data_4WHK # _entry.id 4WHK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4WHK WWPDB D_1000203834 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4WHH PDB . unspecified 4WHL PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4WHK _pdbx_database_status.recvd_initial_deposition_date 2014-09-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bang, J.K.' 1 'Han, Y.H.' 2 'Ahn, M.J.' 3 'Lee, K.S.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 58 _citation.language ? _citation.page_first 294 _citation.page_last 304 _citation.title 'A new class of peptidomimetics targeting the polo-box domain of polo-like kinase 1.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jm501147g _citation.pdbx_database_id_PubMed 25347203 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ahn, M.' 1 primary 'Han, Y.H.' 2 primary 'Park, J.E.' 3 primary 'Kim, S.' 4 primary 'Lee, W.C.' 5 primary 'Lee, S.J.' 6 primary 'Gunasekaran, P.' 7 primary 'Cheong, C.' 8 primary 'Shin, S.Y.' 9 primary 'Kim, H.Y.' 10 primary 'Ryu, E.K.' 11 primary 'Murugan, R.N.' 12 primary 'Kim, N.H.' 13 primary 'Bang, J.K.' 14 # _cell.length_a 37.592 _cell.length_b 39.651 _cell.length_c 39.942 _cell.angle_alpha 93.730 _cell.angle_beta 97.090 _cell.angle_gamma 102.920 _cell.entry_id 4WHK _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4WHK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine/threonine-protein kinase PLK1' 27285.158 1 2.7.11.21 ? 'UNP RESIDUES 371-603' ? 2 polymer syn 'C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR' 795.839 1 ? ? ? ? 3 water nat water 18.015 100 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Polo-like kinase 1,PLK-1,Serine/threonine-protein kinase 13,STPK13' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAHMDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; ;GAHMDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYN DGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLS NGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; A ? 2 'polypeptide(L)' no yes '(YAC)(56A)S(TPO)(NH2)' XHSTX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 HIS n 1 4 MET n 1 5 ASP n 1 6 CYS n 1 7 HIS n 1 8 LEU n 1 9 SER n 1 10 ASP n 1 11 MET n 1 12 LEU n 1 13 GLN n 1 14 GLN n 1 15 LEU n 1 16 HIS n 1 17 SER n 1 18 VAL n 1 19 ASN n 1 20 ALA n 1 21 SER n 1 22 LYS n 1 23 PRO n 1 24 SER n 1 25 GLU n 1 26 ARG n 1 27 GLY n 1 28 LEU n 1 29 VAL n 1 30 ARG n 1 31 GLN n 1 32 GLU n 1 33 GLU n 1 34 ALA n 1 35 GLU n 1 36 ASP n 1 37 PRO n 1 38 ALA n 1 39 CYS n 1 40 ILE n 1 41 PRO n 1 42 ILE n 1 43 PHE n 1 44 TRP n 1 45 VAL n 1 46 SER n 1 47 LYS n 1 48 TRP n 1 49 VAL n 1 50 ASP n 1 51 TYR n 1 52 SER n 1 53 ASP n 1 54 LYS n 1 55 TYR n 1 56 GLY n 1 57 LEU n 1 58 GLY n 1 59 TYR n 1 60 GLN n 1 61 LEU n 1 62 CYS n 1 63 