HEADER VIRAL PROTEIN 19-AUG-14 4W60 TITLE THE STRUCTURE OF VACCINA VIRUS H7 PROTEIN DISPLAYS A NOVEL TITLE 2 PHOSPHOINOSITIDE BINDING FOLD REQUIRED FOR MEMBRANE BIOGENESIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LATE PROTEIN H7; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PROTEIN H8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS; SOURCE 3 ORGANISM_COMMON: VACV; SOURCE 4 ORGANISM_TAXID: 10254; SOURCE 5 STRAIN: WESTERN RESERVE; SOURCE 6 GENE: VACWR105, H7R; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOPHOINOSITIDE BINDING, PI3P PI4P, POXVIRUS, MEMBRANE BIOGENESIS, KEYWDS 2 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KOLLI,X.MENG,X.WU,D.SHENGJULER,C.E.CAMERON,Y.XIANG,J.DENG REVDAT 6 06-NOV-24 4W60 1 REMARK REVDAT 5 27-DEC-23 4W60 1 REMARK REVDAT 4 11-DEC-19 4W60 1 REMARK REVDAT 3 13-SEP-17 4W60 1 SOURCE JRNL REMARK REVDAT 2 04-FEB-15 4W60 1 JRNL REVDAT 1 31-DEC-14 4W60 0 JRNL AUTH S.KOLLI,X.MENG,X.WU,D.SHENGJULER,C.E.CAMERON,Y.XIANG,J.DENG JRNL TITL STRUCTURE-FUNCTION ANALYSIS OF VACCINIA VIRUS H7 PROTEIN JRNL TITL 2 REVEALS A NOVEL PHOSPHOINOSITIDE BINDING FOLD ESSENTIAL FOR JRNL TITL 3 POXVIRUS REPLICATION. JRNL REF J.VIROL. V. 89 2209 2015 JRNL REFN ESSN 1098-5514 JRNL PMID 25473060 JRNL DOI 10.1128/JVI.03073-14 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.4_486) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 18426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.260 REMARK 3 R VALUE (WORKING SET) : 0.256 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0513 - 5.8190 0.99 1789 198 0.2263 0.2957 REMARK 3 2 5.8190 - 4.6199 1.00 1725 191 0.2079 0.2198 REMARK 3 3 4.6199 - 4.0363 1.00 1698 189 0.1806 0.2217 REMARK 3 4 4.0363 - 3.6674 1.00 1675 185 0.2343 0.3183 REMARK 3 5 3.6674 - 3.4046 1.00 1667 185 0.2690 0.2972 REMARK 3 6 3.4046 - 3.2039 1.00 1677 187 0.2769 0.3352 REMARK 3 7 3.2039 - 3.0435 1.00 1658 184 0.3073 0.3590 REMARK 3 8 3.0435 - 2.9110 1.00 1660 185 0.3353 0.3930 REMARK 3 9 2.9110 - 2.7990 0.95 1579 175 0.3425 0.3384 REMARK 3 10 2.7990 - 2.7024 0.88 1457 162 0.3733 0.4173 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 13.08 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.22720 REMARK 3 B22 (A**2) : 0.27150 REMARK 3 B33 (A**2) : 0.95570 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3822 REMARK 3 ANGLE : 1.170 5121 REMARK 3 CHIRALITY : 0.067 575 REMARK 3 PLANARITY : 0.005 642 REMARK 3 DIHEDRAL : 13.664 1469 