HEADER HYDROLASE 14-SEP-14 4WFC TITLE STRUCTURE OF THE RRP6-RRP47 INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOSOME COMPLEX EXONUCLEASE RRP6; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: UNP RESIDUES 1-111; COMPND 5 SYNONYM: RIBOSOMAL RNA-PROCESSING PROTEIN 6; COMPND 6 EC: 3.1.13.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: EXOSOME COMPLEX PROTEIN LRP1; COMPND 10 CHAIN: B, D, F; COMPND 11 FRAGMENT: UNP RESIDUES 1-133; COMPND 12 SYNONYM: LIKE AN RRNA PROCESSING PROTEIN 1,YEAST C1D DOMAIN- COMPND 13 CONTAINING PROTEIN,RRNA PROCESSING PROTEIN 47; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: RRP6, UNC733, YOR001W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 10 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 11 ORGANISM_TAXID: 4932; SOURCE 12 GENE: LRP1, RRP47, YC1D, YHR081W; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RRP6-RRP47 COMPLEX, NUCLEAR EXOSOME, RNA DEGRADATION, RNA PROCESSING, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.SCHUCH,E.CONTI REVDAT 3 06-SEP-17 4WFC 1 REMARK HELIX SITE ATOM REVDAT 2 10-DEC-14 4WFC 1 JRNL REVDAT 1 29-OCT-14 4WFC 0 JRNL AUTH B.SCHUCH,M.FEIGENBUTZ,D.L.MAKINO,S.FALK,C.BASQUIN, JRNL AUTH 2 P.MITCHELL,E.CONTI JRNL TITL THE EXOSOME-BINDING FACTORS RRP6 AND RRP47 FORM A COMPOSITE JRNL TITL 2 SURFACE FOR RECRUITING THE MTR4 HELICASE. JRNL REF EMBO J. V. 33 2829 2014 JRNL REFN ESSN 1460-2075 JRNL PMID 25319414 JRNL DOI 10.15252/EMBJ.201488757 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.48 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 43544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4074 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.5120 - 7.2059 1.00 2670 143 0.1857 0.2315 REMARK 3 2 7.2059 - 5.7203 1.00 2680 141 0.2284 0.2486 REMARK 3 3 5.7203 - 4.9974 1.00 2671 138 0.1936 0.2369 REMARK 3 4 4.9974 - 4.5406 1.00 2699 149 0.1457 0.2003 REMARK 3 5 4.5406 - 4.2152 1.00 2653 145 0.1352 0.1710 REMARK 3 6 4.2152 - 3.9667 1.00 2670 145 0.1496 0.1895 REMARK 3 7 3.9667 - 3.7681 1.00 2647 140 0.1361 0.1956 REMARK 3 8 3.7681 - 3.6040 1.00 2711 138 0.1408 0.1836 REMARK 3 9 3.6040 - 3.4653 1.00 2679 144 0.1464 0.1856 REMARK 3 10 3.4653 - 3.3457 1.00 2681 135 0.1492 0.1824 REMARK 3 11 3.3457 - 3.2411 1.00 2659 137 0.1651 0.2274 REMARK 3 12 3.2411 - 3.1485 1.00 2683 141 0.1600 0.1878 REMARK 3 13 3.1485 - 3.0656 1.00 2680 149 0.1775 0.2511 REMARK 3 14 3.0656 - 2.9908 1.00 2678 135 0.1899 0.2423 REMARK 3 15 2.9908 - 2.9228 1.00 2684 141 0.1957 0.2235 REMARK 3 16 2.9228 - 2.8606 1.00 2679 140 0.1992 0.2363 REMARK 3 17 2.8606 - 2.8034 1.00 2634 143 0.2215 0.2774 REMARK 3 18 2.8034 - 2.7505 1.00 2682 143 0.2305 0.2718 REMARK 3 19 2.7505 - 2.7013 1.00 2700 142 0.2264 0.2575 REMARK 3 20 2.7013 - 2.6555 1.00 2636 141 0.2401 0.2545 REMARK 3 21 2.6555 - 2.6127 1.00 2699 142 0.2383 0.2922 REMARK 3 22 2.6127 - 2.5725 1.00 2697 117 0.2468 0.2790 REMARK 3 23 2.5725 - 2.5347 1.00 2642 152 0.2442 0.2384 REMARK 3 24 2.5347 - 2.4990 1.00 2728 122 0.2484 0.2628 REMARK 3 25 2.4990 - 2.4652 1.00 2662 134 0.2660 0.2906 REMARK 3 26 2.4652 - 2.4332 1.00 2670 168 0.2658 0.2744 REMARK 3 27 2.4332 - 2.4028 1.00 2643 132 0.2817 0.2773 REMARK 3 28 2.4028 - 2.3738 1.00 2726 126 0.2875 0.2810 REMARK 3 29 2.3738 - 2.3462 0.94 2481 151 0.3323 0.3624 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.65 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4363 REMARK 3 ANGLE : 1.038 5870 REMARK 3 CHIRALITY : 0.044 692 REMARK 3 PLANARITY : 0.005 752 REMARK 3 DIHEDRAL : 13.903 1628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.1506 -24.2493 39.3122 REMARK 3 T TENSOR REMARK 3 T11: 1.2594 T22: 1.3935 REMARK 3 T33: 0.9689 T12: -0.0369 REMARK 3 T13: -0.3474 T23: 0.2633 REMARK 3 L TENSOR REMARK 3 L11: 0.0047 L22: -0.0011 REMARK 3 L33: 0.0092 L12: 0.0001 REMARK 3 L13: 0.0044 L23: -0.0021 REMARK 3 S TENSOR REMARK 3 S11: -0.4572 S12: -0.4398 S13: 0.0463 REMARK 3 S21: 0.4248 S22: 0.2008 S23: 0.0183 REMARK 3 S31: 0.0553 S32: -0.1615 S33: 0.0006 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0440 -18.1475 39.4707 REMARK 3 T TENSOR REMARK 3 T11: 0.6115 T22: 0.4475 REMARK 3 T33: 0.4284 T12: -0.0358 REMARK 3 T13: -0.0048 T23: -0.0644 REMARK 3 L TENSOR REMARK 3 L11: 0.1555 L22: 0.6405 REMARK 3 L33: 0.5815 L12: 0.0563 REMARK 3 L13: 0.2283 L23: -0.2635 REMARK 3 S TENSOR REMARK 3 S11: -0.2295 S12: -1.1163 S13: -0.2496 REMARK 3 S21: 0.4207 S22: 0.1406 S23: 0.0477 REMARK 3 S31: -0.1225 S32: 0.5900 S33: -0.0007 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9762 -7.2743 34.9076 REMARK 3 T TENSOR REMARK 3 T11: 0.8925 T22: 0.5061 REMARK 3 T33: 0.6269 T12: 0.0899 REMARK 3 T13: 0.1285 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 0.9607 L22: 1.4152 REMARK 3 L33: 0.8949 L12: 0.6180 REMARK 3 L13: 0.8073 L23: 0.1397 REMARK 3 S TENSOR REMARK 3 S11: 0.3677 S12: -0.4544 S13: 0.5776 REMARK 3 S21: 0.0645 S22: -0.0528 S23: 0.2324 REMARK 3 S31: -1.1559 S32: -0.2447 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.1483 -15.0931 9.1902 REMARK 3 T TENSOR REMARK 3 T11: 0.8207 T22: 0.8078 REMARK 3 T33: 0.7400 T12: -0.0750 REMARK 3 T13: -0.1268 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 0.1646 L22: 0.0292 REMARK 3 L33: 0.0304 L12: 0.0426 REMARK 3 L13: 0.0263 L23: 0.0277 REMARK 3 S TENSOR REMARK 3 S11: -0.7149 S12: 0.5720 S13: 0.6203 REMARK 3 S21: -0.0131 S22: 0.4387 S23: -0.1697 REMARK 3 S31: -0.3006 S32: 0.2562 S33: 0.0022 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4173 -10.2730 39.9311 REMARK 3 T TENSOR REMARK 3 T11: 0.8859 T22: 0.5133 REMARK 3 T33: 0.6005 T12: -0.0907 REMARK 3 T13: 0.0825 T23: -0.1302 REMARK 3 L TENSOR REMARK 3 L11: 1.2090 L22: 1.0323 REMARK 3 L33: 0.7994 L12: -0.1090 REMARK 3 L13: 0.9484 L23: -0.1772 REMARK 3 S TENSOR REMARK 3 S11: 0.4408 S12: -0.7257 S13: 0.4124 REMARK 3 S21: 0.2951 S22: 0.0201 S23: 0.0263 REMARK 3 S31: -1.1825 S32: 0.7591 S33: -0.0016 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7582 -22.7185 25.1544 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.3012 REMARK 3 T33: 0.3193 T12: -0.0143 REMARK 3 T13: -0.0147 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.3497 L22: 3.2073 REMARK 3 L33: 1.7343 L12: 0.3681 REMARK 3 L13: 0.3865 L23: 0.0928 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: -0.0196 S13: 0.0570 REMARK 3 S21: -0.0094 S22: -0.0476 S23: -0.1796 REMARK 3 S31: -0.2606 S32: 0.0377 S33: 0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.1117 -43.1236 31.6694 REMARK 3 T TENSOR REMARK 3 T11: 0.5039 T22: 0.5722 REMARK 3 T33: 0.5649 T12: 0.1148 REMARK 3 T13: -0.0076 T23: 0.0735 REMARK 3 L TENSOR REMARK 3 L11: 0.2345 L22: 1.2426 REMARK 3 L33: 1.5360 L12: 0.2464 REMARK 3 L13: -0.3058 L23: 0.8191 REMARK 3 S TENSOR REMARK 3 S11: -0.3287 S12: -0.3869 S13: -0.3851 REMARK 3 S21: 0.5655 S22: 0.3143 S23: -0.3006 REMARK 3 S31: 0.2538 S32: 0.5605 S33: 0.0029 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 7 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3599 -15.6278 -15.5505 REMARK 3 T TENSOR REMARK 3 T11: 0.5715 T22: 0.4836 REMARK 3 T33: 0.4709 T12: 0.0516 REMARK 3 T13: -0.0645 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 1.9148 