ASP n 1 64 ASN n 1 65 SER n 1 66 VAL n 1 67 GLY n 1 68 VAL n 1 69 LEU n 1 70 PHE n 1 71 ASN n 1 72 ASP n 1 73 SER n 1 74 THR n 1 75 ARG n 1 76 LEU n 1 77 ILE n 1 78 LEU n 1 79 TYR n 1 80 ASN n 1 81 ASP n 1 82 GLY n 1 83 ASP n 1 84 SER n 1 85 LEU n 1 86 GLN n 1 87 TYR n 1 88 ILE n 1 89 GLU n 1 90 ARG n 1 91 ASP n 1 92 GLY n 1 93 THR n 1 94 GLU n 1 95 SER n 1 96 TYR n 1 97 LEU n 1 98 THR n 1 99 VAL n 1 100 SER n 1 101 SER n 1 102 HIS n 1 103 PRO n 1 104 ASN n 1 105 SER n 1 106 LEU n 1 107 MET n 1 108 LYS n 1 109 LYS n 1 110 ILE n 1 111 THR n 1 112 LEU n 1 113 LEU n 1 114 LYS n 1 115 TYR n 1 116 PHE n 1 117 ARG n 1 118 ASN n 1 119 TYR n 1 120 MET n 1 121 SER n 1 122 GLU n 1 123 HIS n 1 124 LEU n 1 125 LEU n 1 126 LYS n 1 127 ALA n 1 128 GLY n 1 129 ALA n 1 130 ASN n 1 131 ILE n 1 132 THR n 1 133 PRO n 1 134 ARG n 1 135 GLU n 1 136 GLY n 1 137 ASP n 1 138 GLU n 1 139 LEU n 1 140 ALA n 1 141 ARG n 1 142 LEU n 1 143 PRO n 1 144 TYR n 1 145 LEU n 1 146 ARG n 1 147 THR n 1 148 TRP n 1 149 PHE n 1 150 ARG n 1 151 THR n 1 152 ARG n 1 153 SER n 1 154 ALA n 1 155 ILE n 1 156 ILE n 1 157 LEU n 1 158 HIS n 1 159 LEU n 1 160 SER n 1 161 ASN n 1 162 GLY n 1 163 SER n 1 164 VAL n 1 165 GLN n 1 166 ILE n 1 167 ASN n 1 168 PHE n 1 169 PHE n 1 170 GLN n 1 171 ASP n 1 172 HIS n 1 173 THR n 1 174 LYS n 1 175 LEU n 1 176 ILE n 1 177 LEU n 1 178 CYS n 1 179 PRO n 1 180 LEU n 1 181 MET n 1 182 ALA n 1 183 ALA n 1 184 VAL n 1 185 THR n 1 186 TYR n 1 187 ILE n 1 188 ASP n 1 189 GLU n 1 190 LYS n 1 191 ARG n 1 192 ASP n 1 193 PHE n 1 194 ARG n 1 195 THR n 1 196 TYR n 1 197 ARG n 1 198 LEU n 1 199 SER n 1 200 LEU n 1 201 LEU n 1 202 GLU n 1 203 GLU n 1 204 TYR n 1 205 GLY n 1 206 CYS n 1 207 CYS n 1 208 LYS n 1 209 GLU n 1 210 LEU n 1 211 ALA n 1 212 SER n 1 213 ARG n 1 214 LEU n 1 215 ARG n 1 216 TYR n 1 217 ALA n 1 218 ARG n 1 219 THR n 1 220 MET n 1 221 VAL n 1 222 ASP n 1 223 LYS n 1 224 LEU n 1 225 LEU n 1 226 SER n 1 227 SER n 1 228 ARG n 1 229 SER n 1 230 ALA n 1 231 SER n 1 232 ASN n 1 233 ARG n 1 234 LEU n 1 235 LYS n 1 236 ALA n 1 237 SER n 2 1 YAC n 2 2 56A n 2 3 SER n 2 4 TPO n 2 5 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 237 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PLK1, PLK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 5 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PLK1_HUMAN P53350 ? 1 ;DCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDS LQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSV QINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS ; 371 2 PDB 4WHK 4WHK ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4WHK A 5 ? 237 ? P53350 371 ? 603 ? 371 603 2 2 4WHK B 1 ? 5 ? 4WHK 1 ? 5 ? 1 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4WHK GLY A 1 ? UNP P53350 ? ? 