data_4WFS # _entry.id 4WFS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4WFS WWPDB D_1000203744 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4WFS _pdbx_database_status.recvd_initial_deposition_date 2014-09-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bou Nader, C.' 1 'Pecqueur, L.' 2 'Kamah, A.' 3 'Bregeon, D.' 4 'Golinelli-Pimpaneau, B.' 5 'Guimaraes, B.G.' 6 'Fontecave, M.' 7 'Hamdane, D.' 8 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 9446 _citation.page_last 9456 _citation.title 'An extended dsRBD is required for post-transcriptional modification in human tRNAs.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv989 _citation.pdbx_database_id_PubMed 26429968 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Bou-Nader, C.' 1 primary 'Pecqueur, L.' 2 primary 'Bregeon, D.' 3 primary 'Kamah, A.' 4 primary 'Guerineau, V.' 5 primary 'Golinelli-Pimpaneau, B.' 6 primary 'Guimaraes, B.G.' 7 primary 'Fontecave, M.' 8 primary 'Hamdane, D.' 9 # _cell.entry_id 4WFS _cell.length_a 71.570 _cell.length_b 85.260 _cell.length_c 144.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'tRNA-dihydrouridine(20) synthase [NAD(P)+]-like' 36805.359 1 1.3.1.- ? 'DUS domain, UNP residues 14-333' ? 2 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dihydrouridine synthase 2,Up-regulated in lung cancer protein 8,URLC8,tRNA-dihydrouridine synthase 2-like,hDUS2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVF QMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTL SLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAM WNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQE LDAQQAR ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVF QMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTL SLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAM WNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQE LDAQQAR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 LEU n 1 9 ILE n 1 10 LEU n 1 11 ALA n 1 12 PRO n 1 13 MET n 1 14 VAL n 1 15 ARG n 1 16 VAL n 1 17 GLY n 1 18 THR n 1 19 LEU n 1 20 PRO n 1 21 MET n 1 22 ARG n 1 23 LEU n 1 24 LEU n 1 25 ALA n 1 26 LEU n 1 27 ASP n 1 28 TYR n 1 29 GLY n 1 30 ALA n 1 31 ASP n 1 32 ILE n 1 33 VAL n 1 34 TYR n 1 35 CYS n 1 36 GLU n 1 37 GLU n 1 38 LEU n 1 39 ILE n 1 40 ASP n 1 41 LEU n 1 42 LYS n 1 43 MET n 1 44 ILE n 1 45 GLN n 1 46 CYS n 1 47 LYS n 1 48 ARG n 1 49 VAL n 1 50 VAL n 1 51 ASN n 1 52 GLU n 1 53 VAL n 1 54 LEU n 1 55 SER n 1 56 THR n 1 57 VAL n 1 58 ASP n 1 59 PHE n 1 60 VAL n 1 61 ALA n 1 62 PRO n 1 63 ASP n 1 64 ASP n 1 65 ARG n 1 66 VAL n 1 67 VAL n 1 68 PHE n 1 69 ARG n 1 70 THR n 1 71 CYS n 1 72 GLU n 1 73 ARG n 1 74 GLU n 1 75 GLN n 1 76 ASN n 1 77 ARG n 1 78 VAL n 1 79 VAL n 1 80 PHE n 1 81 GLN n 1 82 MET n 1 83 GLY n 1 84 THR n 1 85 SER n 1 86 ASP n 1 87 ALA n 1 88 GLU n 1 89 ARG n 1 90 ALA n 1 91 LEU n 1 92 ALA n 1 93 VAL n 1 94 ALA n 1 95 ARG n 1 96 LEU n 1 97 VAL n 1 98 GLU n 1 99 ASN n 1 100 ASP n 1 101 VAL n 1 102 ALA n 1 103 GLY n 1 104 ILE n 1 105 ASP n 1 106 VAL n 1 107 ASN n 1 108 MET n 1 109 GLY n 1 110 CYS n 1 111 PRO n 1 112 LYS n 1 113 GLN n 1 114 TYR n 1 115 SER n 1 116 THR n 1 117 LYS n 1 118 GLY n 1 119 GLY n 1 120 MET n 1 121 GLY n 1 122 ALA n 1 123 ALA n 1 124 LEU n 1 125 LEU n 1 126 SER n 1 127 ASP n 1 128 PRO n 1 129 ASP n 1 130 LYS n 1 131 ILE n 1 132 GLU n 1 133 LYS n 1 134 ILE n 1 135 LEU n 1 136 SER n 1 137 THR n 1 138 LEU n 1 139 VAL n 1 140 LYS n 1 141 GLY n 1 142 THR n 1 143 ARG n 1 144 ARG n 1 145 PRO n 1 146 VAL n 1 147 THR n 1 148 CYS n 1 149 LYS n 1 150 ILE n 1 151 ARG n 1 152 ILE n 1 153 LEU n 1 154 PRO n 1 155 SER n 1 156 LEU n 1 157 GLU n 1 158 ASP n 1 159 THR n 1 160 LEU n 1 161 SER n 1 162 LEU n 1 163 VAL n 1 164 LYS n 1 165 ARG n 1 166 ILE n 1 167 GLU n 1 168 ARG n 1 169 THR n 1 170 GLY n 1 171 ILE n 1 172 ALA n 1 173 ALA n 1 174 ILE n 1 175 ALA n 1 176 VAL n 1 177 HIS n 1 178 GLY n 1 179 ARG n 1 180 LYS n 1 181 ARG n 1 182 GLU n 1 183 GLU n 1 184 ARG n 1 185 PRO n 1 186 GLN n 1 187 HIS n 1 188 PRO n 1 189 VAL n 1 190 SER n 1 191 CYS n 1 192 GLU n 1 193 VAL n 1 194 ILE n 1 195 LYS n 1 196 ALA n 1 197 ILE n 1 198 ALA n 1 199 ASP n 1 200 THR n 1 201 LEU n 1 202 SER n 1 203 ILE n 1 204 PRO n 1 205 VAL n 1 206 ILE n 1 207 ALA n 1 208 