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 3:116 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 3:116 ) REMARK 3 ATOM PAIRS NUMBER : 924 REMARK 3 RMSD : 0.043 REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 3:116 ) REMARK 3 SELECTION : CHAIN C AND (RESSEQ 3:116 ) REMARK 3 ATOM PAIRS NUMBER : 924 REMARK 3 RMSD : 0.055 REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 3:116 ) REMARK 3 SELECTION : CHAIN D AND (RESSEQ 3:116 ) REMARK 3 ATOM PAIRS NUMBER : 908 REMARK 3 RMSD : 0.043 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4W60 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203246. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18495 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08M BIS-TRIS PHOSPHATE/CITRIC ACID, REMARK 280 PH8.8, 18% (W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 59.35700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.02400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 59.35700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.02400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 465 SER A 118 REMARK 465 ASP A 119 REMARK 465 THR A 120 REMARK 465 ARG A 121 REMARK 465 ILE A 122 REMARK 465 SER A 123 REMARK 465 ARG A 124 REMARK 465 ASP A 125 REMARK 465 THR A 126 REMARK 465 GLU A 127 REMARK 465 LYS A 128 REMARK 465 LEU A 129 REMARK 465 LYS A 130 REMARK 465 ILE A 131 REMARK 465 ALA A 132 REMARK 465 LEU A 133 REMARK 465 ALA A 134 REMARK 465 LYS A 135 REMARK 465 GLY A 136 REMARK 465 ILE A 137 REMARK 465 ASP A 138 REMARK 465 TYR A 139 REMARK 465 GLU A 140 REMARK 465 TYR A 141 REMARK 465 ILE A 142 REMARK 465 LYS A 143 REMARK 465 ASP A 144 REMARK 465 ALA A 145 REMARK 465 CYS A 146 REMARK 465 HIS B 0 REMARK 465 ARG B 117 REMARK 465 SER B 118 REMARK 465 ASP B 119 REMARK 465 THR B 120 REMARK 465 ARG B 121 REMARK 465 ILE B 122 REMARK 465 SER B 123 REMARK 465 ARG B 124 REMARK 465 ASP B 125 REMARK 465 THR B 126 REMARK 465 GLU B 127 REMARK 465 LYS B 128 REMARK 465 LEU B 129 REMARK 465 LYS B 130 REMARK 465 ILE B 131 REMARK 465 ALA B 132 REMARK 465 LEU B 133 REMARK 465 ALA B 134 REMARK 465 LYS B 135 REMARK 465 GLY B 136 REMARK 465 ILE B 137 REMARK 465 ASP B 138 REMARK 465 TYR B 139 REMARK 465 GLU B 140 REMARK 465 TYR B 141 REMARK 465 ILE B 142 REMARK 465 LYS B 143 REMARK 465 ASP B 144 REMARK 465 ALA B 145 REMARK 465 CYS B 146 REMARK 465 HIS C 0 REMARK 465 ARG C 117 REMARK 465 SER C 118 REMARK 465 ASP C 119 REMARK 465 THR C 120 REMARK 465 ARG C 121 