HEADER HYDROLASE 04-SEP-14 4WCJ TITLE STRUCTURE OF ICAB FROM AMMONIFEX DEGENSII COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYSACCHARIDE DEACETYLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: LOOP (RESIDUES 50-64) WAS DELETED FROM THE CONSTRUCT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AMMONIFEX DEGENSII; SOURCE 3 ORGANISM_TAXID: 429009; SOURCE 4 STRAIN: DSM 10501 / KC4; SOURCE 5 GENE: ADEG_0846; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS DEACETYLASE, BETA ALPHA BARREL, CARBOHYDRATE BINDING, FAMILY 4 KEYWDS 2 CARBOHYDRATE ESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.LITTLE,N.C.BAMFORD,V.POKROVSKAYA,H.ROBINSON,M.NITZ,P.L.HOWELL REVDAT 4 27-SEP-23 4WCJ 1 REMARK LINK REVDAT 3 08-JAN-20 4WCJ 1 SOURCE JRNL REMARK REVDAT 2 07-JAN-15 4WCJ 1 JRNL REVDAT 1 12-NOV-14 4WCJ 0 JRNL AUTH D.J.LITTLE,N.C.BAMFORD,V.POKROVSKAYA,H.ROBINSON,M.NITZ, JRNL AUTH 2 P.L.HOWELL JRNL TITL STRUCTURAL BASIS FOR THE DE-N-ACETYLATION OF JRNL TITL 2 POLY-BETA-1,6-N-ACETYL-D-GLUCOSAMINE IN GRAM-POSITIVE JRNL TITL 3 BACTERIA. JRNL REF J.BIOL.CHEM. V. 289 35907 2014 JRNL REFN ESSN 1083-351X JRNL PMID 25359777 JRNL DOI 10.1074/JBC.M114.611400 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1760) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.140 REMARK 3 FREE R VALUE TEST SET COUNT : 2002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.5189 - 4.0930 1.00 1895 147 0.1453 0.1608 REMARK 3 2 4.0930 - 3.2496 1.00 1876 150 0.1610 0.2110 REMARK 3 3 3.2496 - 2.8391 1.00 1864 144 0.2055 0.2216 REMARK 3 4 2.8391 - 2.5796 1.00 1867 140 0.2188 0.2635 REMARK 3 5 2.5796 - 2.3948 1.00 1858 139 0.2371 0.2802 REMARK 3 6 2.3948 - 2.2536 1.00 1850 147 0.2436 0.2666 REMARK 3 7 2.2536 - 2.1408 1.00 1870 139 0.2488 0.3118 REMARK 3 8 2.1408 - 2.0476 1.00 1840 145 0.2637 0.2581 REMARK 3 9 2.0476 - 1.9688 1.00 1856 143 0.2743 0.2966 REMARK 3 10 1.9688 - 1.9008 1.00 1839 141 0.2801 0.2654 REMARK 3 11 1.9008 - 1.8414 1.00 1832 138 0.2926 0.3110 REMARK 3 12 1.8414 - 1.7888 1.00 1878 140 0.3002 0.3029 REMARK 3 13 1.7888 - 1.7417 1.00 1853 146 0.3112 0.3621 REMARK 3 14 1.7417 - 1.6992 1.00 1841 143 0.3196 0.3435 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1915 REMARK 3 ANGLE : 1.085 2603 REMARK 3 CHIRALITY : 0.040 281 REMARK 3 PLANARITY : 0.006 333 REMARK 3 DIHEDRAL : 13.288 686 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 175.4728 18.3655 79.2510 REMARK 3 T TENSOR REMARK 3 T11: 0.9387 T22: 0.2856 REMARK 3 T33: 0.5426 T12: 0.1228 REMARK 3 T13: -0.2139 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 3.1844 L22: 0.3657 REMARK 3 L33: 1.7793 L12: 0.6413 REMARK 3 L13: -1.7040 L23: -0.7924 REMARK 3 S TENSOR REMARK 3 S11: -0.1454 S12: -0.2259 S13: -0.9007 REMARK 3 S21: 1.4727 S22: -0.0129 S23: -0.7940 REMARK 3 S31: 0.1583 S32: 0.3832 S33: 0.0763 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 160.4601 21.1627 75.0570 REMARK 3 T TENSOR REMARK 3 T11: 