ASN n 1 209 GLY n 1 210 GLY n 1 211 SER n 1 212 HIS n 1 213 ASP n 1 214 HIS n 1 215 ILE n 1 216 GLN n 1 217 GLN n 1 218 TYR n 1 219 SER n 1 220 ASP n 1 221 ILE n 1 222 GLU n 1 223 ASP n 1 224 PHE n 1 225 ARG n 1 226 GLN n 1 227 ALA n 1 228 THR n 1 229 ALA n 1 230 ALA n 1 231 SER n 1 232 SER n 1 233 VAL n 1 234 MET n 1 235 VAL n 1 236 ALA n 1 237 ARG n 1 238 ALA n 1 239 ALA n 1 240 MET n 1 241 TRP n 1 242 ASN n 1 243 PRO n 1 244 SER n 1 245 ILE n 1 246 PHE n 1 247 LEU n 1 248 LYS n 1 249 GLU n 1 250 GLY n 1 251 LEU n 1 252 ARG n 1 253 PRO n 1 254 LEU n 1 255 GLU n 1 256 GLU n 1 257 VAL n 1 258 MET n 1 259 GLN n 1 260 LYS n 1 261 TYR n 1 262 ILE n 1 263 ARG n 1 264 TYR n 1 265 ALA n 1 266 VAL n 1 267 GLN n 1 268 TYR n 1 269 ASP n 1 270 ASN n 1 271 HIS n 1 272 TYR n 1 273 THR n 1 274 ASN n 1 275 THR n 1 276 LYS n 1 277 TYR n 1 278 CYS n 1 279 LEU n 1 280 CYS n 1 281 GLN n 1 282 MET n 1 283 LEU n 1 284 ARG n 1 285 GLU n 1 286 GLN n 1 287 LEU n 1 288 GLU n 1 289 SER n 1 290 PRO n 1 291 GLN n 1 292 GLY n 1 293 ARG n 1 294 LEU n 1 295 LEU n 1 296 HIS n 1 297 ALA n 1 298 ALA n 1 299 GLN n 1 300 SER n 1 301 SER n 1 302 ARG n 1 303 GLU n 1 304 ILE n 1 305 CYS n 1 306 GLU n 1 307 ALA n 1 308 PHE n 1 309 GLY n 1 310 LEU n 1 311 GLY n 1 312 ALA n 1 313 PHE n 1 314 TYR n 1 315 GLU n 1 316 GLU n 1 317 THR n 1 318 THR n 1 319 GLN n 1 320 GLU n 1 321 LEU n 1 322 ASP n 1 323 ALA n 1 324 GLN n 1 325 GLN n 1 326 ALA n 1 327 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 8 _entity_src_gen.pdbx_end_seq_num 327 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DUS2, DUS2L' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'STAR codon plus' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11d _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DUS2L_HUMAN _struct_ref.pdbx_db_accession Q9NX74 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSDA ERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIE RTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFL KEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGAFYEETTQELDAQQAR ; _struct_ref.pdbx_align_begin 14 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4WFS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 327 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NX74 _struct_ref_seq.db_align_beg 14 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 333 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 14 _struct_ref_seq.pdbx_auth_seq_align_end 333 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4WFS MET A 1 ? UNP Q9NX74 ? ? 'expression tag' 7 1 1 4WFS HIS A 2 ? UNP Q9NX74 ? ? 'expression tag' 8 2 1 4WFS HIS A 3 ? UNP Q9NX74 ? ? 'expression tag' 9 3 1 4WFS HIS A 4 ? UNP Q9NX74 ? ? 'expression tag' 10 4 1 4WFS HIS A 5 ? UNP Q9NX74 ? ? 'expression tag' 11 5 1 4WFS HIS A 6 ? UNP Q9NX74 ? ? 'expression tag' 12 6 1 4WFS HIS A 7 ? UNP Q9NX74 ? ? 'expression tag' 13 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4WFS _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.06 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 292 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Protein 8 mg/mL in Tris 25 mM pH 8.0 NaCl 150 mM Precipitant: Ammonium sulfate 2.2 M, isopropanol 2% v/v ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-11-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator CRYSTAL _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9801 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9801 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate 54.90 _reflns.entry_id 4WFS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.68 _reflns.d_resolution_low 43.64 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12686 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.09 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.87 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.d_res_high 2.68 _reflns_shell.d_res_low 2.77 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs 2.69 _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy 7.12 _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all 91.76 _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] -1.2361 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 6.3304 