data_4V1I # _entry.id 4V1I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4V1I pdb_00004v1i 10.2210/pdb4v1i/pdb PDBE EBI-61853 ? ? WWPDB D_1290061853 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-01-20 2 'Structure model' 1 1 2016-06-29 3 'Structure model' 1 2 2016-07-13 4 'Structure model' 1 3 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4V1I _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2014-09-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 4V17 unspecified 'STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1' PDB 4V18 unspecified ;SEMET STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ; PDB 4V1B unspecified ;STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 5 GLUCANASE FROM RUMINOCOCCUS FLAVEFACIENS FD-1 COLLECTED AT THE ZN EDGE ; PDB 4V1K unspecified ;SEMET STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 9 (CEL9A) FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ; PDB 4V1L unspecified ;HIGH RESOLUTION STRUCTURE OF A NOVEL CARBOHYDRATE BINDING MODULE FROM GLYCOSIDE HYDROLASE FAMILY 9 (CEL9A ) FROM RUMINOCOCCUS FLAVEFACIENS FD-1 ; # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Venditto, I.' 1 'Centeno, M.S.J.' 2 'Ferreira, L.M.A.' 3 'Fontes, C.M.G.A.' 4 'Najmudin, S.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Complexity of the Ruminococcus Flavefaciens Cellulosome Reflects an Expansion in Glycan Recognition.' Proc.Natl.Acad.Sci.USA 113 7136 ? 2016 PNASA6 US 0027-8424 0040 ? 27298375 10.1073/PNAS.1601558113 1 'Expression, Purification and Crystallization of a Novel Carbohydrate-Binding Module from the Ruminococcus Flavefaciens Cellulosome.' 'Acta Crystallogr.,Sect.F' 70 1653 ? 2014 ? DK 1744-3091 ? ? 25484220 10.1107/S2053230X14024248 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Venditto, I.' 1 ? primary 'Luis, A.S.' 2 ? primary 'Rydahl, M.' 3 ? primary 'Schuckel, J.' 4 ? primary 'Fernandes, V.O.' 5 ? primary 'Vidal-Melgosa, S.' 6 ? primary 'Bule, P.' 7 ? primary 'Goyal, A.' 8 ? primary 'Pires, V.M.R.' 9 ? primary 'Dourado, C.G.' 10 ? primary 'Ferreira, L.M.A.' 11 ? primary 'Coutinho, P.M.' 12 ? primary 'Henrissat, B.' 13 ? primary 'Knox, J.P.' 14 ? primary 'Basle, A.' 15 ? primary 'Najmudin, S.' 16 ? primary 'Gilbert, H.J.' 17 ? primary 'Willats, W.G.T.' 18 ? primary 'Fontes, C.M.G.A.' 19 ? 1 'Venditto, I.' 20 ? 1 'Centeno, M.S.J.' 21 ? 1 'Ferreira, L.M.A.' 22 ? 1 'Fontes, C.M.G.A.' 23 ? 1 'Najmudin, S.' 24 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CARBOHYDRATE BINDING MODULE' 17273.186 2 ? ? ? ? 2 water nat water 18.015 10 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGLAPLADGEKLYGKKGSEGTVTFTKAIGDNAFVEIKTGADTGFMNGCLGFSESIDGKNYWVAYVWQTKKSDTISIDMSS PVQIAEIIGTETQEVTDADTIKKLTDKIKTEKSALLQVWYASDKTGKQIDPADSASESIEVYIPSASADEALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGLAPLADGEKLYGKKGSEGTVTFTKAIGDNAFVEIKTGADTGFMNGCLGFSESIDGKNYWVAYVWQTKKSDTISIDMSS PVQIAEIIGTETQEVTDADTIKKLTDKIKTEKSALLQVWYASDKTGKQIDPADSASESIEVYIPSASADEALEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LEU n 1 4 ALA n 1 5 PRO n 1 6 LEU n 1 7 ALA n 1 8 ASP n 1 9 GLY n 1 10 GLU n 1 11 LYS n 1 12 LEU n 1 13 TYR n 1 14 GLY n 1 15 LYS n 1 16 LYS n 1 17 GLY n 1 18 SER n 1 19 GLU n 1 20 GLY n 1 21 THR n 1 22 VAL n 1 23 THR n 1 24 PHE n 1 25 THR n 1 26 LYS n 1 27 ALA n 1 28 ILE n 1 29 GLY n 1 30 ASP n 1 31 ASN n 1 32 ALA n 1 33 PHE n 1 34 VAL n 1 35 GLU n 1 36 ILE n 1 37 LYS n 1 38 THR n 1 39 GLY n 1 40 ALA n 1 41 ASP n 1 42 THR n 1 43 GLY n 1 44 PHE n 1 45 MET n 1 46 ASN n 1 47 GLY n 1 48 CYS n 1 49 LEU n 1 50 GLY n 1 51 PHE n 1 52 SER n 1 53 GLU n 1 54 SER n 1 55 ILE n 1 56 ASP n 1 57 GLY n 1 58 LYS n 1 59 ASN n 1 60 TYR n 1 61 TRP n 1 62 VAL n 1 63 ALA n 1 64 TYR n 1 65 VAL n 1 66 TRP n 1 67 GLN n 1 68 THR n 1 69 LYS n 1 70 LYS n 1 71 SER n 1 72 ASP n 1 73 THR n 1 74 ILE n 1 75 SER n 1 76 ILE n 1 77 ASP n 1 78 MET n 1 79 SER n 1 80 SER n 1 81 PRO n 1 82 VAL n 1 83 GLN n 1 84 ILE n 1 85 ALA n 1 86 GLU n 1 87 ILE n 1 88 ILE n 1 89 GLY n 1 90 THR n 1 91 GLU n 1 92 THR n 1 93 GLN n 1 94 GLU n 1 95 VAL n 1 96 THR n 1 97 ASP n 1 98 ALA n 1 99 ASP n 1 100 THR n 1 101 ILE n 1 102 LYS n 1 103 LYS n 1 104 LEU n 1 105 THR n 1 106 ASP n 1 107 LYS n 1 108 ILE n 1 109 LYS n 1 110 THR n 1 111 GLU n 1 112 LYS n 1 113 SER n 1 114 ALA n 1 115 LEU n 1 116 LEU n 1 117 GLN n 1 118 VAL n 1 119 TRP n 1 120 TYR n 1 121 ALA n 1 122 SER n 1 123 ASP n 1 124 LYS n 1 125 THR n 1 126 GLY n 1 127 LYS n 1 128 GLN n 1 129 ILE n 1 130 ASP n 1 131 PRO n 1 132 ALA n 1 133 ASP n 1 134 SER n 1 135 ALA n 1 136 SER n 1 137 GLU n 1 138 SER n 1 139 ILE n 1 140 GLU n 1 141 VAL n 1 142 TYR n 1 143 ILE n 1 144 PRO n 1 145 SER n 1 146 ALA n 1 147 SER n 1 148 ALA n 1 149 ASP n 1 150 GLU n 1 151 ALA n 1 152 LEU n 1 153 GLU n 1 154 HIS n 1 155 HIS n 1 156 HIS