HEADER RNA BINDING PROTEIN 03-SEP-14 4WBE TITLE CRYSTAL STRUCTURE OF THE HR-1 DOMAIN OF HUMAN CAPRIN-1 IN THE C121 TITLE 2 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPRIN-1; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 132-251; COMPND 5 SYNONYM: CELL CYCLE-ASSOCIATED PROTEIN 1,CYTOPLASMIC ACTIVATION- AND COMPND 6 PROLIFERATION-ASSOCIATED PROTEIN 1,GPI-ANCHORED MEMBRANE PROTEIN 1, COMPND 7 GPI-ANCHORED PROTEIN P137,P137GPI,MEMBRANE COMPONENT CHROMOSOME 11 COMPND 8 SURFACE MARKER 1,RNA GRANULE PROTEIN 105; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CAPRIN1, GPIAP1, GPIP137, M11S1, RNG105; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS ALL ALPHA HELICAL, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.WU,J.ZHU,X.HUANG,Z.DU REVDAT 2 27-DEC-23 4WBE 1 REMARK REVDAT 1 21-OCT-15 4WBE 0 JRNL AUTH Y.WU,J.ZHU,X.HUANG,Z.DU JRNL TITL CRYSTAL STRUCTURE OF THE HR-1 DOMAIN OF HUMAN CAPRIN-1 IN JRNL TITL 2 THE C121 SPACE GROUP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 27893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3884 - 4.9354 0.96 1956 147 0.1942 0.2154 REMARK 3 2 4.9354 - 3.9195 0.98 1951 144 0.1570 0.2016 REMARK 3 3 3.9195 - 3.4247 0.98 1945 147 0.1706 0.2076 REMARK 3 4 3.4247 - 3.1119 0.97 1938 140 0.1926 0.2417 REMARK 3 5 3.1119 - 2.8890 0.97 1928 143 0.2015 0.2620 REMARK 3 6 2.8890 - 2.7187 0.97 1936 140 0.2160 0.2398 REMARK 3 7 2.7187 - 2.5826 0.96 1886 141 0.1993 0.2283 REMARK 3 8 2.5826 - 2.4703 0.95 1913 131 0.2109 0.2538 REMARK 3 9 2.4703 - 2.3752 0.93 1833 135 0.2140 0.2368 REMARK 3 10 2.3752 - 2.2932 0.91 1798 134 0.2142 0.2567 REMARK 3 11 2.2932 - 2.2216 0.90 1771 135 0.2313 0.2721 REMARK 3 12 2.2216 - 2.1581 0.89 1741 125 0.2435 0.2642 REMARK 3 13 2.1581 - 2.1013 0.87 1740 126 0.2577 0.2467 REMARK 3 14 2.1013 - 2.0500 0.85 1645 124 0.2832 0.3002 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3034 REMARK 3 ANGLE : 0.942 4084 REMARK 3 CHIRALITY : 0.067 452 REMARK 3 PLANARITY : 0.004 532 REMARK 3 DIHEDRAL : 13.832 1191 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5411 17.6509 23.3176 REMARK 3 T TENSOR REMARK 3 T11: 0.0369 T22: 0.0563 REMARK 3 T33: 0.1488 T12: 0.0070 REMARK 3 T13: -0.0336 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 4.2777 L22: 2.7777 REMARK 3 L33: 1.8146 L12: -0.6771 REMARK 3 L13: 0.1919 L23: 0.3841 REMARK 3 S TENSOR REMARK 3 S11: -0.2650 S12: -0.0590 S13: 0.0104 REMARK 3 S21: 0.0525 S22: 0.2618 S23: 0.2069 REMARK 3 S31: -0.0238 S32: 0.0764 S33: 0.0595 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6997 13.1496 19.2073 REMARK 3 T TENSOR REMARK 3 T11: 0.1500 T22: 0.1790 REMARK 3 T33: 0.1248 T12: 0.0119 REMARK 3 T13: 0.0023 T23: -0.0441 REMARK 3 L TENSOR REMARK 3 L11: 2.0518 L22: 1.0047 REMARK 3 L33: 2.4389 L12: -1.0748 REMARK 3 L13: 0.1327 L23: -0.5321 REMARK 3 S TENSOR REMARK 3 S11: 0.1148 S12: 0.4303 S13: -0.2108 REMARK 3 S21: -0.3051 S22: -0.1194 S23: -0.0302 REMARK 3 S31: 0.2009 S32: 0.0275 S33: -0.0213 