HEADER HYDROLASE 22-AUG-14 4W87 TITLE CRYSTAL STRUCTURE OF XEG5A, A GH5 XYLOGLUCAN-SPECIFIC ENDO-BETA-1,4- TITLE 2 GLUCANASE FROM METAGENOMIC LIBRARY, IN COMPLEX WITH A XYLOGLUCAN TITLE 3 OLIGOSACCHARIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOGLUCAN-SPECIFIC ENDO-BETA-1,4-GLUCANASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 92-430; COMPND 5 EC: 3.2.1.151; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE, CELL WALL DEGRADING ENZYME, GH5, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.SANTOS,R.L.CORDEIRO,D.W.S.WONG,M.T.MURAKAMI REVDAT 7 27-DEC-23 4W87 1 HETSYN LINK REVDAT 6 29-JUL-20 4W87 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 01-JAN-20 4W87 1 REMARK REVDAT 4 17-APR-19 4W87 1 REMARK REVDAT 3 22-NOV-17 4W87 1 SOURCE JRNL REMARK REVDAT 2 25-MAR-15 4W87 1 JRNL REVDAT 1 11-MAR-15 4W87 0 JRNL AUTH C.R.DOS SANTOS,R.L.CORDEIRO,D.W.WONG,M.T.MURAKAMI JRNL TITL STRUCTURAL BASIS FOR XYLOGLUCAN SPECIFICITY AND JRNL TITL 2 ALPHA-D-XYLP(1 6)-D-GLCP RECOGNITION AT THE -1 SUBSITE JRNL TITL 3 WITHIN THE GH5 FAMILY. JRNL REF BIOCHEMISTRY V. 54 1930 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25714929 JRNL DOI 10.1021/ACS.BIOCHEM.5B00011 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 50382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2696 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.21 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3617 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 189 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5374 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 285 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20000 REMARK 3 B22 (A**2) : 0.20000 REMARK 3 B33 (A**2) : -0.63000 REMARK 3 B12 (A**2) : 0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.190 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.174 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.130 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.202 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5600 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 5104 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7644 ; 1.776 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11726 ; 0.858 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 676 ; 6.268 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 280 ;36.130 ;25.214 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 868 ;14.127 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.712 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 848 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6400 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1314 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2710 ; 2.271 ; 2.921 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2709 ; 2.267 ; 2.920 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3384 ; 3.072 ; 4.374 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4W87 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53072 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.20000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.89100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NATIVE STRUCTURE OF XEG5A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, PEG400, MAGNESIUM CHLORIDE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.95233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.90467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 326 CG OD1 OD2 REMARK 470 ASP B 326 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 BGC C 2 O5 BGC C 3 2.15 REMARK 500 OE1 GLN B 366 O HOH B 674 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 170 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 230 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP B 230 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP B 230 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG B 258 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 258 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 112 -99.04 -135.48 REMARK 500 HIS A 194 -99.71 -126.85 REMARK 500 HIS A 195 37.87 -80.48 REMARK 500 TYR A 199 -99.88 -124.10 REMARK 500 ASN A 308 49.01 -105.27 REMARK 500 TYR A 316 65.86 -110.01 REMARK 500 LEU A 351 -65.14 -125.65 REMARK 500 ASN A 370 44.27 -148.93 REMARK 500 TYR A 400 -51.66 -142.16 REMARK 500 LYS A 406 58.84 -91.95 REMARK 500 LEU A 409 -51.36 -131.33 REMARK 500 THR B 112 -93.06 -133.11 REMARK 500 ALA B 156 -64.69 -28.33 REMARK 500 HIS B 194 -97.67 -123.85 REMARK 500 HIS B 195 41.18 -82.48 REMARK 500 TYR B 199 -93.54 -121.49 REMARK 500 ARG B 242 -178.82 -170.11 REMARK 500 ASN B 308 47.63 -107.10 REMARK 500 TYR B 316 63.82 -101.51 REMARK 500 LEU B 351 -66.72 -127.89 REMARK 500 ASN B 370 44.38 -141.37 REMARK 500 HIS B 401 -70.67 63.01 REMARK 500 LEU B 409 -47.03 -131.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 662 O REMARK 620 2 HOH A 663 O 68.1 REMARK 620 3 HOH A 664 O 81.0 135.2 REMARK 620 4 HOH A 665 O 80.0 72.7 70.5 REMARK 620 5 HOH B 652 O 150.7 98.9 92.4 70.9 REMARK 620 6 HOH B 653 O 95.5 116.3 97.8 167.9 113.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 672 O REMARK 620 2 HOH A 673 O 107.1 REMARK 620 3 HOH B 654 O 102.9 113.0 REMARK 620 4 HOH B 655 O 78.2 106.8 137.6 REMARK 620 5 HOH B 656 O 156.8 89.2 85.0 81.3 REMARK 620 6 HOH B 657 O 80.0 167.2 74.7 63.6 81.