0.9572 T22: 0.2803 REMARK 3 T33: 0.4480 T12: 0.2290 REMARK 3 T13: 0.3320 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 3.0817 L22: 1.2992 REMARK 3 L33: 2.5069 L12: 0.7815 REMARK 3 L13: 0.1209 L23: 1.6123 REMARK 3 S TENSOR REMARK 3 S11: -0.3343 S12: -0.0714 S13: -0.4798 REMARK 3 S21: 1.7908 S22: 0.6929 S23: 0.5309 REMARK 3 S31: 0.3572 S32: -0.2248 S33: 0.3917 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 178.1647 29.1444 78.2830 REMARK 3 T TENSOR REMARK 3 T11: 1.1573 T22: 0.1480 REMARK 3 T33: 0.4464 T12: 0.2149 REMARK 3 T13: -0.4549 T23: -0.3323 REMARK 3 L TENSOR REMARK 3 L11: 0.7524 L22: 0.6006 REMARK 3 L33: 0.8498 L12: 0.3088 REMARK 3 L13: -0.2872 L23: -0.0501 REMARK 3 S TENSOR REMARK 3 S11: -0.1624 S12: -0.2238 S13: 0.1324 REMARK 3 S21: 1.8425 S22: 0.6031 S23: -0.8498 REMARK 3 S31: -0.2114 S32: -0.1507 S33: 0.6720 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 159.6365 30.6219 69.1113 REMARK 3 T TENSOR REMARK 3 T11: 0.4490 T22: 0.2328 REMARK 3 T33: 0.3140 T12: 0.0678 REMARK 3 T13: 0.1661 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 8.1095 L22: 3.2354 REMARK 3 L33: 3.9420 L12: -2.2751 REMARK 3 L13: -4.4480 L23: 3.2064 REMARK 3 S TENSOR REMARK 3 S11: -0.3365 S12: 0.0617 S13: 0.0441 REMARK 3 S21: 0.9454 S22: 0.2405 S23: 0.8778 REMARK 3 S31: 0.0621 S32: -0.3947 S33: 0.1753 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 166.9604 27.9241 62.7404 REMARK 3 T TENSOR REMARK 3 T11: 0.3661 T22: 0.1322 REMARK 3 T33: 0.1839 T12: -0.0298 REMARK 3 T13: 0.0256 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 5.5931 L22: 2.0942 REMARK 3 L33: 4.3888 L12: -0.3163 REMARK 3 L13: -0.7962 L23: 1.0204 REMARK 3 S TENSOR REMARK 3 S11: -0.1221 S12: 0.3348 S13: -0.0990 REMARK 3 S21: 0.5259 S22: 0.3562 S23: 0.0096 REMARK 3 S31: 0.2920 S32: 0.1834 S33: -0.1930 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 163.4485 33.6763 61.0809 REMARK 3 T TENSOR REMARK 3 T11: 0.2625 T22: 0.2766 REMARK 3 T33: 0.2301 T12: 0.0050 REMARK 3 T13: 0.0616 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 5.8065 L22: 4.6570 REMARK 3 L33: 6.6932 L12: 4.8497 REMARK 3 L13: 4.9353 L23: 5.3394 REMARK 3 S TENSOR REMARK 3 S11: -0.2159 S12: 0.3789 S13: 0.2305 REMARK 3 S21: 0.2661 S22: 0.1268 S23: 0.5551 REMARK 3 S31: -0.2063 S32: -0.1522 S33: 0.0736 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 173.9686 20.0031 57.2049 REMARK 3 T TENSOR REMARK 3 T11: 0.2550 T22: 0.3848 REMARK 3 T33: 0.4572 T12: -0.0477 REMARK 3 T13: 0.0857 T23: -0.2102 REMARK 3 L TENSOR REMARK 3 L11: 1.0448 L22: 9.0036 REMARK 3 L33: 3.9098 L12: -0.9666 REMARK 3 L13: 0.9894 L23: 0.8697 REMARK 3 S TENSOR REMARK 3 S11: -0.0908 S12: 0.5391 S13: -0.6074 REMARK 3 S21: -0.3248 S22: 0.1404 S23: -0.0933 REMARK 3 S31: 0.4684 S32: 0.3072 S33: 0.0172 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 179.9993 25.7246 52.1860 REMARK 3 T TENSOR REMARK 3 T11: 0.3170 T22: 0.4986 REMARK 3 T33: 0.5255 T12: -0.1072 