HEADER STRUCTURAL PROTEIN 05-SEP-14 4UZG TITLE CRYSTAL STRUCTURE OF GROUP B STREPTOCOCCUS PILUS 2B BACKBONE PROTEIN TITLE 2 SAK_1440 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SURFACE PROTEIN SPB1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GROUP B STREPTOCOCCUS PILUS 2B BACKBONE PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: ISOPEPTIDE BONDS BETWEEN RESIDUES ASN 330 AND LYS 187, COMPND 7 AND BETWEEN ASN 462 AND LYS 358 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE A909; SOURCE 3 ORGANISM_TAXID: 205921; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: T1R KEYWDS STRUCTURAL PROTEIN, PILI, SORTASES, ISOPEPTIDE BOND EXPDTA X-RAY DIFFRACTION AUTHOR E.MALITO,R.COZZI,M.J.BOTTOMLEY REVDAT 5 10-JAN-24 4UZG 1 REMARK LINK REVDAT 4 30-OCT-19 4UZG 1 REMARK LINK REVDAT 3 23-OCT-19 4UZG 1 LINK ATOM REVDAT 2 09-AUG-17 4UZG 1 JRNL REVDAT 1 13-MAY-15 4UZG 0 JRNL AUTH R.COZZI,E.MALITO,M.LAZZARIN,A.NUCCITELLI,A.CASTAGNETTI, JRNL AUTH 2 M.J.BOTTOMLEY,I.MARGARIT,D.MAIONE,C.D.RINAUDO JRNL TITL STRUCTURE AND ASSEMBLY OF GROUP B STREPTOCOCCUS PILUS 2B JRNL TITL 2 BACKBONE PROTEIN. JRNL REF PLOS ONE V. 10 25875 2015 JRNL REFN ESSN 1932-6203 JRNL PMID 25942637 JRNL DOI 10.1371/JOURNAL.PONE.0125875 REMARK 2 REMARK 2 RESOLUTION. 1.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.3 REMARK 3 NUMBER OF REFLECTIONS : 119340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.126 REMARK 3 R VALUE (WORKING SET) : 0.125 REMARK 3 FREE R VALUE : 0.142 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 9674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6814 - 3.2936 1.00 7809 438 0.1433 0.1647 REMARK 3 2 3.2936 - 2.6142 1.00 7818 405 0.1394 0.1432 REMARK 3 3 2.6142 - 2.2838 1.00 7839 376 0.1267 0.1352 REMARK 3 4 2.2838 - 2.0750 0.99 7792 382 0.1133 0.1275 REMARK 3 5 2.0750 - 1.9263 0.88 6897 353 0.1078 0.1217 REMARK 3 6 1.9263 - 1.8127 0.79 6188 312 0.1115 0.1236 REMARK 3 7 1.8127 - 1.7219 0.79 6153 364 0.1135 0.1234 REMARK 3 8 1.7219 - 1.6469 0.78 6136 319 0.1071 0.1200 REMARK 3 9 1.6469 - 1.5835 0.79 6167 329 0.1051 0.1233 REMARK 3 10 1.5835 - 1.5289 0.78 6122 278 0.0988 0.1129 REMARK 3 11 1.5289 - 1.4811 0.78 6071 321 0.1007 0.1245 REMARK 3 12 1.4811 - 1.4387 0.77 6078 311 0.1018 0.1338 REMARK 3 13 1.4387 - 1.4009 0.77 6002 290 0.1046 0.1361 REMARK 3 14 1.4009 - 1.3667 0.77 6028 340 0.1070 0.1385 REMARK 3 15 1.3667 - 1.3356 0.76 5905 350 0.1069 0.1375 REMARK 3 16 1.3356 - 1.3072 0.76 5950 275 0.1104 0.1316 REMARK 3 17 1.3072 - 1.2810 0.75 5902 296 0.1128 0.1334 REMARK 3 18 1.2810 - 1.2569 0.75 5888 286 0.1122 0.1418 REMARK 3 19 1.2569 - 1.2344 0.75 5872 333 0.1188 0.1547 REMARK 3 20 1.2344 - 1.2135 0.74 5767 