n 1 157 HIS n 1 158 HIS n 1 159 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain FD-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'RUMINOCOCCUS FLAVEFACIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 641112 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET-28A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 436 ? ? ? A . n A 1 2 GLY 2 437 437 GLY GLY A . n A 1 3 LEU 3 438 438 LEU LEU A . n A 1 4 ALA 4 439 439 ALA ALA A . n A 1 5 PRO 5 440 440 PRO PRO A . n A 1 6 LEU 6 441 441 LEU LEU A . n A 1 7 ALA 7 442 442 ALA ALA A . n A 1 8 ASP 8 443 443 ASP ASP A . n A 1 9 GLY 9 444 444 GLY GLY A . n A 1 10 GLU 10 445 445 GLU GLU A . n A 1 11 LYS 11 446 446 LYS LYS A . n A 1 12 LEU 12 447 447 LEU LEU A . n A 1 13 TYR 13 448 448 TYR TYR A . n A 1 14 GLY 14 449 449 GLY GLY A . n A 1 15 LYS 15 450 450 LYS LYS A . n A 1 16 LYS 16 451 451 LYS LYS A . n A 1 17 GLY 17 452 452 GLY GLY A . n A 1 18 SER 18 453 453 SER SER A . n A 1 19 GLU 19 454 454 GLU GLU A . n A 1 20 GLY 20 455 455 GLY GLY A . n A 1 21 THR 21 456 456 THR THR A . n A 1 22 VAL 22 457 457 VAL VAL A . n A 1 23 THR 23 458 458 THR THR A . n A 1 24 PHE 24 459 459 PHE PHE A . n A 1 25 THR 25 460 460 THR THR A . n A 1 26 LYS 26 461 461 LYS LYS A . n A 1 27 ALA 27 462 462 ALA ALA A . n A 1 28 ILE 28 463 463 ILE ILE A . n A 1 29 GLY 29 464 464 GLY GLY A . n A 1 30 ASP 30 465 465 ASP ASP A . n A 1 31 ASN 31 466 466 ASN ASN A . n A 1 32 ALA 32 467 467 ALA ALA A . n A 1 33 PHE 33 468 468 PHE PHE A . n A 1 34 VAL 34 469 469 VAL VAL A . n A 1 35 GLU 35 470 470 GLU GLU A . n A 1 36 ILE 36 471 471 ILE ILE A . n A 1 37 LYS 37 472 472 LYS LYS A . n A 1 38 THR 38 473 473 THR THR A . n A 1 39 GLY 39 474 474 GLY GLY A . n A 1 40 ALA 40 475 475 ALA ALA A . n A 1 41 ASP 41 476 476 ASP ASP A . n A 1 42 THR 42 477 477 THR THR A . n A 1 43 GLY 43 478 478 GLY GLY A . n A 1 44 PHE 44 479 479 PHE PHE A . n A 1 45 MET 45 480 480 MET MET A . n A 1 46 ASN 46 481 481 ASN ASN A . n A 1 47 GLY 47 482 482 GLY GLY A . n A 1 48 CYS 48 483 483 CYS CYS A . n A 1 49 LEU 49 484 484 LEU LEU A . n A 1 50 GLY 50 485 485 GLY GLY A . n A 1 51 PHE 51 486 486 PHE PHE A . n A 1 52 SER 52 487 487 SER SER A . n A 1 53 GLU 53 488 488 GLU GLU A . n A 1 54 SER 54 489 489 SER SER A . n A 1 55 ILE 55 490 490 ILE ILE A . n A 1 56 ASP 56 491 491 ASP ASP A . n A 1 57 GLY 57 492 492 GLY GLY A . n A 1 58 LYS 58 493 493 LYS LYS A . n A 1 59 ASN 59 494 494 ASN ASN A . n A 1 60 TYR 60 495 495 TYR TYR A . n A 1 61 TRP 61 496 496 TRP TRP A . n A 1 62 VAL 62 497 497 VAL VAL A . n A 1 63 ALA 63 498 498 ALA ALA A . n A 1 64 TYR 64 499 499 TYR TYR A . n A 1 65 VAL 65 500 500 VAL VAL A . n A 1 66 TRP 66 501 501 TRP TRP A . n A 1 67 GLN 67 502 502 GLN GLN A . n A 1 68 THR 68 503 503 THR THR A . n A 1 69 LYS 69 504 504 LYS LYS A . n A 1 70 LYS 70 505 505 LYS LYS A . n A 1 71 SER 71 506 506 SER SER A . n A 1 72 ASP 72 507 507 ASP ASP A . n A 1 73 THR 73 508 508 THR THR A . n A 1 74 ILE 74 509 509 ILE ILE A . n A 1 75 SER 75 510 510 SER SER A . n A 1 76 ILE 76 511 511 ILE ILE A . n A 1 77 ASP 77 512 512 ASP ASP A . n A 1 78 MET 78 513 513 MET MET A . n A 1 79 SER 79 514 514 SER SER A . n A 1 80 SER 80 515 515 SER SER A . n A 1 81 PRO 81 516 516 PRO PRO A . n A 1 82 VAL 82 517 517 VAL VAL A . n A 1 83 GLN 83 518 518 GLN GLN A . n A 1 84 ILE 84 519 519 ILE ILE A . n A 1 85 ALA 85 520 520 ALA ALA A . n A 1 86 GLU 86 521 521 GLU GLU A . n A 1 87 ILE 87 522 522 ILE ILE A . n A 1 88 ILE 88 523 523 ILE ILE A . n A 1 89 GLY 89 524 524 GLY GLY A . n A 1 90 THR 90 525 525 THR THR A . n A 1 91 GLU 91 526 526 GLU GLU A . n A 1 92 THR 92 527 527 THR THR A . n A 1 93 GLN 93 528 528 GLN GLN A . n A 1 94 GLU 94 529 529 GLU GLU A . n A 1 95 VAL 95 530 530 VAL VAL A . n A 1 96 THR 96 531 531 THR THR A . n A 1 97 ASP 97 532 532 ASP ASP A . n A 1 98 ALA 98 533 533 ALA ALA A . n A 1 99 ASP 99 534 534 ASP ASP A . n A 1 100 THR 100 535 535 THR THR A . n A 1 101 ILE 101 536 536 ILE ILE A . n A 1 102 LYS 102 537 537 LYS LYS A . n A 1 103 LYS 103 538 538 LYS LYS A . n A 1 104 LEU 104 539 539 LEU LEU A . n A 1 105 THR 105 540 540 THR THR A . n A 1 106 ASP 106 541 541 ASP ASP A . n A 1 107 LYS 107 542 542 LYS LYS A . n A 1 108 ILE 108 543 543 ILE ILE A . n A 1 109 LYS 109 544 544 LYS LYS A . n A 1 110 THR 110 545 545 THR THR A . n A 1 111 GLU 111 546 546 GLU GLU A . n A 1 112 LYS 112 547 547 LYS LYS A . n A 1 113 SER 113 548 548 SER SER A . n A 1 114 ALA 114 549 549 ALA ALA A . n A 1 115 LEU 115 550 550 LEU LEU A . n A 1 116 LEU 116 551 551 LEU LEU A . n A 1 117 GLN 117 552 552 GLN GLN A . n A 1 118 VAL 118 553 553 VAL VAL A . n A 1 119 TRP 119 554 554 TRP TRP A . n A 1 120 TYR 120 555 555 TYR TYR A . n A 1 121 ALA 121 556 556 ALA ALA A . n A 1 122 SER 122 557 557 SER SER A . n A 1 123 ASP 123 558 558 ASP