HEADER RNA BINDING PROTEIN 03-SEP-14 4WBQ TITLE CRYSTAL STRUCTURE OF THE EXONUCLEASE DOMAIN OF QIP (QDE-2 INTERACTING TITLE 2 PROTEIN) SOLVED BY NATIVE-SAD PHASING. COMPND MOL_ID: 1; COMPND 2 MOLECULE: QDE-2-INTERACTING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 326-565; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEUROSPORA CRASSA; SOURCE 3 ORGANISM_TAXID: 5141; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BOLAND,T.WEINERT,O.WEICHENRIEDER,M.WANG REVDAT 3 11-FEB-15 4WBQ 1 JRNL REVDAT 2 31-DEC-14 4WBQ 1 JRNL REVDAT 1 10-DEC-14 4WBQ 0 JRNL AUTH T.WEINERT,V.OLIERIC,S.WALTERSPERGER,E.PANEPUCCI,L.CHEN, JRNL AUTH 2 H.ZHANG,D.ZHOU,J.ROSE,A.EBIHARA,S.KURAMITSU,D.LI,N.HOWE, JRNL AUTH 3 G.SCHNAPP,A.PAUTSCH,K.BARGSTEN,A.E.PROTA,P.SURANA,J.KOTTUR, JRNL AUTH 4 D.T.NAIR,F.BASILICO,V.CECATIELLO,S.PASQUALATO,A.BOLAND, JRNL AUTH 5 O.WEICHENRIEDER,B.C.WANG,M.O.STEINMETZ,M.CAFFREY,M.WANG JRNL TITL FAST NATIVE-SAD PHASING FOR ROUTINE MACROMOLECULAR STRUCTURE JRNL TITL 2 DETERMINATION. JRNL REF NAT.METHODS V. 12 131 2015 JRNL REFN ESSN 1548-7105 JRNL PMID 25506719 JRNL DOI 10.1038/NMETH.3211 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 20678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1032 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9683 - 5.1494 1.00 2785 155 0.1788 0.2177 REMARK 3 2 5.1494 - 4.0882 1.00 2818 148 0.1456 0.1831 REMARK 3 3 4.0882 - 3.5717 1.00 2789 150 0.1533 0.2331 REMARK 3 4 3.5717 - 3.2453 1.00 2809 150 0.1758 0.2163 REMARK 3 5 3.2453 - 3.0127 1.00 2825 138 0.1912 0.3209 REMARK 3 6 3.0127 - 2.8352 1.00 2765 148 0.2106 0.2384 REMARK 3 7 2.8352 - 2.6932 0.99 2855 143 0.2264 0.3145 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2772 REMARK 3 ANGLE : 0.587 3744 REMARK 3 CHIRALITY : 0.022 432 REMARK 3 PLANARITY : 0.002 471 REMARK 3 DIHEDRAL : 11.036 984 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND RESID ' 519 ' AND NAME ' SD ' AND REMARK 3 ALTLOC ' ' REMARK 3 ORIGIN FOR THE GROUP (A): NULL NULL NULL REMARK 3 T TENSOR REMARK 3 L TENSOR REMARK 3 S TENSOR REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WBQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203549. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.0664 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.693 REMARK 200 RESOLUTION RANGE LOW (A) : 43.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 154.