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -5.0943 _refine.B_iso_max ? _refine.B_iso_mean 53.90 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.9380 _refine.correlation_coeff_Fo_to_Fc_free 0.9227 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4WFS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.68 _refine.ls_d_res_low 43.64 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12684 _refine.ls_number_reflns_R_free 635 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.44 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1985 _refine.ls_R_factor_R_free 0.2217 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1973 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3B0P _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.260 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.258 _refine.pdbx_overall_SU_R_Blow_DPI 0.494 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.484 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.entry_id 4WFS _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.337 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2334 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 52 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 2414 _refine_hist.d_res_high 2.68 _refine_hist.d_res_low 43.64 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2452 ? t_bond_d 2.00 HARMONIC 'X-RAY DIFFRACTION' ? 1.07 ? 3341 ? t_angle_deg 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1138 ? t_dihedral_angle_d 2.00 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 54 ? t_trig_c_planes 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 403 ? t_gen_planes 5.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 2452 ? t_it 20.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? 5.55 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 2.84 ? ? ? t_other_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 335 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 1 ? t_sum_occupancies 1.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 3009 ? t_ideal_dist_contact 4.00 SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.68 _refine_ls_shell.d_res_low 2.94 _refine_ls_shell.number_reflns_all 2941 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 147 _refine_ls_shell.number_reflns_R_work 2794 _refine_ls_shell.percent_reflns_obs 99.44 _refine_ls_shell.percent_reflns_R_free 5.00 _refine_ls_shell.R_factor_all 0.2509 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3103 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2479 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.pdbx_phase_error ? # _struct.entry_id 4WFS _struct.title 'Crystal Structure of tRNA-dihydrouridine(20) synthase catalytic domain' _struct.pdbx_descriptor 'DUS domain of tRNA-dihydrouridine(20) synthase (E.C.1.3.1.91)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4WFS _struct_keywords.text 'RNA BINDING PROTEIN, tRNA PROCESSING, FLAVOPROTEIN, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 18 ? GLY A 29 ? THR A 24 GLY A 35 1 ? 12 HELX_P HELX_P2 AA2 ASP A 40 ? ILE A 44 ? ASP A 46 ILE A 50 1 ? 5 HELX_P HELX_P3 AA3 CYS A 71 ? GLN A 75 ? CYS A 77 GLN A 81 5 ? 5 HELX_P HELX_P4 AA4 ASP A 86 ? GLU A 98 ? ASP A 92 GLU A 104 1 ? 13 HELX_P HELX_P5 AA5 ALA A 123 ? SER A 126 ? ALA A 129 SER A 132 5 ? 4 HELX_P HELX_P6 AA6 ASP A 127 ? THR A 142 ? ASP A 133 THR A 148 1 ? 16 HELX_P HELX_P7 AA7 SER A 155 ? THR A 169 ? SER A 161 THR A 175 1 ? 15 HELX_P HELX_P8 AA8 SER A 190 ? LEU A 201 ? SER A 196 LEU A 207 1 ? 12 HELX_P HELX_P9 AA9 SER A 219 ? THR A 228 ? SER A 225 THR A 234 1 ? 10 HELX_P HELX_P10 AB1 ALA A 236 ? ASN A 242 ? ALA A 242 ASN A 248 1 ? 7 HELX_P HELX_P11 AB2 PRO A 243 ? LEU A 247 ? PRO A 249 LEU A 253 5 ? 5 HELX_P HELX_P12 AB3 PRO A 253 ? TYR A 268 ? PRO A 259 TYR A 274 1 ? 16 HELX_P HELX_P13 AB4 HIS A 271 ? ARG A 284 ? HIS A 277 ARG A 290 1 ? 14 HELX_P HELX_P14 AB5 GLU A 285 ? GLU A 288 ? GLU A 291 GLU A 294 5 ? 4 HELX_P HELX_P15 AB6 SER A 289 ? ALA A 298 ? SER A 295 ALA A 304 1 ? 10 HELX_P HELX_P16 AB7 SER A 300 ? ALA A 307 ? SER A 306 ALA A 313 1 ? 