HEADER HYDROLASE 17-SEP-14 4WG1 TITLE ROOM TEMPERATURE CRYSTAL STRUCTURE OF LYSOZYME DETERMINED BY SERIAL TITLE 2 SYNCHROTRON CRYSTALLOGRAPHY (MICRO FOCUSED BEAM - CRYSTFEL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS SERIAL CRYSTALLOGRAPHY, SERIAL SYNCHROTRON CRYSTALLOGRAPHY, CRYSTFEL, KEYWDS 2 NANOPEAKCELL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.COQUELLE,A.S.BREWSTER,U.KAPP,A.SHILOVA,B.WEIMHAUSEN,N.K.SAUTER, AUTHOR 2 M.BURGHAMMER,J.P.COLLETIER REVDAT 6 13-NOV-24 4WG1 1 REMARK REVDAT 5 10-JAN-24 4WG1 1 REMARK REVDAT 4 27-JUL-16 4WG1 1 JRNL REVDAT 3 20-MAY-15 4WG1 1 JRNL REVDAT 2 13-MAY-15 4WG1 1 JRNL REVDAT 1 06-MAY-15 4WG1 0 JRNL AUTH N.COQUELLE,A.S.BREWSTER,U.KAPP,A.SHILOVA,B.WEINHAUSEN, JRNL AUTH 2 M.BURGHAMMER,J.P.COLLETIER JRNL TITL RASTER-SCANNING SERIAL PROTEIN CRYSTALLOGRAPHY USING MICRO- JRNL TITL 2 AND NANO-FOCUSED SYNCHROTRON BEAMS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1184 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 25945583 JRNL DOI 10.1107/S1399004715004514 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.1409 - 2.9069 1.00 2708 143 0.1958 0.2284 REMARK 3 2 2.9069 - 2.3072 1.00 2570 135 0.2580 0.2700 REMARK 3 3 2.3072 - 2.0156 1.00 2523 133 0.2368 0.2593 REMARK 3 4 2.0156 - 1.8313 1.00 2511 132 0.2968 0.3328 REMARK 3 5 1.8313 - 1.7000 0.99 2491 131 0.3814 0.4265 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1077 REMARK 3 ANGLE : 0.864 1457 REMARK 3 CHIRALITY : 0.038 150 REMARK 3 PLANARITY : 0.003 193 REMARK 3 DIHEDRAL : 12.409 389 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6286 -6.4260 28.5330 REMARK 3 T TENSOR REMARK 3 T11: 0.3070 T22: 0.3585 REMARK 3 T33: 0.2921 T12: 0.0686 REMARK 3 T13: 0.0677 T23: 0.0395 REMARK 3 L TENSOR REMARK 3 L11: 0.1032 L22: 0.4746 REMARK 3 L33: 0.1917 L12: -0.0224 REMARK 3 L13: 0.1129 L23: -0.1985 REMARK 3 S TENSOR REMARK 3 S11: -0.2479 S12: -0.2579 S13: -0.2618 REMARK 3 S21: 0.6211 S22: 0.1411 S23: 0.0102 REMARK 3 S31: -0.0288 S32: -0.5513 S33: -0.0134 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4052 -6.7504 20.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.2973 T22: 0.2753 REMARK 3 T33: 0.3113 T12: 0.0073 REMARK 3 T13: 0.0311 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.8227 L22: 0.0767 REMARK 3 L33: 0.7075 L12: -0.2398 REMARK 3 L13: -0.1533 L23: 0.1075 REMARK 3 S TENSOR REMARK 3 S11: -0.1865 S12: 0.1392 S13: -0.3450 REMARK 3 S21: 0.1006 S22: -0.0393 S23: 0.0099 REMARK 3 S31: 0.3909 S32: -0.0285 S33: -0.0005 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8605 9.9596 19.8178 REMARK 3 T TENSOR REMARK 3 T11: 0.2933 T22: 0.3341 REMARK 3 T33: 0.3485 T12: 0.0490 REMARK 3 T13: 0.0341 T23: 0.0651 REMARK 3 L TENSOR REMARK 3 L11: 0.1037 L22: 0.2746 REMARK 3 L33: 0.0240 L12: 0.0890 REMARK 3 L13: -0.0671 L23: -0.0876 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: 0.0815 S13: 0.2919 REMARK 3 S21: 0.1744 S22: 0.2639 S23: 0.1604 REMARK 3 S31: -0.2298 S32: -0.2407 S33: 0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4414 6.8349 12.2204 REMARK 3 T TENSOR REMARK 3 T11: 0.3943 T22: 0.3480 REMARK 3 T33: 0.3100 T12: 0.0736 REMARK 3 T13: 0.0114 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 0.0431 L22: 0.2893 REMARK 3 L33: 0.2456 L12: 0.1263 REMARK 3 L13: 0.0222 L23: 0.0819 REMARK 3 S TENSOR REMARK 3 S11: 0.1027 S12: -0.1309 S13: 0.1809 REMARK 3 S21: -0.3988 S22: 0.0746 S23: 0.1413 REMARK 3 S31: -0.1089 S32: 0.1674 S33: 0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9364 4.5766 5.1406 REMARK 3 T TENSOR REMARK 3 T11: 0.4596 T22: 0.5459 REMARK 3 T33: 0.4255 T12: 0.1064 REMARK 3 T13: 0.0036 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 0.0275 L22: 0.0314 REMARK 3 L33: 0.1892 L12: -0.0275 REMARK 3 L13: 0.0641 L23: -0.0792 REMARK 3 S TENSOR REMARK 3 S11: 0.3826 S12: 0.7640 S13: 0.1420 REMARK 3 S21: -0.5944 S22: -0.8839 S23: 0.8199 REMARK 3 S31: -0.0091 S32: 0.3503 S33: -0.0182 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7969 -2.3066 14.6706 REMARK 3 T TENSOR REMARK 3 T11: 0.3839 T22: 0.3393 REMARK 3 T33: 0.3304 T12: -0.0067 REMARK 3 T13: 0.0141 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.5371 L22: 0.4428 REMARK 3 L33: 0.3279 L12: -0.4489 REMARK 3 L13: 0.4554 L23: -0.4138 