HEADER PROTEIN TRANSPORT 14-AUG-14 4W4J TITLE CRYSTAL STRUCTURE OF ESPG3 FROM THE ESX-3 TYPE VII SECRETION SYSTEM OF TITLE 2 M. SMEGMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESPG3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 STRAIN: ATCC 700084 / MC(2)155; SOURCE 5 GENE: MSMEG_0622, MSMEI_0606; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 (BL21); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS SIGNAL RECOGNITION, VIRULENCE FACTOR, PROTEIN SECRETION, ADAPTOR, KEYWDS 2 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR D.C.EKIERT,J.S.COX REVDAT 6 27-DEC-23 4W4J 1 REMARK REVDAT 5 11-DEC-19 4W4J 1 REMARK REVDAT 4 27-SEP-17 4W4J 1 SOURCE KEYWDS JRNL REMARK REVDAT 3 29-OCT-14 4W4J 1 JRNL REVDAT 2 15-OCT-14 4W4J 1 JRNL REVDAT 1 01-OCT-14 4W4J 0 JRNL AUTH D.C.EKIERT,J.S.COX JRNL TITL STRUCTURE OF A PE-PPE-ESPG COMPLEX FROM MYCOBACTERIUM JRNL TITL 2 TUBERCULOSIS REVEALS MOLECULAR SPECIFICITY OF ESX PROTEIN JRNL TITL 3 SECRETION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 14758 2014 JRNL REFN ESSN 1091-6490 JRNL PMID 25275011 JRNL DOI 10.1073/PNAS.1409345111 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1727) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2271 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6118 - 7.0559 1.00 1402 153 0.1746 0.2048 REMARK 3 2 7.0559 - 5.6033 1.00 1302 151 0.2106 0.2616 REMARK 3 3 5.6033 - 4.8958 1.00 1304 140 0.1757 0.2143 REMARK 3 4 4.8958 - 4.4486 1.00 1297 144 0.1487 0.1919 REMARK 3 5 4.4486 - 4.1299 1.00 1251 145 0.1619 0.2188 REMARK 3 6 4.1299 - 3.8865 1.00 1303 141 0.1837 0.2111 REMARK 3 7 3.8865 - 3.6920 1.00 1265 140 0.1884 0.2654 REMARK 3 8 3.6920 - 3.5313 1.00 1276 142 0.2048 0.2405 REMARK 3 9 3.5313 - 3.3954 1.00 1252 136 0.2006 0.2538 REMARK 3 10 3.3954 - 3.2783 1.00 1259 146 0.2185 0.2838 REMARK 3 11 3.2783 - 3.1758 1.00 1248 135 0.2177 0.2750 REMARK 3 12 3.1758 - 3.0850 1.00 1276 143 0.2036 0.2458 REMARK 3 13 3.0850 - 3.0038 1.00 1272 141 0.2260 0.2813 REMARK 3 14 3.0038 - 2.9306 1.00 1256 137 0.2551 0.3196 REMARK 3 15 2.9306 - 2.8639 1.00 1245 138 0.3121 0.3435 REMARK 3 16 2.8639 - 2.8030 1.00 1241 139 0.3694 0.4405 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4188 REMARK 3 ANGLE : 1.401 5732 REMARK 3 CHIRALITY : 0.059 650 REMARK 3 PLANARITY : 0.008 751 REMARK 3 DIHEDRAL : 13.483 1486 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.2186 50.3536 175.1453 REMARK 3 T TENSOR REMARK 3 T11: 0.3427 T22: 0.8186 REMARK 3 T33: 0.4510 T12: 0.0257 REMARK 3 T13: 0.0244 T23: 0.1010 REMARK 3 L TENSOR REMARK 3 L11: 1.9976 L22: 1.4656 REMARK 3 L33: 2.6936 L12: -0.4034 REMARK 3 L13: 0.4784 L23: -0.1082 REMARK 3 S TENSOR REMARK 3 S11: -0.1200 S12: -0.0854 S13: -0.2879 REMARK 3 S21: -0.3601 S22: -0.4814 S23: -0.3915 REMARK 3 S31: 0.2805 S32: 