HEADER TRANSFERASE 10-SEP-14 4V05 TITLE FGFR1 IN COMPLEX WITH AZD4547. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR 1 (FMS-RELATED TYROSINE COMPND 3 KINASE 2, PFEIFFER SYNDROME), ISOFORM CRA_B; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: KINASE, UNP RESIDUES 22-329; COMPND 6 SYNONYM: FGFR1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.TUCKER,T.KLEIN,J.BREED,A.BREEZE,R.OVERMAN,C.PHILLIPS,R.A.NORMAN REVDAT 2 17-DEC-14 4V05 1 JRNL REVDAT 1 10-DEC-14 4V05 0 JRNL AUTH J.A.TUCKER,T.KLEIN,J.BREED,A.L.BREEZE,R.OVERMAN,C.PHILLIPS, JRNL AUTH 2 R.A.NORMAN JRNL TITL STRUCTURAL INSIGHTS INTO FGFR KINASE ISOFORM SELECTIVITY: JRNL TITL 2 DIVERSE BINDING MODES OF AZD4547 AND PONATINIB IN COMPLEX JRNL TITL 3 WITH FGFR1 AND FGFR4 JRNL REF STRUCTURE V. 22 1764 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25465127 JRNL DOI 10.1016/J.STR.2014.09.019 REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.61 REMARK 3 NUMBER OF REFLECTIONS : 22863 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.1955 REMARK 3 R VALUE (WORKING SET) : 0.1924 REMARK 3 FREE R VALUE : 0.2556 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.17 REMARK 3 FREE R VALUE TEST SET COUNT : 1182 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.69 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.61 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2966 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2168 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2812 REMARK 3 BIN R VALUE (WORKING SET) : 0.2122 REMARK 3 BIN FREE R VALUE : 0.2973 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.19 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4399 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 64.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.3553 REMARK 3 B22 (A**2) : -13.5285 REMARK 3 B33 (A**2) : 6.1731 REMARK 3 B12 (A**2) : 0.0000 REMARK 3 B13 (A**2) : 0.1216 REMARK 3 B23 (A**2) : 0.0000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.378 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.531 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.296 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.552 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.301 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.9395 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.9013 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4706 ; 2.00 ; HARMONIC REMARK 3 BOND ANGLES : 6435 ; 2.00 ; HARMONIC REMARK 3 TORSION ANGLES : 1598 ; 2.00 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 98 ; 2.00 ; HARMONIC REMARK 3 GENERAL PLANES : 673 ; 5.00 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4706 ; 20.00 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 590 ; 5.00 ; SEMIHARMONI REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5427 ; 4.00 ; SEMIHARMONI REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.12 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.81 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.78 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 81.1353 -2.5209 18.3112 REMARK 3 T TENSOR REMARK 3 T11: -0.1359 T22: -0.0004 REMARK 3 T33: -0.1992 T12: 0.0193 REMARK 3 T13: 0.0153 