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4W84 RELATED DB: PDB REMARK 900 RELATED ID: 4W85 RELATED DB: PDB REMARK 900 RELATED ID: 4W86 RELATED DB: PDB REMARK 900 RELATED ID: 4W88 RELATED DB: PDB REMARK 900 RELATED ID: 4W89 RELATED DB: PDB REMARK 900 RELATED ID: 4W8A RELATED DB: PDB REMARK 900 RELATED ID: 4W8B RELATED DB: PDB DBREF 4W87 A 92 430 UNP D2K7Z0 D2K7Z0_9BACT 92 430 DBREF 4W87 B 92 430 UNP D2K7Z0 D2K7Z0_9BACT 92 430 SEQADV 4W87 THR A 166 UNP D2K7Z0 PRO 166 ENGINEERED MUTATION SEQADV 4W87 THR B 166 UNP D2K7Z0 PRO 166 ENGINEERED MUTATION SEQRES 1 A 339 ASP ARG SER ARG VAL PHE ASP ILE LEU SER ASN ILE ASN SEQRES 2 A 339 ILE GLY TRP ASN LEU GLY ASN THR LEU ASP ALA THR GLY SEQRES 3 A 339 GLY GLY ASN SER VAL ASN ALA GLU THR SER TRP GLY ASN SEQRES 4 A 339 PRO LYS THR THR GLN GLU ILE VAL ASP THR VAL ASN ASP SEQRES 5 A 339 ARG GLY PHE ASN ALA ILE ARG ILE PRO VAL THR PHE ALA SEQRES 6 A 339 ASN HIS LEU GLY PRO ALA PRO GLU TYR THR ILE SER ALA SEQRES 7 A 339 ASP TRP LEU ALA ARG VAL LYS GLU VAL VAL ASP TYR ALA SEQRES 8 A 339 VAL ASN ASP GLY MET TYR ILE ILE LEU ASP THR HIS HIS SEQRES 9 A 339 GLU THR ASN TYR TRP LEU LYS THR ASP PRO ASN ASN GLU SEQRES 10 A 339 ALA ALA LEU CYS GLU GLU LEU ALA ALA ILE TRP LYS GLN SEQRES 11 A 339 LEU ALA GLU ALA PHE LYS ASP TYR ASP GLU LYS LEU MET SEQRES 12 A 339 PHE GLU GLY MET ASN GLU PRO ARG MET ALA GLY SER ALA SEQRES 13 A 339 LYS GLU TRP SER GLY GLY THR PRO ALA GLU ARG LYS LEU SEQRES 14 A 339 ILE ASN ALA MET ASN LYS ALA PHE ILE ASP ALA VAL ARG SEQRES 15 A 339 ALA THR GLY GLY ASN ASN ALA ASP ARG VAL LEU ILE ILE SEQRES 16 A 339 CYS THR TYR GLY HIS ASN SER ASP GLU PRO THR LEU LYS SEQRES 17 A 339 ASP LEU GLU ILE PRO SER ASP PRO ASN ILE ALA VAL ALA SEQRES 18 A 339 LEU HIS THR TYR THR PRO TYR PHE PHE THR TYR VAL ALA SEQRES 19 A 339 ASP GLY SER TYR SER VAL TRP ASN GLY SER LYS LYS ASN SEQRES 20 A 339 ASP ILE THR TRP GLN TYR ASN ASN ILE LYS LYS TYR LEU SEQRES 21 A 339 ILE ASP LYS GLY ILE PRO VAL VAL ILE THR GLU THR GLY SEQRES 22 A 339 ALA GLN PHE LYS GLU ASN THR GLU ASP ILE VAL ARG TRP SEQRES 23 A 339 ILE GLY ASP TYR VAL GLY THR LEU ASP GLN ASP GLY VAL SEQRES 24 A 339 LYS CYS PHE ILE TRP ASP ASN ASN ILE TYR HIS GLY ASN SEQRES 25 A 339 GLY GLU LYS PHE GLY LEU LEU ASN ARG SER LEU LEU LYS SEQRES 26 A 339 TRP TYR ASN ASP ASP ILE VAL ASP ALA TYR VAL ASN HIS SEQRES 27 A 339 ALA SEQRES 1 B 339 ASP ARG SER ARG VAL PHE ASP ILE LEU SER ASN ILE ASN SEQRES 2 B 339 ILE GLY TRP ASN LEU GLY ASN THR LEU ASP ALA THR GLY SEQRES 3 B 339 GLY GLY ASN SER VAL ASN ALA GLU THR SER TRP GLY ASN SEQRES 4 B 339 PRO LYS THR THR GLN GLU ILE VAL ASP THR VAL ASN ASP SEQRES 5 B 339 ARG GLY PHE ASN ALA ILE ARG ILE PRO VAL THR PHE ALA SEQRES 6 B 339 ASN HIS LEU GLY PRO ALA PRO GLU TYR THR ILE SER ALA SEQRES 7 B 339 ASP TRP LEU ALA ARG VAL LYS