8 HELX_P HELX_P17 AB8 LEU A 310 ? ALA A 323 ? LEU A 316 ALA A 329 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 10 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA1 8 9 ? parallel AA1 9 10 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 38 ? ILE A 39 ? LEU A 44 ILE A 45 AA1 2 VAL A 78 ? GLY A 83 ? VAL A 84 GLY A 89 AA1 3 GLY A 103 ? MET A 108 ? GLY A 109 MET A 114 AA1 4 VAL A 146 ? ILE A 152 ? VAL A 152 ILE A 158 AA1 5 ILE A 174 ? LYS A 180 ? ILE A 180 LYS A 186 AA1 6 VAL A 205 ? ASN A 208 ? VAL A 211 ASN A 214 AA1 7 SER A 232 ? VAL A 235 ? SER A 238 VAL A 241 AA1 8 LEU A 8 ? LEU A 10 ? LEU A 14 LEU A 16 AA1 9 ILE A 32 ? TYR A 34 ? ILE A 38 TYR A 40 AA1 10 VAL A 78 ? GLY A 83 ? VAL A 84 GLY A 89 AA2 1 LYS A 47 ? ASN A 51 ? LYS A 53 ASN A 57 AA2 2 THR A 56 ? VAL A 60 ? THR A 62 VAL A 66 AA2 3 VAL A 66 ? THR A 70 ? VAL A 72 THR A 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 38 ? N LEU A 44 O GLY A 83 ? O GLY A 89 AA1 2 3 N PHE A 80 ? N PHE A 86 O ASP A 105 ? O ASP A 111 AA1 3 4 N ILE A 104 ? N ILE A 110 O THR A 147 ? O THR A 153 AA1 4 5 N ILE A 150 ? N ILE A 156 O HIS A 177 ? O HIS A 183 AA1 5 6 N ILE A 174 ? N ILE A 180 O ILE A 206 ? O ILE A 212 AA1 6 7 N ALA A 207 ? N ALA A 213 O MET A 234 ? O MET A 240 AA1 7 8 O VAL A 235 ? O VAL A 241 N ILE A 9 ? N ILE A 15 AA1 8 9 N LEU A 10 ? N LEU A 16 O ILE A 32 ? O ILE A 38 AA1 9 10 N VAL A 33 ? N VAL A 39 O VAL A 79 ? O VAL A 85 AA2 1 2 N LYS A 47 ? N LYS A 53 O VAL A 60 ? O VAL A 66 AA2 2 3 N VAL A 57 ? N VAL A 63 O THR A 70 ? O THR A 76 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMN 401 ? 19 'binding site for residue FMN A 401' AC2 Software A SO4 402 ? 6 'binding site for residue SO4 A 402' AC3 Software A SO4 403 ? 5 'binding site for residue SO4 A 403' AC4 Software A SO4 404 ? 4 'binding site for residue SO4 A 404' AC5 Software A SO4 405 ? 3 'binding site for residue SO4 A 405' AC6 Software A CL 406 ? 1 'binding site for residue CL A 406' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 19 ALA A 11 ? ALA A 17 . ? 1_555 ? 2 AC1 19 PRO A 12 ? PRO A 18 . ? 1_555 ? 3 AC1 19 MET A 13 ? MET A 19 . ? 1_555 ? 4 AC1 19 VAL A 14 ? VAL A 20 . ? 1_555 ? 5 AC1 19 GLU A 37 ? GLU A 43 . ? 1_555 ? 6 AC1 19 GLN A 81 ? GLN A 87 . ? 1_555 ? 7 AC1 19 ASN A 107 ? ASN A 113 . ? 1_555 ? 8 AC1 19 LYS A 149 ? LYS A 155 . ? 1_555 ? 9 AC1 19 HIS A 177 ? HIS A 183 . ? 1_555 ? 10 AC1 19 ASN A 208 ? ASN A 214 . ? 1_555 ? 11 AC1 19 GLY A 209 ? GLY A 215 . ? 1_555 ? 12 AC1 19 GLY A 210 ? GLY A 216 . ? 1_555 ? 13 AC1 19 SER A 211 ? SER A 217 . ? 1_555 ? 14 AC1 19 MET A 234 ? MET A 240 . ? 1_555 ? 15 AC1 19 ALA A 236 ? ALA A 242 . ? 1_555 ? 16 AC1 19 ARG A 237 ? ARG A 243 . ? 1_555 ? 17 AC1 19 SO4 D . ? SO4 A 403 . ? 1_555 ? 18 AC1 19 HOH H . ? HOH A 502 . ? 1_555 ? 19 AC1 19 HOH H . ? HOH A 524 . ? 1_555 ? 20 AC2 6 SER A 85 ? SER A 91 . ? 7_454 ? 21 AC2 6 ARG A 89 ? ARG A 95 . ? 7_454 ? 22 AC2 6 GLY A 309 ? GLY A 315 . ? 1_555 ? 23 AC2 6 LEU A 310 ? LEU A 316 . ? 1_555 ? 24 AC2 6 GLY A 311 ? GLY A 317 . ? 1_555 ? 25 AC2 6 ALA A 312 ? ALA A 318 . ? 1_555 ? 26 AC3 5 GLY A 109 ? GLY A 115 . ? 1_555 ? 27 AC3 5 LYS A 149 ? LYS A 155 . ? 1_555 ? 28 AC3 5 ARG A 151 ? ARG A 157 . ? 1_555 ? 29 AC3 5 HIS A 177 ? HIS A 183 . ? 1_555 ? 30 AC3 5 FMN B . ? FMN A 401 . ? 1_555 ? 31 AC4 4 ARG A 15 ? ARG A 21 . ? 1_555 ? 32 AC4 4 THR A 273 ? THR A 279 . ? 1_555 ? 33 AC4 4 ASN A 274 ? ASN A 280 . ? 1_555 ? 34 AC4 4 HOH H . ? HOH A 527 . ? 1_555 ? 35 AC5 3 ASN A 76 ? ASN A 82 . ? 1_555 ? 36 AC5 3 ARG A 77 ? ARG A 83 . ? 1_555 ? 37 AC5 3 HOH H . ? HOH A 520 . ? 1_555 ? 38 AC6 1 ARG A 252 ? ARG A 258 . ? 1_555 ? # _atom_sites.entry_id 4WFS _atom_sites.fract_transf_matrix[1][1] 0.013972 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011729 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006933 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 7 ? ? ? A . n A 1 2 HIS 2 8 ? ? ? A . n A 1 3 HIS 3 9 ? ? ? A . n A 1 4 HIS 4 10 ? ? ? A . n A 1 5 HIS 5 11 ? ? ? A . n A 1 6 HIS 6 12 12 HIS HIS A . n A 1 7 HIS 7 13 13 HIS HIS A . n A 1 8 LEU 8 14 14 LEU LEU A . n A 1 9 ILE 9 15 15 ILE ILE A . n A 1 10 LEU 10 16 16 LEU LEU A . n A 1 11 ALA 11 17 17 ALA ALA A . n A 1 12 PRO 12 18 18 PRO PRO A . n A 1 13 MET 13 19 19 MET MET A . n A 1 14 VAL 14 20 20 VAL VAL A . n A 1 15 ARG 15 21 21 ARG ARG A . n A 1 16 VAL 16 22 22 VAL VAL A . n A 1 17 GLY 17 23 23 GLY GLY A . n A 1 18 THR 18 24 24 THR THR A . n