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.5824 L22: 0.4991 REMARK 3 L33: 1.3270 L12: -0.1935 REMARK 3 L13: -0.4332 L23: -0.2625 REMARK 3 S TENSOR REMARK 3 S11: 0.1480 S12: 0.0421 S13: 0.2134 REMARK 3 S21: -0.1194 S22: -0.0828 S23: 0.0366 REMARK 3 S31: -0.1092 S32: 0.0720 S33: -0.0652 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 34.2431 2.0786 13.8347 REMARK 3 T TENSOR REMARK 3 T11: -0.1372 T22: -0.0193 REMARK 3 T33: -0.1925 T12: 0.0515 REMARK 3 T13: -0.0485 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 4.1336 L22: 1.3440 REMARK 3 L33: 1.0254 L12: -0.8794 REMARK 3 L13: 0.0366 L23: 0.5067 REMARK 3 S TENSOR REMARK 3 S11: 0.2646 S12: 0.3504 S13: -0.2901 REMARK 3 S21: 0.0350 S22: -0.3013 S23: 0.0857 REMARK 3 S31: 0.0926 S32: -0.0184 S33: 0.0367 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4V05 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-SEP-14. REMARK 100 THE PDBE ID CODE IS EBI-61741. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22994 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.57 REMARK 200 RESOLUTION RANGE LOW (A) : 99.48 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 3.7 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.20 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 104.39000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.74000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 104.39000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.74000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 457 REMARK 465 ALA A 458 REMARK 465 GLY A 459 REMARK 465 VAL A 460 REMARK 465 SER A 461 REMARK 465 GLU A 462 REMARK 465 TYR A 463 REMARK 465 LEU A 581 REMARK 465 GLU A 582 REMARK 465 TYR A 583 REMARK 465 SER A 584 REMARK 465 TYR A 585 REMARK 465 ASN A 586 REMARK 465 PRO A 587 REMARK 465 SER A 588 REMARK 465 HIS A 589 REMARK 465 ASN A 590 REMARK 465 PRO A 591 REMARK 465 ASP A 647 REMARK 465 ILE A 648 REMARK 465 HIS A 649 REMARK 465 HIS A 650 REMARK 465 GLY B 457 REMARK 465 ALA B 458 REMARK 465 LYS B 502 REMARK 465 ASP B 503 REMARK 465 LYS B 504 REMARK 465 GLY B 580 REMARK 465 LEU B 581 REMARK 465 GLU B 582 REMARK 465 TYR B 583 REMARK 465 SER B 584 REMARK 465 TYR B 585 REMARK 465 ASN B 586 REMARK 465 PRO B 587 REMARK 465 SER B 588 REMARK 465 HIS B 589 REMARK 465 ASN B 590 REMARK 465 PRO B 591 REMARK 465 GLU B 592 REMARK 465 ALA B 645 REMARK 465 ARG B 646 REMARK 465 ASP B 647 REMARK 465 ILE B 648 REMARK 465 GLU B 765 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 464 CG CD OE1 OE2 REMARK 470 GLU A 467 CG CD OE1 OE2 REMARK 470 GLU A 486 CG CD OE1 OE2 REMARK 470 ASP A 501 CG OD1 OD2 REMARK 470 LYS A 502 CG CD CE NZ REMARK 470 ASP A 503 CG OD1 OD2 REMARK 470 ARG A 507 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 517 CG CD CE NZ REMARK 470 SER A 518 OG REMARK 470 ASP A 519 OD1 OD2 REMARK 470 GLU A 522 CG CD OE1 OE2 REMARK 470 LYS A 523 CG CD CE NZ REMARK 470 LYS A 542 CE NZ REMARK 470 GLU A 592 CG CD OE1 OE2 REMARK 470 GLU A 593 CG CD OE1 OE2 REMARK 470 LEU A 644 CG CD1 CD2 REMARK 470 ARG A 646 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 651 CG1 CG2 CD1 REMARK 470 LYS A 655 CG CD CE NZ REMARK 470 ARG A 675 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 707 CG CD OE1 OE2 