1.1239 S33: -0.5820 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9033 51.0961 182.1593 REMARK 3 T TENSOR REMARK 3 T11: 0.3024 T22: 0.7167 REMARK 3 T33: 0.3927 T12: 0.0196 REMARK 3 T13: -0.0397 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 0.6234 L22: 1.7284 REMARK 3 L33: 1.1609 L12: -0.7961 REMARK 3 L13: 0.2354 L23: -0.5839 REMARK 3 S TENSOR REMARK 3 S11: 0.1578 S12: -0.4121 S13: 0.2042 REMARK 3 S21: -0.0053 S22: -0.0522 S23: 0.0357 REMARK 3 S31: 0.0142 S32: -0.0734 S33: -0.0064 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5712 26.5645 187.5284 REMARK 3 T TENSOR REMARK 3 T11: 0.4702 T22: 0.7484 REMARK 3 T33: 0.8472 T12: -0.1182 REMARK 3 T13: -0.0983 T23: -0.1244 REMARK 3 L TENSOR REMARK 3 L11: 0.3492 L22: 0.5843 REMARK 3 L33: 3.7830 L12: 0.2320 REMARK 3 L13: -0.9251 L23: -1.2999 REMARK 3 S TENSOR REMARK 3 S11: 0.0668 S12: -0.6688 S13: -1.0054 REMARK 3 S21: -0.2508 S22: -0.4157 S23: 0.0180 REMARK 3 S31: 1.1868 S32: 0.1789 S33: -0.2724 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2701 42.7171 193.6959 REMARK 3 T TENSOR REMARK 3 T11: 0.1861 T22: 0.8339 REMARK 3 T33: 0.4117 T12: 0.0138 REMARK 3 T13: -0.0358 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 2.8500 L22: 2.5973 REMARK 3 L33: 1.2231 L12: 0.6904 REMARK 3 L13: -0.7956 L23: 1.2799 REMARK 3 S TENSOR REMARK 3 S11: 0.0519 S12: -0.8639 S13: -0.1476 REMARK 3 S21: 0.3589 S22: -0.0212 S23: 0.3223 REMARK 3 S31: -0.0477 S32: -0.0689 S33: 0.3951 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2701 62.9639 216.6604 REMARK 3 T TENSOR REMARK 3 T11: 1.0436 T22: 1.1740 REMARK 3 T33: 1.3267 T12: 0.1446 REMARK 3 T13: 0.3672 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 0.1872 L22: 0.3154 REMARK 3 L33: 0.2420 L12: -0.1901 REMARK 3 L13: -0.1998 L23: 0.0065 REMARK 3 S TENSOR REMARK 3 S11: -0.2222 S12: -0.1403 S13: 0.2895 REMARK 3 S21: 0.5795 S22: 0.6575 S23: 0.3028 REMARK 3 S31: -0.1411 S32: -1.0228 S33: -0.0007 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4973 70.9263 222.3570 REMARK 3 T TENSOR REMARK 3 T11: 1.6610 T22: 1.4098 REMARK 3 T33: 2.0368 T12: -0.0787 REMARK 3 T13: 0.6561 T23: -0.1847 REMARK 3 L TENSOR REMARK 3 L11: 0.6804 L22: 0.0166 REMARK 3 L33: 0.8797 L12: -0.1036 REMARK 3 L13: 0.7710 L23: -0.1277 REMARK 3 S TENSOR REMARK 3 S11: 0.5430 S12: -1.2647 S13: -0.1460 REMARK 3 S21: 0.0752 S22: 0.6658 S23: 0.1540 REMARK 3 S31: -0.4695 S32: -1.4135 S33: 0.1087 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2535 61.3249 208.7353 REMARK 3 T TENSOR REMARK 3 T11: 0.5498 T22: 0.9571 REMARK 3 T33: 0.8203 T12: -0.0326 REMARK 3 T13: 0.1580 T23: -0.1181 REMARK 3 L TENSOR REMARK 3 L11: 0.8943 L22: 1.4965 REMARK 3 L33: 1.8365 L12: 0.2171 REMARK 3 L13: -0.8202 L23: -0.8348 REMARK 3 S TENSOR REMARK 3 S11: 0.0863 S12: 0.1422 S13: 0.5463 REMARK 3 