L22: 1.0964 REMARK 3 L33: 2.0821 L12: -1.0780 REMARK 3 L13: 0.4059 L23: 0.8431 REMARK 3 S TENSOR REMARK 3 S11: -0.3314 S12: 0.4193 S13: 0.2466 REMARK 3 S21: -0.8538 S22: 0.2964 S23: -0.4183 REMARK 3 S31: -0.0687 S32: -0.1773 S33: 0.0011 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 36 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6714 -12.4374 -3.8506 REMARK 3 T TENSOR REMARK 3 T11: 0.6325 T22: 0.5185 REMARK 3 T33: 0.5515 T12: 0.1899 REMARK 3 T13: 0.0019 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 0.2665 L22: 0.3652 REMARK 3 L33: 0.3923 L12: 0.4252 REMARK 3 L13: 0.4692 L23: 0.3632 REMARK 3 S TENSOR REMARK 3 S11: -0.2778 S12: -0.0879 S13: 0.2818 REMARK 3 S21: 0.5625 S22: 0.6932 S23: 0.6336 REMARK 3 S31: -1.1583 S32: -0.9241 S33: -0.0003 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9005 -22.1401 16.6760 REMARK 3 T TENSOR REMARK 3 T11: 0.7493 T22: 0.7011 REMARK 3 T33: 0.6386 T12: 0.1056 REMARK 3 T13: -0.0209 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 0.0187 L22: 0.1137 REMARK 3 L33: 0.1329 L12: 0.0179 REMARK 3 L13: 0.0444 L23: -0.0316 REMARK 3 S TENSOR REMARK 3 S11: 0.2627 S12: -0.1160 S13: -0.4205 REMARK 3 S21: -0.2570 S22: -0.1941 S23: 0.4132 REMARK 3 S31: -0.3492 S32: -0.2942 S33: 0.0046 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5754 -29.5141 6.7979 REMARK 3 T TENSOR REMARK 3 T11: 0.3251 T22: 0.3729 REMARK 3 T33: 0.3015 T12: -0.0114 REMARK 3 T13: 0.0174 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.6000 L22: 0.1953 REMARK 3 L33: 3.9380 L12: 0.3441 REMARK 3 L13: 0.0277 L23: 0.6060 REMARK 3 S TENSOR REMARK 3 S11: -0.1146 S12: 0.0299 S13: 0.0754 REMARK 3 S21: 0.2489 S22: 0.0577 S23: -0.0936 REMARK 3 S31: -0.3261 S32: -0.1510 S33: -0.0006 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 5 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7408 -18.6597 -13.6152 REMARK 3 T TENSOR REMARK 3 T11: 0.5708 T22: 0.6334 REMARK 3 T33: 0.5617 T12: 0.0532 REMARK 3 T13: -0.0905 T23: 0.0912 REMARK 3 L TENSOR REMARK 3 L11: 1.4412 L22: 1.2803 REMARK 3 L33: 0.5331 L12: -0.2107 REMARK 3 L13: 0.5252 L23: 0.5507 REMARK 3 S TENSOR REMARK 3 S11: -0.0744 S12: 0.4537 S13: 0.0870 REMARK 3 S21: -0.1880 S22: 0.5021 S23: 0.3561 REMARK 3 S31: -0.4317 S32: -1.3047 S33: -0.0002 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 29 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6915 -31.2218 -0.7342 REMARK 3 T TENSOR REMARK 3 T11: 0.3621 T22: 0.3674 REMARK 3 T33: 0.3368 T12: -0.0007 REMARK 3 T13: -0.0042 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 2.2600 L22: 1.7915 REMARK 3 L33: 2.4668 L12: -1.1135 REMARK 3 L13: -0.3387 L23: -1.3674 REMARK 3 S TENSOR REMARK 3 S11: -0.0113 S12: 0.1766 S13: -0.1767 REMARK 3 S21: -0.1797 S22: -0.0768 S23: 0.0507 REMARK 3 S31: 0.0795 S32: -0.0806 S33: 0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 5 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.1422 14.5860 16.0134 REMARK 3 T TENSOR REMARK 3 T11: 0.9468 T22: 0.9378 REMARK 3 T33: 1.3689 T12: 0.1782 REMARK 3 T13: -0.1180 T23: -0.2035 REMARK 3 L TENSOR REMARK 3 L11: 0.2987 L22: 0.2383 REMARK 3 L33: 0.2526 L12: 0.2948 REMARK 3 L13: -0.1174 L23: -0.1233 REMARK 3 S TENSOR REMARK 3 S11: -0.1646 S12: 0.3588 S13: -0.0289 REMARK 3 S21: -0.3144 S22: 0.0115 S23: 0.6129 REMARK 3 S31: 0.2546 S32: -0.7990 S33: 0.0001 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 26 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.7229 11.4729 30.9628 REMARK 3 T TENSOR REMARK 3 T11: 1.1079 T22: 0.9991 REMARK 3 T33: 1.6104 T12: 0.1081 REMARK 3 T13: 0.1484 