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.13400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 16.94 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CACL2, 0.1M HEPES BUFFER, PH7, REMARK 280 20% PEG6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.87333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.43667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.43667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 74.87333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 326 REMARK 465 ILE A 327 REMARK 465 GLN A 328 REMARK 465 PRO A 329 REMARK 465 GLU A 330 REMARK 465 ASN A 365 REMARK 465 VAL A 366 REMARK 465 ALA A 367 REMARK 465 PRO A 368 REMARK 465 GLY A 369 REMARK 465 GLU A 370 REMARK 465 GLY A 371 REMARK 465 SER A 372 REMARK 465 ASN A 394 REMARK 465 SER A 395 REMARK 465 ARG A 396 REMARK 465 HIS A 397 REMARK 465 VAL A 398 REMARK 465 GLN A 399 REMARK 465 GLY A 400 REMARK 465 ARG A 401 REMARK 465 ALA A 402 REMARK 465 GLU A 429 REMARK 465 SER A 430 REMARK 465 SER A 431 REMARK 465 ILE A 432 REMARK 465 GLY A 433 REMARK 465 GLY A 434 REMARK 465 GLU A 435 REMARK 465 GLY A 436 REMARK 465 ALA A 437 REMARK 465 LYS A 502 REMARK 465 ARG A 532 REMARK 465 ALA A 533 REMARK 465 ALA A 534 REMARK 465 ALA A 535 REMARK 465 LYS A 536 REMARK 465 ALA A 537 REMARK 465 SER A 538 REMARK 465 LYS A 539 REMARK 465 ALA A 540 REMARK 465 ASN A 541 REMARK 465 THR A 542 REMARK 465 SER A 543 REMARK 465 ASN A 544 REMARK 465 ASP A 545 REMARK 465 GLY A 546 REMARK 465 TYR A 547 REMARK 465 VAL A 548 REMARK 465 THR A 549 REMARK 465 TYR A 550 REMARK 465 SER A 551 REMARK 465 GLU A 552 REMARK 465 PHE A 553 REMARK 465 THR A 554 REMARK 465 ALA A 555 REMARK 465 THR A 556 REMARK 465 LYS A 557 REMARK 465 GLU A 558 REMARK 465 ASP A 559 REMARK 465 VAL A 560 REMARK 465 ASP A 561 REMARK 465 GLU A 562 REMARK 465 GLY A 563 REMARK 465 TRP A 564 REMARK 465 ILE A 565 REMARK 465 GLY B 326 REMARK 465 ILE B 327 REMARK 465 GLN B 328 REMARK 465 PRO B 329 REMARK 465 ASN B 365 REMARK 465 VAL B 366 REMARK 465 ALA B 367 REMARK 465 PRO B 368 REMARK 465 GLY B 369 REMARK 465 GLU B 370 REMARK 465 GLY B 371 REMARK 465 SER B 372 REMARK 465 ALA B 392 REMARK 465 GLN B 393 REMARK 465 ASN B 394 REMARK 465 SER B 395 REMARK 465 ARG B 396 REMARK 465 HIS B 397 REMARK 465 VAL B 398 REMARK 465 GLN B 399 REMARK 465 GLY B 400 REMARK 465 ARG B 401 REMARK 465 ALA B 402 REMARK 465 GLY B 428 REMARK 465 GLU B 429 REMARK 465 SER B 430 REMARK 465 SER B 431 REMARK 465 ILE B 432 REMARK 465 GLY B 433 REMARK 465 GLY B 434 REMARK 465 GLU B 435 REMARK 465 GLY B 436 REMARK 465 GLU B 531 REMARK 465 ARG B 532 REMARK 465 ALA B 533 REMARK 465 ALA B 534 REMARK 465 ALA B 535 REMARK 465 LYS B 536 REMARK 465 ALA B 537 REMARK 465 SER B 538 REMARK 465 LYS B 539 REMARK 465 ALA B 540 REMARK 465 ASN B 541 REMARK 465 THR B 542 REMARK 465 SER B 543 REMARK 465 ASN B 544 REMARK 465 ASP B 545 REMARK 465 GLY B 546 REMARK 465 TYR B 547 REMARK 465 VAL B 548 REMARK 465 THR B 549 REMARK 465 TYR B 550 REMARK 465 SER B 551 REMARK 465 GLU B 552 REMARK 465 