REMARK 470 LYS A 711 CD CE NZ REMARK 470 LYS A 714 NZ REMARK 470 SER A 723 OG REMARK 470 ASN A 724 CG OD1 ND2 REMARK 470 SER A 762 OG REMARK 470 GLU B 462 CG CD OE1 OE2 REMARK 470 LYS B 482 CG CD CE NZ REMARK 470 GLU B 486 CG CD OE1 OE2 REMARK 470 ASP B 501 CG OD1 OD2 REMARK 470 ASN B 506 CG OD1 ND2 REMARK 470 ARG B 507 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 510 NZ REMARK 470 LYS B 517 CD CE NZ REMARK 470 GLU B 522 CG CD OE1 OE2 REMARK 470 LYS B 523 CD CE NZ REMARK 470 GLU B 593 CG CD OE1 OE2 REMARK 470 GLN B 594 CG CD OE1 NE2 REMARK 470 LYS B 618 CG CD CE NZ REMARK 470 LEU B 644 CG CD1 CD2 REMARK 470 HIS B 649 CG ND1 CD2 CE1 NE2 REMARK 470 ILE B 651 CG1 CG2 CD1 REMARK 470 LYS B 655 CD CE NZ REMARK 470 GLU B 707 CG CD OE1 OE2 REMARK 470 LYS B 714 CE NZ REMARK 470 ASP B 720 CG OD1 OD2 REMARK 470 ASN B 724 CG OD1 ND2 REMARK 470 MET B 731 CG SD CE REMARK 470 ASN B 763 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 486 39.67 -98.48 REMARK 500 ASP A 519 41.55 -82.63 REMARK 500 ARG A 622 -23.60 77.65 REMARK 500 TRP A 737 31.36 -98.40 REMARK 500 ARG B 622 -21.09 74.06 REMARK 500 ASN B 724 60.87 69.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASN A 543 24.2 L L OUTSIDE RANGE REMARK 500 ASP A 623 23.9 L L OUTSIDE RANGE REMARK 500 PHE A 694 23.2 L L OUTSIDE RANGE REMARK 500 ASP B 623 22.9 L L OUTSIDE RANGE REMARK 500 PHE B 694 24.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1766 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1765 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B1766 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1767 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A1768 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 66T A1769 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 66T B1767 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1770 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1768 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1771 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1772 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4V01 RELATED DB: PDB REMARK 900 FGFR1 IN COMPLEX WITH PONATINIB (CO-CRYSTALLISATION). REMARK 900 RELATED ID: 4V04 RELATED DB: PDB REMARK 900 FGFR1 IN COMPLEX WITH PONATINIB. REMARK 900 RELATED ID: 4UXQ RELATED DB: PDB REMARK 900 FGFR4 IN COMPLEX WITH PONATINIB DBREF 4V05 A 458 765 UNP D3DSX2 D3DSX2_HUMAN 22 329 DBREF 4V05 B 458 765 UNP D3DSX2 D3DSX2_HUMAN 22 329 SEQADV 4V05 GLY A 457 UNP D3DSX2 EXPRESSION TAG SEQADV 4V05 ALA A 488 UNP D3DSX2 CYS 52 CONFLICT SEQADV 4V05 SER A 584 UNP D3DSX2 CYS 148 CONFLICT SEQADV 4V05 GLY B 457 UNP D3DSX2 EXPRESSION TAG SEQADV 4V05 ALA B 488 UNP D3DSX2 CYS 52 CONFLICT SEQADV 4V05 SER B 584 UNP D3DSX2 CYS 148 CONFLICT SEQRES 1 A 309 GLY ALA GLY VAL SER GLU TYR GLU LEU PRO GLU ASP PRO SEQRES 2 A 309 ARG TRP GLU LEU PRO ARG ASP ARG LEU VAL LEU GLY LYS SEQRES 3 A 309 PRO LEU GLY GLU GLY ALA PHE GLY GLN VAL VAL LEU ALA SEQRES 4 A 309 GLU ALA ILE GLY LEU ASP LYS ASP LYS PRO ASN ARG VAL SEQRES 5 A 309 THR LYS VAL ALA VAL LYS MET LEU LYS SER ASP ALA THR SEQRES 6 A 309 GLU LYS ASP LEU SER ASP LEU ILE SER GLU MET GLU MET SEQRES 7 A 309 MET LYS MET ILE GLY LYS HIS LYS ASN ILE ILE ASN LEU SEQRES 8 A 309 LEU GLY