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.0858 L22: 0.0947 REMARK 3 L33: 0.0653 L12: 0.0666 REMARK 3 L13: -0.0254 L23: 0.0527 REMARK 3 S TENSOR REMARK 3 S11: -0.2711 S12: -0.3687 S13: 0.3281 REMARK 3 S21: 0.5777 S22: 0.2923 S23: 1.0764 REMARK 3 S31: -0.1062 S32: -0.7092 S33: 0.0011 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 78 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.5660 15.4950 28.7305 REMARK 3 T TENSOR REMARK 3 T11: 1.0185 T22: 0.6883 REMARK 3 T33: 0.9851 T12: -0.0313 REMARK 3 T13: -0.1136 T23: -0.2911 REMARK 3 L TENSOR REMARK 3 L11: 0.4524 L22: 1.1943 REMARK 3 L33: 1.2238 L12: -0.0389 REMARK 3 L13: 0.4877 L23: -0.9598 REMARK 3 S TENSOR REMARK 3 S11: 0.2248 S12: -1.1561 S13: 0.4903 REMARK 3 S21: 0.5035 S22: 0.0869 S23: -0.4296 REMARK 3 S31: -0.9466 S32: 0.6385 S33: 0.0015 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 10 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.0053 7.6900 20.8766 REMARK 3 T TENSOR REMARK 3 T11: 1.2252 T22: 0.9461 REMARK 3 T33: 1.9015 T12: 0.0168 REMARK 3 T13: -0.0695 T23: -0.2464 REMARK 3 L TENSOR REMARK 3 L11: 0.0271 L22: 0.0037 REMARK 3 L33: 0.0079 L12: -0.0309 REMARK 3 L13: -0.0101 L23: 0.0291 REMARK 3 S TENSOR REMARK 3 S11: -0.0199 S12: 0.1059 S13: -0.2478 REMARK 3 S21: -0.4558 S22: -0.1747 S23: 0.9684 REMARK 3 S31: 0.3271 S32: -0.9992 S33: -0.0009 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 29 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.8165 9.4500 25.9726 REMARK 3 T TENSOR REMARK 3 T11: 0.9192 T22: 0.6251 REMARK 3 T33: 0.8996 T12: -0.0231 REMARK 3 T13: -0.0346 T23: -0.2018 REMARK 3 L TENSOR REMARK 3 L11: 0.6226 L22: 0.8170 REMARK 3 L33: 0.8441 L12: 0.6450 REMARK 3 L13: 0.2349 L23: 0.1160 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.3609 S13: 0.1246 REMARK 3 S21: 0.7661 S22: -0.0036 S23: 0.4563 REMARK 3 S31: 0.2093 S32: -0.2290 S33: 0.0001 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 68 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.0241 28.6609 27.6104 REMARK 3 T TENSOR REMARK 3 T11: 1.0882 T22: 1.0225 REMARK 3 T33: 1.9396 T12: 0.1188 REMARK 3 T13: 0.0708 T23: -0.4789 REMARK 3 L TENSOR REMARK 3 L11: 0.0500 L22: 0.0483 REMARK 3 L33: 0.0069 L12: 0.0323 REMARK 3 L13: 0.0044 L23: 0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: 0.0637 S13: -0.0598 REMARK 3 S21: 0.2096 S22: 0.1947 S23: -0.0391 REMARK 3 S31: 0.0708 S32: -0.1884 S33: -0.0006 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 74 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.0149 17.5015 17.8701 REMARK 3 T TENSOR REMARK 3 T11: 0.9087 T22: 0.7026 REMARK 3 T33: 1.0199 T12: -0.0046 REMARK 3 T13: -0.0892 T23: -0.1580 REMARK 3 L TENSOR REMARK 3 L11: 1.1224 L22: 1.2075 REMARK 3 L33: 1.3459 L12: 0.2648 REMARK 3 L13: 0.8121 L23: -0.7999 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: -0.2682 S13: 0.5372 REMARK 3 S21: -0.1872 S22: 0.1635 S23: -0.4587 REMARK 3 S31: -0.7577 S32: 0.4820 S33: 0.0003 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.4868 -31.0322 18.8561 REMARK 3 T TENSOR REMARK 3 T11: 0.3160 T22: 0.3491 REMARK 3 T33: 0.3047 T12: -0.0123 REMARK 3 T13: 0.0181 T23: 0.0239 REMARK 3 L TENSOR REMARK 3 L11: 1.5529 L22: 1.0658 REMARK 3 L33: 3.2440 L12: 1.2590 REMARK 3 L13: 0.1124 L23: -0.1564 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: 0.0897 S13: -0.0069 REMARK 3 S21: -0.1936 S22: -0.1240 S23: -0.0175 REMARK 3 S31: -0.1875 S32: -0.0538 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN C REMARK 3 ATOM PAIRS NUMBER : 842 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN B REMARK 3 SELECTION : CHAIN D REMARK 3 ATOM PAIRS NUMBER : 1375 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN B REMARK 3 SELECTION : CHAIN F REMARK 3 ATOM PAIRS NUMBER : 1375 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203690. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 0.3.5 REMARK 200 DATA SCALING SOFTWARE : AIMLESS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43613 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 88.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.02500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: THE STRUCTURE WAS SOLVED WITH DATA FROM A TA6BR14 REMARK 200 SOAKED CRYSTAL AT LOW RESOLUTION (5.2A) BY SAD WITH SHELX AND REMARK 200 HKL2MAP USING THE ANOMALOUS TA SIGNAL. IDENTIFIABLE ALPHA- REMARK 200 HELICES WERE MANUALLY PLACED AND USED AS A STARTING MODEL FOR REMARK 200 SAD-MR BY EXPLOITING THE ANOMALOUS SE SIGNAL FROM SE-MET REMARK 200 DERIVATISED CRYSTAL,USING THE PROGRAM PHENIX AUTOSOL. THE REMARK 200 STRUCTURE WAS FINALLY MODELLED AND REFINED USING THE NATIVED REMARK 200 DATA SUBMITTED. REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M AMMONIUM SULFATE, 125 MM SODIUM REMARK 280 CHLORIDE, 100 MM SODIUM CACODYLATE PH 5.8, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.00900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.00450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 156.01350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 104.00900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 156.01350 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.00450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -75.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 390 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 318 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 408 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 412 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 400 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 313 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 392 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 396 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 ASP A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 66 REMARK 465 PHE A 67 REMARK 465 GLU A 68 REMARK 465 LEU A 69 REMARK 465 LYS A 70 REMARK 465 GLU A 71 REMARK 465 GLU A 72 REMARK 465 ASP A 73 REMARK 465 ILE A 74 REMARK 465 SER A 107 REMARK 465 ARG A 108 REMARK 465 GLY A 109 REMARK 465 SER A 110 REMARK 465 ASP A 111 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 GLY B 121 REMARK 465 ASN B 122 REMARK 465 LYS B 123 REMARK 465 ASN B 124 REMARK 465 GLN B 125 REMARK 465 PHE B 126 REMARK 465 GLU B 127 REMARK 465 PRO B 128 REMARK 465 SER B 129 REMARK 465 ILE B 130 REMARK 465 SER B 131 REMARK 465 ARG B 132 REMARK 465 SER B 133 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 ASP C -1 REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 SER C 3 REMARK 465 GLU C 4 REMARK 465 ASN C 5 REMARK 465 PRO C 6 REMARK 465 SER C 66 REMARK 465 PHE C 67 REMARK 465 GLU C 68 REMARK 465 LEU C 69 REMARK 465 LYS C 70 REMARK 465 GLU C 71 REMARK 465 GLU C 72 REMARK 465 SER C 107 REMARK 465 ARG C 108 REMARK 465 GLY C 109 REMARK 465 SER C 110 REMARK 465 ASP C 111 REMARK 465 MET D 1 REMARK 465 GLU D 2 REMARK 465 ASP D 3 REMARK 465 ILE D 4 REMARK 465 LYS D 103 REMARK 465 SER D 104 REMARK 465 GLN D 105 REMARK 465 ALA D 106 REMARK 465 GLU D 107 REMARK 465 GLN D 108 REMARK 465 GLU D 109 REMARK 465 LYS D 110 REMARK 465 ALA D 111 REMARK 465 LYS D 112 REMARK 465 ASN D 113 REMARK 465 ILE D 114 REMARK 465 ILE D 115 