332 0.1227 0.1423 REMARK 3 21 1.2135 - 1.1939 0.74 5765 316 0.1259 0.1513 REMARK 3 22 1.1939 - 1.1755 0.73 5781 297 0.1247 0.1498 REMARK 3 23 1.1755 - 1.1582 0.73 5695 322 0.1289 0.1597 REMARK 3 24 1.1582 - 1.1419 0.73 5726 293 0.1360 0.1562 REMARK 3 25 1.1419 - 1.1265 0.72 5660 303 0.1399 0.1444 REMARK 3 26 1.1265 - 1.1119 0.72 5606 295 0.1494 0.1594 REMARK 3 27 1.1119 - 1.0980 0.72 5584 309 0.1625 0.1714 REMARK 3 28 1.0980 - 1.0847 0.71 5568 292 0.1719 0.2203 REMARK 3 29 1.0847 - 1.0721 0.71 5520 307 0.1870 0.1861 REMARK 3 30 1.0721 - 1.0601 0.58 4491 250 0.2077 0.2530 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.070 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2210 REMARK 3 ANGLE : 1.416 3025 REMARK 3 CHIRALITY : 0.082 361 REMARK 3 PLANARITY : 0.008 394 REMARK 3 DIHEDRAL : 12.396 807 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4UZG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1290061702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9393 REMARK 200 MONOCHROMATOR : DIAMOND (001) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 119342 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.060 REMARK 200 RESOLUTION RANGE LOW (A) : 47.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.03400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.06 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.2 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRIES 3ICH, 3QDH, 2H9G REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE, 20% PEG 3350, PH REMARK 280 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.96000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 184 REMARK 465 THR A 287 REMARK 465 GLY A 288 REMARK 465 ASN A 289 REMARK 465 THR A 290 REMARK 465 GLN A 291 REMARK 465 ASN A 292 REMARK 465 GLY A 293 REMARK 465 ALA A 294 REMARK 465 ASN A 295 REMARK 465 HIS A 471 REMARK 465 HIS A 472 REMARK 465 HIS A 473 REMARK 465 HIS A 474 REMARK 465 HIS A 475 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 330 ND2 REMARK 470 ASN A 462 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS A 187 CG ASN A 330 0.78 REMARK 500 NZ LYS A 358 CG ASN A 462 1.32 REMARK 500 NZ LYS A 187 CG ASN A 330 1.43 REMARK 500 HD21 ASN A 208 O HOH A 2045 1.52 REMARK 500 HZ2 LYS A 187 CG ASN A 330 1.54 REMARK 500 O HOH A 2237 O HOH A 2238 1.63 REMARK 500 O HOH A 2242 O HOH A 2243 1.66 REMARK 500 O HOH A 2219 O HOH A 2220 1.82 REMARK 500 O HOH A 2109 O HOH A 2110 1.85 REMARK 500 OE1 GLU A 461 O HOH A 2482 1.87 REMARK 500 O HOH A 2246 O HOH A 2289 1.89 REMARK 500 O HOH A 2127 O HOH A 2134 1.89 REMARK 500 O HOH A 2132 O HOH A 2185 1.92 REMARK 500 O HOH A 2446 O HOH A 2447 1.93 REMARK 500 O HOH A 2402 O HOH