYS CYS A . n A 1 143 GLU 143 787 787 GLU GLU A . n A 1 144 GLN 144 788 788 GLN GLN A . n A 1 145 VAL 145 789 ? ? ? A . n A 1 146 PRO 146 790 ? ? ? A . n A 1 147 ILE 147 791 ? ? ? A . n A 1 148 ALA 148 792 ? ? ? A . n A 1 149 THR 149 793 ? ? ? A . n A 1 150 ASP 150 794 ? ? ? A . n A 1 151 SER 151 795 ? ? ? A . n A 1 152 GLU 152 796 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . B 2 HOH 38 2038 2038 HOH HOH A . B 2 HOH 39 2039 2039 HOH HOH A . B 2 HOH 40 2040 2040 HOH HOH A . B 2 HOH 41 2041 2041 HOH HOH A . B 2 HOH 42 2042 2042 HOH HOH A . B 2 HOH 43 2043 2043 HOH HOH A . B 2 HOH 44 2044 2044 HOH HOH A . B 2 HOH 45 2045 2045 HOH HOH A . B 2 HOH 46 2046 2046 HOH HOH A . B 2 HOH 47 2047 2047 HOH HOH A . B 2 HOH 48 2048 2048 HOH HOH A . B 2 HOH 49 2049 2049 HOH HOH A . B 2 HOH 50 2050 2050 HOH HOH A . B 2 HOH 51 2051 2051 HOH HOH A . B 2 HOH 52 2052 2052 HOH HOH A . B 2 HOH 53 2053 2053 HOH HOH A . B 2 HOH 54 2054 2054 HOH HOH A . B 2 HOH 55 2055 2055 HOH HOH A . B 2 HOH 56 2056 2056 HOH HOH A . B 2 HOH 57 2057 2057 HOH HOH A . B 2 HOH 58 2058 2058 HOH HOH A . B 2 HOH 59 2059 2059 HOH HOH A . B 2 HOH 60 2060 2060 HOH HOH A . B 2 HOH 61 2061 2061 HOH HOH A . B 2 HOH 62 2062 2062 HOH HOH A . B 2 HOH 63 2063 2063 HOH HOH A . B 2 HOH 64 2064 2064 HOH HOH A . B 2 HOH 65 2065 2065 HOH HOH A . B 2 HOH 66 2066 2066 HOH HOH A . B 2 HOH 67 2067 2067 HOH HOH A . B 2 HOH 68 2068 2068 HOH HOH A . B 2 HOH 69 2069 2069 HOH HOH A . B 2 HOH 70 2070 2070 HOH HOH A . B 2 HOH 71 2071 2071 HOH HOH A . B 2 HOH 72 2072 2072 HOH HOH A . B 2 HOH 73 2073 2073 HOH HOH A . B 2 HOH 74 2074 2074 HOH HOH A . B 2 HOH 75 2075 2075 HOH HOH A . B 2 HOH 76 2076 2076 HOH HOH A . B 2 HOH 77 2077 2077 HOH HOH A . B 2 HOH 78 2078 2078 HOH HOH A . B 2 HOH 79 2079 2079 HOH HOH A . B 2 HOH 80 2080 2080 HOH HOH A . B 2 HOH 81 2081 2081 HOH HOH A . B 2 HOH 82 2082 2082 HOH HOH A . B 2 HOH 83 2083 2083 HOH HOH A . B 2 HOH 84 2084 2084 HOH HOH A . B 2 HOH 85 2085 2085 HOH HOH A . B 2 HOH 86 2086 2086 HOH HOH A . B 2 HOH 87 2087 2087 HOH HOH A . B 2 HOH 88 2088 2088 HOH HOH A . B 2 HOH 89 2089 2089 HOH HOH A . B 2 HOH 90 2090 2090 HOH HOH A . B 2 HOH 91 2091 2091 HOH HOH A . B 2 HOH 92 2092 2092 HOH HOH A . B 2 HOH 93 2093 2093 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13260 ? 1 MORE -123.3 ? 1 'SSA (A^2)' 32280 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 71.2450000000 -0.8660254038 0.5000000000 0.0000000000 41.1333199284 0.0000000000 0.0000000000 -1.0000000000 16.9766666667 3 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 71.2450000000 0.8660254038 -0.5000000000 0.0000000000 123.3999597852 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -71.2450000000 -0.8660254038 -0.5000000000 0.0000000000 123.3999597852 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 10_455 y-1/3,x+1/3,-z+1/3 -0.5000000000 0.8660254038 0.0000000000 -71.2450000000 0.8660254038 0.5000000000 0.0000000000 41.1333199284 0.0000000000 0.0000000000 -1.0000000000 16.9766666667 6 'crystal symmetry operation' 11_565 x-y+2/3,-y+4/3,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 164.5332797137 0.0000000000 0.0000000000 -1.0000000000 16.9766666667 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 2015 ? B HOH . 2 1 A HOH 2016 ? B HOH . 3 1 A HOH 2045 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-10-01 2 'Structure model' 1 1 2014-10-15 3 'Structure model' 1 2 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' audit_author 2 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_audit_author.name' 2 3 'Structure model' '_citation_author.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 MR-Rosetta phasing . ? 4 # _pdbx_entry_details.entry_id 4UYI _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;ENGINEERED CRYSTALLIZATION EPITOPE MUTATIONS V729I AND L734E ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2011 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2062 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 690 ? ? 58.91 16.41 2 1 CYS A 714 ? ? -156.47 82.17 3 1 ALA A 758 ? ? 59.28 16.73 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 746 ? CG ? A GLU 102 CG 2 1 Y 1 A GLU 746 ? CD ? A GLU 102 CD 3 1 Y 1 A GLU 746 ? OE1 ? A GLU 102 OE1 4 1 Y 1 A GLU 746 ? OE2 ? A GLU 102 OE2 5 1 Y 1 A GLN 788 ? CG ? A GLN 144 CG 6 1 Y 1 A GLN 788 ? CD ? A GLN 144 CD 7 1 Y 1 A GLN 788 ? OE1 ? A GLN 144 OE1 8 1 Y 1 A GLN 788 ? NE2 ? A GLN 144 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 645 ? A MET 1 2 1 Y 1 A HIS 646 ? A HIS 2 3 1 Y 1 A HIS 647 ? A HIS 3 4 1 Y 1 A HIS 648 ? A HIS 4 5 1 Y 1 A HIS 649 ? A HIS 5 6 1 Y 1 A HIS 650 ? A HIS 6 7 1 Y 1 A HIS 651 ? A HIS 7 8 1 Y 1 A SER 652 ? A SER 8 9 1 Y 1 A SER 653 ? A SER 9 10 1 Y 1 A GLY 654 ? A GLY 10 11 1 Y 1 A VAL 655 ? A VAL 11 12 1 Y 1 A ASP 656 ? A ASP 12 13 1 Y 1 A LEU 657 ? A LEU 13 14 1 Y 1 A GLY 658 ? A GLY 14 15 1 Y 1 A THR 659 ? A THR 15 16 1 Y 1 A GLU 660 ? A GLU 16 17 1 Y 1 A ASN 661 ? A ASN 17 18 1 Y 1 A VAL 789 ? A VAL 145 19 1 Y 1 A PRO 790 ? A PRO 146 20 1 Y 1 A ILE 791 ? A ILE 147 21 1 Y 1 A ALA 792 ? A ALA 148 22 1 Y 1 A THR 793 ? A THR 149 23 1 Y 1 A ASP 794 ? A ASP 150 24 1 Y 1 A SER 795 ? A SER 151 25 1 Y 1 A GLU 796 ? A GLU 152 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #