HEADER TRANSFERASE/TRANSFERASE INHIBITOR 17-SEP-14 4WG3 TITLE CALCIUM-DEPENDENT PROTEIN KINASE 1 FROM TOXOPLASMA GONDII (TGCDPK1) IN TITLE 2 COMPLEX WITH INHIBITOR UW1610 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-DOMAIN PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 30-507; COMPND 5 EC: 2.7.11.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 5811; SOURCE 4 GENE: CDPK1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SERINE/THREONINE PROTEIN KINASE, TRANSFERASE, CALCIUM-BINDING, ATP- KEYWDS 2 BINDING, BUMPED KINASE INHIBITOR, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.A.MERRITT REVDAT 4 27-DEC-23 4WG3 1 REMARK REVDAT 3 11-DEC-19 4WG3 1 REMARK REVDAT 2 27-SEP-17 4WG3 1 SOURCE REMARK REVDAT 1 15-OCT-14 4WG3 0 JRNL AUTH E.A.MERRITT JRNL TITL CALCIUM-DEPENDENT PROTEIN KINASE 1 FROM TOXOPLASMA GONDII JRNL TITL 2 (TGCDPK1) IN COMPLEX WITH INHIBITOR UW1610 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.ZHANG,K.K.OJO,R.VIDADALA,W.HUANG,J.A.GEIGER,S.SCHEELE, REMARK 1 AUTH 2 R.CHOI,M.C.REID,K.R.KEYLOUN,K.RIVAS,L.K.SIDDARAMAIAH, REMARK 1 AUTH 3 K.M.COMESS,K.P.ROBINSON,P.J.MERTA,L.KIFLE,W.G.HOL,M.PARSONS, REMARK 1 AUTH 4 E.A.MERRITT,D.J.MALY,C.L.VERLINDE,W.C.VAN VOORHIS,E.FAN REMARK 1 TITL POTENT AND SELECTIVE INHIBITORS OF CDPK1 FROM T. GONDII AND REMARK 1 TITL 2 C. PARVUM BASED ON A 5-AMINOPYRAZOLE-4-CARBOXAMIDE SCAFFOLD. REMARK 1 REF ACS MED.CHEM.LETT. V. 5 40 2014 REMARK 1 REFN ISSN 1948-5875 REMARK 1 PMID 24494061 REMARK 1 DOI 10.1021/ML400315S REMARK 1 REFERENCE 2 REMARK 1 AUTH K.K.OJO,E.T.LARSON,K.R.KEYLOUN,L.J.CASTANEDA,A.E.DEROCHER, REMARK 1 AUTH 2 K.K.INAMPUDI,J.E.KIM,T.L.ARAKAKI,R.C.MURPHY,L.ZHANG, REMARK 1 AUTH 3 A.J.NAPULI,D.J.MALY,C.L.VERLINDE,F.S.BUCKNER,M.PARSONS, REMARK 1 AUTH 4 W.G.HOL,E.A.MERRITT,W.C.VAN VOORHIS REMARK 1 TITL TOXOPLASMA GONDII CALCIUM-DEPENDENT PROTEIN KINASE 1 IS A REMARK 1 TITL 2 TARGET FOR SELECTIVE KINASE INHIBITORS. REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 17 602 2010 REMARK 1 REFN ESSN 1545-9985 REMARK 1 PMID 20436472 REMARK 1 DOI 10.1038/NSMB.1818 REMARK 1 REFERENCE 3 REMARK 1 AUTH E.T.LARSON,K.K.OJO,R.C.MURPHY,S.M.JOHNSON,Z.ZHANG,J.E.KIM, REMARK 1 AUTH 2 D.J.LEIBLY,A.M.FOX,M.C.REID,E.J.DALE,B.G.PERERA,J.KIM, REMARK 1 AUTH 3 S.N.HEWITT,W.G.HOL,C.L.VERLINDE,E.FAN,W.C.VAN VOORHIS, REMARK 1 AUTH 4 D.J.MALY,E.A.MERRITT REMARK 1 TITL MULTIPLE DETERMINANTS FOR SELECTIVE INHIBITION OF REMARK 1 TITL 2 APICOMPLEXAN CALCIUM-DEPENDENT PROTEIN KINASE CDPK1. REMARK 1 REF J.MED.CHEM. V. 55 2803 2012 REMARK 1 REFN ISSN 0022-2623 REMARK 1 PMID 22369268 REMARK 1 DOI 10.1021/JM201725V REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 20850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1075 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1487 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.3890 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.4270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3686 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 27 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -1.14000 REMARK 3 B33 (A**2) : 1.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.81000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.374 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.230 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.258 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.649 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3821 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3684 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5145 ; 1.433 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8506 ; 0.768 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 470 ; 5.401 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;37.524 ;24.725 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;16.118 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;15.964 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 564 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4412 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 855 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1853 ; 2.388 ; 3.631 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1854 ; 2.388 ; 3.631 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2318 ; 3.813 ; 5.442 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 87 REMARK 3 ORIGIN FOR THE GROUP (A): 15.0340 14.8110 73.6440 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: 0.0652 REMARK 3 T33: 0.1198 T12: -0.0573 REMARK 3 T13: -0.0667 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 4.5383 L22: 8.4300 REMARK 3 L33: 5.8977 L12: -2.5018 REMARK 3 L13: 1.4498 L23: -2.6018 REMARK 3 S TENSOR REMARK 3 S11: -0.1360 S12: -0.0653 S13: 0.3112 REMARK 3 S21: 0.4485 S22: -0.0371 S23: -0.4680 REMARK 3 S31: -0.2459 S32: 0.1877 S33: 0.1731 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 88 A 213 REMARK 3 ORIGIN FOR THE GROUP (A): 8.9530 14.3580 58.5110 REMARK 3 T TENSOR REMARK 3 T11: 0.0474 T22: 0.0239 REMARK 3 T33: 0.1629 T12: 0.0028 REMARK 3 T13: 0.0108 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.3913 L22: 2.0290 REMARK 3 L33: 4.5684 L12: 0.0849 REMARK 3 L13: 0.5126 L23: -0.3547 REMARK 3 S TENSOR REMARK 3 S11: 0.0456 S12: -0.1216 S13: 0.1363 REMARK 3 S21: -0.0119 S22: -0.0251 S23: -0.1923 REMARK 3 S31: -0.0629 S32: 0.1171 S33: -0.0204 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 214 A 334 REMARK 3 ORIGIN FOR THE GROUP (A): 8.7770 20.8780 40.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.1373 T22: 0.0622 REMARK 3 T33: 0.0306 T12: 0.0418 REMARK 3 T13: 0.0447 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.5200 L22: 4.2907 REMARK 3 L33: 2.6565 L12: -0.1189 REMARK 3 L13: 0.3758 L23: 0.5114 REMARK 3 S TENSOR REMARK 3 S11: 0.1081 S12: 0.3929 S13: 0.0276 REMARK 3 S21: -0.5715 S22: -0.0897 S23: -0.2487 REMARK 3 S31: 0.0342 S32: 0.2217 S33: -0.0184 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 335 A 373 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4410 34.7500 74.7790 REMARK 3 T TENSOR REMARK 3 T11: 0.1979 T22: 0.1227 REMARK 3 T33: 0.2323 T12: 0.0264 REMARK 3 T13: -0.0134 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 0.2014 L22: 0.5974 REMARK 3 L33: 10.2099 L12: 0.1682 REMARK 3 L13: 0.2395 L23: 1.4568 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: -0.0027 S13: 0.0414 REMARK 3 S21: 0.1857 S22: -0.0280 S23: -0.0533 REMARK 3 S31: -0.0509 S32: -0.0469 S33: 0.0129 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 374 A 436 REMARK 3 ORIGIN FOR THE GROUP (A): 29.3210 26.3430 84.6920 REMARK 3 T TENSOR REMARK 3 T11: 0.5110 T22: 0.2188 REMARK 3 T33: 0.3506 T12: 0.0284 REMARK 3 T13: -0.1737 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 6.3191 L22: 7.2791 REMARK 3 L33: 6.8268 L12: -3.5618 REMARK 3 L13: -2.1595 L23: -0.6507 REMARK 3 S TENSOR REMARK 3 S11: -0.0670 S12: 0.2559 S13: 0.1932 REMARK 3 S21: 0.0344 S22: -0.0534 S23: 0.0262 REMARK 3 S31: -0.0311 S32: -0.1054 S33: 0.1204 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 437 A 507 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0310 37.3600 54.3290 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.0499 REMARK 3 T33: 0.1869 T12: -0.0030 REMARK 3 T13: 0.0027 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 7.2265 L22: 2.5286 REMARK 3 L33: 5.2810 L12: -2.5706 REMARK 3 L13: -1.1929 L23: 1.9405 REMARK 3 S TENSOR REMARK 3 S11: -0.1287 S12: -0.0588 S13: 0.2028 REMARK 3 S21: 0.1933 S22: 0.1811 S23: 0.0153 REMARK 3 S31: -0.2807 S32: 0.1377 S33: -0.0524 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 601 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): 13.8160 14.8920 63.3880 REMARK 3 T TENSOR REMARK 3 T11: 0.2531 T22: 0.2606 REMARK 3 T33: 0.2468 T12: -0.0360 REMARK 3 T13: 0.0730 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 5.8083 L22: 13.9127 REMARK 3 L33: 13.1314 L12: -2.8704 REMARK 3 L13: 8.5092 L23: -1.3328 REMARK 3 S TENSOR REMARK 3 S11: -0.2397 S12: -0.2067 S13: 0.1358 REMARK 3 S21: -0.1523 S22: 0.1511 S23: -0.4407 REMARK 3 S31: -0.3820 S32: -0.2725 S33: 0.0886 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4WG3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203760. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 0.3.6 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 65.