REMARK 465 ILE C 122 REMARK 465 SER C 123 REMARK 465 ARG C 124 REMARK 465 ASP C 125 REMARK 465 THR C 126 REMARK 465 GLU C 127 REMARK 465 LYS C 128 REMARK 465 LEU C 129 REMARK 465 LYS C 130 REMARK 465 ILE C 131 REMARK 465 ALA C 132 REMARK 465 LEU C 133 REMARK 465 ALA C 134 REMARK 465 LYS C 135 REMARK 465 GLY C 136 REMARK 465 ILE C 137 REMARK 465 ASP C 138 REMARK 465 TYR C 139 REMARK 465 GLU C 140 REMARK 465 TYR C 141 REMARK 465 ILE C 142 REMARK 465 LYS C 143 REMARK 465 ASP C 144 REMARK 465 ALA C 145 REMARK 465 CYS C 146 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 ARG D 117 REMARK 465 SER D 118 REMARK 465 ASP D 119 REMARK 465 THR D 120 REMARK 465 ARG D 121 REMARK 465 ILE D 122 REMARK 465 SER D 123 REMARK 465 ARG D 124 REMARK 465 ASP D 125 REMARK 465 THR D 126 REMARK 465 GLU D 127 REMARK 465 LYS D 128 REMARK 465 LEU D 129 REMARK 465 LYS D 130 REMARK 465 ILE D 131 REMARK 465 ALA D 132 REMARK 465 LEU D 133 REMARK 465 ALA D 134 REMARK 465 LYS D 135 REMARK 465 GLY D 136 REMARK 465 ILE D 137 REMARK 465 ASP D 138 REMARK 465 TYR D 139 REMARK 465 GLU D 140 REMARK 465 TYR D 141 REMARK 465 ILE D 142 REMARK 465 LYS D 143 REMARK 465 ASP D 144 REMARK 465 ALA D 145 REMARK 465 CYS D 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 2 CD OE1 OE2 REMARK 470 LYS A 5 CD CE NZ REMARK 470 LYS A 8 NZ REMARK 470 LYS A 33 CD CE NZ REMARK 470 ARG A 34 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 38 ND2 REMARK 470 LYS A 45 CB CG CD CE REMARK 470 ASP A 46 CB CG OD1 OD2 REMARK 470 GLN A 48 CB CG CD OE1 NE2 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 ASP A 56 CB CG OD1 OD2 REMARK 470 ASN A 57 CB CG OD1 ND2 REMARK 470 LYS A 59 CD CE NZ REMARK 470 ASP A 74 CG OD1 OD2 REMARK 470 THR A 78 CG2 REMARK 470 GLU A 85 OE1 OE2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 LYS A 108 CE NZ REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 LYS A 113 CE NZ REMARK 470 ARG A 115 CD NE CZ NH1 NH2 REMARK 470 ARG A 117 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 LYS B 33 CD CE NZ REMARK 470 LYS B 45 CB CG CD CE NZ REMARK 470 ASP B 46 CG OD1 OD2 REMARK 470 GLN B 48 CG CD OE1 NE2 REMARK 470 GLU B 54 OE2 REMARK 470 ASP B 56 CB CG OD1 OD2 REMARK 470 ASN B 57 CG OD1 ND2 REMARK 470 THR B 69 CG2 REMARK 470 ASP B 74 CG OD1 OD2 REMARK 470 GLU B 85 OE2 REMARK 470 LYS B 102 CE NZ REMARK 470 LYS B 108 CE NZ REMARK 470 LYS B 112 CD CE NZ REMARK 470 LYS B 113 CD CE NZ REMARK 470 ARG B 115 CD NE CZ NH1 NH2 REMARK 470 LYS C 5 