PHE B 553 REMARK 465 THR B 554 REMARK 465 ALA B 555 REMARK 465 THR B 556 REMARK 465 LYS B 557 REMARK 465 GLU B 558 REMARK 465 ASP B 559 REMARK 465 VAL B 560 REMARK 465 ASP B 561 REMARK 465 GLU B 562 REMARK 465 GLY B 563 REMARK 465 TRP B 564 REMARK 465 ILE B 565 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 470 THR A 364 OG1 CG2 REMARK 470 LYS A 373 CG CD CE NZ REMARK 470 GLU A 403 CG CD OE1 OE2 REMARK 470 TYR A 404 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 409 CG CD OE1 OE2 REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 ASP A 498 CG OD1 OD2 REMARK 470 GLU A 531 CG CD OE1 OE2 REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 THR B 364 OG1 CG2 REMARK 470 LYS B 373 CG CD CE NZ REMARK 470 GLU B 403 CG CD OE1 OE2 REMARK 470 TYR B 404 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 409 CG CD OE1 OE2 REMARK 470 LYS B 502 CG CD CE NZ REMARK 470 ASN B 503 CG OD1 ND2 REMARK 470 MET B 504 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 447 78.48 65.19 REMARK 500 MET A 504 -21.16 -157.28 REMARK 500 LYS B 438 -106.33 55.90 REMARK 500 ASP B 447 78.18 64.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 339 OD1 REMARK 620 2 ASP A 339 OD2 45.6 REMARK 620 3 LEU A 340 O 86.5 96.4 REMARK 620 4 GLU A 341 OE2 132.8 87.5 107.7 REMARK 620 5 HOH A 717 O 64.7 109.0 64.2 161.9 REMARK 620 6 HOH A 707 O 129.2 173.4 78.4 97.9 65.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 339 OD1 REMARK 620 2 HIS A 446 O 172.4 REMARK 620 3 ASP A 451 OD2 106.9 74.2 REMARK 620 4 HOH A 717 O 65.9 121.6 81.6 REMARK 620 5 HOH A 705 O 111.1 73.1 126.1 80.5 REMARK 620 6 HOH A 713 O 76.7 99.1 155.0 121.0 72.2 REMARK 620 7 HOH A 716 O 84.4 88.6 75.3 134.9 143.8 80.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 339 OD1 REMARK 620 2 HIS B 446 O 161.2 REMARK 620 3 ASP B 451 OD2 102.8 78.4 REMARK 620 4 HOH B 705 O 77.4 85.1 73.6 REMARK 620 5 HOH B 707 O 67.3 131.5 89.6 136.2 REMARK 620 6 HOH B 706 O 76.7 92.4 148.5 75.7 117.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 339 OD1 REMARK 620 2 ASP B 339 OD2 45.7 REMARK 620 3 LEU B 340 O 87.1 97.1 REMARK 620 4 GLU B 341 OE2 125.3 80.0 95.6 REMARK 620 5 HOH B 707 O 77.7 122.3 64.5 150.3 REMARK 620 6 HOH B 715 O 83.9 73.1 169.8 85.8 117.8 REMARK 620 7 HOH B 716 O 135.0 176.9 80.1 98.9 57.7 109.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 602 DBREF 4WBQ A 326 565 UNP A5JQJ3 A5JQJ3_NEUCS 326 565 DBREF 4WBQ B 326 565 UNP A5JQJ3 A5JQJ3_NEUCS 326 565 SEQRES 1 A 240 GLY ILE GLN PRO GLU LYS SER VAL VAL PHE VAL ALA ILE SEQRES 2 A 240 ASP LEU GLU ALA TYR GLU LEU ASP GLN SER ILE ILE THR SEQRES 3 A 240 GLU VAL GLY LEU ALA ILE LEU ASP THR ALA GLU ILE THR SEQRES 4 A 240 ASN VAL ALA PRO GLY GLU GLY