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8522 16.2160 14.0153 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.2747 REMARK 3 T33: -0.4142 T12: 0.0005 REMARK 3 T13: 0.1096 T23: -0.0649 REMARK 3 L TENSOR REMARK 3 L11: 2.8679 L22: 3.8681 REMARK 3 L33: 2.1867 L12: 0.1893 REMARK 3 L13: -0.1030 L23: -0.2869 REMARK 3 S TENSOR REMARK 3 S11: 0.2771 S12: 0.6353 S13: -0.1244 REMARK 3 S21: -1.2595 S22: -0.0419 S23: 1.6188 REMARK 3 S31: -0.0676 S32: 0.0062 S33: 0.6131 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 132 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6901 5.2192 33.0597 REMARK 3 T TENSOR REMARK 3 T11: 0.1946 T22: 0.1414 REMARK 3 T33: 0.3028 T12: -0.0718 REMARK 3 T13: -0.0050 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.2530 L22: 2.6142 REMARK 3 L33: 1.5788 L12: 1.2035 REMARK 3 L13: -0.4291 L23: -1.1231 REMARK 3 S TENSOR REMARK 3 S11: 0.0798 S12: -0.1367 S13: 0.1810 REMARK 3 S21: -0.0369 S22: -0.1159 S23: -0.0170 REMARK 3 S31: -0.0714 S32: 0.0084 S33: 0.0173 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 171 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.8555 4.1771 20.4839 REMARK 3 T TENSOR REMARK 3 T11: 0.4226 T22: 0.3505 REMARK 3 T33: 0.2820 T12: -0.1326 REMARK 3 T13: -0.1156 T23: 0.1107 REMARK 3 L TENSOR REMARK 3 L11: 1.5571 L22: 1.6018 REMARK 3 L33: 2.3294 L12: -0.3514 REMARK 3 L13: -0.2326 L23: -0.7188 REMARK 3 S TENSOR REMARK 3 S11: -0.3339 S12: 0.6255 S13: 0.1306 REMARK 3 S21: -0.5800 S22: 0.3376 S23: 0.1058 REMARK 3 S31: -0.1088 S32: -0.5594 S33: 0.0477 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 194 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8319 -10.6605 35.8299 REMARK 3 T TENSOR REMARK 3 T11: 0.1764 T22: 0.1398 REMARK 3 T33: 0.2755 T12: -0.0447 REMARK 3 T13: -0.0266 T23: -0.0200 REMARK 3 L TENSOR REMARK 3 L11: 2.8773 L22: 1.5312 REMARK 3 L33: 1.6958 L12: 1.8229 REMARK 3 L13: -1.7851 L23: -0.8799 REMARK 3 S TENSOR REMARK 3 S11: -0.1538 S12: -0.0005 S13: -0.2327 REMARK 3 S21: -0.2068 S22: -0.0714 S23: -0.2258 REMARK 3 S31: 0.2561 S32: 0.0884 S33: 0.1155 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 219 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2720 4.3296 23.4958 REMARK 3 T TENSOR REMARK 3 T11: 0.2660 T22: 0.2194 REMARK 3 T33: 0.2176 T12: -0.0585 REMARK 3 T13: 0.0267 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.0495 L22: 3.7031 REMARK 3 L33: 3.2523 L12: 1.2846 REMARK 3 L13: -0.1279 L23: -0.4705 REMARK 3 S TENSOR REMARK 3 S11: -0.1046 S12: 0.3499 S13: 0.1210 REMARK 3 S21: -0.9974 S22: 0.1956 S23: -0.3522 REMARK 3 S31: 0.1123 S32: 0.1605 S33: 0.0887 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 133 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9213 -7.7134 41.5356 REMARK 3 T TENSOR REMARK 3 T11: 0.2840 T22: 0.1789 REMARK 3 T33: 0.3902 T12: -0.0728 REMARK 3 T13: -0.0613 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 4.3041 L22: 3.9715 REMARK 3 L33: 2.4136 L12: -0.0958 REMARK 3 L13: -0.0046 L23: 0.2713 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: -0.0598 S13: -0.8801 REMARK 3 S21: -0.1759 S22: -0.0738 S23: -0.4761 REMARK 3 S31: 0.1354 S32: 0.4025 S33: -0.0205 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 161 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.7950 -2.9782 54.5933 REMARK 3 T TENSOR REMARK 3 T11: 0.5228 T22: 0.5476 REMARK 3 T33: 0.7233 T12: -0.0669 REMARK 3 T13: 0.3667 T23: -0.1100 REMARK 3 L TENSOR REMARK 3 L11: 3.0303 L22: 1.1154 REMARK 3 L33: 2.1188 L12: 0.5475 REMARK 3 L13: -1.7794 L23: 0.2707 REMARK 3 S TENSOR REMARK 3 S11: -0.5077 S12: -0.2505 S13: 0.1451 REMARK 3 S21: -0.2288 S22: -0.3403 S23: 0.8663 REMARK 3 S31: 0.3591 S32: -0.7265 S33: -0.8881 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 170 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.9997 -9.7604 61.4681 REMARK 3 T TENSOR REMARK 3 T11: 0.6010 T22: 0.6320 REMARK 3 T33: 0.3894 T12: -0.2257 REMARK 3 T13: 0.1757 T23: 0.0327 REMARK 3 L TENSOR REMARK 3 L11: 1.4432 L22: 0.7187 REMARK 3 L33: 1.4798 L12: 0.9812 REMARK 3 L13: -1.3625 L23: -1.0234 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.4015 S13: 0.3278 REMARK 3 S21: 0.1921 S22: 0.0291 S23: 0.3948 REMARK 3 S31: 0.2319 S32: -0.3566 S33: -0.3586 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 180 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2045 4.3112 54.2598 REMARK 3 T TENSOR REMARK 3 T11: 0.5971 T22: 0.3880 REMARK 3 T33: 0.2840 T12: -0.0692 REMARK 3 T13: 0.1917 T23: -0.2854 REMARK 3 L TENSOR REMARK 3 L11: 2.0013 L22: 1.2200 REMARK 3 L33: 3.0547 L12: -0.1490 REMARK 3 L13: 0.5183 L23: -0.2265 REMARK 3 S TENSOR REMARK 3 S11: -0.3901 S12: -0.4945 S13: 0.6986 REMARK 3 S21: 0.9367 S22: -0.3589 S23: 0.6933 REMARK 3 S31: -1.0204 S32: -0.0224 S33: -0.5573 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 194 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5542 9.5490 41.7239 REMARK 3 T TENSOR REMARK 3 T11: 0.4496 T22: 0.2365 REMARK 3 T33: 0.2630 T12: -0.2201 REMARK 3 T13: 0.0110 T23: -0.0974 REMARK 3 L TENSOR REMARK 3 L11: 1.1994 L22: 2.6357 REMARK 3 L33: 2.3669 L12: -0.2962 REMARK 3 L13: -0.3206 L23: -1.3018 REMARK 3 S TENSOR REMARK 3 S11: 0.1935 S12: -0.7522 S13: 0.3470 REMARK 3 S21: 0.4935 S22: -0.1986 S23: -0.0575 REMARK 3 S31: -0.8640 S32: 0.8024 S33: 0.0723 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 220 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7164 -1.9134 55.8953 REMARK 3 T TENSOR REMARK 3 T11: 0.5265 T22: 0.5451 REMARK 3 T33: 0.1402 T12: -0.1869 REMARK 3 T13: -0.0361 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 2.3064 L22: 1.4592 REMARK 3 L33: 0.4961 L12: 0.6313 REMARK 3 L13: 0.3945 L23: 0.7660 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: -1.1809 S13: -0.2158 REMARK 3 S21: 0.4838 S22: -0.0633 S23: -0.0833 REMARK 3 S31: 0.0377 S32: 0.4693 S33: -0.0555 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 243 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.5130 -11.5559 48.2094 REMARK 3 T TENSOR REMARK 3 T11: 0.3735 T22: 0.3823 