A 1 19 LEU 19 25 25 LEU LEU A . n A 1 20 PRO 20 26 26 PRO PRO A . n A 1 21 MET 21 27 27 MET MET A . n A 1 22 ARG 22 28 28 ARG ARG A . n A 1 23 LEU 23 29 29 LEU LEU A . n A 1 24 LEU 24 30 30 LEU LEU A . n A 1 25 ALA 25 31 31 ALA ALA A . n A 1 26 LEU 26 32 32 LEU LEU A . n A 1 27 ASP 27 33 33 ASP ASP A . n A 1 28 TYR 28 34 34 TYR TYR A . n A 1 29 GLY 29 35 35 GLY GLY A . n A 1 30 ALA 30 36 36 ALA ALA A . n A 1 31 ASP 31 37 37 ASP ASP A . n A 1 32 ILE 32 38 38 ILE ILE A . n A 1 33 VAL 33 39 39 VAL VAL A . n A 1 34 TYR 34 40 40 TYR TYR A . n A 1 35 CYS 35 41 41 CYS CYS A . n A 1 36 GLU 36 42 42 GLU GLU A . n A 1 37 GLU 37 43 43 GLU GLU A . n A 1 38 LEU 38 44 44 LEU LEU A . n A 1 39 ILE 39 45 45 ILE ILE A . n A 1 40 ASP 40 46 46 ASP ASP A . n A 1 41 LEU 41 47 47 LEU LEU A . n A 1 42 LYS 42 48 48 LYS LYS A . n A 1 43 MET 43 49 49 MET MET A . n A 1 44 ILE 44 50 50 ILE ILE A . n A 1 45 GLN 45 51 51 GLN GLN A . n A 1 46 CYS 46 52 52 CYS CYS A . n A 1 47 LYS 47 53 53 LYS LYS A . n A 1 48 ARG 48 54 54 ARG ARG A . n A 1 49 VAL 49 55 55 VAL VAL A . n A 1 50 VAL 50 56 56 VAL VAL A . n A 1 51 ASN 51 57 57 ASN ASN A . n A 1 52 GLU 52 58 58 GLU GLU A . n A 1 53 VAL 53 59 59 VAL VAL A . n A 1 54 LEU 54 60 60 LEU LEU A . n A 1 55 SER 55 61 61 SER SER A . n A 1 56 THR 56 62 62 THR THR A . n A 1 57 VAL 57 63 63 VAL VAL A . n A 1 58 ASP 58 64 64 ASP ASP A . n A 1 59 PHE 59 65 65 PHE PHE A . n A 1 60 VAL 60 66 66 VAL VAL A . n A 1 61 ALA 61 67 67 ALA ALA A . n A 1 62 PRO 62 68 68 PRO PRO A . n A 1 63 ASP 63 69 69 ASP ASP A . n A 1 64 ASP 64 70 70 ASP ASP A . n A 1 65 ARG 65 71 71 ARG ARG A . n A 1 66 VAL 66 72 72 VAL VAL A . n A 1 67 VAL 67 73 73 VAL VAL A . n A 1 68 PHE 68 74 74 PHE PHE A . n A 1 69 ARG 69 75 75 ARG ARG A . n A 1 70 THR 70 76 76 THR THR A . n A 1 71 CYS 71 77 77 CYS CYS A . n A 1 72 GLU 72 78 78 GLU GLU A . n A 1 73 ARG 73 79 79 ARG ARG A . n A 1 74 GLU 74 80 80 GLU GLU A . n A 1 75 GLN 75 81 81 GLN GLN A . n A 1 76 ASN 76 82 82 ASN ASN A . n A 1 77 ARG 77 83 83 ARG ARG A . n A 1 78 VAL 78 84 84 VAL VAL A . n A 1 79 VAL 79 85 85 VAL VAL A . n A 1 80 PHE 80 86 86 PHE PHE A . n A 1 81 GLN 81 87 87 GLN GLN A . n A 1 82 MET 82 88 88 MET MET A . n A 1 83 GLY 83 89 89 GLY GLY A . n A 1 84 THR 84 90 90 THR THR A . n A 1 85 SER 85 91 91 SER SER A . n A 1 86 ASP 86 92 92 ASP ASP A . n A 1 87 ALA 87 93 93 ALA ALA A . n A 1 88 GLU 88 94 94 GLU GLU A . n A 1 89 ARG 89 95 95 ARG ARG A . n A 1 90 ALA 90 96 96 ALA ALA A . n A 1 91 LEU 91 97 97 LEU LEU A . n A 1 92 ALA 92 98 98 ALA ALA A . n A 1 93 VAL 93 99 99 VAL VAL A . n A 1 94 ALA 94 100 100 ALA ALA A . n A 1 95 ARG 95 101 101 ARG ARG A . n A 1 96 LEU 96 102 102 LEU LEU A . n A 1 97 VAL 97 103 103 VAL VAL A . n A 1 98 GLU 98 104 104 GLU GLU A . n A 1 99 ASN 99 105 105 ASN ASN A . n A 1 100 ASP 100 106 106 ASP ASP A . n A 1 101 VAL 101 107 107 VAL VAL A . n A 1 102 ALA 102 108 108 ALA ALA A . n A 1 103 GLY 103 109 109 GLY GLY A . n A 1 104 ILE 104 110 110 ILE ILE A . n A 1 105 ASP 105 111 111 ASP ASP A . n A 1 106 VAL 106 112 112 VAL VAL A . n A 1 107 ASN 107 113 113 ASN ASN A . n A 1 108 MET 108 114 114 MET MET A . n A 1 109 GLY 109 115 115 GLY GLY A . n A 1 110 CYS 110 116 ? ? ? A . n A 1 111 PRO 111 117 ? ? ? A . n A 1 112 LYS 112 118 ? ? ? A . n A 1 113 GLN 113 119 ? ? ? A . n A 1 114 TYR 114 120 ? ? ? A . n A 1 115 SER 115 121 ? ? ? A . n A 1 116 THR 116 122 ? ? ? A . n A 1 117 LYS 117 123 ? ? ? A . n A 1 118 GLY 118 124 ? ? ? A . n A 1 119 GLY 119 125 ? ? ? A . n A 1 120 MET 120 126 ? ? ? A . n A 1 121 GLY 121 127 ? ? ? A . n A 1 122 ALA 122 128 ? ? ? A . n A 1 123 ALA 123 129 129 ALA ALA A . n A 1 124 LEU 124 130 130 LEU LEU A . n A 1 125 LEU 125 131 131 LEU LEU A . n A 1 126 SER 126 132 132 SER SER A . n A 1 127 ASP 127 133 133 ASP ASP A . n A 1 128 PRO 128 134 134 PRO PRO A . n A 1 129 ASP 129 135 135 ASP ASP A . n A 1 130 LYS 130 136 136 LYS LYS A . n A 1 131 ILE 131 137 137 ILE ILE A . n A 1 132 GLU 132 138 138 GLU GLU A . n A 1 133 LYS 133 139 139 LYS LYS A . n A 1 134 ILE 134 140 140 ILE ILE A . n A 1 135 LEU 135 141 141 LEU LEU A . n A 1 136 SER 136 142 142 SER SER A . n A 1 137 THR 137 143 143 THR THR A . n A 1 138 LEU 138 144 144 LEU LEU A . n A 1 139 VAL 139 145 145 VAL VAL A . n A 1 140 LYS 140 146 146 