HEADER TRANSFERASE 16-OCT-14 4V35 TITLE THE STRUCTURE OF A-PGS FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALANYL-TRNA-DEPENDENT L-ALANYL- PHOPHATIDYLGLYCEROL COMPND 3 SYNTHASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SOLUBLE DOMAIN, UNP RESIDUES 543-881; COMPND 6 EC: 2.3.2.11; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 ATCC: ATCC 1569; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET52B KEYWDS TRANSFERASE, TRNA-DEPENDENT AMINOACYLATION, BACTERIAL RESISTANCE KEYWDS 2 PROTEINS, A-PGS, LIPID HOMEOSTASIS EXPDTA X-RAY DIFFRACTION AUTHOR J.KRAUSZE,S.HEBECKER,T.HASENKAMPF,D.W.HEINZ,J.MOSER REVDAT 4 08-MAY-24 4V35 1 REMARK LINK REVDAT 3 09-SEP-15 4V35 1 JRNL REVDAT 2 26-AUG-15 4V35 1 JRNL REVDAT 1 19-AUG-15 4V35 0 JRNL AUTH S.HEBECKER,J.KRAUSZE,T.HASENKAMPF,J.SCHNEIDER,M.GROENEWOLD, JRNL AUTH 2 J.REICHELT,D.JAHN,D.W.HEINZ,J.MOSER JRNL TITL STRUCTURES OF TWO BACTERIAL RESISTANCE FACTORS MEDIATING JRNL TITL 2 TRNA-DEPENDENT AMINOACYLATION OF PHOSPHATIDYLGLYCEROL WITH JRNL TITL 3 LYSINE OR ALANINE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 10691 2015 JRNL REFN ISSN 0027-8424 JRNL PMID 26261323 JRNL DOI 10.1073/PNAS.1511167112 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 33874 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6955 - 5.2353 0.98 2856 151 0.1584 0.1543 REMARK 3 2 5.2353 - 4.1684 1.00 2761 145 0.1245 0.1421 REMARK 3 3 4.1684 - 3.6452 1.00 2720 144 0.1411 0.1670 REMARK 3 4 3.6452 - 3.3137 1.00 2692 141 0.1586 0.1964 REMARK 3 5 3.3137 - 3.0771 1.00 2693 142 0.1937 0.2221 REMARK 3 6 3.0771 - 2.8963 1.00 2655 140 0.2005 0.2226 REMARK 3 7 2.8963 - 2.7516 1.00 2669 140 0.2095 0.2685 REMARK 3 8 2.7516 - 2.6321 0.99 2624 138 0.2222 0.2406 REMARK 3 9 2.6321 - 2.5310 1.00 2638 138 0.2240 0.2584 REMARK 3 10 2.5310 - 2.4439 0.99 2647 140 0.2386 0.2852 REMARK 3 11 2.4439 - 2.3676 0.99 2605 137 0.2518 0.2854 REMARK 3 12 2.3676 - 2.3000 0.99 2620 138 0.2680 0.3287 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2666 REMARK 3 ANGLE : 1.109 3599 REMARK 3 CHIRALITY : 0.042 375 REMARK 3 PLANARITY : 0.005 479 REMARK 3 DIHEDRAL : 14.507 985 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 546 THROUGH 662 ) REMARK 3 ORIGIN FOR THE GROUP (A): 218.2122 136.3000 181.4410 REMARK 3 T TENSOR REMARK 3 T11: 0.3256 T22: 0.3261 REMARK 3 T33: 0.2130 T12: -0.0391 REMARK 3 T13: -0.0167 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 3.7300 L22: 3.2192 REMARK 3 L33: 2.7246 L12: 0.2321 REMARK 3 L13: -0.5777 L23: -0.4792 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: -0.2615 S13: -0.4162 REMARK 3 S21: -0.0500 S22: -0.0060 S23: 0.1333 REMARK 3 S31: 0.4545 S32: -0.0280 S33: 0.0436 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 663 THROUGH 766 ) REMARK 3 ORIGIN FOR THE GROUP (A): 200.1263 153.5407 171.6762 REMARK 3 T TENSOR REMARK 3 T11: 0.2374 T22: 0.5985 REMARK 3 T33: 0.3268 T12: -0.0143 