A 2405 1.93 REMARK 500 ND2 ASN A 208 O HOH A 2045 1.95 REMARK 500 O HOH A 2108 O HOH A 2110 1.96 REMARK 500 O HOH A 2258 O HOH A 2429 1.97 REMARK 500 O HOH A 2482 O HOH A 2483 1.99 REMARK 500 O HOH A 2283 O HOH A 2383 2.01 REMARK 500 O HOH A 2327 O HOH A 2329 2.02 REMARK 500 O HOH A 2228 O HOH A 2229 2.03 REMARK 500 OE2 GLU A 467 O HOH A 2491 2.04 REMARK 500 O HOH A 2112 O HOH A 2233 2.05 REMARK 500 O HOH A 2306 O HOH A 2441 2.05 REMARK 500 O HOH A 2290 O HOH A 2314 2.05 REMARK 500 N GLY A 185 O HOH A 2002 2.06 REMARK 500 O HOH A 2191 O HOH A 2195 2.06 REMARK 500 O HOH A 2202 O HOH A 2208 2.06 REMARK 500 O HOH A 2112 O HOH A 2113 2.09 REMARK 500 O HOH A 2016 O HOH A 2114 2.16 REMARK 500 OE1 GLU A 241 O HOH A 2098 2.17 REMARK 500 O HOH A 2229 O HOH A 2236 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2244 O HOH A 2386 1655 1.79 REMARK 500 O HOH A 2187 O HOH A 2487 1654 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 228 171.03 -59.69 REMARK 500 ASN A 337 -125.47 49.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2137 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A2261 DISTANCE = 5.88 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1473 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 234 OD1 REMARK 620 2 LEU A 235 O 79.7 REMARK 620 3 GLU A 237 OE1 144.8 75.0 REMARK 620 4 ASN A 250 OD1 114.0 34.5 47.0 REMARK 620 5 ILE A 251 O 115.6 36.2 45.9 1.7 REMARK 620 6 HOH A2085 O 118.7 39.0 41.6 5.4 4.3 REMARK 620 7 HOH A2086 O 119.5 41.0 46.0 7.7 6.3 8.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1475 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 340 OD1 REMARK 620 2 ASP A 341 OD1 94.3 REMARK 620 3 GLU A 391 OE1 26.8 80.2 REMARK 620 4 HOH A2301 O 75.0 71.8 92.1 REMARK 620 5 HOH A2303 O 91.2 135.4 117.2 67.1 REMARK 620 6 HOH A2380 O 88.9 73.5 63.2 140.2 150.9 REMARK 620 7 HOH A2381 O 84.4 152.3 86.9 133.6 72.3 78.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1474 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 389 OD1 REMARK 620 2 VAL A 390 O 78.2 REMARK 620 3 GLU A 391 OE2 90.3 85.5 REMARK 620 4 HOH A2022 O 83.3 81.6 166.6 REMARK 620 5 HOH A2025 O 125.4 140.9 120.8 72.3 REMARK 620 6 HOH A2377 O 76.6 148.0 75.3 114.4 70.9 REMARK 620 7 HOH A2379 O 160.5 84.3 79.8 102.6 73.9 116.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1471 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1472 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1473 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1474 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1475 DBREF 4UZG A 185 470 UNP Q3K0A5 Q3K0A5_STRA1 185 470 SEQADV 4UZG MET A 184 UNP Q3K0A5 EXPRESSION TAG SEQADV 4UZG HIS A 471 