LYS LYS A . n A 1 141 GLY 141 147 147 GLY GLY A . n A 1 142 THR 142 148 148 THR THR A . n A 1 143 ARG 143 149 149 ARG ARG A . n A 1 144 ARG 144 150 150 ARG ARG A . n A 1 145 PRO 145 151 151 PRO PRO A . n A 1 146 VAL 146 152 152 VAL VAL A . n A 1 147 THR 147 153 153 THR THR A . n A 1 148 CYS 148 154 154 CYS CYS A . n A 1 149 LYS 149 155 155 LYS LYS A . n A 1 150 ILE 150 156 156 ILE ILE A . n A 1 151 ARG 151 157 157 ARG ARG A . n A 1 152 ILE 152 158 158 ILE ILE A . n A 1 153 LEU 153 159 159 LEU LEU A . n A 1 154 PRO 154 160 160 PRO PRO A . n A 1 155 SER 155 161 161 SER SER A . n A 1 156 LEU 156 162 162 LEU LEU A . n A 1 157 GLU 157 163 163 GLU GLU A . n A 1 158 ASP 158 164 164 ASP ASP A . n A 1 159 THR 159 165 165 THR THR A . n A 1 160 LEU 160 166 166 LEU LEU A . n A 1 161 SER 161 167 167 SER SER A . n A 1 162 LEU 162 168 168 LEU LEU A . n A 1 163 VAL 163 169 169 VAL VAL A . n A 1 164 LYS 164 170 170 LYS LYS A . n A 1 165 ARG 165 171 171 ARG ARG A . n A 1 166 ILE 166 172 172 ILE ILE A . n A 1 167 GLU 167 173 173 GLU GLU A . n A 1 168 ARG 168 174 174 ARG ARG A . n A 1 169 THR 169 175 175 THR THR A . n A 1 170 GLY 170 176 176 GLY GLY A . n A 1 171 ILE 171 177 177 ILE ILE A . n A 1 172 ALA 172 178 178 ALA ALA A . n A 1 173 ALA 173 179 179 ALA ALA A . n A 1 174 ILE 174 180 180 ILE ILE A . n A 1 175 ALA 175 181 181 ALA ALA A . n A 1 176 VAL 176 182 182 VAL VAL A . n A 1 177 HIS 177 183 183 HIS HIS A . n A 1 178 GLY 178 184 184 GLY GLY A . n A 1 179 ARG 179 185 185 ARG ARG A . n A 1 180 LYS 180 186 186 LYS LYS A . n A 1 181 ARG 181 187 187 ARG ARG A . n A 1 182 GLU 182 188 188 GLU GLU A . n A 1 183 GLU 183 189 189 GLU GLU A . n A 1 184 ARG 184 190 190 ARG ARG A . n A 1 185 PRO 185 191 191 PRO PRO A . n A 1 186 GLN 186 192 192 GLN GLN A . n A 1 187 HIS 187 193 193 HIS HIS A . n A 1 188 PRO 188 194 194 PRO PRO A . n A 1 189 VAL 189 195 195 VAL VAL A . n A 1 190 SER 190 196 196 SER SER A . n A 1 191 CYS 191 197 197 CYS CYS A . n A 1 192 GLU 192 198 198 GLU GLU A . n A 1 193 VAL 193 199 199 VAL VAL A . n A 1 194 ILE 194 200 200 ILE ILE A . n A 1 195 LYS 195 201 201 LYS LYS A . n A 1 196 ALA 196 202 202 ALA ALA A . n A 1 197 ILE 197 203 203 ILE ILE A . n A 1 198 ALA 198 204 204 ALA ALA A . n A 1 199 ASP 199 205 205 ASP ASP A . n A 1 200 THR 200 206 206 THR THR A . n A 1 201 LEU 201 207 207 LEU LEU A . n A 1 202 SER 202 208 208 SER SER A . n A 1 203 ILE 203 209 209 ILE ILE A . n A 1 204 PRO 204 210 210 PRO PRO A . n A 1 205 VAL 205 211 211 VAL VAL A . n A 1 206 ILE 206 212 212 ILE ILE A . n A 1 207 ALA 207 213 213 ALA ALA A . n A 1 208 ASN 208 214 214 ASN ASN A . n A 1 209 GLY 209 215 215 GLY GLY A . n A 1 210 GLY 210 216 216 GLY GLY A . n A 1 211 SER 211 217 217 SER SER A . n A 1 212 HIS 212 218 218 HIS HIS A . n A 1 213 ASP 213 219 219 ASP ASP A . n A 1 214 HIS 214 220 220 HIS HIS A . n A 1 215 ILE 215 221 221 ILE ILE A . n A 1 216 GLN 216 222 222 GLN GLN A . n A 1 217 GLN 217 223 223 GLN GLN A . n A 1 218 TYR 218 224 224 TYR TYR A . n A 1 219 SER 219 225 225 SER SER A . n A 1 220 ASP 220 226 226 ASP ASP A . n A 1 221 ILE 221 227 227 ILE ILE A . n A 1 222 GLU 222 228 228 GLU GLU A . n A 1 223 ASP 223 229 229 ASP ASP A . n A 1 224 PHE 224 230 230 PHE PHE A . n A 1 225 ARG 225 231 231 ARG ARG A . n A 1 226 GLN 226 232 232 GLN GLN A . n A 1 227 ALA 227 233 233 ALA ALA A . n A 1 228 THR 228 234 234 THR THR A . n A 1 229 ALA 229 235 235 ALA ALA A . n A 1 230 ALA 230 236 236 ALA ALA A . n A 1 231 SER 231 237 237 SER SER A . n A 1 232 SER 232 238 238 SER SER A . n A 1 233 VAL 233 239 239 VAL VAL A . n A 1 234 MET 234 240 240 MET MET A . n A 1 235 VAL 235 241 241 VAL VAL A . n A 1 236 ALA 236 242 242 ALA ALA A . n A 1 237 ARG 237 243 243 ARG ARG A . n A 1 238 ALA 238 244 244 ALA ALA A . n A 1 239 ALA 239 245 245 ALA ALA A . n A 1 240 MET 240 246 246 MET MET A . n A 1 241 TRP 241 247 247 TRP TRP A . n A 1 242 ASN 242 248 248 ASN ASN A . n A 1 243 PRO 243 249 249 PRO PRO A . n A 1 244 SER 244 250 250 SER SER A . n A 1 245 ILE 245 251 251 ILE ILE A . n A 1 246 PHE 246 252 252 PHE PHE A . n A 1 247 LEU 247 253 253 LEU LEU A . n A 1 248 LYS 248 254 254 LYS LYS A . n A 1 249 GLU 249 255 255 GLU GLU A . n A 1 250 GLY 250 256 256 GLY GLY A . n A 1 251 LEU 251 257 257 LEU LEU A . n A 1 