SER LYS ASN TRP PHE ASP SEQRES 5 A 240 PHE ILE LYS ALA ARG HIS ILE ARG VAL LYS GLU PHE SER SEQRES 6 A 240 TRP ALA GLN ASN SER ARG HIS VAL GLN GLY ARG ALA GLU SEQRES 7 A 240 TYR PHE ASP PHE GLY GLU SER GLU PHE ILE GLU VAL ALA SEQRES 8 A 240 LYS ILE ALA SER VAL LEU LYS GLU THR ILE GLU GLY GLU SEQRES 9 A 240 SER SER ILE GLY GLY GLU GLY ALA LYS ARG PRO VAL VAL SEQRES 10 A 240 LEU VAL PHE HIS ASP GLN SER GLN ASP LEU LYS TYR ILE SEQRES 11 A 240 ARG MET LEU GLY TYR ASP VAL ALA SER ALA ASP ASN ILE SEQRES 12 A 240 LEU GLU VAL VAL ASP THR ARG GLU MET TYR GLN TYR LEU SEQRES 13 A 240 SER ARG SER ASN ASN ALA SER LYS LEU SER ASN VAL CYS SEQRES 14 A 240 GLY TYR LEU ASP ILE PRO TRP LYS ASN MET HIS ASN ALA SEQRES 15 A 240 GLY ASN ASP ALA VAL TYR THR LEU GLN ALA MET MET GLY SEQRES 16 A 240 LEU ALA ILE ASP MET ARG GLN LYS SER LEU GLU ARG ALA SEQRES 17 A 240 ALA ALA LYS ALA SER LYS ALA ASN THR SER ASN ASP GLY SEQRES 18 A 240 TYR VAL THR TYR SER GLU PHE THR ALA THR LYS GLU ASP SEQRES 19 A 240 VAL ASP GLU GLY TRP ILE SEQRES 1 B 240 GLY ILE GLN PRO GLU LYS SER VAL VAL PHE VAL ALA ILE SEQRES 2 B 240 ASP LEU GLU ALA TYR GLU LEU ASP GLN SER ILE ILE THR SEQRES 3 B 240 GLU VAL GLY LEU ALA ILE LEU ASP THR ALA GLU ILE THR SEQRES 4 B 240 ASN VAL ALA PRO GLY GLU GLY SER LYS ASN TRP PHE ASP SEQRES 5 B 240 PHE ILE LYS ALA ARG HIS ILE ARG VAL LYS GLU PHE SER SEQRES 6 B 240 TRP ALA GLN ASN SER ARG HIS VAL GLN GLY ARG ALA GLU SEQRES 7 B 240 TYR PHE ASP PHE GLY GLU SER GLU PHE ILE GLU VAL ALA SEQRES 8 B 240 LYS ILE ALA SER VAL LEU LYS GLU THR ILE GLU GLY GLU SEQRES 9 B 240 SER SER ILE GLY GLY GLU GLY ALA LYS ARG PRO VAL VAL SEQRES 10 B 240 LEU VAL PHE HIS ASP GLN SER GLN ASP LEU LYS TYR ILE SEQRES 11 B 240 ARG MET LEU GLY TYR ASP VAL ALA SER ALA ASP ASN ILE SEQRES 12 B 240 LEU GLU VAL VAL ASP THR ARG GLU MET TYR GLN TYR LEU SEQRES 13 B 240 SER ARG SER ASN ASN ALA SER LYS LEU SER ASN VAL CYS SEQRES 14 B 240 GLY TYR LEU ASP ILE PRO TRP LYS ASN MET HIS ASN ALA SEQRES 15 B 240 GLY ASN ASP ALA VAL TYR THR LEU GLN ALA MET MET GLY SEQRES 16 B 240 LEU ALA ILE ASP MET ARG GLN LYS SER LEU GLU ARG ALA SEQRES 17 B 240 ALA ALA LYS ALA SER LYS ALA ASN THR SER ASN ASP GLY SEQRES 18 B 240 TYR VAL THR TYR SER GLU PHE THR ALA THR LYS GLU ASP SEQRES 19 B 240 VAL ASP GLU GLY TRP ILE HET CA A 601 1 HET CA A 602 1 HET CA B 601 1 HET CA B 602 1 HETNAM CA CALCIUM ION FORMUL 3 CA 4(CA 2+) FORMUL 7 HOH *33(H2 O) HELIX 1 AA1 ALA A 361 THR A 364 5 4 HELIX 2 AA2 ASN A 374 ASP A 377 5 4 HELIX 3 AA3 GLU A 388 SER A 390 5 3 HELIX 4 AA4 GLU A 414 GLY A 428 1 15 HELIX 5 AA5 ASP A 447 LEU A 458 1 12 HELIX 6 AA6 ASP A 461 ALA A 465 5 5 HELIX 7 AA7 THR A 474 LEU A 481 1 8 HELIX 8 AA8 SER A 484 ASP A 498 1 15 HELIX 9 AA9 ASN A 506 