REMARK 465 SER D 116 REMARK 465 ASN D 117 REMARK 465 VAL D 118 REMARK 465 LEU D 119 REMARK 465 ASP D 120 REMARK 465 GLY D 121 REMARK 465 ASN D 122 REMARK 465 LYS D 123 REMARK 465 ASN D 124 REMARK 465 GLN D 125 REMARK 465 PHE D 126 REMARK 465 GLU D 127 REMARK 465 PRO D 128 REMARK 465 SER D 129 REMARK 465 ILE D 130 REMARK 465 SER D 131 REMARK 465 ARG D 132 REMARK 465 SER D 133 REMARK 465 GLY E -3 REMARK 465 PRO E -2 REMARK 465 ASP E -1 REMARK 465 SER E 0 REMARK 465 MET E 1 REMARK 465 THR E 2 REMARK 465 SER E 3 REMARK 465 GLU E 4 REMARK 465 ASP E 27 REMARK 465 VAL E 28 REMARK 465 ASP E 29 REMARK 465 PHE E 30 REMARK 465 TYR E 31 REMARK 465 LYS E 32 REMARK 465 ASN E 33 REMARK 465 LEU E 34 REMARK 465 ASP E 35 REMARK 465 ARG E 36 REMARK 465 GLY E 37 REMARK 465 PHE E 38 REMARK 465 SER E 39 REMARK 465 LYS E 40 REMARK 465 ASP E 41 REMARK 465 GLU E 62 REMARK 465 HIS E 63 REMARK 465 HIS E 64 REMARK 465 GLU E 65 REMARK 465 SER E 66 REMARK 465 PHE E 67 REMARK 465 GLU E 68 REMARK 465 LEU E 69 REMARK 465 LYS E 70 REMARK 465 GLU E 71 REMARK 465 GLU E 72 REMARK 465 ASP E 73 REMARK 465 ILE E 74 REMARK 465 SER E 75 REMARK 465 ASP E 76 REMARK 465 LEU E 77 REMARK 465 LYS E 106 REMARK 465 SER E 107 REMARK 465 ARG E 108 REMARK 465 GLY E 109 REMARK 465 SER E 110 REMARK 465 ASP E 111 REMARK 465 MET F 1 REMARK 465 GLU F 2 REMARK 465 ASP F 3 REMARK 465 ILE F 4 REMARK 465 GLU F 5 REMARK 465 LYS F 6 REMARK 465 ILE F 7 REMARK 465 LYS F 8 REMARK 465 PRO F 9 REMARK 465 LYS F 103 REMARK 465 SER F 104 REMARK 465 GLN F 105 REMARK 465 ALA F 106 REMARK 465 GLU F 107 REMARK 465 GLN F 108 REMARK 465 GLU F 109 REMARK 465 LYS F 110 REMARK 465 ALA F 111 REMARK 465 LYS F 112 REMARK 465 ASN F 113 REMARK 465 ILE F 114 REMARK 465 ILE F 115 REMARK 465 SER F 116 REMARK 465 ASN F 117 REMARK 465 VAL F 118 REMARK 465 LEU F 119 REMARK 465 ASP F 120 REMARK 465 GLY F 121 REMARK 465 ASN F 122 REMARK 465 LYS F 123 REMARK 465 ASN F 124 REMARK 465 GLN F 125 REMARK 465 PHE F 126 REMARK 465 GLU F 127 REMARK 465 PRO F 128 REMARK 465 SER F 129 REMARK 465 ILE F 130 REMARK 465 SER F 131 REMARK 465 ARG F 132 REMARK 465 SER F 133 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 HIS A 64 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 3 CG OD1 OD2 REMARK 470 ILE B 4 CG1 CG2 CD1 REMARK 470 GLU B 5 CG CD OE1 OE2 REMARK 470 LYS B 8 CG CD CE NZ REMARK 470 VAL B 118 CG1 CG2 REMARK 470 LEU B 119 CG CD1 CD2 REMARK 470 ASP B 120 CG OD1 OD2 REMARK 470 HIS C 64 CG ND1 CD2 CE1 NE2 REMARK 470 LYS D 71 CG CD CE NZ REMARK 470 GLU D 102 CG CD OE1 OE2 REMARK 470 ASP E 7 CG OD1 OD2 REMARK 470 VAL E 8 CG1 CG2 REMARK 470 ARG E 12 CG CD NE CZ NH1 NH2 REMARK 470 VAL E 13 CG1 CG2 REMARK 470 SER E 21 OG REMARK 470 SER E 22 OG REMARK 470 LEU E 23 CG CD1 CD2 REMARK 470 GLN E 26 CG CD OE1 NE2 REMARK 470 LEU E 42 CG CD1 CD2 REMARK 470 LYS E 43 CG CD CE NZ REMARK 470 LYS E 45 CG CD CE NZ REMARK 470 LYS E 48 CG CD CE NZ REMARK 470 LEU E 49 CG CD1 CD2 REMARK 470 ASP E 51 CG OD1 OD2 REMARK 470 ILE E 57 CG1 CG2 CD1 REMARK 470 TRP E 78 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP E 78 CZ3 CH2 REMARK 470 ASN E 80 CG OD1 ND2 REMARK 470 ILE E 84 CG1 CG2 CD1 REMARK 470 ASN E 87 CG OD1 ND2 REMARK 470 HIS E 94 CG ND1 CD2 CE1 NE2 REMARK 470 ILE E 103 CG1 CG2 CD1 REMARK 470 TYR F 10 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG F 12 CG CD NE CZ NH1 NH2 REMARK 470 PHE F 14 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS F 16 CG CD CE NZ REMARK 470 LEU F 18 CG CD1 CD2 REMARK 470 GLU F 20 CG CD OE1 OE2 REMARK 470 LEU F 21 CG CD1 CD2 REMARK 470 LYS F 22 CG CD CE NZ REMARK 470 