REMARK 3 T33: 0.2022 T12: -0.1702 REMARK 3 T13: 0.0174 T23: 0.0558 REMARK 3 L TENSOR REMARK 3 L11: 1.2130 L22: 5.7442 REMARK 3 L33: 3.6704 L12: -0.0904 REMARK 3 L13: -1.5109 L23: 2.0242 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: 0.2057 S13: -0.1928 REMARK 3 S21: -0.2295 S22: -0.0196 S23: 0.5950 REMARK 3 S31: -0.1560 S32: -0.6688 S33: -0.2503 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 1770 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 1770 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WBE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203521. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29462 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 32.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG750MME, 0.1 M TRIS, 0.1 M REMARK 280 POTASSIUM FLUORIDE, 10% GLYCEROL, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.47500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.73000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.47500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.73000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -0.30379 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 58.01920 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG C 132 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU C 196 O HOH C 375 1.87 REMARK 500 OE1 GLU A 142 O HOH A 301 1.96 REMARK 500 O HOH C 363 O HOH C 375 1.99 REMARK 500 O HOH C 301 O HOH C 302 2.00 REMARK 500 OE2 GLU B 182 O HOH B 358 2.02 REMARK 500 N ARG A 132 O HOH A 302 2.02 REMARK 500 O HOH A 365 O HOH A 403 2.03 REMARK 500 O HOH B 301 O HOH B 302 2.03 REMARK 500 O GLN A 242 O HOH A 303 2.06 REMARK 500 OG SER B 248 O HOH B 374 2.08 REMARK 500 OE1 GLU C 205 O HOH C 359 2.08 REMARK 500 O HOH A 388 O HOH A 391 2.09 REMARK 500 O HOH B 336 O HOH B 375 2.10 REMARK 500 OE2 GLU B 180 O HOH B 301 2.11 REMARK 500 O HOH A 366 O HOH A 378 2.11 REMARK 500 O HOH A 386 O HOH A 405 2.13 REMARK 500 O HOH C 362 O HOH C 370 2.14 REMARK 500 O HOH B 332 O HOH B 367 2.14 REMARK 500 NH1 ARG A 133 O HOH A 304 2.16 REMARK 500 O HOH A 344 O HOH A 350 2.16 REMARK 500 O HOH A 314 O HOH A 342 2.17 REMARK 500 OE2 GLU A 140 O HOH A 305 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 355 O HOH C 302 4456 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 172 -88.28 -84.96 REMARK 500 ASN A 173 53.26 -90.20 REMARK 500 THR A 228 -147.25 -138.08 REMARK 500 THR B 228 -150.26 -136.89 REMARK 500 THR C 228 -146.36 -138.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 378 DISTANCE = 7.36 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WBP RELATED DB: PDB DBREF 4WBE A 132 251 UNP Q14444 CAPR1_HUMAN 132 251 DBREF 4WBE B 132 251 UNP Q14444 CAPR1_HUMAN 132 251 DBREF 4WBE C 132 251 UNP Q14444 CAPR1_HUMAN 132 251 SEQRES 1 A 120 ARG ARG GLU GLN LEU MET ARG GLU GLU ALA GLU GLN LYS SEQRES 2 A 120 ARG LEU LYS THR VAL LEU GLU LEU GLN TYR VAL LEU ASP SEQRES 3 A 120 LYS LEU GLY ASP ASP GLU VAL ARG THR ASP LEU LYS GLN SEQRES 4 A 120 GLY