252 ARG 252 258 258 ARG ARG A . n A 1 253 PRO 253 259 259 PRO PRO A . n A 1 254 LEU 254 260 260 LEU LEU A . n A 1 255 GLU 255 261 261 GLU GLU A . n A 1 256 GLU 256 262 262 GLU GLU A . n A 1 257 VAL 257 263 263 VAL VAL A . n A 1 258 MET 258 264 264 MET MET A . n A 1 259 GLN 259 265 265 GLN GLN A . n A 1 260 LYS 260 266 266 LYS LYS A . n A 1 261 TYR 261 267 267 TYR TYR A . n A 1 262 ILE 262 268 268 ILE ILE A . n A 1 263 ARG 263 269 269 ARG ARG A . n A 1 264 TYR 264 270 270 TYR TYR A . n A 1 265 ALA 265 271 271 ALA ALA A . n A 1 266 VAL 266 272 272 VAL VAL A . n A 1 267 GLN 267 273 273 GLN GLN A . n A 1 268 TYR 268 274 274 TYR TYR A . n A 1 269 ASP 269 275 275 ASP ASP A . n A 1 270 ASN 270 276 276 ASN ASN A . n A 1 271 HIS 271 277 277 HIS HIS A . n A 1 272 TYR 272 278 278 TYR TYR A . n A 1 273 THR 273 279 279 THR THR A . n A 1 274 ASN 274 280 280 ASN ASN A . n A 1 275 THR 275 281 281 THR THR A . n A 1 276 LYS 276 282 282 LYS LYS A . n A 1 277 TYR 277 283 283 TYR TYR A . n A 1 278 CYS 278 284 284 CYS CYS A . n A 1 279 LEU 279 285 285 LEU LEU A . n A 1 280 CYS 280 286 286 CYS CYS A . n A 1 281 GLN 281 287 287 GLN GLN A . n A 1 282 MET 282 288 288 MET MET A . n A 1 283 LEU 283 289 289 LEU LEU A . n A 1 284 ARG 284 290 290 ARG ARG A . n A 1 285 GLU 285 291 291 GLU GLU A . n A 1 286 GLN 286 292 292 GLN GLN A . n A 1 287 LEU 287 293 293 LEU LEU A . n A 1 288 GLU 288 294 294 GLU GLU A . n A 1 289 SER 289 295 295 SER SER A . n A 1 290 PRO 290 296 296 PRO PRO A . n A 1 291 GLN 291 297 297 GLN GLN A . n A 1 292 GLY 292 298 298 GLY GLY A . n A 1 293 ARG 293 299 299 ARG ARG A . n A 1 294 LEU 294 300 300 LEU LEU A . n A 1 295 LEU 295 301 301 LEU LEU A . n A 1 296 HIS 296 302 302 HIS HIS A . n A 1 297 ALA 297 303 303 ALA ALA A . n A 1 298 ALA 298 304 304 ALA ALA A . n A 1 299 GLN 299 305 305 GLN GLN A . n A 1 300 SER 300 306 306 SER SER A . n A 1 301 SER 301 307 307 SER SER A . n A 1 302 ARG 302 308 308 ARG ARG A . n A 1 303 GLU 303 309 309 GLU GLU A . n A 1 304 ILE 304 310 310 ILE ILE A . n A 1 305 CYS 305 311 311 CYS CYS A . n A 1 306 GLU 306 312 312 GLU GLU A . n A 1 307 ALA 307 313 313 ALA ALA A . n A 1 308 PHE 308 314 314 PHE PHE A . n A 1 309 GLY 309 315 315 GLY GLY A . n A 1 310 LEU 310 316 316 LEU LEU A . n A 1 311 GLY 311 317 317 GLY GLY A . n A 1 312 ALA 312 318 318 ALA ALA A . n A 1 313 PHE 313 319 319 PHE PHE A . n A 1 314 TYR 314 320 320 TYR TYR A . n A 1 315 GLU 315 321 321 GLU GLU A . n A 1 316 GLU 316 322 322 GLU GLU A . n A 1 317 THR 317 323 323 THR THR A . n A 1 318 THR 318 324 324 THR THR A . n A 1 319 GLN 319 325 325 GLN GLN A . n A 1 320 GLU 320 326 326 GLU GLU A . n A 1 321 LEU 321 327 327 LEU LEU A . n A 1 322 ASP 322 328 328 ASP ASP A . n A 1 323 ALA 323 329 329 ALA ALA A . n A 1 324 GLN 324 330 330 GLN GLN A . n A 1 325 GLN 325 331 ? ? ? A . n A 1 326 ALA 326 332 ? ? ? A . n A 1 327 ARG 327 333 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN 1 401 1 FMN FMN A . C 3 SO4 1 402 1 SO4 SO4 A . D 3 SO4 1 403 1 SO4 SO4 A . E 3 SO4 1 404 1 SO4 SO4 A . F 3 SO4 1 405 1 SO4 SO4 A . G 4 CL 1 406 1 CL CL A . H 5 HOH 1 501 16 HOH HOH A . H 5 HOH 2 502 19 HOH HOH A . H 5 HOH 3 503 8 HOH HOH A . H 5 HOH 4 504 26 HOH HOH A . H 5 HOH 5 505 25 HOH HOH A . H 5 HOH 6 506 23 HOH HOH A . H 5 HOH 7 507 18 HOH HOH A . H 5 HOH 8 508 20 HOH HOH A . H 5 HOH 9 509 21 HOH HOH A . H 5 HOH 10 510 22 HOH HOH A . H 5 HOH 11 511 1 HOH HOH A . H 5 HOH 12 512 2 HOH HOH A . H 5 HOH 13 513 3 HOH HOH A . H 5 HOH 14 514 4 HOH HOH A . H 5 HOH 15 515 5 HOH HOH A . H 5 HOH 16 516 6 HOH HOH A . H 5 HOH 17 517 7 HOH HOH A . H 5 HOH 18 518 9 HOH HOH A . H 5 HOH 19 519 10 HOH HOH A . H 5 HOH 20 520 11 HOH HOH A . H 5 HOH 21 521 13 HOH HOH A . H 5 HOH 22 522 14 HOH HOH A . H 5 HOH 23 523 15 HOH HOH A . H 5 HOH 24 524 17 HOH HOH A . H 5 HOH 25 525 27 HOH HOH A . H 5 HOH 26 526 29 HOH HOH A . H 5 HOH 27 527 30 HOH HOH A . H 5 HOH 28 528 31 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details Monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1620 ? 1 MORE -64 ? 1 'SSA (A^2)' 13410 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-07 2 'Structure model' 1 1 2015-10-14 3 'Structure model' 1 2 2015-11-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.0 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 308 ? ? O A HOH 509 ? ? 