LYS F 31 CG CD CE NZ REMARK 470 GLU F 35 CG CD OE1 OE2 REMARK 470 SER F 41 OG REMARK 470 LYS F 66 CG CD CE NZ REMARK 470 VAL F 67 CG1 CG2 REMARK 470 LYS F 71 CG CD CE NZ REMARK 470 SER F 74 OG REMARK 470 ILE F 76 CG1 CG2 CD1 REMARK 470 LEU F 77 CG CD1 CD2 REMARK 470 SER F 85 OG REMARK 470 LYS F 89 CG CD CE NZ REMARK 470 LYS F 91 CG CD CE NZ REMARK 470 ARG F 96 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 99 CG CD CE NZ REMARK 470 SER F 100 OG REMARK 470 GLU F 102 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER B 13 O HOH B 301 2.15 REMARK 500 OD1 ASP D 72 O HOH D 301 2.17 REMARK 500 O HOH B 384 O HOH B 429 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 345 O HOH D 316 8555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 64 66.18 -152.64 REMARK 500 HIS C 64 65.17 -150.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 433 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH C 403 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH F 213 DISTANCE = 7.46 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 D 201 DBREF 4WFC A 1 111 UNP Q12149 RRP6_YEAST 1 111 DBREF 4WFC B 1 133 UNP P38801 LRP1_YEAST 1 133 DBREF 4WFC C 1 111 UNP Q12149 RRP6_YEAST 1 111 DBREF 4WFC D 1 133 UNP P38801 LRP1_YEAST 1 133 DBREF 4WFC E 1 111 UNP Q12149 RRP6_YEAST 1 111 DBREF 4WFC F 1 133 UNP P38801 LRP1_YEAST 1 133 SEQADV 4WFC GLY A -3 UNP Q12149 EXPRESSION TAG SEQADV 4WFC PRO A -2 UNP Q12149 EXPRESSION TAG SEQADV 4WFC ASP A -1 UNP Q12149 EXPRESSION TAG SEQADV 4WFC SER A 0 UNP Q12149 EXPRESSION TAG SEQADV 4WFC GLY C -3 UNP Q12149 EXPRESSION TAG SEQADV 4WFC PRO C -2 UNP Q12149 EXPRESSION TAG SEQADV 4WFC ASP C -1 UNP Q12149 EXPRESSION TAG SEQADV 4WFC SER C 0 UNP Q12149 EXPRESSION TAG SEQADV 4WFC GLY E -3 UNP Q12149 EXPRESSION TAG SEQADV 4WFC PRO E -2 UNP Q12149 EXPRESSION TAG SEQADV 4WFC ASP E -1 UNP Q12149 EXPRESSION TAG SEQADV 4WFC SER E 0 UNP Q12149 EXPRESSION TAG SEQRES 1 A 115 GLY PRO ASP SER MET THR SER GLU ASN PRO ASP VAL LEU SEQRES 2 A 115 LEU SER ARG VAL ILE ASN VAL VAL ARG ALA ALA SER SER SEQRES 3 A 115 LEU ALA SER GLN ASP VAL ASP PHE TYR LYS ASN LEU ASP SEQRES 4 A 115 ARG GLY PHE SER LYS ASP LEU LYS SER LYS ALA ASP LYS SEQRES 5 A 115 LEU ALA ASP MET ALA ASN GLU ILE ILE LEU SER ILE ASP SEQRES 6 A 115 GLU HIS HIS GLU SER PHE GLU LEU LYS GLU GLU ASP ILE SEQRES 7 A 115 SER ASP LEU TRP ASN ASN PHE GLY ASN ILE MET ASP ASN SEQRES 8 A 115 LEU LEU GLU MET SER ASP HIS SER LEU ASP LYS LEU ASN SEQRES 9 A 115 CYS ALA ILE ASN SER LYS SER ARG GLY SER ASP SEQRES 1 B 133 MET GLU ASP ILE GLU LYS ILE LYS PRO TYR VAL ARG SER SEQRES 2 B 133 PHE SER LYS ALA LEU ASP GLU LEU LYS PRO GLU ILE GLU SEQRES 3 B 133 LYS LEU THR SER LYS SER LEU ASP GLU GLN LEU LEU LEU SEQRES 4 B 133 LEU SER ASP GLU ARG ALA LYS LEU GLU LEU ILE ASN ARG SEQRES 5 B 133 TYR ALA TYR VAL LEU SER SER LEU MET PHE ALA ASN MET SEQRES 6 B 133 LYS VAL LEU GLY VAL LYS ASP MET SER PRO ILE LEU GLY SEQRES 7 B 133 GLU LEU LYS ARG VAL LYS SER TYR MET ASP LYS ALA LYS SEQRES 8 B 133 GLN TYR ASP ASN ARG ILE THR LYS SER ASN GLU LYS SER SEQRES 9 B 133 GLN ALA GLU GLN GLU LYS ALA LYS ASN ILE ILE SER ASN SEQRES 10 B 133 VAL LEU ASP GLY ASN LYS ASN GLN PHE GLU PRO SER ILE SEQRES 11 B 133 SER ARG SER SEQRES 1 C 115 GLY PRO ASP SER MET THR SER GLU ASN PRO ASP VAL LEU SEQRES 2 C 115 LEU SER ARG VAL ILE ASN VAL VAL ARG ALA ALA SER SER SEQRES 3 C 115 LEU ALA SER GLN ASP VAL ASP PHE TYR LYS ASN LEU ASP SEQRES 4 C 115 ARG GLY PHE SER LYS ASP LEU LYS SER LYS ALA ASP LYS SEQRES 5 C 115 LEU ALA ASP MET ALA ASN GLU ILE ILE LEU SER ILE ASP SEQRES 6 C 115 GLU HIS HIS GLU