LEU ASN GLY VAL PRO ILE LEU SER GLU GLU GLU LEU SEQRES 5 A 120 SER LEU LEU ASP GLU PHE TYR LYS LEU VAL ASP PRO GLU SEQRES 6 A 120 ARG ASP MET SER LEU ARG LEU ASN GLU GLN TYR GLU HIS SEQRES 7 A 120 ALA SER ILE HIS LEU TRP ASP LEU LEU GLU GLY LYS GLU SEQRES 8 A 120 LYS PRO VAL CYS GLY THR THR TYR LYS VAL LEU LYS GLU SEQRES 9 A 120 ILE VAL GLU ARG VAL PHE GLN SER ASN TYR PHE ASP SER SEQRES 10 A 120 THR HIS ASN SEQRES 1 B 120 ARG ARG GLU GLN LEU MET ARG GLU GLU ALA GLU GLN LYS SEQRES 2 B 120 ARG LEU LYS THR VAL LEU GLU LEU GLN TYR VAL LEU ASP SEQRES 3 B 120 LYS LEU GLY ASP ASP GLU VAL ARG THR ASP LEU LYS GLN SEQRES 4 B 120 GLY LEU ASN GLY VAL PRO ILE LEU SER GLU GLU GLU LEU SEQRES 5 B 120 SER LEU LEU ASP GLU PHE TYR LYS LEU VAL ASP PRO GLU SEQRES 6 B 120 ARG ASP MET SER LEU ARG LEU ASN GLU GLN TYR GLU HIS SEQRES 7 B 120 ALA SER ILE HIS LEU TRP ASP LEU LEU GLU GLY LYS GLU SEQRES 8 B 120 LYS PRO VAL CYS GLY THR THR TYR LYS VAL LEU LYS GLU SEQRES 9 B 120 ILE VAL GLU ARG VAL PHE GLN SER ASN TYR PHE ASP SER SEQRES 10 B 120 THR HIS ASN SEQRES 1 C 120 ARG ARG GLU GLN LEU MET ARG GLU GLU ALA GLU GLN LYS SEQRES 2 C 120 ARG LEU LYS THR VAL LEU GLU LEU GLN TYR VAL LEU ASP SEQRES 3 C 120 LYS LEU GLY ASP ASP GLU VAL ARG THR ASP LEU LYS GLN SEQRES 4 C 120 GLY LEU ASN GLY VAL PRO ILE LEU SER GLU GLU GLU LEU SEQRES 5 C 120 SER LEU LEU ASP GLU PHE TYR LYS LEU VAL ASP PRO GLU SEQRES 6 C 120 ARG ASP MET SER LEU ARG LEU ASN GLU GLN TYR GLU HIS SEQRES 7 C 120 ALA SER ILE HIS LEU TRP ASP LEU LEU GLU GLY LYS GLU SEQRES 8 C 120 LYS PRO VAL CYS GLY THR THR TYR LYS VAL LEU LYS GLU SEQRES 9 C 120 ILE VAL GLU ARG VAL PHE GLN SER ASN TYR PHE ASP SER SEQRES 10 C 120 THR HIS ASN FORMUL 4 HOH *269(H2 O) HELIX 1 AA1 ARG A 132 LEU A 159 1 28 HELIX 2 AA2 ASP A 161 GLY A 171 1 11 HELIX 3 AA3 SER A 179 ASP A 194 1 16 HELIX 4 AA4 ARG A 202 TYR A 207 1 6 HELIX 5 AA5 TYR A 207 GLY A 220 1 14 HELIX 6 AA6 TYR A 230 SER A 243 1 14 HELIX 7 AA7 ASN A 244 SER A 248 5 5 HELIX 8 AA8 ARG B 133 LEU B 159 1 27 HELIX 9 AA9 ASP B 161 GLY B 171 1 11 HELIX 10 AB1 SER B 179 ASP B 194 1 16 HELIX 11 AB2 ARG B 202 TYR B 207 1 6 HELIX 12 AB3 TYR B 207 GLY B 220 1 14 HELIX 13 AB4 TYR B 230 SER B 243 1 14 HELIX 14 AB5 ASN B 244 SER B 248 5 5 HELIX 15 AB6 GLU C 134 LEU C 159 1 26 HELIX 16 AB7 ASP C 161 GLN C 170 1 10 HELIX 17 AB8 SER C 179 ASP C 194 1 16 HELIX 18 AB9 ARG C 202 TYR C 207 1 6 HELIX 19 AC1 TYR C 207 GLY C 220 1 14 HELIX 20 AC2 TYR C 230 SER C 243 1 14 HELIX 21 AC3 ASN C 244 SER C 248 5 5 SHEET 1 AA1 2 PRO A 224 VAL A 225 0 SHEET 2 AA1 2 THR A 228 THR A 229 -1 O THR A 228 N VAL A 225 SHEET 1 AA2 2 PRO B 224 VAL B 225 0 SHEET 2 AA2 2 THR B 228 THR B 229 -1 O THR B 228 N VAL B 225 SHEET 1 AA3 2 PRO C 224 VAL C 225 0 SHEET 2 AA3 2 THR C 228 THR C 229 -1 O THR C 228 N VAL C 225 CRYST1 106.950 77.460 58.020 90.00 90.30 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009350 0.000000 0.000049 0.00000 SCALE2 0.000000 0.012910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017236 0.00000