HEADER HYDROLASE 18-SEP-14 4WG7 TITLE ROOM-TEMPERATURE CRYSTAL STRUCTURE OF LYSOZYME DETERMINED BY SERIAL TITLE 2 SYNCHROTRON CRYSTALLOGRAPHY USING A NANO FOCUSED BEAM. COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS SERIAL CRYSTALLOGRAPHY, CRYSTFEL, NANOPEAKCELL, NANO FOCUSED BEAM, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.COQUELLE,A.S.BREWSTER,U.KAPPE,A.SHILOVA,B.WEINHAUSEN,M.BURGHAMMER, AUTHOR 2 J.P.COLLETIER REVDAT 6 06-NOV-24 4WG7 1 REMARK REVDAT 5 10-JAN-24 4WG7 1 REMARK REVDAT 4 27-JUL-16 4WG7 1 JRNL REVDAT 3 20-MAY-15 4WG7 1 JRNL REVDAT 2 13-MAY-15 4WG7 1 JRNL REVDAT 1 06-MAY-15 4WG7 0 JRNL AUTH N.COQUELLE,A.S.BREWSTER,U.KAPP,A.SHILOVA,B.WEINHAUSEN, JRNL AUTH 2 M.BURGHAMMER,J.P.COLLETIER JRNL TITL RASTER-SCANNING SERIAL PROTEIN CRYSTALLOGRAPHY USING MICRO- JRNL TITL 2 AND NANO-FOCUSED SYNCHROTRON BEAMS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 71 1184 2015 JRNL REFN ESSN 1399-0047 JRNL PMID 25945583 JRNL DOI 10.1107/S1399004715004514 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13549 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0052 - 2.9067 1.00 2721 142 0.1768 0.2064 REMARK 3 2 2.9067 - 2.3072 1.00 2590 138 0.2322 0.2654 REMARK 3 3 2.3072 - 2.0156 1.00 2535 139 0.2233 0.2761 REMARK 3 4 2.0156 - 1.8313 1.00 2520 132 0.2640 0.3348 REMARK 3 5 1.8313 - 1.7000 1.00 2507 125 0.3937 0.4222 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1109 REMARK 3 ANGLE : 0.935 1502 REMARK 3 CHIRALITY : 0.040 152 REMARK 3 PLANARITY : 0.003 203 REMARK 3 DIHEDRAL : 13.193 410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2604 -8.9649 23.9223 REMARK 3 T TENSOR REMARK 3 T11: 0.3518 T22: 0.2679 REMARK 3 T33: 0.3746 T12: 0.0006 REMARK 3 T13: 0.1022 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 1.2250 L22: 0.1666 REMARK 3 L33: 1.7116 L12: -0.4239 REMARK 3 L13: 1.4645 L23: -0.5160 REMARK 3 S TENSOR REMARK 3 S11: -0.1863 S12: -0.0426 S13: -0.4762 REMARK 3 S21: 0.0365 S22: 0.0848 S23: 0.1823 REMARK 3 S31: 0.0392 S32: -0.1140 S33: -0.0023 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3315 0.3903 25.5543 REMARK 3 T TENSOR REMARK 3 T11: 0.3135 T22: 0.3228 REMARK 3 T33: 0.3146 T12: 0.0297 REMARK 3 T13: 0.0091 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.1407 L22: 0.2245 REMARK 3 L33: 0.5693 L12: 0.1764 REMARK 3 L13: -0.2230 L23: -0.2451 REMARK 3 S TENSOR REMARK 3 S11: -0.3154 S12: 0.0491 S13: -0.0336 REMARK 3 S21: 0.2826 S22: 0.2417 S23: 0.1069 REMARK 3 S31: -0.0486 S32: 0.0437 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4787 14.1741 14.4425 REMARK 3 T TENSOR REMARK 3 T11: 0.4038 T22: 0.4072 REMARK 3 T33: 0.5381 T12: 0.0027 REMARK 3 T13: 0.0982 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.0355 L22: 0.0129 REMARK 3 L33: 0.6312 L12: -0.0170 REMARK 3 L13: -0.0785 L23: 0.0919 REMARK 3 S TENSOR REMARK 3 S11: 0.0394 S12: 0.1356 S13: -0.4700 REMARK 3 S21: -0.4442 S22: 0.0643 S23: -0.4052 REMARK 3 S31: 0.6241 S32: 1.1559 S33: 0.0562 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6124 6.9468 11.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.4232 T22: 0.4311 REMARK 3 T33: 0.3634 T12: 0.0405 REMARK 3 T13: 0.0142 T23: 0.0365 REMARK 3 L TENSOR REMARK 3 L11: 0.1102 L22: 0.3590 REMARK 3 L33: 0.1845 L12: 0.2076 REMARK 3 L13: -0.1403 L23: -0.2727 REMARK 3 S TENSOR REMARK 3 S11: -0.1433 S12: 0.2273 S13: 0.2572 REMARK 3 S21: -0.2277 S22: -0.1148 S23: -0.1175 REMARK 3 S31: -0.0913 S32: -0.1754 S33: -0.0002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8938 4.6635 5.1073 REMARK 3 T TENSOR REMARK 3 T11: 0.6739 T22: 0.6061 REMARK 3 T33: 0.4220 T12: 0.1343 REMARK 3 T13: -0.0040 T23: 0.0526 REMARK 3 L TENSOR REMARK 3 L11: 0.9020 L22: 0.5556 REMARK 3 L33: 0.1223 L12: -0.7070 REMARK 3 L13: 0.3216 L23: -0.2544 REMARK 3 S TENSOR REMARK 3 S11: 0.4198 S12: 0.9799 S13: -0.0943 REMARK 3 S21: -1.1121 S22: -0.2333 S23: 1.0716 REMARK 3 S31: -0.0872 S32: -0.4124 S33: 0.0040 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8845 -2.1614 16.0990 REMARK 3 T TENSOR REMARK 3 T11: 0.3611 T22: 0.3550 REMARK 3 T33: 0.3574 T12: -0.0164 REMARK 3 T13: -0.0349 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.1238 L22: 0.4003 REMARK 3 L33: 0.2613 L12: -0.0664 REMARK 3 L13: -0.0812 L23: -0.2540 REMARK 3 S TENSOR REMARK 3 S11: -0.0474 S12: 0.0544 S13: 0.0148 REMARK 3 S21: -0.1229 