ASP A . n A 1 124 LYS 124 559 559 LYS LYS A . n A 1 125 THR 125 560 560 THR THR A . n A 1 126 GLY 126 561 561 GLY GLY A . n A 1 127 LYS 127 562 562 LYS LYS A . n A 1 128 GLN 128 563 563 GLN GLN A . n A 1 129 ILE 129 564 564 ILE ILE A . n A 1 130 ASP 130 565 565 ASP ASP A . n A 1 131 PRO 131 566 566 PRO PRO A . n A 1 132 ALA 132 567 567 ALA ALA A . n A 1 133 ASP 133 568 568 ASP ASP A . n A 1 134 SER 134 569 569 SER SER A . n A 1 135 ALA 135 570 570 ALA ALA A . n A 1 136 SER 136 571 571 SER SER A . n A 1 137 GLU 137 572 572 GLU GLU A . n A 1 138 SER 138 573 573 SER SER A . n A 1 139 ILE 139 574 574 ILE ILE A . n A 1 140 GLU 140 575 575 GLU GLU A . n A 1 141 VAL 141 576 576 VAL VAL A . n A 1 142 TYR 142 577 577 TYR TYR A . n A 1 143 ILE 143 578 578 ILE ILE A . n A 1 144 PRO 144 579 579 PRO PRO A . n A 1 145 SER 145 580 580 SER SER A . n A 1 146 ALA 146 581 581 ALA ALA A . n A 1 147 SER 147 582 582 SER SER A . n A 1 148 ALA 148 583 583 ALA ALA A . n A 1 149 ASP 149 584 584 ASP ASP A . n A 1 150 GLU 150 585 585 GLU GLU A . n A 1 151 ALA 151 586 586 ALA ALA A . n A 1 152 LEU 152 587 587 LEU LEU A . n A 1 153 GLU 153 588 ? ? ? A . n A 1 154 HIS 154 589 ? ? ? A . n A 1 155 HIS 155 590 ? ? ? A . n A 1 156 HIS 156 591 ? ? ? A . n A 1 157 HIS 157 592 ? ? ? A . n A 1 158 HIS 158 593 ? ? ? A . n A 1 159 HIS 159 594 ? ? ? A . n B 1 1 MET 1 436 ? ? ? B . n B 1 2 GLY 2 437 437 GLY GLY B . n B 1 3 LEU 3 438 438 LEU LEU B . n B 1 4 ALA 4 439 439 ALA ALA B . n B 1 5 PRO 5 440 440 PRO PRO B . n B 1 6 LEU 6 441 441 LEU LEU B . n B 1 7 ALA 7 442 442 ALA ALA B . n B 1 8 ASP 8 443 443 ASP ASP B . n B 1 9 GLY 9 444 444 GLY GLY B . n B 1 10 GLU 10 445 445 GLU GLU B . n B 1 11 LYS 11 446 446 LYS LYS B . n B 1 12 LEU 12 447 447 LEU LEU B . n B 1 13 TYR 13 448 448 TYR TYR B . n B 1 14 GLY 14 449 449 GLY GLY B . n B 1 15 LYS 15 450 450 LYS LYS B . n B 1 16 LYS 16 451 451 LYS LYS B . n B 1 17 GLY 17 452 452 GLY GLY B . n B 1 18 SER 18 453 453 SER SER B . n B 1 19 GLU 19 454 454 GLU GLU B . n B 1 20 GLY 20 455 455 GLY GLY B . n B 1 21 THR 21 456 456 THR THR B . n B 1 22 VAL 22 457 457 VAL VAL B . n B 1 23 THR 23 458 458 THR THR B . n B 1 24 PHE 24 459 459 PHE PHE B . n B 1 25 THR 25 460 460 THR THR B . n B 1 26 LYS 26 461 461 LYS LYS B . n B 1 27 ALA 27 462 462 ALA ALA B . n B 1 28 ILE 28 463 463 ILE ILE B . n B 1 29 GLY 29 464 464 GLY GLY B . n B 1 30 ASP 30 465 465 ASP ASP B . n B 1 31 ASN 31 466 466 ASN ASN B . n B 1 32 ALA 32 467 467 ALA ALA B . n B 1 33 PHE 33 468 468 PHE PHE B . n B 1 34 VAL 34 469 469 VAL VAL B . n B 1 35 GLU 35 470 470 GLU GLU B . n B 1 36 ILE 36 471 471 ILE ILE B . n B 1 37 LYS 37 472 472 LYS LYS B . n B 1 38 THR 38 473 473 THR THR B . n B 1 39 GLY 39 474 474 GLY GLY B . n B 1 40 ALA 40 475 475 ALA ALA B . n B 1 41 ASP 41 476 476 ASP ASP B . n B 1 42 THR 42 477 477 THR THR B . n B 1 43 GLY 43 478 478 GLY GLY B . n B 1 44 PHE 44 479 479 PHE PHE B . n B 1 45 MET 45 480 480 MET MET B . n B 1 46 ASN 46 481 481 ASN ASN B . n B 1 47 GLY 47 482 482 GLY GLY B . n B 1 48 CYS 48 483 483 CYS CYS B . n B 1 49 LEU 49 484 484 LEU LEU B . n B 1 50 GLY 50 485 485 GLY GLY B . n B 1 51 PHE 51 486 486 PHE PHE B . n B 1 52 SER 52 487 487 SER SER B . n B 1 53 GLU 53 488 488 GLU GLU B . n B 1 54 SER 54 489 489 SER SER B . n B 1 55 ILE 55 490 490 ILE ILE B . n B 1 56 ASP 56 491 491 ASP ASP B . n B 1 57 GLY 57 492 492 GLY GLY B . n B 1 58 LYS 58 493 493 LYS LYS B . n B 1 59 ASN 59 494 494 ASN ASN B . n B 1 60 TYR 60 495 495 TYR TYR B . n B 1 61 TRP 61 496 496 TRP TRP B . n B 1 62 VAL 62 497 497 VAL VAL B . n B 1 63 ALA 63 498 498 ALA ALA B . n B 1 64 TYR 64 499 499 TYR TYR B . n B 1 65 VAL 65 500 500 VAL VAL B . n B 1 66 TRP 66 501 501 TRP TRP B . n B 1 67 GLN 67 502 502 GLN GLN B . n B 1 68 THR 68 503 503 THR THR B . n B 1 69 LYS 69 504 504 LYS LYS B . n B 1 70 LYS 70 505 505 LYS LYS B . n B 1 71 SER 71 506 506 SER SER B . n B 1 72 ASP 72 507 507 ASP ASP B . n B 1 73 THR 73 508 508 THR THR B . n B 1 74 ILE 74 509 509 ILE ILE B . n B 1 75 SER 75 510 510 SER SER B . n B 1 76 ILE 76 511 511 ILE ILE B . n B 1 77 ASP 77 512 512 ASP ASP B . n B 1 78 MET 78 513 513 MET MET B . n B 1 79 SER 79 514 514 SER SER B . n B 1 80 SER 80 515 515 SER SER B . n B 1 81 PRO 81 516 516 PRO PRO B . n B 1 82 VAL 82 517 517 VAL VAL B . n B 1 83 GLN 83 518 518 GLN GLN B . n B 1 84 ILE 84 519 519 ILE ILE B . n B 1 85 ALA 85 520 520 ALA ALA B . n B 1 86 GLU 86 521 521 GLU GLU B . n B 1 87 ILE 87 522 522 ILE ILE B . n B 1 88 ILE 88 523 523 ILE ILE B . n B 1 89 GLY 89 524 524 GLY GLY B . n B 1 90 THR 90 525 525 THR THR B . n B 1 91 GLU 91 526 526 GLU GLU B . n B 1 92 THR 92 527 527 THR THR B . n B 1 93 GLN 93 528 528 GLN GLN B . n B 1 94 GLU 94 529 529 GLU GLU B . n B 1 95 VAL 95 530 530 VAL VAL B . n B 1 96 THR 96 531 531 THR THR B . n B 