REMARK 3 T13: 0.1643 T23: -0.2226 REMARK 3 L TENSOR REMARK 3 L11: 2.5608 L22: 6.4445 REMARK 3 L33: 2.4555 L12: -3.8629 REMARK 3 L13: -1.0450 L23: 1.0424 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 1.0280 S13: -0.2562 REMARK 3 S21: -0.8421 S22: 0.0140 S23: -0.6897 REMARK 3 S31: 0.1419 S32: 0.0331 S33: -0.1657 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 183.2748 24.6837 62.2006 REMARK 3 T TENSOR REMARK 3 T11: 0.2853 T22: 0.2807 REMARK 3 T33: 0.4923 T12: -0.0079 REMARK 3 T13: -0.0550 T23: -0.1351 REMARK 3 L TENSOR REMARK 3 L11: 2.4999 L22: 3.8062 REMARK 3 L33: 2.1345 L12: -2.5861 REMARK 3 L13: -0.6638 L23: -0.6151 REMARK 3 S TENSOR REMARK 3 S11: -0.1243 S12: 0.0526 S13: 0.1581 REMARK 3 S21: 0.2186 S22: 0.0658 S23: -0.8667 REMARK 3 S31: -0.2015 S32: 0.1193 S33: 0.0569 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 176.0262 17.5904 77.5177 REMARK 3 T TENSOR REMARK 3 T11: 0.7860 T22: 0.2347 REMARK 3 T33: 0.5537 T12: 0.1411 REMARK 3 T13: -0.1694 T23: -0.0649 REMARK 3 L TENSOR REMARK 3 L11: 4.7798 L22: 1.5681 REMARK 3 L33: 2.0637 L12: 0.6269 REMARK 3 L13: 0.1629 L23: -0.3014 REMARK 3 S TENSOR REMARK 3 S11: -0.2315 S12: -0.2029 S13: -0.6776 REMARK 3 S21: 1.5366 S22: 0.3515 S23: -0.8541 REMARK 3 S31: 0.0954 S32: 0.0927 S33: -0.0228 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WCJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203479. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28034 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 60.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4F9D REMARK 200 REMARK 200 REMARK: SMALL OCTAHEDRON REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG MME 2000, 0.1 M BIS-TRIS, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.34300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.34300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.97000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.34300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.34300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.97000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 42.34300 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 42.34300 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 35.97000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 42.34300 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 42.34300 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 35.97000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 LEU A 15 REMARK 465 VAL A 16 REMARK 465 PRO A 17 REMARK 465 ARG A 18 REMARK 465 GLY A 19 REMARK 465 SER A 20 REMARK 465 HIS A 21 REMARK 465 MET A 22 REMARK 465 GLU A 23 REMARK 465 SER A 24 REMARK 465 PRO A 25 REMARK 465 ARG A 26 REMARK 465 THR A 27 REMARK 465 PRO A 28 REMARK 465 ALA A 29 REMARK 465 GLY A 30 REMARK 465 SER A 279 REMARK 465 PRO A 280 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 GLN A 277 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 96 O HOH A 502 2.12 REMARK 500 O GLY A 85 O HOH A 505 2.17 REMARK 500 O HOH A 517 O HOH A 526 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 44 -66.40 -123.83 REMARK 500 LEU A 104 -157.54 57.21 REMARK 500 ASP A 115 -60.22 117.50 REMARK 500 THR A 174 164.09 62.05 REMARK 500 ASP A 176 59.42 -155.