S22: 0.0760 S23: 0.1472 REMARK 3 S31: 0.2354 S32: -0.3254 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4678 -0.3180 15.4076 REMARK 3 T TENSOR REMARK 3 T11: 0.4336 T22: 0.4004 REMARK 3 T33: 0.3731 T12: -0.0007 REMARK 3 T13: 0.0406 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 0.2551 L22: 0.1047 REMARK 3 L33: 0.2406 L12: -0.0285 REMARK 3 L13: -0.0355 L23: 0.1749 REMARK 3 S TENSOR REMARK 3 S11: -0.0496 S12: 0.5054 S13: 0.6669 REMARK 3 S21: -0.5704 S22: -0.1155 S23: -0.2697 REMARK 3 S31: -0.8525 S32: 0.2529 S33: -0.0079 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5245 -9.5943 30.9597 REMARK 3 T TENSOR REMARK 3 T11: 0.4033 T22: 0.4327 REMARK 3 T33: 0.3765 T12: 0.0129 REMARK 3 T13: 0.0168 T23: 0.1316 REMARK 3 L TENSOR REMARK 3 L11: 0.4986 L22: 2.3983 REMARK 3 L33: 0.2655 L12: 1.0884 REMARK 3 L13: -0.3783 L23: -0.8179 REMARK 3 S TENSOR REMARK 3 S11: -0.1765 S12: -0.4326 S13: -0.7748 REMARK 3 S21: 0.3582 S22: -0.0694 S23: -0.4391 REMARK 3 S31: 0.2871 S32: -0.0745 S33: 0.1541 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WG7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.832 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13570 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 55.140 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 787.0 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 430.0 REMARK 200 R MERGE FOR SHELL (I) : 1.69700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JLN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50MM SODIUM ACETATE PH 4.5, 16% PEG REMARK 280 4K, 3.5M NACL, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.25500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.99500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.99500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.88250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.99500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.99500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.62750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.99500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.99500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.88250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.99500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.99500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.62750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 19.25500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 325 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 327 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 SER A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 61 CZ REMARK 480 TRP A 62 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 315 O HOH A 340 2.05 REMARK 500 O HOH A 354 O HOH A 356 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 68 21.03 -142.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 DBREF 4WG7 A -17 129 UNP P00698 LYSC_CHICK 1 147 SEQRES 1 A 147 MET ARG SER LEU LEU ILE LEU VAL LEU CYS PHE LEU PRO SEQRES 2 A 147 LEU ALA ALA LEU GLY LYS VAL PHE GLY ARG CYS GLU LEU SEQRES 3 A 147 ALA ALA ALA MET LYS ARG HIS GLY LEU ASP ASN TYR ARG SEQRES 4 A 147 GLY TYR SER LEU GLY ASN TRP VAL CYS ALA ALA LYS PHE SEQRES 5 A 147 GLU SER ASN PHE ASN THR GLN ALA THR ASN ARG ASN THR SEQRES 6 A 147 ASP GLY SER THR ASP TYR GLY ILE LEU GLN ILE ASN SER SEQRES 7 A 147 ARG TRP TRP CYS ASN ASP GLY ARG THR PRO GLY SER ARG SEQRES 8 A 147 ASN LEU CYS ASN ILE PRO CYS SER ALA LEU LEU SER SER SEQRES 9 A 147 ASP ILE THR ALA SER VAL ASN CYS ALA LYS LYS ILE VAL SEQRES 10 A 147 SER ASP GLY ASN GLY MET ASN ALA TRP VAL ALA TRP ARG SEQRES 11 A 147 ASN ARG CYS LYS GLY THR ASP VAL GLN ALA TRP ILE ARG SEQRES 12 A 147 GLY CYS ARG LEU HET CL A 201 1 HETNAM CL CHLORIDE ION FORMUL 2 CL CL 1- FORMUL 3 HOH *57(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ILE A 124 5 6 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.02 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.02 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.04 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 SITE 1 AC1 1 GLN A 57 CRYST1 77.990 77.990 38.510 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012822 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012822 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025967 0.00000