S21: 0.1364 S22: 0.1852 S23: 0.2024 REMARK 3 S31: -0.4807 S32: 0.4787 S33: -0.0148 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 146 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0436 38.6214 219.6194 REMARK 3 T TENSOR REMARK 3 T11: 0.3707 T22: 1.6224 REMARK 3 T33: 0.4934 T12: -0.2873 REMARK 3 T13: -0.1412 T23: 0.3143 REMARK 3 L TENSOR REMARK 3 L11: 1.9895 L22: 2.2177 REMARK 3 L33: 2.1278 L12: 0.4317 REMARK 3 L13: 0.4096 L23: 1.8463 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: -0.7179 S13: -0.3522 REMARK 3 S21: 0.4938 S22: -0.3305 S23: 0.0754 REMARK 3 S31: 0.3118 S32: 0.5101 S33: -1.0982 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5946 46.7675 204.1712 REMARK 3 T TENSOR REMARK 3 T11: 0.2858 T22: 1.1065 REMARK 3 T33: 0.5163 T12: -0.1247 REMARK 3 T13: 0.0662 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 1.7804 L22: 0.8546 REMARK 3 L33: 1.5699 L12: -0.1301 REMARK 3 L13: 0.0291 L23: -0.5136 REMARK 3 S TENSOR REMARK 3 S11: 0.4988 S12: -0.4185 S13: -0.2922 REMARK 3 S21: -0.1889 S22: -0.1569 S23: -0.1557 REMARK 3 S31: 0.2193 S32: 0.4296 S33: 1.1822 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4W4J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000202786. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980,0.957 REMARK 200 MONOCHROMATOR : DOUBLE FLAT CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22760 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 21.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15000 REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 22.50 REMARK 200 R MERGE FOR SHELL (I) : 3.15000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M PHOSPHATE REMARK 280 -CITRATE PH 4.2, 10% (V/V) ISOPROPANOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 114.36000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.18000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.18000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 114.36000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 GLU A -9 REMARK 465 ASN A -8 REMARK 465 LEU A -7 REMARK 465 TYR A -6 REMARK 465 PHE A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 PRO A 265 REMARK 465 ASP A 266 REMARK 465 GLN A 267 REMARK 465 PRO A 268 REMARK 465 LEU A 269 REMARK 465 THR A 270 REMARK 465 ARG A 271 REMARK 465 ASP A 272 REMARK 465 PHE A 273 REMARK 465 ASP A 274 REMARK 465 GLU A 275 REMARK 465 ASP A 276 REMARK 465 ALA A 277 REMARK 465 ALA A 278 REMARK 465 THR A 279 REMARK 465 HIS A 280 REMARK 465 ARG A 281 REMARK 465 GLU A 282 REMARK 465 PRO A 283 REMARK 465 VAL A 284 REMARK 465 LEU A 285 REMARK 465 GLN A 286 REMARK 465 ARG A 287 REMARK 465 ARG A 288 REMARK 465 THR A 289 REMARK 465 GLN A 290 REMARK 465 LYS A 291 REMARK 465 ALA A 292 REMARK 465 MSE B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 GLU B -9 REMARK 465 ASN B -8 REMARK 465 LEU B -7 REMARK 465 TYR B -6 REMARK 465 PHE B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MSE B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 265 REMARK 465 ASP B 266 REMARK 465 GLN B 267 REMARK 465 PRO B 268 REMARK 465 LEU B 269 REMARK 465 THR B 270 REMARK 465 ARG B 271 REMARK 465 ASP B 272 REMARK 465 PHE B 273 REMARK 465 ASP B 274 REMARK 465 GLU B 275 REMARK 465 ASP B 276 REMARK 465 ALA B 277 REMARK 465 ALA B 278 REMARK 465 THR B 279 REMARK 465 HIS B 280 REMARK 465 ARG B 281 REMARK 465 GLU B 282 REMARK 465 PRO B 283 REMARK 465 VAL B 284 REMARK 465 LEU B 285 REMARK 465 GLN B 286 REMARK 465 ARG B 287 REMARK 465 ARG B 288 REMARK 465 THR B 289 REMARK 465 GLN B 290 REMARK 465 LYS B 291 REMARK 465 ALA B 292 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 264 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 102 -11.26 75.76 REMARK 500 ALA A 111 -111.75 53.53 REMARK 500 GLU B 102 -15.40 75.40 REMARK 500 ALA B 111 -117.63 53.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG B 100 SER B 101 -134.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4W4I RELATED DB: PDB REMARK 900 RELATED ID: 4W4K RELATED DB: PDB REMARK 900 RELATED ID: 4W4L RELATED DB: PDB DBREF 4W4J A 0 292 UNP A0QQ45 A0QQ45_MYCS2 1 293 DBREF 4W4J B 0 292 UNP A0QQ45 A0QQ45_MYCS2 1 293 SEQADV 4W4J MSE A -16 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -15 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -14 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -13 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -12 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -11 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -10 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLU A -9 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J ASN A -8 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J LEU A -7 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J TYR A -6 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J PHE A -5 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLN A -4 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLY A -3 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J SER A -2 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS A -1 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J MSE B -16 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -15 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -14 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -13 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -12 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -11 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -10 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLU B -9 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J