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 513 DISTANCE = 5.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 115 OD1 REMARK 620 2 HIS A 173 NE2 91.7 REMARK 620 3 HIS A 178 NE2 101.4 96.7 REMARK 620 4 HOH A 463 O 117.7 95.3 138.6 REMARK 620 5 HOH A 488 O 87.0 169.0 94.3 75.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 302 DBREF 4WCJ A 23 280 UNP C9RCK9 C9RCK9_AMMDK 23 280 SEQADV 4WCJ MET A 2 UNP C9RCK9 INITIATING METHIONINE SEQADV 4WCJ GLY A 3 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ SER A 4 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ SER A 5 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 6 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 7 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 8 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 9 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 10 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 11 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ SER A 12 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ SER A 13 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ GLY A 14 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ LEU A 15 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ VAL A 16 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ PRO A 17 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ ARG A 18 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ GLY A 19 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ SER A 20 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ HIS A 21 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ MET A 22 UNP C9RCK9 EXPRESSION TAG SEQADV 4WCJ A UNP C9RCK9 TRP 50 DELETION SEQADV 4WCJ A UNP C9RCK9 ALA 51 DELETION SEQADV 4WCJ A UNP C9RCK9 LEU 52 DELETION SEQADV 4WCJ A UNP C9RCK9 HIS 53 DELETION SEQADV 4WCJ A UNP C9RCK9 TRP 54 DELETION SEQADV 4WCJ A UNP C9RCK9 GLY 55 DELETION SEQADV 4WCJ A UNP C9RCK9 ARG 56 DELETION SEQADV 4WCJ A UNP C9RCK9 LEU 57 DELETION SEQADV 4WCJ A UNP C9RCK9 PHE 58 DELETION SEQADV 4WCJ A UNP C9RCK9 TRP 59 DELETION SEQADV 4WCJ A UNP C9RCK9 ARG 60 DELETION SEQADV 4WCJ A UNP C9RCK9 SER 61 DELETION SEQADV 4WCJ A UNP C9RCK9 ASN 62 DELETION SEQADV 4WCJ A UNP C9RCK9 GLU 63 DELETION SEQADV 4WCJ A UNP C9RCK9 LEU 64 DELETION SEQRES 1 A 264 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 264 LEU VAL PRO ARG GLY SER HIS MET GLU SER PRO ARG THR SEQRES 3 A 264 PRO ALA GLY THR HIS LEU GLN GLY ASP GLY LEU VAL VAL SEQRES 4 A 264 LEU CYS TYR HIS ARG VAL LEU PRO SER SER ARG TYR ALA SEQRES 5 A 264 ILE SER ARG ARG GLU PHE ALA GLN GLN LEU ASP TYR LEU SEQRES 6 A 264 