UNP Q3K0A5 EXPRESSION TAG SEQADV 4UZG HIS A 472 UNP Q3K0A5 EXPRESSION TAG SEQADV 4UZG HIS A 473 UNP Q3K0A5 EXPRESSION TAG SEQADV 4UZG HIS A 474 UNP Q3K0A5 EXPRESSION TAG SEQADV 4UZG HIS A 475 UNP Q3K0A5 EXPRESSION TAG SEQRES 1 A 292 MET GLY GLY LYS THR VAL ASP GLN LYS THR TYR SER VAL SEQRES 2 A 292 GLY ASP THR VAL LYS TYR THR ILE THR TYR LYS ASN ALA SEQRES 3 A 292 VAL ASN TYR HIS GLY THR GLU LYS VAL TYR GLN TYR VAL SEQRES 4 A 292 ILE LYS ASP THR MET PRO SER ALA SER VAL VAL ASP LEU SEQRES 5 A 292 ASN GLU GLY SER TYR GLU VAL THR ILE THR ASP GLY SER SEQRES 6 A 292 GLY ASN ILE THR THR LEU THR GLN GLY SER GLU LYS ALA SEQRES 7 A 292 THR GLY LYS TYR ASN LEU LEU GLU GLU ASN ASN ASN PHE SEQRES 8 A 292 THR ILE THR ILE PRO TRP ALA ALA THR ASN THR PRO THR SEQRES 9 A 292 GLY ASN THR GLN ASN GLY ALA ASN ASP ASP PHE PHE TYR SEQRES 10 A 292 LYS GLY ILE ASN THR ILE THR VAL THR TYR THR GLY VAL SEQRES 11 A 292 LEU LYS SER GLY ALA LYS PRO GLY SER ALA ASP LEU PRO SEQRES 12 A 292 GLU ASN THR ASN ILE ALA THR ILE ASN PRO ASN THR SER SEQRES 13 A 292 ASN ASP ASP PRO GLY GLN LYS VAL THR VAL ARG ASP GLY SEQRES 14 A 292 GLN ILE THR ILE LYS LYS ILE ASP GLY SER THR LYS ALA SEQRES 15 A 292 SER LEU GLN GLY ALA ILE PHE VAL LEU LYS ASN ALA THR SEQRES 16 A 292 GLY GLN PHE LEU ASN PHE ASN ASP THR ASN ASN VAL GLU SEQRES 17 A 292 TRP GLY THR GLU ALA ASN ALA THR GLU TYR THR THR GLY SEQRES 18 A 292 ALA ASP GLY ILE ILE THR ILE THR GLY LEU LYS GLU GLY SEQRES 19 A 292 THR TYR TYR LEU VAL GLU LYS LYS ALA PRO LEU GLY TYR SEQRES 20 A 292 ASN LEU LEU ASP ASN SER GLN LYS VAL ILE LEU GLY ASP SEQRES 21 A 292 GLY ALA THR ASP THR THR ASN SER ASP ASN LEU LEU VAL SEQRES 22 A 292 ASN PRO THR VAL GLU ASN ASN LYS GLY THR GLU LEU PRO SEQRES 23 A 292 SER HIS HIS HIS HIS HIS HET EDO A1471 10 HET EDO A1472 10 HET CA A1473 1 HET CA A1474 1 HET CA A1475 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 CA 3(CA 2+) FORMUL 7 HOH *494(H2 O) HELIX 1 1 LEU A 325 GLU A 327 5 3 SHEET 1 AA 5 LYS A 187 VAL A 189 0 SHEET 2 AA 5 THR A 199 ALA A 209 -1 O THR A 203 N THR A 188 SHEET 3 AA 5 ASN A 304 LEU A 314 -1 O ASN A 304 N ALA A 209 SHEET 4 AA 5 GLU A 241 THR A 245 -1 O GLU A 241 N THR A 309 SHEET 5 AA 5 ILE A 251 THR A 253 -1 O THR A 252 N ILE A 244 SHEET 1 AB 4 LYS A 187 VAL A 189 0 SHEET 2 AB 4 THR A 199 ALA A 209 -1 O THR A 203 N THR A 188 SHEET 3 AB 4 ASN A 304 LEU A 314 -1 O ASN A 304 N ALA A 209 SHEET 4 AB 4 VAL A 233 LEU A 235 -1 O ASP A 234 N VAL A 313 SHEET 1 AC 2 TYR A 212 HIS A 213 0 SHEET 2 AC 2 GLU A 216 LYS A 217 -1 O GLU A 216 N HIS A 213 SHEET 1 AD 6 THR A 255 GLN A 256 0 SHEET 2 AD 6 LYS A 264 GLU A 270 1 N TYR A 265 O THR A 255 SHEET 3 AD 6 ASN A 273 PRO A 279 -1 O ASN A 273 N