ALA CYS THR GLN ASP GLY PRO LEU TYR VAL ILE SEQRES 9 A 309 VAL GLU TYR ALA SER LYS GLY ASN LEU ARG GLU TYR LEU SEQRES 10 A 309 GLN ALA ARG ARG PRO PRO GLY LEU GLU TYR SER TYR ASN SEQRES 11 A 309 PRO SER HIS ASN PRO GLU GLU GLN LEU SER SER LYS ASP SEQRES 12 A 309 LEU VAL SER CYS ALA TYR GLN VAL ALA ARG GLY MET GLU SEQRES 13 A 309 TYR LEU ALA SER LYS LYS CYS ILE HIS ARG ASP LEU ALA SEQRES 14 A 309 ALA ARG ASN VAL LEU VAL THR GLU ASP ASN VAL MET LYS SEQRES 15 A 309 ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE HIS HIS ILE SEQRES 16 A 309 ASP TYR TYR LYS LYS THR THR ASN GLY ARG LEU PRO VAL SEQRES 17 A 309 LYS TRP MET ALA PRO GLU ALA LEU PHE ASP ARG ILE TYR SEQRES 18 A 309 THR HIS GLN SER ASP VAL TRP SER PHE GLY VAL LEU LEU SEQRES 19 A 309 TRP GLU ILE PHE THR LEU GLY GLY SER PRO TYR PRO GLY SEQRES 20 A 309 VAL PRO VAL GLU GLU LEU PHE LYS LEU LEU LYS GLU GLY SEQRES 21 A 309 HIS ARG MET ASP LYS PRO SER ASN CYS THR ASN GLU LEU SEQRES 22 A 309 TYR MET MET MET ARG ASP CYS TRP HIS ALA VAL PRO SER SEQRES 23 A 309 GLN ARG PRO THR PHE LYS GLN LEU VAL GLU ASP LEU ASP SEQRES 24 A 309 ARG ILE VAL ALA LEU THR SER ASN GLN GLU SEQRES 1 B 309 GLY ALA GLY VAL SER GLU TYR GLU LEU PRO GLU ASP PRO SEQRES 2 B 309 ARG TRP GLU LEU PRO ARG ASP ARG LEU VAL LEU GLY LYS SEQRES 3 B 309 PRO LEU GLY GLU GLY ALA PHE GLY GLN VAL VAL LEU ALA SEQRES 4 B 309 GLU ALA ILE GLY LEU ASP LYS ASP LYS PRO ASN ARG VAL SEQRES 5 B 309 THR LYS VAL ALA VAL LYS MET LEU LYS SER ASP ALA THR SEQRES 6 B 309 GLU LYS ASP LEU SER ASP LEU ILE SER GLU MET GLU MET SEQRES 7 B 309 MET LYS MET ILE GLY LYS HIS LYS ASN ILE ILE ASN LEU SEQRES 8 B 309 LEU GLY ALA CYS THR GLN ASP GLY PRO LEU TYR VAL ILE SEQRES 9 B 309 VAL GLU TYR ALA SER LYS GLY ASN LEU ARG GLU TYR LEU SEQRES 10 B 309 GLN ALA ARG ARG PRO PRO GLY LEU GLU TYR SER TYR ASN SEQRES 11 B 309 PRO SER HIS ASN PRO GLU GLU GLN LEU SER SER LYS ASP SEQRES 12 B 309 LEU VAL SER CYS ALA TYR GLN VAL ALA ARG GLY MET GLU SEQRES 13 B 309 TYR LEU ALA SER LYS LYS CYS ILE HIS ARG ASP LEU ALA SEQRES 14 B 309 ALA ARG ASN VAL LEU VAL THR GLU ASP ASN VAL MET LYS SEQRES 15 B 309 ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE HIS HIS ILE SEQRES 16 B 309 ASP TYR TYR LYS LYS THR THR ASN GLY ARG LEU PRO VAL SEQRES 17 B 309 LYS TRP MET ALA PRO GLU ALA LEU PHE ASP ARG ILE TYR SEQRES 18 B 309 THR HIS GLN SER ASP VAL TRP SER PHE GLY VAL LEU LEU SEQRES 19 B 309 TRP GLU ILE PHE THR LEU GLY GLY SER PRO TYR PRO GLY SEQRES 20 B 309 VAL PRO VAL GLU GLU LEU PHE LYS LEU LEU LYS GLU GLY SEQRES 21 B 309 HIS ARG MET ASP LYS PRO SER ASN CYS THR ASN GLU LEU SEQRES 22 B 309 TYR MET MET MET ARG ASP CYS TRP HIS ALA VAL PRO SER SEQRES 23 B 309 GLN ARG PRO THR PHE LYS GLN LEU VAL GLU ASP LEU ASP SEQRES 24 B 309 ARG ILE VAL ALA LEU THR SER ASN GLN GLU HET EDO A1766 4 HET EDO B1765 4 HET EDO B1766 4 HET EDO A1767 4 HET EDO A1768 4 HET 66T A1769 67 HET 66T B1767 67 HET SO4 A1770 5 HET SO4 B1768 5 HET SO4 A1771 5 HET SO4 A1772 5 HETNAM 66T N-{3-[2-(3,5-DIMETHOXYPHENYL)ETHYL]-1H- HETNAM 2 66T PYRAZOL-5-YL}-4-[(3R,5S)-3,5-DIMETHYLPIPERAZIN-1- HETNAM 3 66T YL]BENZAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 66T 2(C26 H33 N5 O3) FORMUL 3 EDO 5(C2 H6 O2) FORMUL 4 SO4 4(O4 S 2-) FORMUL 5 HOH *143(H2 O) HELIX 