REMARK 3 T13: -0.0392 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 4.1875 L22: 4.1343 REMARK 3 L33: 2.8496 L12: -0.8028 REMARK 3 L13: 1.3230 L23: 0.6489 REMARK 3 S TENSOR REMARK 3 S11: 0.0661 S12: 0.2784 S13: 0.0580 REMARK 3 S21: -0.4015 S22: -0.0326 S23: 0.2755 REMARK 3 S31: 0.0160 S32: -0.5083 S33: -0.0468 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 767 THROUGH 872 ) REMARK 3 ORIGIN FOR THE GROUP (A): 217.7242 154.2904 172.2883 REMARK 3 T TENSOR REMARK 3 T11: 0.2724 T22: 0.3623 REMARK 3 T33: 0.2456 T12: -0.0259 REMARK 3 T13: -0.0522 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 3.8100 L22: 1.1853 REMARK 3 L33: 1.4455 L12: -1.0336 REMARK 3 L13: -0.7046 L23: 0.0806 REMARK 3 S TENSOR REMARK 3 S11: -0.0402 S12: 0.1369 S13: 0.3639 REMARK 3 S21: -0.1736 S22: -0.0167 S23: 0.0351 REMARK 3 S31: -0.0096 S32: -0.1271 S33: 0.0648 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4V35 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1290061265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91842 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : SAGITALLY BENT SI111 CRYSTAL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33909 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.800 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : 1.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.085 M NAAC PH 6.4, 1.6 M (NH4)2SO4, REMARK 280 20% (V/V) GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.43000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.71500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 125.14500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.43000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 125.14500 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.71500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2082 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 540 REMARK 465 PRO A 541 REMARK 465 GLY A 542 REMARK 465 ARG A 543 REMARK 465 ALA A 544 REMARK 465 ALA A 545 REMARK 465 GLY A 714 REMARK 465 GLY A 715 REMARK 465 LYS A 716 REMARK 465 GLN A 717 REMARK 465 VAL A 718 REMARK 465 ARG A 719 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LEU A 875 REMARK 465 THR A 876 REMARK 465 GLY A 877 REMARK 465 LEU A 878 REMARK 465 VAL A 879 REMARK 465 LYS A 880 REMARK 465 ARG A 881 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 562 NE CZ NH1 NH2 REMARK 470 GLU A 586 CG CD OE1 OE2 REMARK 470 ARG A 687 CD NE CZ NH1 NH2 REMARK 470 LYS A 706 CG CD CE NZ REMARK 470 LEU A 713 CG CD1 CD2 REMARK 470 LYS A 775 CG CD CE NZ REMARK 470 ARG A 811 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 838 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 586 60.04 -69.40 REMARK 500 SER A 587 -6.04 -176.87 REMARK 500 TYR A 605 173.55 63.65 REMARK 500 GLN A 636 66.79 65.51 REMARK 500 THR A 651 -166.65 -106.92 REMARK 500 PHE A 723 -86.23 44.98 REMARK 500 ASP A 765 -97.29 -129.