GLU A 270 SHEET 4 AD 6 GLN A 220 THR A 226 -1 O TYR A 221 N ILE A 278 SHEET 5 AD 6 THR A 329 PRO A 336 -1 O ILE A 331 N THR A 226 SHEET 6 AD 6 GLN A 345 THR A 348 -1 O GLN A 345 N ALA A 332 SHEET 1 AE 2 ILE A 408 LEU A 414 0 SHEET 2 AE 2 GLY A 352 ASP A 360 -1 O GLY A 352 N GLY A 413 SHEET 1 AF 4 THR A 448 THR A 449 0 SHEET 2 AF 4 ASP A 452 VAL A 456 -1 N ASP A 452 O THR A 449 SHEET 3 AF 4 GLY A 352 ASP A 360 1 O GLN A 353 N VAL A 456 SHEET 4 AF 4 THR A 459 ASN A 462 1 O VAL A 460 N ILE A 359 SHEET 1 AG 4 THR A 448 THR A 449 0 SHEET 2 AG 4 ASP A 452 VAL A 456 -1 N ASP A 452 O THR A 449 SHEET 3 AG 4 GLY A 352 ASP A 360 1 O GLN A 353 N VAL A 456 SHEET 4 AG 4 ILE A 408 LEU A 414 -1 O ILE A 409 N ILE A 356 SHEET 1 AH 2 THR A 459 ASN A 462 0 SHEET 2 AH 2 GLY A 352 ASP A 360 1 O LYS A 357 N VAL A 460 SHEET 1 AI 4 TYR A 401 THR A 402 0 SHEET 2 AI 4 ILE A 371 LYS A 375 -1 O PHE A 372 N TYR A 401 SHEET 3 AI 4 GLY A 417 LYS A 425 -1 O TYR A 420 N LYS A 375 SHEET 4 AI 4 GLN A 437 LEU A 441 -1 O GLN A 437 N LEU A 421 SHEET 1 AJ 2 PHE A 381 ASN A 383 0 SHEET 2 AJ 2 GLU A 391 GLY A 393 -1 O GLU A 391 N ASN A 383 LINK OD1 ASP A 234 CA CA A1473 1555 2646 2.40 LINK O LEU A 235 CA CA A1473 1555 2646 2.34 LINK OE1 GLU A 237 CA CA A1473 1555 2646 2.46 LINK OD1 ASN A 250 CA CA A1473 1555 1555 2.37 LINK O ILE A 251 CA CA A1473 1555 1555 2.45 LINK OD1 ASN A 340 CA CA A1475 1555 1555 2.28 LINK OD1 ASP A 341 CA CA A1475 1555 1555 2.38 LINK OD1 ASN A 389 CA CA A1474 1555 1555 2.40 LINK O VAL A 390 CA CA A1474 1555 1555 2.34 LINK OE2 GLU A 391 CA CA A1474 1555 1555 2.42 LINK OE1 GLU A 391 CA CA A1475 1555 1455 2.34 LINK CA CA A1473 O HOH A2085 1555 2656 2.48 LINK CA CA A1473 O HOH A2086 1555 2656 2.46 LINK CA CA A1474 O HOH A2022 1555 1555 2.36 LINK CA CA A1474 O HOH A2025 1555 1555 2.52 LINK CA CA A1474 O HOH A2377 1555 1555 2.41 LINK CA CA A1474 O HOH A2379 1555 1555 2.37 LINK CA CA A1475 O HOH A2301 1555 1555 2.50 LINK CA CA A1475 O HOH A2303 1555 1555 2.46 LINK CA CA A1475 O HOH A2380 1555 1655 2.40 LINK CA CA A1475 O HOH A2381 1555 1655 2.41 SITE 1 AC1 6 ASN A 376 ALA A 377 GLY A 417 THR A 418 SITE 2 AC1 6 TYR A 419 HOH A2492 SITE 1 AC2 7 THR A 410 ILE A 411 THR A 412 HOH A2398 SITE 2 AC2 7 HOH A2409 HOH A2410 HOH A2494 SITE 1 AC3 2 ASN A 250 ILE A 251 SITE 1 AC4 7 ASN A 389 VAL A 390 GLU A 391 HOH A2022 SITE 2 AC4 7 HOH A2025 HOH A2377 HOH A2379 SITE 1 AC5 7 ASN A 340 ASP A 341 GLU A 391 HOH A2301 SITE 2 AC5 7 HOH A2303 HOH A2380 HOH A2381 CRYST1 47.640 53.920 54.770 90.00 90.97 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020991 0.000000 0.000355 0.00000 SCALE2 0.000000 0.018546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018261 0.00000