GLU VAL VAL ASP TYR ALA SEQRES 8 B 339 VAL ASN ASP GLY MET TYR ILE ILE LEU ASP THR HIS HIS SEQRES 9 B 339 GLU THR ASN TYR TRP LEU LYS THR ASP PRO ASN ASN GLU SEQRES 10 B 339 ALA ALA LEU CYS GLU GLU LEU ALA ALA ILE TRP LYS GLN SEQRES 11 B 339 LEU ALA GLU ALA PHE LYS ASP TYR ASP GLU LYS LEU MET SEQRES 12 B 339 PHE GLU GLY MET ASN GLU PRO ARG MET ALA GLY SER ALA SEQRES 13 B 339 LYS GLU TRP SER GLY GLY THR PRO ALA GLU ARG LYS LEU SEQRES 14 B 339 ILE ASN ALA MET ASN LYS ALA PHE ILE ASP ALA VAL ARG SEQRES 15 B 339 ALA THR GLY GLY ASN ASN ALA ASP ARG VAL LEU ILE ILE SEQRES 16 B 339 CYS THR TYR GLY HIS ASN SER ASP GLU PRO THR LEU LYS SEQRES 17 B 339 ASP LEU GLU ILE PRO SER ASP PRO ASN ILE ALA VAL ALA SEQRES 18 B 339 LEU HIS THR TYR THR PRO TYR PHE PHE THR TYR VAL ALA SEQRES 19 B 339 ASP GLY SER TYR SER VAL TRP ASN GLY SER LYS LYS ASN SEQRES 20 B 339 ASP ILE THR TRP GLN TYR ASN ASN ILE LYS LYS TYR LEU SEQRES 21 B 339 ILE ASP LYS GLY ILE PRO VAL VAL ILE THR GLU THR GLY SEQRES 22 B 339 ALA GLN PHE LYS GLU ASN THR GLU ASP ILE VAL ARG TRP SEQRES 23 B 339 ILE GLY ASP TYR VAL GLY THR LEU ASP GLN ASP GLY VAL SEQRES 24 B 339 LYS CYS PHE ILE TRP ASP ASN ASN ILE TYR HIS GLY ASN SEQRES 25 B 339 GLY GLU LYS PHE GLY LEU LEU ASN ARG SER LEU LEU LYS SEQRES 26 B 339 TRP TYR ASN ASP ASP ILE VAL ASP ALA TYR VAL ASN HIS SEQRES 27 B 339 ALA HET BGC C 1 12 HET BGC C 2 11 HET BGC C 3 11 HET XYS C 4 9 HET BGC D 1 12 HET BGC D 2 11 HET BGC D 3 11 HET XYS D 4 9 HET MG A 501 1 HET MG B 501 1 HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM XYS ALPHA-D-XYLOPYRANOSE HETNAM MG MAGNESIUM ION HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN XYS ALPHA-D-XYLOSE; D-XYLOSE; XYLOSE; XYLOPYRANOSE FORMUL 3 BGC 6(C6 H12 O6) FORMUL 3 XYS 2(C5 H10 O5) FORMUL 5 MG 2(MG 2+) FORMUL 7 HOH *285(H2 O) HELIX 1 AA1 ARG A 93 ASN A 102 1 10 HELIX 2 AA2 SER A 121 SER A 127 5 7 HELIX 3 AA3 THR A 134 GLY A 145 1 12 HELIX 4 AA4 PHE A 155 LEU A 159 5 5 HELIX 5 AA5 SER A 168 ASP A 185 1 18 HELIX 6 AA6 HIS A 194 TYR A 199 5 6 HELIX 7 AA7 ASP A 204 ASN A 206 5 3 HELIX 8 AA8 ASN A 207 LYS A 227 1 21 HELIX 9 AA9 THR A 254 ALA A 274 1 21 HELIX 10 AB1 THR A 275 ASP A 281 5 7 HELIX 11 AB2 TYR A 289 ASN A 292 5 4 HELIX 12 AB3 ASP A 294 ASP A 300 1 7 HELIX 13 AB4 PRO A 318 TYR A 323 1 6 HELIX 14 AB5 LYS A 336 LEU A 351 1 16 HELIX 15 AB6 ILE A 352 GLY A 355 5 4 HELIX 16 AB7 ASN A 370 GLN A 387 1 18 HELIX 17 AB8 ASN A 419 ASN A 428 1 10 HELIX 18 AB9 ARG B 93 ASN B 102 1 10 HELIX 19 AC1 SER B 121 SER B 127 5 7 HELIX 20 AC2 THR B 134 GLY B 145 1 12 HELIX 21 AC3 PHE B 155 LEU B 159 5 5 HELIX 22 AC4 SER B 168 ASP B 185 1 18 HELIX 23 AC5 HIS B 194 TYR B 199 5 6 HELIX 24 AC6 ASP B 204 ASN B 206 5 3 HELIX 25 AC7 ASN B 207 PHE