CG CD CE NZ REMARK 470 ARG C 34 NE CZ NH1 NH2 REMARK 470 LYS C 45 CG CD CE NZ REMARK 470 ASP C 56 OD1 REMARK 470 THR C 67 OG1 CG2 REMARK 470 ILE C 71 CD1 REMARK 470 ASP C 74 CG OD1 OD2 REMARK 470 GLU C 95 CG CD OE1 REMARK 470 LYS C 102 CG CD CE NZ REMARK 470 LYS C 108 CE NZ REMARK 470 LYS C 112 CG CD CE NZ REMARK 470 LYS C 113 CE NZ REMARK 470 LYS D 5 CG CD CE NZ REMARK 470 LYS D 33 CD CE NZ REMARK 470 ARG D 34 CB CG CD NE CZ NH1 NH2 REMARK 470 ILE D 40 CD1 REMARK 470 ASP D 44 OD2 REMARK 470 LYS D 45 CB CG CD CE NZ REMARK 470 ASP D 46 CB CG OD1 OD2 REMARK 470 GLN D 48 CD OE1 NE2 REMARK 470 ASP D 56 CB CG OD1 OD2 REMARK 470 ASN D 57 CB CG OD1 ND2 REMARK 470 LYS D 59 NZ REMARK 470 ASP D 74 CB CG OD1 OD2 REMARK 470 GLU D 75 CB CG CD OE1 OE2 REMARK 470 GLU D 95 CG CD OE1 OE2 REMARK 470 ASP D 96 CG OD1 OD2 REMARK 470 LYS D 102 CD CE NZ REMARK 470 LYS D 108 CG CD CE NZ REMARK 470 LYS D 112 CB CG CD CE NZ REMARK 470 LYS D 113 CE NZ REMARK 470 ARG D 115 CD NE CZ NH1 NH2 REMARK 470 ASN D 116 C O CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 13 -86.85 -109.06 REMARK 500 ASN A 38 -179.49 -175.49 REMARK 500 TYR A 55 -163.97 -114.56 REMARK 500 ASN A 57 24.78 -140.58 REMARK 500 THR B 13 -87.92 -107.86 REMARK 500 ASN B 38 -177.35 -176.35 REMARK 500 TYR B 55 -163.01 -113.05 REMARK 500 ASP B 96 87.65 -150.77 REMARK 500 MET C 3 166.72 175.74 REMARK 500 THR C 13 -84.99 -110.12 REMARK 500 ASN C 38 -178.64 -174.55 REMARK 500 TYR C 55 -162.55 -113.02 REMARK 500 TYR C 58 137.07 -177.05 REMARK 500 ASP C 96 86.60 -151.62 REMARK 500 THR D 13 -85.57 -108.35 REMARK 500 LYS D 33 40.44 39.95 REMARK 500 TYR D 55 -164.16 -114.10 REMARK 500 ASP D 96 77.23 -158.41 REMARK 500 LYS D 112 -70.43 -52.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4W5X RELATED DB: PDB REMARK 900 RELATED ID: 4W60 RELATED DB: PDB DBREF 4W60 A 1 146 UNP P08586 H7_VACCW 1 146 DBREF 4W60 B 1 146 UNP P08586 H7_VACCW 1 146 DBREF 4W60 C 1 146 UNP P08586 H7_VACCW 1 146 DBREF 4W60 D 1 146 UNP P08586 H7_VACCW 1 146 SEQADV 4W60 HIS A 0 UNP P08586 EXPRESSION TAG SEQADV 4W60 SER A 89 UNP P08586 CYS 89 ENGINEERED MUTATION SEQADV 4W60 HIS B 0 UNP P08586 EXPRESSION TAG SEQADV 4W60 SER B 89 UNP P08586 CYS 89 ENGINEERED MUTATION SEQADV 4W60 HIS C 0 UNP P08586 EXPRESSION TAG SEQADV 4W60 SER C 89 UNP P08586 CYS 89 ENGINEERED MUTATION SEQADV 4W60 HIS D 0 UNP P08586 EXPRESSION TAG SEQADV 4W60 SER D 89 UNP P08586 CYS 89 ENGINEERED MUTATION SEQRES 1 A 147 HIS MET GLU MET ASP LYS