ASN B -8 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J LEU B -7 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J TYR B -6 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J PHE B -5 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLN B -4 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J GLY B -3 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J SER B -2 UNP A0QQ45 EXPRESSION TAG SEQADV 4W4J HIS B -1 UNP A0QQ45 EXPRESSION TAG SEQRES 1 A 309 MSE HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 A 309 GLY SER HIS MSE GLY PRO ASN ALA VAL GLU LEU THR THR SEQRES 3 A 309 ASP GLN ALA TRP CYS LEU ALA ASP VAL LEU GLY ALA GLY SEQRES 4 A 309 SER TYR PRO TRP VAL LEU ALA ILE THR PRO PRO TYR SER SEQRES 5 A 309 ASP HIS SER GLN ARG SER ALA PHE LEU ALA ALA GLN SER SEQRES 6 A 309 ALA GLU LEU THR ARG MSE GLY VAL VAL ASN SER ALA GLY SEQRES 7 A 309 ALA VAL ASP PRO ARG VAL ALA GLN TRP ILE THR THR VAL SEQRES 8 A 309 CYS ARG ALA THR GLN TRP LEU ASP LEU ARG PHE VAL SER SEQRES 9 A 309 GLY PRO GLY ASP LEU LEU ARG GLY MSE VAL ALA ARG ARG SEQRES 10 A 309 SER GLU GLU THR VAL VAL ALA LEU ARG ASN ALA GLN LEU SEQRES 11 A 309 VAL THR PHE THR ALA MSE ASP ILE GLY HIS GLN HIS ALA SEQRES 12 A 309 LEU VAL PRO VAL LEU THR ALA GLY LEU SER GLY ARG LYS SEQRES 13 A 309 PRO ALA ARG PHE ASP ASP PHE ALA LEU PRO ALA ALA ALA SEQRES 14 A 309 GLY ALA ARG ALA ASP GLU GLN ILE ARG ASN GLY ALA PRO SEQRES 15 A 309 LEU ALA GLU VAL LEU GLU PHE LEU GLY VAL PRO PRO SER SEQRES 16 A 309 ALA ARG PRO LEU VAL GLU SER VAL PHE ASP GLY ARG ARG SEQRES 17 A 309 THR TYR VAL GLU ILE VAL ALA GLY GLU HIS ARG ASP GLY SEQRES 18 A 309 HIS ARG VAL THR THR GLU VAL GLY VAL SER ILE ILE ASP SEQRES 19 A 309 THR PRO HIS GLY ARG ILE LEU VAL HIS PRO THR LYS ALA SEQRES 20 A 309 PHE ASP GLY GLU TRP ILE SER THR PHE THR PRO GLY SER SEQRES 21 A 309 ALA ASP ALA ILE ALA MSE ALA VAL GLU ARG LEU THR ALA SEQRES 22 A 309 SER LEU PRO SER GLY SER TRP PHE PRO ASP GLN PRO LEU SEQRES 23 A 309 THR ARG ASP PHE ASP GLU ASP ALA ALA THR HIS ARG GLU SEQRES 24 A 309 PRO VAL LEU GLN ARG ARG THR GLN LYS ALA SEQRES 1 B 309 MSE HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 B 309 GLY SER HIS MSE GLY PRO ASN ALA VAL GLU LEU THR THR SEQRES 3 B 309 ASP GLN ALA TRP CYS LEU ALA ASP VAL LEU GLY ALA GLY SEQRES 4 B 309 SER TYR PRO TRP VAL LEU ALA ILE THR PRO PRO TYR SER SEQRES 5 B 309 ASP HIS SER GLN ARG SER ALA PHE LEU ALA ALA GLN SER SEQRES 6 B 309 ALA GLU LEU THR ARG MSE GLY VAL VAL ASN SER ALA GLY SEQRES 7 B 309 ALA VAL ASP PRO ARG VAL ALA GLN TRP ILE THR THR VAL SEQRES 8 B 309 CYS ARG ALA THR GLN TRP LEU ASP LEU ARG PHE VAL SER SEQRES 9 B 309 GLY PRO GLY ASP LEU LEU ARG GLY MSE VAL ALA ARG ARG SEQRES 10 B 309 SER GLU GLU THR VAL VAL ALA LEU ARG ASN ALA GLN LEU SEQRES 11 B 309 VAL THR PHE THR