B 226 1 20 HELIX 26 AC8 THR B 254 ALA B 274 1 21 HELIX 27 AC9 THR B 275 ASP B 281 5 7 HELIX 28 AD1 TYR B 289 ASN B 292 5 4 HELIX 29 AD2 ASP B 294 ASP B 300 1 7 HELIX 30 AD3 PRO B 318 TYR B 323 1 6 HELIX 31 AD4 LYS B 336 LEU B 351 1 16 HELIX 32 AD5 ILE B 352 GLY B 355 5 4 HELIX 33 AD6 ASN B 370 GLN B 387 1 18 HELIX 34 AD7 ASN B 419 ASN B 428 1 10 SHEET 1 AA1 9 GLY A 106 LEU A 109 0 SHEET 2 AA1 9 ALA A 148 ILE A 151 1 O ARG A 150 N LEU A 109 SHEET 3 AA1 9 TYR A 188 ASP A 192 1 O ILE A 190 N ILE A 151 SHEET 4 AA1 9 LEU A 233 GLU A 236 1 O MET A 234 N ILE A 189 SHEET 5 AA1 9 LEU A 284 CYS A 287 1 O ILE A 285 N PHE A 235 SHEET 6 AA1 9 ILE A 309 HIS A 314 1 O ALA A 312 N ILE A 286 SHEET 7 AA1 9 VAL A 358 THR A 363 1 O VAL A 359 N VAL A 311 SHEET 8 AA1 9 LYS A 391 ASP A 396 1 O TRP A 395 N THR A 363 SHEET 9 AA1 9 GLY A 106 LEU A 109 1 N GLY A 106 O CYS A 392 SHEET 1 AA2 2 LEU A 410 ASN A 411 0 SHEET 2 AA2 2 LYS A 416 TRP A 417 -1 O LYS A 416 N ASN A 411 SHEET 1 AA3 9 GLY B 106 LEU B 109 0 SHEET 2 AA3 9 ALA B 148 ILE B 151 1 O ARG B 150 N LEU B 109 SHEET 3 AA3 9 TYR B 188 ASP B 192 1 O ILE B 190 N ILE B 151 SHEET 4 AA3 9 LEU B 233 GLU B 236 1 O MET B 234 N ILE B 189 SHEET 5 AA3 9 LEU B 284 CYS B 287 1 O ILE B 285 N PHE B 235 SHEET 6 AA3 9 ILE B 309 HIS B 314 1 O ALA B 312 N ILE B 286 SHEET 7 AA3 9 VAL B 358 THR B 363 1 O VAL B 359 N VAL B 311 SHEET 8 AA3 9 CYS B 392 ASP B 396 1 O TRP B 395 N THR B 363 SHEET 9 AA3 9 GLY B 106 LEU B 109 1 N GLY B 106 O CYS B 392 SHEET 1 AA4 2 LEU B 410 ASN B 411 0 SHEET 2 AA4 2 LYS B 416 TRP B 417 -1 O LYS B 416 N ASN B 411 LINK O4 BGC C 1 C1 BGC C 2 1555 1555 1.44 LINK O4 BGC C 2 C1 BGC C 3 1555 1555 1.43 LINK O6 BGC C 3 C1 XYS C 4 1555 1555 1.46 LINK O4 BGC D 1 C1 BGC D 2 1555 1555 1.44 LINK O4 BGC D 2 C1 BGC D 3 1555 1555 1.44 LINK O6 BGC D 3 C1 XYS D 4 1555 1555 1.45 LINK MG MG A 501 O HOH A 662 1555 1555 2.25 LINK MG MG A 501 O HOH A 663 1555 1555 1.78 LINK MG MG A 501 O HOH A 664 1555 1555 2.24 LINK MG MG A 501 O HOH A 665 1555 1555 2.25 LINK MG MG A 501 O HOH B 652 1555 1555 1.88 LINK MG MG A 501 O HOH B 653 1555 1555 2.04 LINK O HOH A 672 MG MG B 501 1555 1555 1.93 LINK O HOH A 673 MG MG B 501 1555 1555 1.88 LINK MG MG B 501 O HOH B 654 1555 1555 2.11 LINK MG MG B 501 O HOH B 655 1555 1555 1.81 LINK MG MG B 501 O HOH B 656 1555 1555 2.06 LINK MG MG B 501 O HOH B 657 1555 1555 2.34 CISPEP 1 ALA A 162 PRO A 163 0 -4.09 CISPEP 2 THR A 317 PRO A 318 0 0.07 CISPEP 3 ALA B 162 PRO B 163 0 -0.19 CISPEP 4 THR B 317 PRO B 318 0 -3.28 CRYST1 96.504 96.504 95.857 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010362 0.005983 0.000000 0.00000 SCALE2 0.000000 0.011965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010432 0.00000