ARG MET LYS SER LEU ALA MET SEQRES 2 A 147 THR ALA PHE PHE GLY GLU LEU SER THR LEU ASP ILE MET SEQRES 3 A 147 ALA LEU ILE MET SER ILE PHE LYS ARG HIS PRO ASN ASN SEQRES 4 A 147 THR ILE PHE SER VAL ASP LYS ASP GLY GLN PHE MET ILE SEQRES 5 A 147 ASP PHE GLU TYR ASP ASN TYR LYS ALA SER GLN TYR LEU SEQRES 6 A 147 ASP LEU THR LEU THR PRO ILE SER GLY ASP GLU CYS LYS SEQRES 7 A 147 THR HIS ALA SER SER ILE ALA GLU GLN LEU ALA SER VAL SEQRES 8 A 147 ASP ILE ILE LYS GLU ASP ILE SER GLU TYR ILE LYS THR SEQRES 9 A 147 THR PRO ARG LEU LYS ARG PHE ILE LYS LYS TYR ARG ASN SEQRES 10 A 147 ARG SER ASP THR ARG ILE SER ARG ASP THR GLU LYS LEU SEQRES 11 A 147 LYS ILE ALA LEU ALA LYS GLY ILE ASP TYR GLU TYR ILE SEQRES 12 A 147 LYS ASP ALA CYS SEQRES 1 B 147 HIS MET GLU MET ASP LYS ARG MET LYS SER LEU ALA MET SEQRES 2 B 147 THR ALA PHE PHE GLY GLU LEU SER THR LEU ASP ILE MET SEQRES 3 B 147 ALA LEU ILE MET SER ILE PHE LYS ARG HIS PRO ASN ASN SEQRES 4 B 147 THR ILE PHE SER VAL ASP LYS ASP GLY GLN PHE MET ILE SEQRES 5 B 147 ASP PHE GLU TYR ASP ASN TYR LYS ALA SER GLN TYR LEU SEQRES 6 B 147 ASP LEU THR LEU THR PRO ILE SER GLY ASP GLU CYS LYS SEQRES 7 B 147 THR HIS ALA SER SER ILE ALA GLU GLN LEU ALA SER VAL SEQRES 8 B 147 ASP ILE ILE LYS GLU ASP ILE SER GLU TYR ILE LYS THR SEQRES 9 B 147 THR PRO ARG LEU LYS ARG PHE ILE LYS LYS TYR ARG ASN SEQRES 10 B 147 ARG SER ASP THR ARG ILE SER ARG ASP THR GLU LYS LEU SEQRES 11 B 147 LYS ILE ALA LEU ALA LYS GLY ILE ASP TYR GLU TYR ILE SEQRES 12 B 147 LYS ASP ALA CYS SEQRES 1 C 147 HIS MET GLU MET ASP LYS ARG MET LYS SER LEU ALA MET SEQRES 2 C 147 THR ALA PHE PHE GLY GLU LEU SER THR LEU ASP ILE MET SEQRES 3 C 147 ALA LEU ILE MET SER ILE PHE LYS ARG HIS PRO ASN ASN SEQRES 4 C 147 THR ILE PHE SER VAL ASP LYS ASP GLY GLN PHE MET ILE SEQRES 5 C 147 ASP PHE GLU TYR ASP ASN TYR LYS ALA SER GLN TYR LEU SEQRES 6 C 147 ASP LEU THR LEU THR PRO ILE SER GLY ASP GLU CYS LYS SEQRES 7 C 147 THR HIS ALA SER SER ILE ALA GLU GLN LEU ALA SER VAL SEQRES 8 C 147 ASP ILE ILE LYS GLU ASP ILE SER GLU TYR ILE LYS THR SEQRES 9 C 147 THR PRO ARG LEU LYS ARG PHE ILE LYS LYS TYR ARG ASN SEQRES 10 C 147 ARG SER ASP THR ARG ILE SER ARG ASP THR GLU LYS LEU SEQRES 11 C 147 LYS ILE ALA LEU ALA LYS GLY ILE ASP TYR GLU TYR ILE SEQRES 12 C 147 LYS ASP ALA CYS SEQRES 1 D 147 HIS MET GLU MET ASP LYS ARG MET LYS SER LEU ALA MET SEQRES 2 D 147 THR ALA PHE PHE GLY GLU LEU SER THR LEU ASP ILE MET SEQRES 3 D 147 ALA LEU ILE MET SER ILE PHE LYS ARG