ALA MSE ASP ILE GLY HIS GLN HIS ALA SEQRES 12 B 309 LEU VAL PRO VAL LEU THR ALA GLY LEU SER GLY ARG LYS SEQRES 13 B 309 PRO ALA ARG PHE ASP ASP PHE ALA LEU PRO ALA ALA ALA SEQRES 14 B 309 GLY ALA ARG ALA ASP GLU GLN ILE ARG ASN GLY ALA PRO SEQRES 15 B 309 LEU ALA GLU VAL LEU GLU PHE LEU GLY VAL PRO PRO SER SEQRES 16 B 309 ALA ARG PRO LEU VAL GLU SER VAL PHE ASP GLY ARG ARG SEQRES 17 B 309 THR TYR VAL GLU ILE VAL ALA GLY GLU HIS ARG ASP GLY SEQRES 18 B 309 HIS ARG VAL THR THR GLU VAL GLY VAL SER ILE ILE ASP SEQRES 19 B 309 THR PRO HIS GLY ARG ILE LEU VAL HIS PRO THR LYS ALA SEQRES 20 B 309 PHE ASP GLY GLU TRP ILE SER THR PHE THR PRO GLY SER SEQRES 21 B 309 ALA ASP ALA ILE ALA MSE ALA VAL GLU ARG LEU THR ALA SEQRES 22 B 309 SER LEU PRO SER GLY SER TRP PHE PRO ASP GLN PRO LEU SEQRES 23 B 309 THR ARG ASP PHE ASP GLU ASP ALA ALA THR HIS ARG GLU SEQRES 24 B 309 PRO VAL LEU GLN ARG ARG THR GLN LYS ALA MODRES 4W4J MSE A 0 MET MODIFIED RESIDUE MODRES 4W4J MSE A 54 MET MODIFIED RESIDUE MODRES 4W4J MSE A 96 MET MODIFIED RESIDUE MODRES 4W4J MSE A 119 MET MODIFIED RESIDUE MODRES 4W4J MSE A 249 MET MODIFIED RESIDUE MODRES 4W4J MSE B 54 MET MODIFIED RESIDUE MODRES 4W4J MSE B 96 MET MODIFIED RESIDUE MODRES 4W4J MSE B 119 MET MODIFIED RESIDUE MODRES 4W4J MSE B 249 MET MODIFIED RESIDUE HET MSE A 0 16 HET MSE A 54 8 HET MSE A 96 8 HET MSE A 119 8 HET MSE A 249 16 HET MSE B 54 8 HET MSE B 96 8 HET MSE B 119 8 HET MSE B 249 16 HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 SO4 3(O4 S 2-) HELIX 1 AA1 THR A 9 GLY A 20 1 12 HELIX 2 AA2 PRO A 25 ALA A 29 5 5 HELIX 3 AA3 ASP A 36 MSE A 54 1 19 HELIX 4 AA4 ASP A 64 ARG A 76 1 13 HELIX 5 AA5 ALA A 126 ALA A 133 1 8 HELIX 6 AA6 ALA A 150 ASN A 162 1 13 HELIX 7 AA7 PRO A 165 GLY A 174 1 10 HELIX 8 AA8 ALA A 179 PHE A 187 1 9 HELIX 9 AA9 SER A 243 SER A 257 1 15 HELIX 10 AB1 THR B 9 GLY B 20 1 12 HELIX 11 AB2 PRO B 25 ALA B 29 5 5 HELIX 12 AB3 ASP B 36 MSE B 54 1 19 HELIX 13 AB4 ASP B 64 ARG B 76 1 13 HELIX 14 AB5 LEU B 127 THR B 132 1 6 HELIX 15 AB6 ALA B 150 ASN B 162 1 13 HELIX 16 AB7 PRO B 165 GLY B 174 1 10 HELIX 17 AB8 ALA B 179 PHE B 187 1 9 HELIX 18 AB9 SER B 243 SER B 257 1 15 SHEET 1 AA110 ALA A 4 THR A 8 0 SHEET 2 AA110 LEU A 113 ALA A 118 -1 O VAL A 114 N LEU A 7 SHEET 3 AA110 GLU A 103 ASN A 110 -1 N VAL A 106 O THR A 117 SHEET 4 AA110 ASP A 91 ARG A 100 -1 N ALA A 98 O VAL A 105 SHEET 5 AA110 GLN A 79 SER A 87 -1 N PHE A 85 O LEU A 93 SHEET 6 AA110 THR A 192 ARG A 202 -1 O VAL A 197 N ASP A 82 SHEET 7 AA110 VAL A 213 THR A 218 -1 O VAL A 213 N ILE A 196 SHEET 8 AA110 GLY A 221 LYS A 229 -1 O VAL A 225 N SER A 214 SHEET 9 AA110 TRP A 235 PRO A 241 -1 O ILE A 236 N THR A 228 SHEET 10 AA110 PHE A 146 PRO A 149 -1 N PHE A 146 O PHE A 239 SHEET 1 AA2 7 ALA A 4 THR A 8 0 SHEET 2 AA2 7 LEU A 113 ALA A 