SER PHE GLU LEU LYS GLU GLU ASP ILE SEQRES 7 C 115 SER ASP LEU TRP ASN ASN PHE GLY ASN ILE MET ASP ASN SEQRES 8 C 115 LEU LEU GLU MET SER ASP HIS SER LEU ASP LYS LEU ASN SEQRES 9 C 115 CYS ALA ILE ASN SER LYS SER ARG GLY SER ASP SEQRES 1 D 133 MET GLU ASP ILE GLU LYS ILE LYS PRO TYR VAL ARG SER SEQRES 2 D 133 PHE SER LYS ALA LEU ASP GLU LEU LYS PRO GLU ILE GLU SEQRES 3 D 133 LYS LEU THR SER LYS SER LEU ASP GLU GLN LEU LEU LEU SEQRES 4 D 133 LEU SER ASP GLU ARG ALA LYS LEU GLU LEU ILE ASN ARG SEQRES 5 D 133 TYR ALA TYR VAL LEU SER SER LEU MET PHE ALA ASN MET SEQRES 6 D 133 LYS VAL LEU GLY VAL LYS ASP MET SER PRO ILE LEU GLY SEQRES 7 D 133 GLU LEU LYS ARG VAL LYS SER TYR MET ASP LYS ALA LYS SEQRES 8 D 133 GLN TYR ASP ASN ARG ILE THR LYS SER ASN GLU LYS SER SEQRES 9 D 133 GLN ALA GLU GLN GLU LYS ALA LYS ASN ILE ILE SER ASN SEQRES 10 D 133 VAL LEU ASP GLY ASN LYS ASN GLN PHE GLU PRO SER ILE SEQRES 11 D 133 SER ARG SER SEQRES 1 E 115 GLY PRO ASP SER MET THR SER GLU ASN PRO ASP VAL LEU SEQRES 2 E 115 LEU SER ARG VAL ILE ASN VAL VAL ARG ALA ALA SER SER SEQRES 3 E 115 LEU ALA SER GLN ASP VAL ASP PHE TYR LYS ASN LEU ASP SEQRES 4 E 115 ARG GLY PHE SER LYS ASP LEU LYS SER LYS ALA ASP LYS SEQRES 5 E 115 LEU ALA ASP MET ALA ASN GLU ILE ILE LEU SER ILE ASP SEQRES 6 E 115 GLU HIS HIS GLU SER PHE GLU LEU LYS GLU GLU ASP ILE SEQRES 7 E 115 SER ASP LEU TRP ASN ASN PHE GLY ASN ILE MET ASP ASN SEQRES 8 E 115 LEU LEU GLU MET SER ASP HIS SER LEU ASP LYS LEU ASN SEQRES 9 E 115 CYS ALA ILE ASN SER LYS SER ARG GLY SER ASP SEQRES 1 F 133 MET GLU ASP ILE GLU LYS ILE LYS PRO TYR VAL ARG SER SEQRES 2 F 133 PHE SER LYS ALA LEU ASP GLU LEU LYS PRO GLU ILE GLU SEQRES 3 F 133 LYS LEU THR SER LYS SER LEU ASP GLU GLN LEU LEU LEU SEQRES 4 F 133 LEU SER ASP GLU ARG ALA LYS LEU GLU LEU ILE ASN ARG SEQRES 5 F 133 TYR ALA TYR VAL LEU SER SER LEU MET PHE ALA ASN MET SEQRES 6 F 133 LYS VAL LEU GLY VAL LYS ASP MET SER PRO ILE LEU GLY SEQRES 7 F 133 GLU LEU LYS ARG VAL LYS SER TYR MET ASP LYS ALA LYS SEQRES 8 F 133 GLN TYR ASP ASN ARG ILE THR LYS SER ASN GLU LYS SER SEQRES 9 F 133 GLN ALA GLU GLN GLU LYS ALA LYS ASN ILE ILE SER ASN SEQRES 10 F 133 VAL LEU ASP GLY ASN LYS ASN GLN PHE GLU PRO SER ILE SEQRES 11 F 133 SER ARG SER HET SO4 A 201 5 HET SO4 B 201 5 HET SO4 C 201 5 HET SO4 D 201 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 4(O4 S 2-) FORMUL 11 HOH *463(H2 O) HELIX 1 AA1 ASP A 7 GLN A 26 1 20 HELIX 2 AA2 ASP A 27 ASP A 35 1 9 HELIX 3 AA3 ASP A 35 ASP A 61 1 27 HELIX 4 AA4 ASP A 76 LYS A 106 1 31 HELIX 5 AA5 ASP B 3 LYS B 6 5 4 HELIX 6 AA6 ILE B 7 THR B 29 1 23 HELIX 7 AA7 SER B 32 LEU B 40 1 9 HELIX 8 AA8 ASP B 42 LEU B 68 1 27 HELIX 9 AA9 MET B 73 ASP B 120 1 48 HELIX 10 AB1 VAL C 8 GLN C 26 1 19 HELIX 11 AB2 ASP C 27 ASP C 35 1 9 HELIX 12 AB3 ASP C 35 ASP C 61 1 27 HELIX 13 AB4 ILE C 74 LYS C 106 1 33 HELIX 14 AB5 ILE D 7 THR D 29 1 23 HELIX 15 AB6 SER D 32 LEU D 40 1 9 HELIX 16 AB7 ASP D 42 LEU D 68 1 27 HELIX 17 AB8 MET D 73 GLU D 102 1 30 HELIX 18 AB9 PRO E 6 GLN E 26 1 21 HELIX 19 AC1 LYS E 43 ASP E 61 1 19 HELIX 20 AC2 ASN E 79 SER E 105 1 27 HELIX 21 AC3 VAL F 11 THR F 29 1 19 HELIX 22 AC4 SER F 32 LEU F 40 1 9 HELIX 23 AC5 ASP F 42 GLY F 69 1 28 HELIX 24 AC6 MET F 73 GLU F 102 1 30 SSBOND 1 CYS E 101 CYS E 101 1555 8665 2.04 SITE 1 AC1 4 SER A 3 GLU A 4 ARG A 18 SER D 41 SITE 1 AC2 3 ARG B 96 LYS B 99 HOH B 320 SITE 1 AC3 3 SER B 41 ILE C 14 ARG C 18 SITE 1 AC4 4 ILE C 103 ARG D 96 LYS D 99 SER D 100 CRYST1 98.397 98.397 208.018 90.00 90.00 90.00 P 41 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004807 0.00000