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.17500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 2.15800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG 3350, 250 MM AMMONIUM CITRATE, REMARK 280 2 MM EDTA, 5 MM DTT, 2 MM UW1610, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.31500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 24 REMARK 465 PRO A 25 REMARK 465 GLY A 26 REMARK 465 SER A 27 REMARK 465 MET A 28 REMARK 465 MET A 29 REMARK 465 ASP A 30 REMARK 465 HIS A 31 REMARK 465 LEU A 32 REMARK 465 HIS A 33 REMARK 465 ALA A 34 REMARK 465 THR A 35 REMARK 465 PRO A 36 REMARK 465 GLY A 37 REMARK 465 MET A 38 REMARK 465 PHE A 39 REMARK 465 VAL A 40 REMARK 465 GLN A 41 REMARK 465 HIS A 42 REMARK 465 GLU A 314 REMARK 465 GLN A 315 REMARK 465 ILE A 316 REMARK 465 SER A 317 REMARK 465 VAL A 318 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 62 -9.86 75.34 REMARK 500 ARG A 173 -36.35 77.05 REMARK 500 SER A 186 -164.37 -68.00 REMARK 500 ASP A 188 37.04 -94.49 REMARK 500 MET A 397 69.61 -107.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue UWA A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WG4 RELATED DB: PDB REMARK 900 RELATED ID: 4WG5 RELATED DB: PDB DBREF 4WG3 A 30 507 UNP Q9BJF5 Q9BJF5_TOXGO 30 507 SEQADV 4WG3 GLY A 24 UNP Q9BJF5 EXPRESSION TAG SEQADV 4WG3 PRO A 25 UNP Q9BJF5 EXPRESSION TAG SEQADV 4WG3 GLY A 26 UNP Q9BJF5 EXPRESSION TAG SEQADV 4WG3 SER A 27 UNP Q9BJF5 EXPRESSION TAG SEQADV 4WG3 MET A 28 UNP Q9BJF5 EXPRESSION TAG SEQADV 4WG3 MET A 29 UNP Q9BJF5 EXPRESSION TAG SEQRES 1 A 484 GLY PRO GLY SER MET MET ASP HIS LEU HIS ALA THR PRO SEQRES 2 A 484 GLY MET PHE VAL GLN HIS SER THR ALA ILE PHE SER ASP SEQRES 3 A 484 ARG TYR LYS GLY GLN ARG VAL LEU GLY LYS GLY SER PHE SEQRES 4 A 484 GLY GLU VAL ILE LEU CYS LYS ASP LYS ILE THR GLY GLN SEQRES 5 A 484 GLU CYS ALA VAL LYS VAL ILE SER LYS ARG GLN VAL LYS SEQRES 6 A 484 GLN LYS THR ASP LYS GLU SER LEU LEU ARG GLU VAL GLN SEQRES 7 A 484 LEU LEU LYS GLN LEU ASP HIS PRO ASN ILE MET LYS LEU SEQRES 8 A 484 TYR GLU PHE PHE GLU ASP LYS GLY TYR PHE TYR LEU VAL SEQRES 9 A 484 GLY GLU VAL TYR THR GLY GLY GLU LEU PHE ASP GLU ILE SEQRES 10 A 484 ILE SER ARG LYS ARG PHE SER GLU VAL ASP ALA ALA ARG SEQRES 11 A 484 ILE ILE ARG GLN VAL LEU SER GLY ILE THR TYR MET HIS SEQRES 12 A 484 LYS ASN LYS ILE VAL HIS ARG ASP LEU LYS PRO GLU ASN SEQRES 13 A 484 LEU LEU LEU GLU SER LYS SER LYS ASP ALA ASN ILE ARG SEQRES 14 A 484 ILE ILE ASP PHE GLY LEU SER THR HIS PHE GLU ALA SER SEQRES 15 A 484 LYS LYS MET LYS ASP LYS ILE GLY THR ALA TYR TYR ILE SEQRES 16 A 484 ALA PRO GLU VAL LEU HIS GLY THR TYR ASP GLU LYS CYS SEQRES 17 A 484 ASP VAL TRP SER THR GLY VAL ILE LEU TYR ILE LEU LEU SEQRES 18 A 484 SER GLY CYS PRO PRO PHE ASN GLY ALA ASN GLU TYR ASP SEQRES 19 A 484 ILE LEU LYS LYS VAL GLU LYS GLY LYS TYR THR PHE GLU SEQRES 20 A 484 LEU PRO GLN TRP LYS LYS VAL SER GLU SER ALA LYS ASP SEQRES 21 A 484 LEU ILE ARG LYS MET LEU THR TYR VAL PRO SER MET ARG SEQRES 22 A 484 ILE SER ALA ARG ASP ALA LEU ASP HIS GLU TRP ILE GLN SEQRES 23 A 484 THR TYR THR LYS GLU GLN ILE SER VAL ASP VAL PRO SER SEQRES 24 A 484 LEU ASP ASN ALA ILE LEU ASN ILE ARG GLN PHE GLN GLY SEQRES 25 A 484 THR GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR MET GLY SEQRES 26 A 484 SER LYS LEU THR SER GLN ASP GLU THR LYS GLU LEU THR SEQRES 27 A 484 ALA ILE PHE HIS LYS MET ASP LYS ASN GLY ASP GLY GLN SEQRES 28 A 484 LEU ASP ARG ALA GLU LEU ILE GLU GLY TYR LYS GLU LEU SEQRES 29 A 484 MET ARG MET LYS GLY GLN ASP ALA SER MET LEU ASP ALA SEQRES 30 A 484 SER ALA VAL GLU HIS GLU VAL ASP GLN VAL LEU ASP ALA SEQRES 31 A 484 VAL ASP PHE ASP LYS ASN GLY TYR ILE GLU TYR SER GLU SEQRES 32 A 484 PHE VAL THR VAL ALA MET ASP ARG LYS THR LEU LEU SER SEQRES 33 A 484 ARG GLU ARG LEU GLU ARG ALA PHE ARG MET PHE ASP SER SEQRES 34 A 484 ASP ASN SER GLY LYS ILE SER SER THR GLU LEU ALA THR SEQRES 35 A 484 ILE PHE GLY VAL SER ASP VAL ASP SER GLU THR TRP LYS SEQRES 36 A 484 SER VAL LEU SER GLU VAL ASP LYS ASN ASN ASP GLY GLU SEQRES 37 A 484 VAL ASP PHE ASP GLU PHE GLN GLN MET LEU LEU LYS LEU SEQRES 38 A 484 CYS GLY ASN HET UWA A 601 27 HETNAM UWA 3-(7-ETHOXYNAPHTHALEN-2-YL)-1-(2-METHYLPROPYL)-1H- HETNAM 2 UWA PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE FORMUL 2 UWA C21 H23 N5 O FORMUL 3 HOH *44(H2 O) HELIX 1 AA1 ILE A 46 ARG A 50 1 5 HELIX 2 AA2 ASP A 92 LEU A 106 1 15 HELIX 3 AA3 GLU A 135 SER A 142 1 8 HELIX 4 AA4 SER A 147 ASN A 168 1 22 HELIX 5 AA5 LYS A 176 GLU A 178 5 3 HELIX 6 AA6 GLY A 197 PHE A 202 1 6 HELIX 7 AA7 LYS A 207 ILE A 212 1 6 HELIX 8 AA8 GLY A 213 ILE A 218 1 6 HELIX 9 AA9 ALA A 219 GLY A 225 1 7 HELIX 10 AB1 GLU A 229 GLY A 246 1 18 HELIX 11 AB2 ASN A 254 GLY A 265 1 12 HELIX 12 AB3 LEU A 271 LYS A 275 5 5 HELIX 13 AB4 SER A 278 LEU A 289 1 12 HELIX 14 AB5 VAL A 292 ARG A 296 5 5 HELIX 15 AB6 SER A 298 LEU A 303 1 6 HELIX 16 AB7 HIS A 305 THR A 312 1 8 HELIX 17 AB8 LEU A 323 ASP A 368 1 46 HELIX 18 AB9 ARG A 377 LYS A 391 1 15 HELIX 19 AC1 ASP A 399 VAL A 414 1 16 HELIX 20 AC2 TYR A 424 ASP A 451 1 28 HELIX 21 AC3 SER A 460 SER A 470 1 11 HELIX 22 AC4 ASP A 473 ASP A 485 1 13 HELIX 23 AC5 PHE A 494 LEU A 504 1 11 SHEET 1 AA1 5 TYR A 51 GLY A 60 0 SHEET 2 AA1 5 GLY A 63 ASP A 70 -1 O LEU A 67 N GLN A 54 SHEET 3 AA1 5 GLU A 76 SER A 83 -1 O VAL A 79 N ILE A 66 SHEET 4 AA1 5 TYR A 123 GLY A 128 -1 O GLY A 128 N ALA A 78 SHEET 5 AA1 5 LEU A 114 GLU A 119 -1 N PHE A 118 O TYR A 125 SHEET 1 AA2 2 LEU A 180 LEU A 182 0 SHEET 2 AA2 2 ILE A 191 ILE A 193 -1 O ARG A 192 N LEU A 181 SHEET 1 AA3 2 GLN A 374 ASP A 376 0 SHEET 2 AA3 2 TYR A 421 GLU A 423 -1 O ILE A 422 N LEU A 375 SHEET 1 AA4 2 LYS A 457 SER A 459 0 SHEET 2 AA4 2 GLU A 491 ASP A 493 -1 O VAL A 492 N ILE A 458 SITE 1 AC1 13 LEU A 57 LYS A 59 VAL A 65 ALA A 78 SITE 2 AC1 13 LYS A 80 MET A 112 LEU A 126 GLU A 129 SITE 3 AC1 13 TYR A 131 LEU A 181 ASP A 195 PHE A 196 SITE 4 AC1 13 HOH A 726 CRYST1 48.240 72.630 66.990 90.00 103.00 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020730 0.000000 0.004786 0.00000 SCALE2 0.000000 0.013768 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015320 0.00000