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1873 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1874 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1875 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1876 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1877 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1878 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1879 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1880 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1881 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1882 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 1883 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1884 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1885 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1886 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1887 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4V34 RELATED DB: PDB REMARK 900 THE STRUCTURE OF A-PGS FROM PSEUDOMONAS AERUGINOSA ( SEMET REMARK 900 DERIVATIVE) REMARK 900 RELATED ID: 4V36 RELATED DB: PDB REMARK 900 THE STRUCTURE OF L-PGS FROM BACILLUS LICHENIFORMIS DBREF 4V35 A 543 881 UNP Q9I537 Q9I537_PSEAE 543 881 SEQADV 4V35 GLY A 540 UNP Q9I537 EXPRESSION TAG SEQADV 4V35 PRO A 541 UNP Q9I537 EXPRESSION TAG SEQADV 4V35 GLY A 542 UNP Q9I537 EXPRESSION TAG SEQADV 4V35 ALA A 671 UNP Q9I537 LYS 671 ENGINEERED MUTATION SEQADV 4V35 ALA A 673 UNP Q9I537 LYS 673 ENGINEERED MUTATION SEQADV 4V35 ALA A 674 UNP Q9I537 GLU 674 ENGINEERED MUTATION SEQRES 1 A 342 GLY PRO GLY ARG ALA ALA PRO PRO ALA ILE ARG GLU PRO SEQRES 2 A 342 ASN ALA GLU GLU LEU GLN ARG ALA ALA ARG ILE ILE ARG SEQRES 3 A 342 HIS SER ASP GLN PRO ASP GLY GLY LEU ALA LEU THR GLY SEQRES 4 A 342 ASP LYS ALA LEU LEU PHE HIS GLU SER ASP ASP ALA PHE SEQRES 5 A 342 LEU MET TYR ALA ARG ARG GLY ARG SER MET ILE ALA LEU SEQRES 6 A 342 TYR ASP PRO ILE GLY PRO ALA MET GLN ARG ALA GLU LEU SEQRES 7 A 342 ILE TRP GLN PHE ARG ASP LEU CYS ASP LEU HIS HIS ALA SEQRES 8 A 342 ARG PRO VAL PHE TYR GLN VAL ARG ALA GLU ASN LEU PRO SEQRES 9 A 342 PHE TYR MET ASP ILE GLY LEU THR ALA LEU LYS LEU GLY SEQRES 10 A 342 GLU GLU ALA ARG VAL ASP LEU LEU ARG PHE ASP LEU GLU SEQRES 11 A 342 ASN ALA GLY ALA ALA MET LYS ASP LEU ARG TYR THR TRP SEQRES 12 A 342 ASN ARG GLY GLN ARG ASP GLY LEU ALA LEU GLU PHE HIS SEQRES 13 A 342 GLU PRO GLY GLN ALA PRO LEU ASP GLU LEU LYS ALA ILE SEQRES 14 A 342 SER ASP ALA TRP LEU GLY GLY LYS GLN VAL ARG GLU LYS SEQRES 15 A 342 GLY PHE SER LEU GLY ARG PHE THR PRO ALA TYR LEU ASN SEQRES 16 A 342 PHE PHE ARG ILE ALA ILE VAL ARG HIS GLN GLY LYS PRO SEQRES 17 A 342 VAL ALA PHE ALA ASN LEU LEU GLU THR ASP SER ARG GLU SEQRES 18 A 342 LEU ALA SER LEU ASP LEU MET ARG VAL HIS PRO ASP ALA SEQRES 19 A 342 PRO LYS LEU THR MET GLU PHE LEU MET LEU GLY LEU ILE SEQRES 20 A 342 LEU HIS TYR LYS ALA GLN GLY HIS ALA ARG PHE SER