HIS PRO ASN ASN SEQRES 4 D 147 THR ILE PHE SER VAL ASP LYS ASP GLY GLN PHE MET ILE SEQRES 5 D 147 ASP PHE GLU TYR ASP ASN TYR LYS ALA SER GLN TYR LEU SEQRES 6 D 147 ASP LEU THR LEU THR PRO ILE SER GLY ASP GLU CYS LYS SEQRES 7 D 147 THR HIS ALA SER SER ILE ALA GLU GLN LEU ALA SER VAL SEQRES 8 D 147 ASP ILE ILE LYS GLU ASP ILE SER GLU TYR ILE LYS THR SEQRES 9 D 147 THR PRO ARG LEU LYS ARG PHE ILE LYS LYS TYR ARG ASN SEQRES 10 D 147 ARG SER ASP THR ARG ILE SER ARG ASP THR GLU LYS LEU SEQRES 11 D 147 LYS ILE ALA LEU ALA LYS GLY ILE ASP TYR GLU TYR ILE SEQRES 12 D 147 LYS ASP ALA CYS FORMUL 5 HOH *19(H2 O) HELIX 1 AA1 ASP A 4 THR A 13 1 10 HELIX 2 AA2 SER A 20 LYS A 33 1 14 HELIX 3 AA3 LYS A 59 ASP A 65 5 7 HELIX 4 AA4 SER A 72 HIS A 79 1 8 HELIX 5 AA5 HIS A 79 ASP A 96 1 18 HELIX 6 AA6 ASP A 96 THR A 104 1 9 HELIX 7 AA7 THR A 104 ARG A 115 1 12 HELIX 8 AA8 ASP B 4 THR B 13 1 10 HELIX 9 AA9 SER B 20 LYS B 33 1 14 HELIX 10 AB1 LYS B 59 ASP B 65 5 7 HELIX 11 AB2 SER B 72 HIS B 79 1 8 HELIX 12 AB3 HIS B 79 ASP B 96 1 18 HELIX 13 AB4 ASP B 96 THR B 104 1 9 HELIX 14 AB5 THR B 104 ARG B 115 1 12 HELIX 15 AB6 ASP C 4 THR C 13 1 10 HELIX 16 AB7 SER C 20 LYS C 33 1 14 HELIX 17 AB8 LYS C 59 TYR C 63 5 5 HELIX 18 AB9 SER C 72 HIS C 79 1 8 HELIX 19 AC1 HIS C 79 ASP C 96 1 18 HELIX 20 AC2 ASP C 96 THR C 104 1 9 HELIX 21 AC3 THR C 104 ARG C 115 1 12 HELIX 22 AC4 ASP D 4 THR D 13 1 10 HELIX 23 AC5 SER D 20 LYS D 33 1 14 HELIX 24 AC6 LYS D 59 ASP D 65 5 7 HELIX 25 AC7 SER D 72 HIS D 79 1 8 HELIX 26 AC8 HIS D 79 ASP D 96 1 18 HELIX 27 AC9 ASP D 96 THR D 104 1 9 HELIX 28 AD1 THR D 104 ARG D 115 1 12 SHEET 1 AA1 3 PHE A 49 GLU A 54 0 SHEET 2 AA1 3 ASN A 38 VAL A 43 -1 N ILE A 40 O ASP A 52 SHEET 3 AA1 3 THR A 69 PRO A 70 -1 O THR A 69 N VAL A 43 SHEET 1 AA2 3 PHE B 49 GLU B 54 0 SHEET 2 AA2 3 ASN B 38 VAL B 43 -1 N ILE B 40 O ASP B 52 SHEET 3 AA2 3 THR B 69 PRO B 70 -1 O THR B 69 N VAL B 43 SHEET 1 AA3 3 PHE C 49 GLU C 54 0 SHEET 2 AA3 3 ASN C 38 VAL C 43 -1 N ILE C 40 O ASP C 52 SHEET 3 AA3 3 THR C 69 PRO C 70 -1 O THR C 69 N VAL C 43 SHEET 1 AA4 3 PHE D 49 GLU D 54 0 SHEET 2 AA4 3 ASN D 38 VAL D 43 -1 N ASN D 38 O GLU D 54 SHEET 3 AA4 3 THR D 69 PRO D 70 -1 O THR D 69 N VAL D 43 SSBOND 1 CYS A 76 CYS C 76 1555 1545 2.04 SSBOND 2 CYS B 76 CYS D 76 1555 3544 2.02 CRYST1 118.714 68.048 81.811 90.00 90.00 90.00 P 21 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008424 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012223 0.00000