118 -1 O VAL A 114 N LEU A 7 SHEET 3 AA2 7 GLU A 103 ASN A 110 -1 N VAL A 106 O THR A 117 SHEET 4 AA2 7 ASP A 91 ARG A 100 -1 N ALA A 98 O VAL A 105 SHEET 5 AA2 7 GLN A 79 SER A 87 -1 N PHE A 85 O LEU A 93 SHEET 6 AA2 7 THR A 192 ARG A 202 -1 O VAL A 197 N ASP A 82 SHEET 7 AA2 7 HIS A 205 THR A 208 -1 O VAL A 207 N GLU A 200 SHEET 1 AA310 ALA B 4 THR B 8 0 SHEET 2 AA310 LEU B 113 ALA B 118 -1 O PHE B 116 N VAL B 5 SHEET 3 AA310 GLU B 103 ASN B 110 -1 N VAL B 106 O THR B 117 SHEET 4 AA310 LEU B 92 ARG B 100 -1 N ALA B 98 O VAL B 105 SHEET 5 AA310 GLN B 79 VAL B 86 -1 N PHE B 85 O LEU B 93 SHEET 6 AA310 THR B 192 ARG B 202 -1 O TYR B 193 N VAL B 86 SHEET 7 AA310 VAL B 213 THR B 218 -1 O VAL B 213 N ILE B 196 SHEET 8 AA310 GLY B 221 LYS B 229 -1 O ILE B 223 N ILE B 216 SHEET 9 AA310 TRP B 235 PRO B 241 -1 O THR B 240 N LEU B 224 SHEET 10 AA310 PHE B 146 PRO B 149 -1 N LEU B 148 O SER B 237 SHEET 1 AA4 7 ALA B 4 THR B 8 0 SHEET 2 AA4 7 LEU B 113 ALA B 118 -1 O PHE B 116 N VAL B 5 SHEET 3 AA4 7 GLU B 103 ASN B 110 -1 N VAL B 106 O THR B 117 SHEET 4 AA4 7 LEU B 92 ARG B 100 -1 N ALA B 98 O VAL B 105 SHEET 5 AA4 7 GLN B 79 VAL B 86 -1 N PHE B 85 O LEU B 93 SHEET 6 AA4 7 THR B 192 ARG B 202 -1 O TYR B 193 N VAL B 86 SHEET 7 AA4 7 HIS B 205 THR B 208 -1 O VAL B 207 N GLU B 200 LINK C AHIS A -1 N AMSE A 0 1555 1555 1.33 LINK C BHIS A -1 N BMSE A 0 1555 1555 1.33 LINK C AMSE A 0 N GLY A 1 1555 1555 1.33 LINK C BMSE A 0 N GLY A 1 1555 1555 1.33 LINK C ARG A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N GLY A 55 1555 1555 1.33 LINK C GLY A 95 N MSE A 96 1555 1555 1.33 LINK C MSE A 96 N VAL A 97 1555 1555 1.33 LINK C ALA A 118 N MSE A 119 1555 1555 1.33 LINK C MSE A 119 N ASP A 120 1555 1555 1.34 LINK C ALA A 248 N AMSE A 249 1555 1555 1.33 LINK C ALA A 248 N BMSE A 249 1555 1555 1.33 LINK C AMSE A 249 N ALA A 250 1555 1555 1.33 LINK C BMSE A 249 N ALA A 250 1555 1555 1.33 LINK C ARG B 53 N MSE B 54 1555 1555 1.33 LINK C MSE B 54 N GLY B 55 1555 1555 1.33 LINK C GLY B 95 N MSE B 96 1555 1555 1.33 LINK C MSE B 96 N VAL B 97 1555 1555 1.33 LINK C ALA B 118 N MSE B 119 1555 1555 1.33 LINK C MSE B 119 N ASP B 120 1555 1555 1.33 LINK C ALA B 248 N AMSE B 249 1555 1555 1.33 LINK C ALA B 248 N BMSE B 249 1555 1555 1.33 LINK C AMSE B 249 N ALA B 250 1555 1555 1.33 LINK C BMSE B 249 N ALA B 250 1555 1555 1.33 SITE 1 AC1 7 HIS A 201 ARG A 202 ASP A 203 GLY A 204 SITE 2 AC1 7 GLU B 210 LYS B 229 TRP B 235 SITE 1 AC2 5 LYS A 229 TRP A 235 HIS B 201 ASP B 203 SITE 2 AC2 5 GLY B 204 SITE 1 AC3 5 HIS A -1 ARG A 66 TRP A 70 GLU A 103 SITE 2 AC3 5 ALA A 118 CRYST1 95.210 95.210 171.540 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010503 0.006064 0.000000 0.00000 SCALE2 0.000000 0.012128 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005830 0.00000