LEU SEQRES 21 A 342 GLY MET VAL PRO LEU ALA GLY LEU GLN PRO ARG ARG GLY SEQRES 22 A 342 ALA PRO LEU THR GLN ARG LEU GLY ALA LEU VAL PHE ARG SEQRES 23 A 342 ARG GLY GLU GLN PHE TYR ASN PHE GLN GLY LEU ARG ARG SEQRES 24 A 342 PHE LYS ASP LYS PHE GLN PRO ASP TRP GLU PRO ARG TYR SEQRES 25 A 342 LEU ALA VAL PRO ALA GLY LEU ASP PRO LEU VAL ALA LEU SEQRES 26 A 342 ALA ASP THR ALA ALA LEU ILE ALA GLY GLY LEU THR GLY SEQRES 27 A 342 LEU VAL LYS ARG HET SO4 A1873 5 HET SO4 A1874 5 HET GOL A1875 6 HET GOL A1876 6 HET ACT A1877 4 HET ACT A1878 4 HET ACT A1879 4 HET ACT A1880 4 HET ACT A1881 4 HET ACT A1882 4 HET ACT A1883 4 HET CA A1884 1 HET NA A1885 1 HET CL A1886 1 HET CL A1887 1 HET GOL A1888 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 6 ACT 7(C2 H3 O2 1-) FORMUL 13 CA CA 2+ FORMUL 14 NA NA 1+ FORMUL 15 CL 2(CL 1-) FORMUL 18 HOH *111(H2 O) HELIX 1 1 ASN A 553 HIS A 566 1 14 HELIX 2 2 GLN A 569 GLY A 578 5 10 HELIX 3 3 PRO A 610 HIS A 628 1 19 HELIX 4 4 ARG A 638 GLU A 640 5 3 HELIX 5 5 ASN A 641 ILE A 648 1 8 HELIX 6 6 GLY A 672 ASP A 688 1 17 HELIX 7 7 PRO A 701 TRP A 712 1 12 HELIX 8 8 THR A 729 ASN A 734 1 6 HELIX 9 9 LEU A 776 GLN A 792 1 17 HELIX 10 10 ALA A 805 LEU A 807 5 3 HELIX 11 11 PRO A 814 ARG A 818 5 5 HELIX 12 12 ARG A 818 VAL A 823 5 6 HELIX 13 13 GLY A 835 LYS A 842 1 8 HELIX 14 14 PRO A 860 ALA A 872 1 13 SHEET 1 AA11 ALA A 581 PHE A 584 0 SHEET 2 AA11 PHE A 591 ARG A 597 -1 O LEU A 592 N LEU A 583 SHEET 3 AA11 SER A 600 LEU A 604 -1 O SER A 600 N ARG A 597 SHEET 4 AA11 ARG A 631 VAL A 637 1 O ARG A 631 N MET A 601 SHEET 5 AA11 ASP A 846 PRO A 855 -1 O TYR A 851 N VAL A 637 SHEET 6 AA11 LEU A 650 ASP A 662 -1 O THR A 651 N VAL A 854 SHEET 7 AA11 ARG A 796 PRO A 803 -1 O PHE A 797 N VAL A 661 SHEET 8 AA11 LEU A 761 VAL A 769 1 O ALA A 762 N SER A 798 SHEET 9 AA11 LYS A 746 LEU A 754 -1 O PHE A 750 N ARG A 768 SHEET 10 AA11 ARG A 737 HIS A 743 -1 O ARG A 737 N LEU A 753 SHEET 11 AA11 LEU A 690 HIS A 695 -1 O ALA A 691 N ARG A 742 SHEET 1 AB 2 ARG A 825 ARG A 826 0 SHEET 2 AB 2 GLN A 829 PHE A 830 -1 O GLN A 829 N ARG A 826 LINK OE1 GLU A 616 NA NA A1885 1555 1555 3.00 SITE 1 AC1 5 ARG A 826 TYR A 831 ASN A 832 PHE A 833 SITE 2 AC1 5 GLN A 834 SITE 1 AC2 3 ARG A 562 ARG A 565 HIS A 566 SITE 1 AC3 7 GLN A 569 ARG A 614 ARG A 638 GLU A 640 SITE 2 AC3 7 ASN A 641 HOH A2024 HOH A2050 SITE 1 AC4 3 PRO A 610 ALA A 611 ARG A 614 SITE 1 AC5 4 GLY A 827 GLU A 828 HOH A2095 HOH A2110 SITE 1 AC6 3 ALA A 548 ARG A 596 HIS A 628 SITE 1 AC7 1 ARG A 599 SITE 1 AC8 1 HOH A2067 SITE 1 AC9 4 ARG A 826 GLY A 827 GLU A 828 HOH A2111 SITE 1 BC1 2 GLN A 834 GLY A 835 SITE 1 BC2 2 PRO A 774 LYS A 775 SITE 1 BC3 1 ARG A 622 SITE 1 BC4 1 GLU A 616 SITE 1 BC5 1 ARG A 679 SITE 1 BC6 1 ARG A 737 CRYST1 94.180 94.180 166.860 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010618 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005993 0.00000