LEU A 530 1 25 HELIX 10 AB1 ALA B 361 THR B 364 5 4 HELIX 11 AB2 ASN B 374 ASP B 377 5 4 HELIX 12 AB3 VAL B 415 GLU B 427 1 13 HELIX 13 AB4 ASP B 447 LEU B 458 1 12 HELIX 14 AB5 ASP B 461 ALA B 465 5 5 HELIX 15 AB6 THR B 474 LEU B 481 1 8 HELIX 16 AB7 SER B 484 ASP B 498 1 15 HELIX 17 AB8 ASN B 506 LEU B 530 1 25 SHEET 1 AA1 6 GLU A 411 ILE A 413 0 SHEET 2 AA1 6 ILE A 379 VAL A 386 1 N ARG A 385 O GLU A 411 SHEET 3 AA1 6 ASP A 346 ASP A 359 -1 N ILE A 357 O LYS A 380 SHEET 4 AA1 6 VAL A 334 TYR A 343 -1 N ASP A 339 O GLY A 354 SHEET 5 AA1 6 VAL A 441 PHE A 445 1 O VAL A 442 N VAL A 336 SHEET 6 AA1 6 ILE A 468 ASP A 473 1 O VAL A 472 N PHE A 445 SHEET 1 AA2 6 GLU B 411 GLU B 414 0 SHEET 2 AA2 6 ILE B 379 LYS B 387 1 N HIS B 383 O GLU B 411 SHEET 3 AA2 6 ASP B 346 ASP B 359 -1 N ILE B 357 O LYS B 380 SHEET 4 AA2 6 VAL B 334 TYR B 343 -1 N ASP B 339 O GLY B 354 SHEET 5 AA2 6 VAL B 441 PHE B 445 1 O VAL B 442 N VAL B 336 SHEET 6 AA2 6 ILE B 468 ASP B 473 1 O VAL B 472 N LEU B 443 LINK OD1 ASP A 339 CA CA A 602 1555 1555 2.57 LINK OD1 ASP A 339 CA CA A 601 1555 1555 2.60 LINK OD2 ASP A 339 CA CA A 602 1555 1555 3.00 LINK O LEU A 340 CA CA A 602 1555 1555 2.72 LINK OE2 GLU A 341 CA CA A 602 1555 1555 2.45 LINK O HIS A 446 CA CA A 601 1555 1555 2.48 LINK OD2 ASP A 451 CA CA A 601 1555 1555 2.39 LINK OD1 ASP B 339 CA CA B 602 1555 1555 2.66 LINK OD1 ASP B 339 CA CA B 601 1555 1555 2.49 LINK OD2 ASP B 339 CA CA B 601 1555 1555 3.02 LINK O LEU B 340 CA CA B 601 1555 1555 2.56 LINK OE2 GLU B 341 CA CA B 601 1555 1555 2.60 LINK O HIS B 446 CA CA B 602 1555 1555 2.46 LINK OD2 ASP B 451 CA CA B 602 1555 1555 2.29 LINK CA CA A 601 O HOH A 717 1555 1555 2.72 LINK CA CA A 601 O HOH A 705 1555 1555 2.52 LINK CA CA A 601 O HOH A 713 1555 1555 2.86 LINK CA CA A 601 O HOH A 716 1555 1555 2.46 LINK CA CA A 602 O HOH A 717 1555 1555 2.82 LINK CA CA A 602 O HOH A 707 1555 1555 2.43 LINK CA CA B 601 O HOH B 707 1555 1555 2.50 LINK CA CA B 601 O HOH B 715 1555 1555 2.57 LINK CA CA B 601 O HOH B 716 1555 1555 2.46 LINK CA CA B 602 O HOH B 705 1555 1555 2.46 LINK CA CA B 602 O HOH B 707 1555 1555 2.97 LINK CA CA B 602 O HOH B 706 1555 1555 2.56 SITE 1 AC1 7 ASP A 339 HIS A 446 ASP A 451 HOH A 705 SITE 2 AC1 7 HOH A 713 HOH A 716 HOH A 717 SITE 1 AC2 5 ASP A 339 LEU A 340 GLU A 341 HOH A 707 SITE 2 AC2 5 HOH A 717 SITE 1 AC3 6 ASP B 339 LEU B 340 GLU B 341 HOH B 707 SITE 2 AC3 6 HOH B 715 HOH B 716 SITE 1 AC4 6 ASP B 339 HIS B 446 ASP B 451 HOH B 705 SITE 2 AC4 6 HOH B 706 HOH B 707 CRYST1 77.040 77.040 112.310 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012980 0.007494 0.000000 0.00000 SCALE2 0.000000 0.014988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008904 0.00000