ARG GLN VAL GLY VAL ARG PHE VAL THR PRO GLN GLU ALA SEQRES 7 A 264 GLU ASP TYR LEU ALA GLY ARG ILE HIS LEU PRO GLY LYS SEQRES 8 A 264 LEU VAL LEU VAL THR PHE ASP ASP GLY ASP LEU SER VAL SEQRES 9 A 264 TYR ARG HIS ALA PHE PRO VAL LEU LYS LYS ARG LYS ILE SEQRES 10 A 264 PRO PHE LEU PHE PHE VAL ILE ALA GLY GLN VAL GLY ARG SEQRES 11 A 264 LYS TRP GLU GLY PHE SER MET CYS SER TRP GLU GLN ILE SEQRES 12 A 264 LYS GLU MET VAL ALA SER GLY LEU CYS VAL VAL GLY LEU SEQRES 13 A 264 HIS THR TYR ASP LEU HIS TYR TRP ASP SER GLN ALA LYS SEQRES 14 A 264 LYS PRO VAL PHE LEU LEU PRO GLY ARG GLU ARG LEU PHE SEQRES 15 A 264 ALA GLU ASP THR ALA ARG GLY THR ALA CYS LEU LYS GLU SEQRES 16 A 264 HIS LEU GLY LEU LYS THR ARG TYR PHE ALA TYR PRO TYR SEQRES 17 A 264 GLY PHE GLY THR PRO THR THR ASP GLU ILE LEU ARG THR SEQRES 18 A 264 GLN GLY PHE SER LEU VAL PHE THR LEU ARG ALA LYS VAL SEQRES 19 A 264 ASN ARG PRO GLY ASP ALA PRO PHE VAL GLY ARG VAL LEU SEQRES 20 A 264 VAL THR PRO ASP SER TRP PRO GLN VAL ALA ALA TRP ALA SEQRES 21 A 264 GLN ALA SER PRO HET ZN A 301 1 HET CL A 302 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 ZN ZN 2+ FORMUL 3 CL CL 1- FORMUL 4 HOH *132(H2 O) HELIX 1 AA1 SER A 70 VAL A 84 1 15 HELIX 2 AA2 THR A 90 ALA A 99 1 10 HELIX 3 AA3 ASP A 117 HIS A 123 1 7 HELIX 4 AA4 HIS A 123 ARG A 131 1 9 HELIX 5 AA5 ALA A 141 VAL A 144 5 4 HELIX 6 AA6 SER A 155 SER A 165 1 11 HELIX 7 AA7 PHE A 189 LEU A 191 5 3 HELIX 8 AA8 ARG A 194 GLY A 214 1 21 HELIX 9 AA9 PRO A 223 PHE A 226 5 4 HELIX 10 AB1 THR A 228 GLN A 238 1 11 HELIX 11 AB2 SER A 268 ALA A 278 1 11 SHEET 1 AA1 9 ARG A 87 PHE A 88 0 SHEET 2 AA1 9 LYS A 107 ASP A 115 1 O VAL A 109 N ARG A 87 SHEET 3 AA1 9 PHE A 135 VAL A 139 1 O PHE A 138 N PHE A 113 SHEET 4 AA1 9 CYS A 168 LEU A 172 1 O VAL A 169 N PHE A 137 SHEET 5 AA1 9 TYR A 219 ALA A 221 1 O TYR A 219 N LEU A 172 SHEET 6 AA1 9 LEU A 242 THR A 245 1 O PHE A 244 N PHE A 220 SHEET 7 AA1 9 PHE A 258 LEU A 263 1 O VAL A 259 N THR A 245 SHEET 8 AA1 9 GLY A 37 TYR A 43 1 N VAL A 40 O VAL A 262 SHEET 9 AA1 9 LYS A 107 ASP A 115 1 O LEU A 108 N GLY A 37 SHEET 1 AA2 2 ARG A 45 VAL A 46 0 SHEET 2 AA2 2 ALA A 68 ILE A 69 1 O ILE A 69 N ARG A 45 SHEET 1 AA3 2 LYS A 147 TRP A 148 0 SHEET 2 AA3 2 PHE A 151 SER A 152 -1 O PHE A 151 N TRP A 148 SHEET 1 AA4 2 TRP A 180 ASP A 181 0 SHEET 2 AA4 2 LYS A 186 PRO A 187 -1 O LYS A 186 N ASP A 181 LINK OD1 ASP A 115 ZN ZN A 301 1555 1555 2.17 LINK NE2 HIS A 173 ZN ZN A 301 1555 1555 2.14 LINK NE2 HIS A 178 ZN ZN A 301 1555 1555 2.18 LINK ZN ZN A 301 O HOH A 463 1555 1555 2.31 LINK ZN ZN A 301 O HOH A 488 1555 1555 2.24 CISPEP 1 LEU A 104 PRO A 105 0 -19.41 CISPEP 2 ALA A 256 PRO A 257 0 7.22 SITE 1 AC1 6 ASP A 115 HIS A 173 HIS A 178 HOH A 463 SITE 2 AC1 6 HOH A 473 HOH A 488 SITE 1 AC2 1 SER A 119 CRYST1 84.686 84.686 71.940 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011808 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013900 0.00000