HEADER LYASE 18-SEP-14 4V0S TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TYPE II DEHYDROQUINASE TITLE 2 D88N MUTANT INHIBITED BY A 3-DEHYDROQUINIC ACID DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-DEHYDROQUINATE DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-DEHYDROQUINASE, TYPE II DHQASE; COMPND 5 EC: 4.2.1.10; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 ATCC: 27294; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: SK3430; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PKK233-2 KEYWDS BINDING SITES, TYPE 2 DEHYDROQUINASE, LYASE, INHIBITOR, PROTEIN KEYWDS 2 BINDING, SHIKIMIS ACID PATHWAY, SUBSTRATE SPECIFICITY EXPDTA X-RAY DIFFRACTION AUTHOR J.M.OTERO,A.L.LLAMAS-SAIZ,C.SANTIAGO,H.LAMB,A.R.HAWKINS,M.MANEIRO, AUTHOR 2 A.PEON,C.GONZALEZ-BELLO,M.J.VAN RAAIJ REVDAT 3 10-JAN-24 4V0S 1 REMARK LINK REVDAT 2 24-JAN-18 4V0S 1 JRNL REVDAT 1 13-JAN-16 4V0S 0 JRNL AUTH M.MANEIRO,J.M.OTERO,A.PEON,M.J.VAN RAAIJ,H.LAMB, JRNL AUTH 2 A.R.HAWKINGS,C.GONZALEZ-BELLO JRNL TITL INVESTIGATION OF THE DEHYDRATATION MECHANISM CATALYZED BY JRNL TITL 2 THE TYPE II DEHYDROQUINASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 32331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1701 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3609 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.59 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE SET COUNT : 212 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2129 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.38000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.017 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2317 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2221 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3192 ; 1.465 ; 2.012 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5052 ; 0.811 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 296 ; 5.449 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;33.361 ;23.814 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 356 ;11.947 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;12.913 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 380 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2634 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 497 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 640 ; 0.252 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2157 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1136 ; 0.175 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1396 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 31 ; 0.116 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.080 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 44 ; 0.164 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.095 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 2 ; 0.083 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2317 ;11.758 ; 1.869 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2221 ; 4.339 ; 1.929 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3184 ;14.872 ; 2.768 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4035 ;14.398 ;19.172 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5052 ; 7.962 ; 2.829 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4538 ; 2.566 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 54 ;27.883 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4590 ;11.769 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES ARE REFINED INDIVIDUALLY. GAP BY DISORDERED REMARK 3 REGION BETWEEN ALA-107 AND HIS-114 IN CHAIN A. REMARK 4 REMARK 4 4V0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1290061769. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00227 REMARK 200 MONOCHROMATOR : CHANNEL-CUT DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : PLANE-ELLIPSOIDAL MIRRORS (SI, REMARK 200 RH, IR) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34076 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 94.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2Y71 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG4000, 100 MM NA-CITRATE PH 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.59350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.37750 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.59350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.37750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2009 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2028 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2033 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 108 REMARK 465 GLU A 109 REMARK 465 GLU A 110 REMARK 465 PHE A 111 REMARK 465 ARG A 112 REMARK 465 ARG A 113 REMARK 465 SER B 1 REMARK 465 GLY B 145 REMARK 465 THR B 146 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 12 -27.95 96.30 REMARK 500 ASN B 12 -27.38 90.98 REMARK 500 GLU B 109 19.27 -142.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1151 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 39 OE1 REMARK 620 2 GLU A 39 OE2 50.5 REMARK 620 3 GLU A 42 OE1 85.1 86.4 REMARK 620 4 GLU B 20 OE2 133.5 84.6 80.5 REMARK 620 5 HOH B2011 O 153.8 150.9 83.0 67.0 REMARK 620 N 1 2 3 4 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2HN A 1147 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2HN A 1148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7HN A 1149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2HN B 1145 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1151 DBREF 4V0S A 1 146 UNP P9WPX6 AROQ_MYCTO 2 147 DBREF 4V0S B 1 146 UNP P9WPX6 AROQ_MYCTO 2 147 SEQADV 4V0S ASN A 88 UNP P9WPX6 ASP 89 ENGINEERED MUTATION SEQADV 4V0S ASN B 88 UNP P9WPX6 ASP 89 ENGINEERED MUTATION SEQRES 1 A 146 SER GLU LEU ILE VAL ASN VAL ILE ASN GLY PRO ASN LEU SEQRES 2 A 146 GLY ARG LEU GLY ARG ARG GLU PRO ALA VAL TYR GLY GLY SEQRES 3 A 146 THR THR HIS ASP GLU LEU VAL ALA LEU ILE GLU ARG GLU SEQRES 4 A 146 ALA ALA GLU LEU GLY LEU LYS ALA VAL VAL ARG GLN SER SEQRES 5 A 146 ASP SER GLU ALA GLN LEU LEU ASP TRP ILE HIS GLN ALA SEQRES 6 A 146 ALA ASP ALA ALA GLU PRO VAL ILE LEU ASN ALA GLY GLY SEQRES 7 A 146 LEU THR HIS THR SER VAL ALA LEU ARG ASN ALA CYS ALA SEQRES 8 A 146 GLU LEU SER ALA PRO LEU ILE GLU VAL HIS ILE SER ASN SEQRES 9 A 146 VAL HIS ALA ARG GLU GLU PHE ARG ARG HIS SER TYR LEU SEQRES 10 A 146 SER PRO ILE ALA THR GLY VAL ILE VAL GLY LEU GLY ILE SEQRES 11 A 146 GLN GLY TYR LEU LEU ALA LEU ARG TYR LEU ALA GLU HIS SEQRES 12 A 146 VAL GLY THR SEQRES 1 B 146 SER GLU LEU ILE VAL ASN VAL ILE ASN GLY PRO ASN LEU SEQRES 2 B 146 GLY ARG LEU GLY ARG ARG GLU PRO ALA VAL TYR GLY GLY SEQRES 3 B 146 THR THR HIS ASP GLU LEU VAL ALA LEU ILE GLU ARG GLU SEQRES 4 B 146 ALA ALA GLU LEU GLY LEU LYS ALA VAL VAL ARG GLN SER SEQRES 