1 97 ASP 97 532 532 ASP ASP B . n B 1 98 ALA 98 533 533 ALA ALA B . n B 1 99 ASP 99 534 534 ASP ASP B . n B 1 100 THR 100 535 535 THR THR B . n B 1 101 ILE 101 536 536 ILE ILE B . n B 1 102 LYS 102 537 537 LYS LYS B . n B 1 103 LYS 103 538 538 LYS LYS B . n B 1 104 LEU 104 539 539 LEU LEU B . n B 1 105 THR 105 540 540 THR THR B . n B 1 106 ASP 106 541 541 ASP ASP B . n B 1 107 LYS 107 542 542 LYS LYS B . n B 1 108 ILE 108 543 543 ILE ILE B . n B 1 109 LYS 109 544 544 LYS LYS B . n B 1 110 THR 110 545 545 THR THR B . n B 1 111 GLU 111 546 546 GLU GLU B . n B 1 112 LYS 112 547 547 LYS LYS B . n B 1 113 SER 113 548 548 SER SER B . n B 1 114 ALA 114 549 549 ALA ALA B . n B 1 115 LEU 115 550 550 LEU LEU B . n B 1 116 LEU 116 551 551 LEU LEU B . n B 1 117 GLN 117 552 552 GLN GLN B . n B 1 118 VAL 118 553 553 VAL VAL B . n B 1 119 TRP 119 554 554 TRP TRP B . n B 1 120 TYR 120 555 555 TYR TYR B . n B 1 121 ALA 121 556 556 ALA ALA B . n B 1 122 SER 122 557 557 SER SER B . n B 1 123 ASP 123 558 558 ASP ASP B . n B 1 124 LYS 124 559 559 LYS LYS B . n B 1 125 THR 125 560 560 THR THR B . n B 1 126 GLY 126 561 561 GLY GLY B . n B 1 127 LYS 127 562 562 LYS LYS B . n B 1 128 GLN 128 563 563 GLN GLN B . n B 1 129 ILE 129 564 564 ILE ILE B . n B 1 130 ASP 130 565 565 ASP ASP B . n B 1 131 PRO 131 566 566 PRO PRO B . n B 1 132 ALA 132 567 567 ALA ALA B . n B 1 133 ASP 133 568 568 ASP ASP B . n B 1 134 SER 134 569 569 SER SER B . n B 1 135 ALA 135 570 570 ALA ALA B . n B 1 136 SER 136 571 571 SER SER B . n B 1 137 GLU 137 572 572 GLU GLU B . n B 1 138 SER 138 573 573 SER SER B . n B 1 139 ILE 139 574 574 ILE ILE B . n B 1 140 GLU 140 575 575 GLU GLU B . n B 1 141 VAL 141 576 576 VAL VAL B . n B 1 142 TYR 142 577 577 TYR TYR B . n B 1 143 ILE 143 578 578 ILE ILE B . n B 1 144 PRO 144 579 579 PRO PRO B . n B 1 145 SER 145 580 580 SER SER B . n B 1 146 ALA 146 581 581 ALA ALA B . n B 1 147 SER 147 582 582 SER SER B . n B 1 148 ALA 148 583 583 ALA ALA B . n B 1 149 ASP 149 584 584 ASP ASP B . n B 1 150 GLU 150 585 585 GLU GLU B . n B 1 151 ALA 151 586 586 ALA ALA B . n B 1 152 LEU 152 587 ? ? ? B . n B 1 153 GLU 153 588 ? ? ? B . n B 1 154 HIS 154 589 ? ? ? B . n B 1 155 HIS 155 590 ? ? ? B . n B 1 156 HIS 156 591 ? ? ? B . n B 1 157 HIS 157 592 ? ? ? B . n B 1 158 HIS 158 593 ? ? ? B . n B 1 159 HIS 159 594 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.8.0073 ? 1 MOSFLM 'data reduction' . ? 2 XDS 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 4V1I _cell.length_a 132.100 _cell.length_b 132.100 _cell.length_c 104.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4V1I _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 4V1I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.57 _exptl_crystal.density_percent_sol 52 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.3 M AMMONIUM SULPHATE, 24% PEG 3350. CRYO 30% GLYCEROL IN ABOVE CONDITION, pH 7.0' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-05-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength 0.97949 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4V1I _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.14 _reflns.d_resolution_high 2.59 _reflns.number_obs 10960 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 18.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.59 _reflns_shell.d_res_low 2.66 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 1.31 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.60 _reflns_shell.pdbx_redundancy 19.6 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4V1I _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10433 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.14 _refine.ls_d_res_high 2.59 _refine.ls_percent_reflns_obs 99.63 _refine.ls_R_factor_obs 0.22882 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22745 _refine.ls_R_factor_R_free 0.25843 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 526 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.B_iso_mean 84.020 _refine.aniso_B[1][1] -3.61 _refine.aniso_B[2][2] -3.61 _refine.aniso_B[3][3] 11.70 _refine.aniso_B[1][2] -1.80 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES WITH TLS ADDED. PDB_REDO WAS USED BEFORE THE LAST ROUND OF REFMAC5 REFINEMENT ; _refine.pdbx_starting_model 'PDB ENTRY 4V18' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.791 _refine.pdbx_overall_ESU_R_Free 0.319 _refine.overall_SU_ML 0.314 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 34.543 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2264 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 2274 _refine_hist.d_res_high 2.59 _refine_hist.d_res_low 50.14 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.020 ? 2306 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2168 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.076 1.961 ? 