0.98 2 1 CZ A ARG 308 ? ? O A HOH 509 ? ? 1.45 3 1 NH2 A ARG 308 ? ? O A HOH 509 ? ? 1.83 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 21 ? ? 64.83 -51.82 2 1 GLU A 42 ? ? -48.90 156.74 3 1 MET A 114 ? ? -143.13 43.17 4 1 HIS A 218 ? ? 69.62 -69.13 5 1 ALA A 242 ? ? -109.82 -87.20 6 1 ARG A 290 ? ? 55.32 -110.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 12 ? CG ? A HIS 6 CG 2 1 Y 1 A HIS 12 ? ND1 ? A HIS 6 ND1 3 1 Y 1 A HIS 12 ? CD2 ? A HIS 6 CD2 4 1 Y 1 A HIS 12 ? CE1 ? A HIS 6 CE1 5 1 Y 1 A HIS 12 ? NE2 ? A HIS 6 NE2 6 1 Y 1 A ARG 71 ? CG ? A ARG 65 CG 7 1 Y 1 A ARG 71 ? CD ? A ARG 65 CD 8 1 Y 1 A ARG 71 ? NE ? A ARG 65 NE 9 1 Y 1 A ARG 71 ? CZ ? A ARG 65 CZ 10 1 Y 1 A ARG 71 ? NH1 ? A ARG 65 NH1 11 1 Y 1 A ARG 71 ? NH2 ? A ARG 65 NH2 12 1 Y 1 A ARG 79 ? NE ? A ARG 73 NE 13 1 Y 1 A ARG 79 ? CZ ? A ARG 73 CZ 14 1 Y 1 A ARG 79 ? NH1 ? A ARG 73 NH1 15 1 Y 1 A ARG 79 ? NH2 ? A ARG 73 NH2 16 1 Y 1 A SER 132 ? OG ? A SER 126 OG 17 1 Y 1 A ASP 135 ? CG ? A ASP 129 CG 18 1 Y 1 A ASP 135 ? OD1 ? A ASP 129 OD1 19 1 Y 1 A ASP 135 ? OD2 ? A ASP 129 OD2 20 1 Y 1 A GLU 138 ? CG ? A GLU 132 CG 21 1 Y 1 A GLU 138 ? CD ? A GLU 132 CD 22 1 Y 1 A GLU 138 ? OE1 ? A GLU 132 OE1 23 1 Y 1 A GLU 138 ? OE2 ? A GLU 132 OE2 24 1 Y 1 A ARG 171 ? CG ? A ARG 165 CG 25 1 Y 1 A ARG 171 ? CD ? A ARG 165 CD 26 1 Y 1 A ARG 171 ? NE ? A ARG 165 NE 27 1 Y 1 A ARG 171 ? CZ ? A ARG 165 CZ 28 1 Y 1 A ARG 171 ? NH1 ? A ARG 165 NH1 29 1 Y 1 A ARG 171 ? NH2 ? A ARG 165 NH2 30 1 Y 1 A LYS 186 ? CG ? A LYS 180 CG 31 1 Y 1 A LYS 186 ? CD ? A LYS 180 CD 32 1 Y 1 A LYS 186 ? CE ? A LYS 180 CE 33 1 Y 1 A LYS 186 ? NZ ? A LYS 180 NZ 34 1 Y 1 A ARG 187 ? CG ? A ARG 181 CG 35 1 Y 1 A ARG 187 ? CD ? A ARG 181 CD 36 1 Y 1 A ARG 187 ? NE ? A ARG 181 NE 37 1 Y 1 A ARG 187 ? CZ ? A ARG 181 CZ 38 1 Y 1 A ARG 187 ? NH1 ? A ARG 181 NH1 39 1 Y 1 A ARG 187 ? NH2 ? A ARG 181 NH2 40 1 Y 1 A GLU 188 ? CG ? A GLU 182 CG 41 1 Y 1 A GLU 188 ? CD ? A GLU 182 CD 42 1 Y 1 A GLU 188 ? OE1 ? A GLU 182 OE1 43 1 Y 1 A GLU 188 ? OE2 ? A GLU 182 OE2 44 1 Y 1 A ARG 190 ? CG ? A ARG 184 CG 45 1 Y 1 A ARG 190 ? CD ? A ARG 184 CD 46 1 Y 1 A ARG 190 ? NE ? A ARG 184 NE 47 1 Y 1 A ARG 190 ? CZ ? A ARG 184 CZ 48 1 Y 1 A ARG 190 ? NH1 ? A ARG 184 NH1 49 1 Y 1 A ARG 190 ? NH2 ? A ARG 184 NH2 50 1 Y 1 A GLN 192 ? CG ? A GLN 186 CG 51 1 Y 1 A GLN 192 ? CD ? A GLN 186 CD 52 1 Y 1 A GLN 192 ? OE1 ? A GLN 186 OE1 53 1 Y 1 A GLN 192 ? NE2 ? A GLN 186 NE2 54 1 Y 1 A GLU 291 ? CG ? A GLU 285 CG 55 1 Y 1 A GLU 291 ? CD ? A GLU 285 CD 56 1 Y 1 A GLU 291 ? OE1 ? A GLU 285 OE1 57 1 Y 1 A GLU 291 ? OE2 ? A GLU 285 OE2 58 1 Y 1 A GLN 292 ? OE1 ? A GLN 286 OE1 59 1 Y 1 A GLN 292 ? NE2 ? A GLN 286 NE2 60 1 Y 1 A GLU 294 ? OE1 ? A GLU 288 OE1 61 1 Y 1 A GLU 294 ? OE2 ? A GLU 288 OE2 62 1 Y 1 A GLU 321 ? CG ? A GLU 315 CG 63 1 Y 1 A GLU 321 ? CD ? A GLU 315 CD 64 1 Y 1 A GLU 321 ? OE1 ? A GLU 315 OE1 65 1 Y 1 A GLU 321 ? OE2 ? A GLU 315 OE2 66 1 Y 1 A GLN 325 ? CG ? A GLN 319 CG 67 1 Y 1 A GLN 325 ? CD ? A GLN 319 CD 68 1 Y 1 A GLN 325 ? OE1 ? A GLN 319 OE1 69 1 Y 1 A GLN 325 ? NE2 ? A GLN 319 NE2 70 1 Y 1 A GLU 326 ? CG ? A GLU 320 CG 71 1 Y 1 A GLU 326 ? CD ? A GLU 320 CD 72 1 Y 1 A GLU 326 ? OE1 ? A GLU 320 OE1 73 1 Y 1 A GLU 326 ? OE2 ? A GLU 320 OE2 74 1 Y 1 A GLN 330 ? CG ? A GLN 324 CG 75 1 Y 1 A GLN 330 ? CD ? A GLN 324 CD 76 1 Y 1 A GLN 330 ? OE1 ? A GLN 324 OE1 77 1 Y 1 A GLN 330 ? NE2 ? A GLN 324 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 7 ? A MET 1 2 1 Y 1 A HIS 8 ? A HIS 2 3 1 Y 1 A HIS 9 ? A HIS 3 4 1 Y 1 A HIS 10 ? A HIS 4 5 1 Y 1 A HIS 11 ? A HIS 5 6 1 Y 1 A CYS 116 ? A CYS 110 7 1 Y 1 A PRO 117 ? A PRO 111 8 1 Y 1 A LYS 118 ? A LYS 112 9 1 Y 1 A GLN 119 ? A GLN 113 10 1 Y 1 A TYR 120 ? A TYR 114 11 1 Y 1 A SER 121 ? A SER 115 12 1 Y 1 A THR 122 ? A THR 116 13 1 Y 1 A LYS 123 ? A LYS 117 14 1 Y 1 A GLY 124 ? A GLY 118 15 1 Y 1 A GLY 125 ? A GLY 119 16 1 Y 1 A MET 126 ? A MET 120 17 1 Y 1 A GLY 127 ? A GLY 121 18 1 Y 1 A ALA 128 ? A ALA 122 19 1 Y 1 A GLN 331 ? A GLN 325 20 1 Y 1 A ALA 332 ? A ALA 326 21 1 Y 1 A ARG 333 ? A ARG 327 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN MONONUCLEOTIDE' FMN 3 'SULFATE ION' SO4 4 'CHLORIDE ION' CL 5 water HOH #