1 1 PRO A 474 ASP A 476 5 3 HELIX 2 2 THR A 521 GLY A 539 1 19 HELIX 3 3 LEU A 569 ALA A 575 1 7 HELIX 4 4 SER A 596 LYS A 617 1 22 HELIX 5 5 ALA A 625 ARG A 627 5 3 HELIX 6 6 LEU A 662 MET A 667 5 6 HELIX 7 7 ALA A 668 ARG A 675 1 8 HELIX 8 8 THR A 678 THR A 695 1 18 HELIX 9 9 PRO A 705 GLU A 715 1 11 HELIX 10 10 THR A 726 TRP A 737 1 12 HELIX 11 11 VAL A 740 ARG A 744 5 5 HELIX 12 12 THR A 746 THR A 761 1 16 HELIX 13 13 GLY B 459 TYR B 463 5 5 HELIX 14 14 PRO B 474 ASP B 476 5 3 HELIX 15 15 THR B 521 GLY B 539 1 19 HELIX 16 16 ASN B 568 ALA B 575 1 8 HELIX 17 17 SER B 596 LYS B 617 1 22 HELIX 18 18 ALA B 625 ARG B 627 5 3 HELIX 19 19 LEU B 662 MET B 667 5 6 HELIX 20 20 ALA B 668 ARG B 675 1 8 HELIX 21 21 THR B 678 THR B 695 1 18 HELIX 22 22 PRO B 705 GLU B 715 1 11 HELIX 23 23 THR B 726 TRP B 737 1 12 HELIX 24 24 VAL B 740 ARG B 744 5 5 HELIX 25 25 THR B 746 THR B 761 1 16 SHEET 1 AA 5 LEU A 478 PRO A 483 0 SHEET 2 AA 5 GLN A 491 ILE A 498 -1 O LEU A 494 N GLY A 481 SHEET 3 AA 5 VAL A 508 MET A 515 -1 O THR A 509 N ALA A 497 SHEET 4 AA 5 TYR A 558 GLU A 562 -1 O VAL A 559 N LYS A 514 SHEET 5 AA 5 LEU A 547 CYS A 551 -1 N LEU A 548 O ILE A 560 SHEET 1 AB 3 GLY A 567 ASN A 568 0 SHEET 2 AB 3 VAL A 629 VAL A 631 -1 N VAL A 631 O GLY A 567 SHEET 3 AB 3 MET A 637 ILE A 639 -1 O LYS A 638 N LEU A 630 SHEET 1 BA 5 LEU B 478 PRO B 483 0 SHEET 2 BA 5 GLN B 491 ILE B 498 -1 O LEU B 494 N GLY B 481 SHEET 3 BA 5 VAL B 508 MET B 515 -1 O THR B 509 N ALA B 497 SHEET 4 BA 5 TYR B 558 GLU B 562 -1 O VAL B 559 N LYS B 514 SHEET 5 BA 5 LEU B 547 CYS B 551 -1 N LEU B 548 O ILE B 560 SHEET 1 BB 2 VAL B 629 VAL B 631 0 SHEET 2 BB 2 MET B 637 ILE B 639 -1 O LYS B 638 N LEU B 630 CISPEP 1 ASP A 503 LYS A 504 0 2.25 CISPEP 2 ASN B 763 GLN B 764 0 5.29 SITE 1 AC1 7 LYS A 665 TRP A 684 TYR A 701 ARG A 718 SITE 2 AC1 7 MET A 719 TRP A 737 HOH A2037 SITE 1 AC2 5 LYS B 514 LEU B 516 ASP B 524 LEU B 528 SITE 2 AC2 5 GLU B 531 SITE 1 AC3 5 TYR B 701 ARG B 718 MET B 719 TRP B 737 SITE 2 AC3 5 HOH B2043 SITE 1 AC4 5 ALA A 615 HIS A 679 THR A 746 PHE A 747 SITE 2 AC4 5 LYS A 748 SITE 1 AC5 3 LYS A 566 ARG A 576 66T A1769 SITE 1 AC6 15 LEU A 484 ALA A 512 LYS A 514 GLU A 531 SITE 2 AC6 15 ILE A 545 VAL A 561 GLU A 562 TYR A 563 SITE 3 AC6 15 ALA A 564 SER A 565 GLY A 567 GLU A 571 SITE 4 AC6 15 LEU A 630 ASP A 641 EDO A1768 SITE 1 AC7 16 ALA B 512 LYS B 514 MET B 535 ILE B 545 SITE 2 AC7 16 VAL B 559 VAL B 561 GLU B 562 TYR B 563 SITE 3 AC7 16 ALA B 564 SER B 565 GLY B 567 LEU B 630 SITE 4 AC7 16 ALA B 640 ASP B 641 PHE B 642 HOH B2063 SITE 1 AC8 7 ARG A 570 ARG A 627 THR A 657 ASN A 659 SITE 2 AC8 7 ARG A 661 HOH A2033 HOH A2035 SITE 1 AC9 6 ARG B 570 ARG B 627 THR B 657 ASN B 659 SITE 2 AC9 6 ARG B 661 HOH B2039 SITE 1 BC1 5 GLY A 539 LYS A 540 LYS A 618 HOH A2020 SITE 2 BC1 5 HOH A2077 SITE 1 BC2 4 ARG A 470 LYS A 618 HIS A 679 HOH A2004 CRYST1 208.780 57.480 65.580 90.00 107.64 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004790 0.000000 0.001523 0.00000 SCALE2 0.000000 0.017397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016001 0.00000 MTRIX1 1 -0.994200 0.107600 -0.003150 114.60000 1 MTRIX2 1 0.089000 0.840000 0.535200 -13.84000 1 MTRIX3 1 0.060000 0.532000 -0.845000 27.05000 1