3121 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.819 3.000 ? 5052 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.749 5.000 ? 300 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.867 27.273 ? 88 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.392 15.000 ? 409 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.061 0.200 ? 362 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 2585 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 439 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.830 4.427 ? 1202 'X-RAY DIFFRACTION' ? r_mcbond_other 0.830 4.426 ? 1201 'X-RAY DIFFRACTION' ? r_mcangle_it 1.478 6.631 ? 1499 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 0.761 4.475 ? 1102 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.592 _refine_ls_shell.d_res_low 2.659 _refine_ls_shell.number_reflns_R_work 752 _refine_ls_shell.R_factor_R_work 0.380 _refine_ls_shell.percent_reflns_obs 99.24 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 4V1I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4V1I _struct.title ;Structure of a novel carbohydrate binding module from glycoside hydrolase family 5 glucanase from Ruminococcus flavefaciens FD-1 at medium resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4V1I _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'SUGAR BINDING PROTEIN, CELLULOSOME' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4V1I _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 4V1I _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4V1I A 1 ? 159 ? 4V1I 436 ? 594 ? 436 594 2 1 4V1I B 1 ? 159 ? 4V1I 436 ? 594 ? 436 594 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3260 ? 1 MORE -9.8 ? 1 'SSA (A^2)' 14150 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 97 ? THR A 110 ? ASP A 532 THR A 545 1 ? 14 HELX_P HELX_P2 2 PRO A 131 ? SER A 134 ? PRO A 566 SER A 569 5 ? 4 HELX_P HELX_P3 3 SER A 145 ? ALA A 151 ? SER A 580 ALA A 586 1 ? 7 HELX_P HELX_P4 4 ALA B 7 ? GLY B 9 ? ALA B 442 GLY B 444 5 ? 3 HELX_P HELX_P5 5 ASP B 97 ? THR B 110 ? ASP B 532 THR B 545 1 ? 14 HELX_P HELX_P6 6 PRO B 131 ? SER B 134 ? PRO B 566 SER B 569 5 ? 4 HELX_P HELX_P7 7 SER B 145 ? GLU B 150 ? SER B 580 GLU B 585 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 130 A . ? ASP 565 A PRO 131 A ? PRO 566 A 1 -0.90 2 ASP 130 B . ? ASP 565 B PRO 131 B ? PRO 566 B 1 -2.25 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 7 ? BA ? 4 ? BB ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AB 6 7 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? anti-parallel BB 5 6 ? anti-parallel BB 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 11 ? TYR A 13 ? LYS A 446 TYR A 448 AA 2 SER A 136 ? PRO A 144 ? SER A 571 PRO A 579 AA 3 ASN A 31 ? THR A 38 ? ASN A 466 THR A 473 AA 4 ASP A 72 ? ASP A 77 ? ASP A 507 ASP A 512 AB 1 LYS A 15 ? LYS A 16 ? LYS A 450 LYS A 451 AB 2 THR A 21 ? THR A 23 ? THR A 456 THR A 458 AB 3 SER A 113 ? ASP A 123 ? SER A 548 ASP A 558 AB 4 THR A 42 ? ILE A 55 ? THR A 477 ILE A 490 AB 5 LYS A 58 ? THR A 68 ? LYS A 493 THR A 503 AB 6 GLN A 83 ? ILE A 88 ? GLN A 518 ILE A 523 AB 7 GLU A 91 ? GLU A 94 ? GLU A 526 GLU A 529 BA 1 LYS B 11 ? TYR B 13 ? LYS B 446 TYR B 448 BA 2 SER B 136 ? PRO B 144 ? SER B 571 PRO B 579 BA 3 ASN B 31 ? THR B 38 ? ASN B 466 THR B 473 BA 4 ASP B 72 ? ASP B 77 ? ASP B 507 ASP B 512 BB 1 LYS B 15 ? LYS B 16 ? LYS B 450 LYS B 451 BB 2 THR B 21 ? THR B 23 ? THR B 456 THR B 458 BB 3 SER B 113 ? ASP B 123 ? SER B 548 ASP B 558 BB 4 THR B 42 ? ILE B 55 ? THR B 477 ILE B 490 BB 5 LYS B 58 ? THR B 68 ? LYS B 493 THR B 503 BB 6 GLN B 83 ? ILE B 88 ? GLN B 518 ILE B 523 BB 7 GLU B 91 ? GLU B 94 ? GLU B 526 GLU B 529 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 12 ? N LEU A 447 O ILE A 143 ? O ILE A 578 AA 2 3 N TYR A 142 ? N TYR A 577 O PHE A 33 ? O PHE A 468 AA 3 4 N ILE A 36 ? N ILE A 471 O ASP A 72 ? O ASP A 507 AB 1 2 N LYS A 15 ? N LYS A 450 O THR A 23 ? O THR A 458 AB 2 3 N VAL A 22 ? N VAL A 457 O ALA A 114 ? O ALA A 549 AB 3 4 O SER A 122 ? O SER A 557 N GLY A 43 ? N GLY A 478 AB 4 5 N ILE A 55 ? N ILE A 490 O LYS A 58 ? O LYS A 493 AB 5 6 N ALA A 63 ? N ALA A 498 O GLN A 83 ? O GLN A 518 AB 6 7 N ILE A 88 ? N ILE A 523 O GLU A 91 ? O GLU A 526 BA 1 2 N LEU B 12 ? N LEU B 447 O ILE B 143 ? O ILE B 578 BA 2 3 N TYR B 142 ? N TYR B 577 O PHE B 33 ? O PHE B 468 BA 3 4 N ILE B 36 ? N ILE B 471 O ASP B 72 ? O ASP B 507 BB 1 2 N LYS B 15 ? N LYS B 450 O THR B 23 ? O THR B 458 BB 2 3 N VAL B 22 ? N VAL B 457 O ALA B 114 ? O ALA B 549 BB 3 4 O SER B 122 ? O SER B 557 N GLY B 43 ? N GLY B 478 BB 4 5 N ILE B 55 ? N ILE B 490 O LYS B 58 ? O LYS B 493 BB 5 6 N ALA B 63 ? N ALA B 498 O GLN B 83 ? O GLN B 518 BB 6 7 N ILE B 88 ? N ILE B 523 O GLU B 91 ? O GLU B 526 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 445 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 580 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.76 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B PRO 440 ? ? 