5 B 146 ASP SER GLU ALA GLN LEU LEU ASP TRP ILE HIS GLN ALA SEQRES 6 B 146 ALA ASP ALA ALA GLU PRO VAL ILE LEU ASN ALA GLY GLY SEQRES 7 B 146 LEU THR HIS THR SER VAL ALA LEU ARG ASN ALA CYS ALA SEQRES 8 B 146 GLU LEU SER ALA PRO LEU ILE GLU VAL HIS ILE SER ASN SEQRES 9 B 146 VAL HIS ALA ARG GLU GLU PHE ARG ARG HIS SER TYR LEU SEQRES 10 B 146 SER PRO ILE ALA THR GLY VAL ILE VAL GLY LEU GLY ILE SEQRES 11 B 146 GLN GLY TYR LEU LEU ALA LEU ARG TYR LEU ALA GLU HIS SEQRES 12 B 146 VAL GLY THR HET 2HN A1147 25 HET 2HN A1148 25 HET 7HN A1149 23 HET CL A1150 1 HET NA A1151 1 HET 2HN B1145 25 HET CL B1146 1 HETNAM 2HN (1R,2S,4S,5R)-2-(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL-1, HETNAM 2 2HN 4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID HETNAM 7HN 3,4-DIHYDROXY-2-[(2,3,4,5,6-PENTAFLUOROPHENYL) HETNAM 2 7HN METHYL]BENZOIC ACID HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN 2HN (1R,2S,4S,5R)-2-(PERFLUOROPHENYL)METHYL-1,4,5- HETSYN 2 2HN TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID FORMUL 3 2HN 3(C14 H11 F5 O6) FORMUL 5 7HN C14 H7 F5 O4 FORMUL 6 CL 2(CL 1-) FORMUL 7 NA NA 1+ FORMUL 10 HOH *150(H2 O) HELIX 1 1 ASN A 12 LEU A 16 5 5 HELIX 2 2 GLU A 20 GLY A 25 1 6 HELIX 3 3 THR A 28 GLY A 44 1 17 HELIX 4 4 SER A 54 ALA A 69 1 16 HELIX 5 5 ALA A 76 THR A 80 5 5 HELIX 6 6 SER A 83 GLU A 92 1 10 HELIX 7 7 LEU A 117 ALA A 121 5 5 HELIX 8 8 ILE A 130 VAL A 144 1 15 HELIX 9 9 ASN B 12 LEU B 16 5 5 HELIX 10 10 GLU B 20 GLY B 25 1 6 HELIX 11 11 THR B 28 GLY B 44 1 17 HELIX 12 12 SER B 54 ALA B 69 1 16 HELIX 13 13 ALA B 76 THR B 80 5 5 HELIX 14 14 SER B 83 GLU B 92 1 10 HELIX 15 15 ASN B 104 GLU B 109 1 6 HELIX 16 16 LEU B 117 ALA B 121 5 5 HELIX 17 17 ILE B 130 VAL B 144 1 15 SHEET 1 AA10 LEU A 45 GLN A 51 0 SHEET 2 AA10 LEU A 3 ASN A 9 1 O LEU A 3 N LYS A 46 SHEET 3 AA10 VAL A 72 ASN A 75 1 O ILE A 73 N ILE A 8 SHEET 4 AA10 LEU A 97 HIS A 101 1 O ILE A 98 N LEU A 74 SHEET 5 AA10 GLY A 123 VAL A 126 1 O GLY A 123 N GLU A 99 SHEET 6 AA10 GLY B 123 VAL B 126 -1 O VAL B 124 N VAL A 126 SHEET 7 AA10 LEU B 97 HIS B 101 1 O GLU B 99 N ILE B 125 SHEET 8 AA10 VAL B 72 ASN B 75 1 O VAL B 72 N ILE B 98 SHEET 9 AA10 ILE B 4 ASN B 9 1 O ASN B 6 N ILE B 73 SHEET 10 AA10 LYS B 46 GLN B 51 1 O LYS B 46 N VAL B 5 LINK OE1 GLU A 39 NA NA A1151 1555 1555 2.59 LINK OE2 GLU A 39 NA NA A1151 1555 1555 2.54 LINK OE1 GLU A 42 NA NA A1151 1555 1555 2.33 LINK NA NA A1151 OE2 GLU B 20 1555 3545 2.36 LINK NA NA A1151 O HOH B2011 1555 3545 2.31 SITE 1 AC1 14 PRO A 11 ASN A 12 LEU A 13 ARG A 15 SITE 2 AC1 14 LEU A 16 ARG A 19 TYR A 24 ASN A 75 SITE 3 AC1 14 GLY A 77 GLY A 78 HIS A 101 ILE A 102 SITE 4 AC1 14 SER A 103 HOH A2060 SITE 1 AC2 12 ASN A 6 ILE A 8 VAL A 48 ARG A 50 SITE 2 AC2 12 TRP A 61 GLN A 64 ALA A 65 HOH A2048 SITE 3 AC2 12 HOH A2088 HOH A2089 HIS B 29 ASP B 30 SITE 1 AC3 11 ASP A 60 HIS A 63 ASP A 67 ARG A 87 SITE 2 AC3 11 ASN A 88 ALA A 91 HOH A2047 HOH A2065 SITE 3 AC3 11 ALA B 34 GLU B 37 ARG B 38 SITE 1 AC4 15 GLU A 42 PRO B 11 ASN B 12 LEU B 13 SITE 2 AC4 15 LEU B 16 ARG B 19 TYR B 24 ASN B 75 SITE 3 AC4 15 GLY B 77 GLY B 78 HIS B 101 ILE B 102 SITE 4 AC4 15 SER B 103 ARG B 108 HOH B2046 SITE 1 AC5 2 GLN A 131 ARG A 138 SITE 1 AC6 2 GLN B 131 ARG B 138 SITE 1 AC7 4 GLU A 39 GLU A 42 GLU B 20 HOH B2011 CRYST1 38.848 65.187 94.755 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010554 0.00000