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.4248 S13: 0.4527 REMARK 3 S21: -0.2961 S22: 0.0216 S23: -0.1235 REMARK 3 S31: 0.1096 S32: -0.0443 S33: -0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1913 3.0264 20.1765 REMARK 3 T TENSOR REMARK 3 T11: 0.4108 T22: 0.3468 REMARK 3 T33: 0.4354 T12: -0.0340 REMARK 3 T13: 0.0047 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 0.9727 L22: 0.6642 REMARK 3 L33: 0.5074 L12: -0.6266 REMARK 3 L13: 0.6876 L23: -0.3713 REMARK 3 S TENSOR REMARK 3 S11: 0.0540 S12: 0.8285 S13: 0.8322 REMARK 3 S21: -0.5395 S22: -0.2208 S23: 0.2608 REMARK 3 S31: -0.1390 S32: 0.5973 S33: 0.0038 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.1981 -8.8705 30.5156 REMARK 3 T TENSOR REMARK 3 T11: 0.3614 T22: 0.4085 REMARK 3 T33: 0.5075 T12: 0.1008 REMARK 3 T13: 0.0060 T23: 0.1235 REMARK 3 L TENSOR REMARK 3 L11: 0.8690 L22: 1.3374 REMARK 3 L33: 0.5277 L12: 0.4355 REMARK 3 L13: -0.4738 L23: -0.3802 REMARK 3 S TENSOR REMARK 3 S11: -0.3741 S12: -0.2345 S13: -1.0463 REMARK 3 S21: 0.2317 S22: 0.0919 S23: -0.8951 REMARK 3 S31: -0.0019 S32: -0.1136 S33: -0.0802 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203755. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 55.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 114.8 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JLN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM SODIUM ACETATE PH 4.5, 16% PEG REMARK 280 4K, 3.5M NACL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.17000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.97000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.97000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.75500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.97000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.97000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.58500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.97000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.97000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.75500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.97000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.97000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.58500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 19.17000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 322 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 SER A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASN A 44 OD1 REMARK 480 TRP A 62 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 367 O HOH A 374 1.91 REMARK 500 O HOH A 327 O HOH A 382 1.95 REMARK 500 NH1 ARG A 128 O HOH A 301 2.00 REMARK 500 O HOH A 377 O HOH A 379 2.04 REMARK 500 OD1 ASN A 65 O HOH A 303 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 342 O HOH A 342 8556 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 68 20.07 -145.39 REMARK 500 THR A 69 79.40 -117.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 4WG1 A -17 129 UNP P00698 LYSC_CHICK 1 147 SEQRES 1 A 147 MET ARG SER LEU LEU ILE LEU VAL LEU CYS PHE LEU PRO SEQRES 2 A 147 LEU ALA ALA LEU GLY LYS VAL PHE GLY ARG CYS GLU LEU SEQRES 3 A 147 ALA ALA ALA MET LYS ARG HIS GLY LEU ASP ASN TYR ARG SEQRES 4 A 147 GLY TYR SER LEU GLY ASN TRP VAL CYS ALA ALA LYS PHE SEQRES 5 A 147 GLU SER ASN PHE ASN THR GLN ALA THR ASN ARG ASN THR SEQRES 6 A 147 ASP GLY SER THR ASP TYR GLY ILE LEU GLN ILE ASN SER SEQRES 7 A 147 ARG TRP TRP CYS ASN ASP GLY ARG THR PRO GLY SER ARG SEQRES 8 A 147 ASN LEU CYS ASN ILE PRO CYS SER ALA LEU LEU SER SER SEQRES 9 A 147 ASP ILE THR ALA SER VAL ASN CYS ALA LYS LYS ILE VAL SEQRES 10 A 147 SER ASP GLY ASN GLY MET ASN ALA TRP VAL ALA TRP ARG SEQRES 11 A 147 ASN ARG CYS LYS GLY THR ASP VAL GLN ALA TRP ILE ARG SEQRES 12 A 147 GLY CYS ARG LEU HET CL A 201 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *84(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.03 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.05 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 CRYST1 77.940 77.940 38.340 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012830 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012830 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026082 0.00000