1_555 O B PRO 440 ? ? 6_555 1.33 2 1 OE1 B GLN 528 ? ? 1_555 OE1 B GLN 528 ? ? 11_444 2.05 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 438 ? ? -4.13 -34.74 2 1 SER A 453 ? ? -75.23 -73.10 3 1 GLU A 454 ? ? -73.43 43.43 4 1 ASP A 491 ? ? 27.50 79.93 5 1 TRP A 554 ? ? -99.07 -63.26 6 1 ALA A 586 ? ? -67.25 -117.66 7 1 LEU B 438 ? ? -134.45 -31.59 8 1 SER B 453 ? ? -75.52 -72.12 9 1 GLU B 454 ? ? -74.08 43.90 10 1 ALA B 475 ? ? 141.06 -48.63 11 1 ASP B 491 ? ? 27.95 79.00 12 1 TRP B 554 ? ? -98.45 -63.65 13 1 SER B 582 ? ? -45.56 -82.41 14 1 ALA B 583 ? ? -36.63 -21.85 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -3.4970 -21.5830 -34.8710 0.2774 0.1655 0.0695 -0.0051 -0.0404 0.0810 4.3927 5.3329 1.1258 1.4888 -1.0786 -0.6628 -0.0694 -0.3575 -0.3500 0.2636 0.1230 -0.0575 -0.0356 -0.0185 -0.0536 'X-RAY DIFFRACTION' 2 ? refined 6.4650 -20.9520 -17.1740 0.7056 0.5695 0.2229 0.0242 -0.2085 0.2506 3.7555 3.9688 2.6606 0.4605 -1.2164 0.1361 0.1305 -0.6425 -0.4209 1.0446 0.1039 -0.3202 -0.0465 0.0456 -0.2344 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 437 ? ? A 587 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 437 ? ? B 586 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 436 ? A MET 1 2 1 Y 1 A GLU 588 ? A GLU 153 3 1 Y 1 A HIS 589 ? A HIS 154 4 1 Y 1 A HIS 590 ? A HIS 155 5 1 Y 1 A HIS 591 ? A HIS 156 6 1 Y 1 A HIS 592 ? A HIS 157 7 1 Y 1 A HIS 593 ? A HIS 158 8 1 Y 1 A HIS 594 ? A HIS 159 9 1 Y 1 B MET 436 ? B MET 1 10 1 Y 1 B LEU 587 ? B LEU 152 11 1 Y 1 B GLU 588 ? B GLU 153 12 1 Y 1 B HIS 589 ? B HIS 154 13 1 Y 1 B HIS 590 ? B HIS 155 14 1 Y 1 B HIS 591 ? B HIS 156 15 1 Y 1 B HIS 592 ? B HIS 157 16 1 Y 1 B HIS 593 ? B HIS 158 17 1 Y 1 B HIS 594 ? B HIS 159 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 CYS N N N N 47 CYS CA C N R 48 CYS C C N N 49 CYS O O N N 50 CYS CB C N N 51 CYS SG S N N 52 CYS OXT O N N 53 CYS H H N N 54 CYS H2 H N N 55 CYS HA H N N 56 CYS HB2 H N N 57 CYS HB3 H N N 58 CYS HG H N N 59 CYS HXT H N N 60 GLN N N N N 61 GLN CA C N S 62 GLN C C N N 63 GLN O O N N 64 GLN CB C N N 65 GLN CG C N N 66 GLN CD C N N 67 GLN OE1 O N N 68 GLN NE2 N N N 69 GLN OXT O N N 70 GLN H H N N 71 GLN H2 H N N 72 GLN HA H N N 73 GLN HB2 H N N 74 GLN HB3 H N N 75 GLN HG2 H N N 76 GLN HG3 H N N 77 GLN HE21 H N N 78 GLN HE22 H N N 79 GLN HXT H N N 80 GLU N N N N 81 GLU CA C N S 82 GLU C C N N 83 GLU O O N N 84 GLU CB C N N 85 GLU CG C N N 86 GLU CD C N N 87 GLU OE1 O N N 88 GLU OE2 O N N 89 GLU OXT O N N 90 GLU H H N N 91 GLU H2 H N N 92 GLU HA H N N 93 GLU HB2 H N N 94 GLU HB3 H N N 95 GLU HG2 H N N 96 GLU HG3 H N N 97 GLU HE2 H N N 98 GLU HXT H N N 99 GLY N N N N 100 GLY CA C N N 101 GLY C C N N 102 GLY O O N N 103 GLY OXT O N N 104 GLY H H N N 105 GLY H2 H N N 106 GLY HA2 H N N 107 GLY HA3 H N N 108 GLY HXT H N N 109 HIS N N N N 110 HIS CA C N S 111 HIS C C N N 112 HIS O O N N 113 HIS CB C N N 114 HIS CG C Y N 115 HIS ND1 N Y N 116 HIS CD2 C Y N 117 HIS CE1 C Y N 118 HIS NE2 N Y N 119 HIS OXT O N N 120 HIS H H N N 121 HIS H2 H N N 122 HIS HA H N N 123 HIS HB2 H N N 124 HIS HB3 H N N 125 HIS HD1 H N N 126 HIS HD2 H N N 127 HIS HE1 H N N 128 HIS HE2 H N N 129 HIS HXT H N N 130 HOH O O N N 131 HOH H1 H N N 132 HOH H2 H N N 133 ILE N N N N 134 ILE CA C N S 135 ILE C C N N 136 ILE O O N N 137 ILE CB C N S 138 ILE CG1 C N N 139 ILE CG2 C N N 140 ILE CD1 C N N 141 ILE OXT O N N 142 ILE H H N N 143 ILE H2 H N N 144 ILE HA H N N 145 ILE HB H N N 146 ILE HG12 H N N 147 ILE HG13 H N N 148 ILE HG21 H N N 149 ILE HG22 H N N 150 ILE HG23 H N N 151 ILE HD11 H N N 152 ILE HD12 H N N 153 ILE HD13 H N N 154 ILE HXT H N N 155 LEU N N N N 156 LEU CA C N S 157 LEU C C N N 158 LEU O O N N 159 LEU CB C N N 160 LEU CG C N N 161 LEU CD1 C N N 162 LEU CD2 C N N 163 LEU OXT O N N 164 LEU H H N N 165 LEU H2 H N N 166 LEU HA H N N 167 LEU HB2 H N N 168 LEU HB3 H N N 169 LEU HG H N N 170 LEU HD11 H N N 171 LEU HD12 H N N 172 LEU HD13 H N N 173 LEU HD21 H N N 174 LEU HD22 H N N 175 LEU HD23 H N N 176 LEU HXT H N N 177 LYS N N N N 178 LYS CA C N S 179 LYS C C N N 180 LYS O O N N 181 LYS CB C N N 182 LYS CG C N N 183 LYS CD C N N 184 LYS CE C N N 185 LYS NZ N N N 186 LYS OXT O N N 187 LYS H H N N 188 LYS H2 H N N 189 LYS HA H N N 190 LYS HB2 H N N 191 LYS HB3 H N N 192 LYS HG2 H N N 193 LYS HG3 H N N 194 LYS HD2 H N N 195 LYS HD3 H N N 196 LYS HE2 H N N 197 LYS HE3 H N N 198 LYS HZ1 H N N 199 LYS HZ2 H N N 200 LYS HZ3 H N N 201 LYS HXT H N N 202 MET N N N N 203 MET CA C N S 204 MET C C N N 205 MET O O N N 206 MET CB C N N 207 MET CG C N N 208 MET SD S N N 209 MET CE C N N 210 MET OXT O N N 211 MET H H N N 212 MET H2 H N N 213 MET HA H N N 214 MET HB2 H N N 215 MET HB3 H N N 216 MET HG2 H N N 217 MET HG3 H N N 218 MET HE1 H N N 219 MET HE2 H N N 220 MET HE3 H N N 221 MET HXT H N N 222 PHE N N N N 223 PHE CA C N S 224 PHE C C N N 225 PHE O O N N 226 PHE CB C N N 227 PHE CG C Y N 228 PHE CD1 C Y N 229 PHE CD2 C Y N 230 PHE CE1 C Y N 231 PHE CE2 C Y N 232 PHE CZ C Y N 233 PHE OXT O N N 234 PHE H H N N 235 PHE H2 H N N 236 PHE HA H N N 237 PHE HB2 H N N 238 PHE HB3 H N N 239 PHE HD1 H N N 240 PHE HD2 H N N 241 PHE HE1 H N N 242 PHE HE2 H N N 243 PHE HZ H N N 244 PHE HXT H N N 245 PRO N N N N 246 PRO CA C N S 247 PRO C C N N 248 PRO O O N N 249 PRO CB C N N 250 PRO CG C N N 251 PRO CD C N N 252 PRO OXT O N N 253 PRO H H N N 254 PRO HA H N N 255 PRO HB2 H N N 256 PRO HB3 H N N 257 PRO HG2 H N N 258 PRO HG3 H N N 259 PRO HD2 H N N 260 PRO HD3 H N N 261 PRO HXT H N N 262 SER N N N N 263 SER CA C N S 264 SER C C N N 265 SER O O N N 266 SER CB C N N 267 SER OG O N N 268 SER OXT O N N 269 SER H H N N 270 SER H2 H N N 271 SER HA H N N 272 SER HB2 H N N 273 SER HB3 H N N 274 SER HG H N N 275 SER HXT H N N 276 THR N N N N 277 THR CA C N S 278 THR C C N N 279 THR O O N N 280 THR CB C N R 281 THR OG1 O N N 282 THR CG2 C N N 283 THR OXT O N N 284 THR H H N N 285 THR H2 H N N 286 THR HA H N N 287 THR HB H N N 288 THR HG1 H N N 289 THR HG21 H N N 290 THR HG22 H N N 291 THR HG23 H N N 292 THR HXT H N N 293 TRP N N N N 294 TRP CA C N S 295 TRP C C N N 296 TRP O O N N 297 TRP CB C N N 298 TRP CG C Y N 299 TRP CD1 C Y N 300 TRP CD2 C Y N 301 TRP NE1 N Y N 302 TRP CE2 C Y N 303 TRP CE3 C Y N 304 TRP CZ2 C Y N 305 TRP CZ3 C Y N 306 TRP CH2 C Y N 307 TRP OXT O N N 308 TRP H H N N 309 TRP H2 H N N 310 TRP HA H N N 311 TRP HB2 H N N 312 TRP HB3 H N N 313 TRP HD1 H N N 314 TRP HE1 H N N 315 TRP HE3 H N N 316 TRP HZ2 H N N 317 TRP HZ3 H N N 318 TRP HH2 H N N 319 TRP HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 CYS N CA sing N N 44 CYS N H sing N N 45 CYS N H2 sing N N 46 CYS CA C sing N N 47 CYS CA CB sing N N 48 CYS CA HA sing N N 49 CYS C O doub N N 50 CYS C OXT sing N N 51 CYS CB SG sing N N 52 CYS CB HB2 sing N N 53 CYS CB HB3 sing N N 54 CYS SG HG sing N N 55 CYS OXT HXT sing N N 56 GLN N CA sing N N 57 GLN N H sing N N 58 GLN N H2 sing N N 59 GLN CA C sing N N 60 GLN CA CB sing N N 61 GLN CA HA sing N N 62 GLN C O doub N N 63 GLN C OXT sing N N 64 GLN CB CG sing N N 65 GLN CB HB2 sing N N 66 GLN CB HB3 sing N N 67 GLN CG CD sing N N 68 GLN CG HG2 sing N N 69 GLN CG HG3 sing N N 70 GLN CD OE1 doub N N 71 GLN CD NE2 sing N N 72 GLN NE2 HE21 sing N N 73 GLN NE2 HE22 sing N N 74 GLN OXT HXT sing N N 75 GLU N CA sing N N 76 GLU N H sing N N 77 GLU N H2 sing N N 78 GLU CA C sing N N 79 GLU CA CB sing N N 80 GLU CA HA sing N N 81 GLU C O doub N N 82 GLU C OXT sing N N 83 GLU CB CG sing N N 84 GLU CB HB2 sing N N 85 GLU CB HB3 sing N N 86 GLU CG CD sing N N 87 GLU CG HG2 sing N N 88 GLU CG HG3 sing N N 89 GLU CD OE1 doub N N 90 GLU CD OE2 sing N N 91 GLU OE2 HE2 sing N N 92 GLU OXT HXT sing N N 93 GLY N CA sing N N 94 GLY N H sing N N 95 GLY N H2 sing N N 96 GLY CA C sing N N 97 GLY CA HA2 sing N N 98 GLY CA HA3 sing N N 99 GLY C O doub N N 100 GLY C OXT sing N N 101 GLY OXT HXT sing N N 102 HIS N CA sing N N 103 HIS N H sing N N 104 HIS N H2 sing N N 105 HIS CA C sing N N 106 HIS CA CB sing N N 107 HIS CA HA sing N N 108 HIS C O doub N N 109 HIS C OXT sing N N 110 HIS CB CG sing N N 111 HIS CB HB2 sing N N 112 HIS CB HB3 sing N N 113 HIS CG ND1 sing Y N 114 HIS CG CD2 doub Y N 115 HIS ND1 CE1 doub Y N 116 HIS ND1 HD1 sing N N 117 HIS CD2 NE2 sing Y N 118 HIS CD2 HD2 sing N N 119 HIS CE1 NE2 sing Y N 120 HIS CE1 HE1 sing N N 121 HIS NE2 HE2 sing N N 122 HIS OXT HXT sing N N 123 HOH O H1 sing N N 124 HOH O H2 sing N N 125 ILE N CA sing N N 126 ILE N H sing N N 127 ILE N H2 sing N N 128 ILE CA C sing N N 129 ILE CA CB sing N N 130 ILE CA HA sing N N 131 ILE C O doub N N 132 ILE C OXT sing N N 133 ILE CB CG1 sing N N 134 ILE CB CG2 sing N N 135 ILE CB HB sing N N 136 ILE CG1 CD1 sing N N 137 ILE CG1 HG12 sing N N 138 ILE CG1 HG13 sing N N 139 ILE CG2 HG21 sing N N 140 ILE CG2 HG22 sing N N 141 ILE CG2 HG23 sing N N 142 ILE CD1 HD11 sing N N 143 ILE CD1 HD12 sing N N 144 ILE CD1 HD13 sing N N 145 ILE OXT HXT sing N N 146 LEU N CA sing N N 147 LEU N H sing N N 148 LEU N H2 sing N N 149 LEU CA C sing N N 150 LEU CA CB sing N N 151 LEU CA HA sing N N 152 LEU C O doub N N 153 LEU C OXT sing N N 154 LEU CB CG sing N N 155 LEU CB HB2 sing N N 156 LEU CB HB3 sing N N 157 LEU CG CD1 sing N N 158 LEU CG CD2 sing N N 159 LEU CG HG sing N N 160 LEU CD1 HD11 sing N N 161 LEU CD1 HD12 sing N N 162 LEU CD1 HD13 sing N N 163 LEU CD2 HD21 sing N N 164 LEU CD2 HD22 sing N N 165 LEU CD2 HD23 sing N N 166 LEU OXT HXT sing N N 167 LYS N CA sing N N 168 LYS N H sing N N 169 LYS N H2 sing N N 170 LYS CA C sing N N 171 LYS CA CB sing N N 172 LYS CA HA sing N N 173 LYS C O doub N N 174 LYS C OXT sing N N 175 LYS CB CG sing N N 176 LYS CB HB2 sing N N 177 LYS CB HB3 sing N N 178 LYS CG CD sing N N 179 LYS CG HG2 sing N N 180 LYS CG HG3 sing N N 181 LYS CD CE sing N N 182 LYS CD HD2 sing N N 183 LYS CD HD3 sing N N 184 LYS CE NZ sing N N 185 LYS CE HE2 sing N N 186 LYS CE HE3 sing N N 187 LYS NZ HZ1 sing N N 188 LYS NZ HZ2 sing N N 189 LYS NZ HZ3 sing N N 190 LYS OXT HXT sing N N 191 MET N CA sing N N 192 MET N H sing N N 193 MET N H2 sing N N 194 MET CA C sing N N 195 MET CA CB sing N N 196 MET CA HA sing N N 197 MET C O doub N N 198 MET C OXT sing N N 199 MET CB CG sing N N 200 MET CB HB2 sing N N 201 MET CB HB3 sing N N 202 MET CG SD sing N N 203 MET CG HG2 sing N N 204 MET CG HG3 sing N N 205 MET SD CE sing N N 206 MET CE HE1 sing N N 207 MET CE HE2 sing N N 208 MET CE HE3 sing N N 209 MET OXT HXT sing N N 210 PHE N CA sing N N 211 PHE N H sing N N 212 PHE N H2 sing N N 213 PHE CA C sing N N 214 PHE CA CB sing N N 215 PHE CA HA sing N N 216 PHE C O doub N N 217 PHE C OXT sing N N 218 PHE CB CG sing N N 219 PHE CB HB2 sing N N 220 PHE CB HB3 sing N N 221 PHE CG CD1 doub Y N 222 PHE CG CD2 sing Y N 223 PHE CD1 CE1 sing Y N 224 PHE CD1 HD1 sing N N 225 PHE CD2 CE2 doub Y N 226 PHE CD2 HD2 sing N N 227 PHE CE1 CZ doub Y N 228 PHE CE1 HE1 sing N N 229 PHE CE2 CZ sing Y N 230 PHE CE2 HE2 sing N N 231 PHE CZ HZ sing N N 232 PHE OXT HXT sing N N 233 PRO N CA sing N N 234 PRO N CD sing N N 235 PRO N H sing N N 236 PRO CA C sing N N 237 PRO CA CB sing N N 238 PRO CA HA sing N N 239 PRO C O doub N N 240 PRO C OXT sing N N 241 PRO CB CG sing N N 242 PRO CB HB2 sing N N 243 PRO CB HB3 sing N N 244 PRO CG CD sing N N 245 PRO CG HG2 sing N N 246 PRO CG HG3 sing N N 247 PRO CD HD2 sing N N 248 PRO CD HD3 sing N N 249 PRO OXT HXT sing N N 250 SER N CA sing N N 251 SER N H sing N N 252 SER N H2 sing N N 253 SER CA C sing N N 254 SER CA CB sing N N 255 SER CA HA sing N N 256 SER C O doub N N 257 SER C OXT sing N N 258 SER CB OG sing N N 259 SER CB HB2 sing N N 260 SER CB HB3 sing N N 261 SER OG HG sing N N 262 SER OXT HXT sing N N 263 THR N CA sing N N 264 THR N H sing N N 265 THR N H2 sing N N 266 THR CA C sing N N 267 THR CA CB sing N N 268 THR CA HA sing N N 269 THR C O doub N N 270 THR C OXT sing N N 271 THR CB OG1 sing N N 272 THR CB CG2 sing N N 273 THR CB HB sing N N 274 THR OG1 HG1 sing N N 275 THR CG2 HG21 sing N N 276 THR CG2 HG22 sing N N 277 THR CG2 HG23 sing N N 278 THR OXT HXT sing N N 279 TRP N CA sing N N 280 TRP N H sing N N 281 TRP N H2 sing N N 282 TRP CA C sing N N 283 TRP CA CB sing N N 284 TRP CA HA sing N N 285 TRP C O doub N N 286 TRP C OXT sing N N 287 TRP CB CG sing N N 288 TRP CB HB2 sing N N 289 TRP CB HB3 sing N N 290 TRP CG CD1 doub Y N 291 TRP CG CD2 sing Y N 292 TRP CD1 NE1 sing Y N 293 TRP CD1 HD1 sing N N 294 TRP CD2 CE2 doub Y N 295 TRP CD2 CE3 sing Y N 296 TRP NE1 CE2 sing Y N 297 TRP NE1 HE1 sing N N 298 TRP CE2 CZ2 sing Y N 299 TRP CE3 CZ3 doub Y N 300 TRP CE3 HE3 sing N N 301 TRP CZ2 CH2 doub Y N 302 TRP CZ2 HZ2 sing N N 303 TRP CZ3 CH2 sing Y N 304 TRP CZ3 HZ3 sing N N 305 TRP CH2 HH2 sing N N 306 TRP OXT HXT sing N N 307 TYR N CA sing N N 308 TYR N H sing N N 309 TYR N H2 sing N N 310 TYR CA C sing N N 311 TYR CA CB sing N N 312 TYR CA HA sing N N 313 TYR C O doub N N 314 TYR C OXT sing N N 315 TYR CB CG sing N N 316 TYR CB HB2 sing N N 317 TYR CB HB3 sing N N 318 TYR CG CD1 doub Y N 319 TYR CG CD2 sing Y N 320 TYR CD1 CE1 sing Y N 321 TYR CD1 HD1 sing N N 322 TYR CD2 CE2 doub Y N 323 TYR CD2 HD2 sing N N 324 TYR CE1 CZ doub Y N 325 TYR CE1 HE1 sing N N 326 TYR CE2 CZ sing Y N 327 TYR CE2 HE2 sing N N 328 TYR CZ OH sing N N 329 TYR OH HH sing N N 330 TYR OXT HXT sing N N 331 VAL N CA sing N N 332 VAL N H sing N N 333 VAL N H2 sing N N 334 VAL CA C sing N N 335 VAL CA CB sing N N 336 VAL CA HA sing N N 337 VAL C O doub N N 338 VAL C OXT sing N N 339 VAL CB CG1 sing N N 340 VAL CB CG2 sing N N 341 VAL CB HB sing N N 342 VAL CG1 HG11 sing N N 343 VAL CG1 HG12 sing N N 344 VAL CG1 HG13 sing N N 345 VAL CG2 HG21 sing N N 346 VAL CG2 HG22 sing N N 347 VAL CG2 HG23 sing N N 348 VAL OXT HXT sing N N 349 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4V18 _pdbx_initial_refinement_model.details 'PDB ENTRY 4V18' # _atom_sites.entry_id 4V1I _atom_sites.fract_transf_matrix[1][1] 0.007570 _atom_sites.fract_transf_matrix[1][2] 0.004371 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008741 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009600 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_