'expression tag' 367 1 1 4WHK ALA A 2 ? UNP P53350 ? ? 'expression tag' 368 2 1 4WHK HIS A 3 ? UNP P53350 ? ? 'expression tag' 369 3 1 4WHK MET A 4 ? UNP P53350 ? ? 'expression tag' 370 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 56A 'L-peptide linking' n '3-(8-phenyloctyl)-L-histidine' ? 'C20 H29 N3 O2' 343.463 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YAC non-polymer . '(4Z)-6-oxo-6-phenylhex-4-enoic acid' ? 'C12 H12 O3' 204.222 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4WHK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.4M K-Na tartrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-05-10 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4WHK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20085 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.400 _reflns.pdbx_Rmerge_I_obs 0.035 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI 33.300 _reflns.pdbx_netI_over_sigmaI 20.600 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 2.093 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 47511 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.800 1.830 ? ? ? ? ? 987 ? 96.000 ? ? ? ? 0.129 ? ? ? ? ? ? ? ? 2.400 ? 2.010 ? ? ? ? 0 1 1 ? ? 1.830 1.860 ? ? ? ? ? 981 ? 96.300 ? ? ? ? 0.110 ? ? ? ? ? ? ? ? 2.400 ? 2.000 ? ? ? ? 0 2 1 ? ? 1.860 1.900 ? ? ? ? ? 1004 ? 96.100 ? ? ? ? 0.103 ? ? ? ? ? ? ? ? 2.400 ? 2.160 ? ? ? ? 0 3 1 ? ? 1.900 1.940 ? ? ? ? ? 987 ? 96.200 ? ? ? ? 0.093 ? ? ? ? ? ? ? ? 2.400 ? 2.133 ? ? ? ? 0 4 1 ? ? 1.940 1.980 ? ? ? ? ? 1018 ? 96.300 ? ? ? ? 0.087 ? ? ? ? ? ? ? ? 2.400 ? 2.831 ? ? ? ? 0 5 1 ? ? 1.980 2.030 ? ? ? ? ? 980 ? 97.000 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 2.400 ? 2.523 ? ? ? ? 0 6 1 ? ? 2.030 2.080 ? ? ? ? ? 1026 ? 96.300 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 2.400 ? 2.426 ? ? ? ? 0 7 1 ? ? 2.080 2.130 ? ? ? ? ? 970 ? 97.200 ? ? ? ? 0.062 ? ? ? ? ? ? ? ? 2.400 ? 2.392 ? ? ? ? 0 8 1 ? ? 2.130 2.200 ? ? ? ? ? 1011 ? 96.800 ? ? ? ? 0.055 ? ? ? ? ? ? ? ? 2.400 ? 2.320 ? ? ? ? 0 9 1 ? ? 2.200 2.270 ? ? ? ? ? 989 ? 97.200 ? ? ? ? 0.054 ? ? ? ? ? ? ? ? 2.400 ? 2.628 ? ? ? ? 0 10 1 ? ? 2.270 2.350 ? ? ? ? ? 1056 ? 97.600 ? ? ? ? 0.053 ? ? ? ? ? ? ? ? 2.400 ? 2.389 ? ? ? ? 0 11 1 ? ? 2.350 2.440 ? ? ? ? ? 975 ? 97.100 ? ? ? ? 0.048 ? ? ? ? ? ? ? ? 2.400 ? 2.274 ? ? ? ? 0 12 1 ? ? 2.440 2.550 ? ? ? ? ? 1015 ? 98.200 ? ? ? ? 0.046 ? ? ? ? ? ? ? ? 2.400 ? 2.200 ? ? ? ? 0 13 1 ? ? 2.550 2.690 ? ? ? ? ? 1029 ? 98.000 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 2.400 ? 2.041 ? ? ? ? 0 14 1 ? ? 2.690 2.860 ? ? ? ? ? 1013 ? 98.000 ? ? ? ? 0.036 ? ? ? ? ? ? ? ? 2.400 ? 1.906 ? ? ? ? 0 15 1 ? ? 2.860 3.080 ? ? ? ? ? 1024 ? 98.300 ? ? ? ? 0.032 ? ? ? ? ? ? ? ? 2.300 ? 1.821 ? ? ? ? 0 16 1 ? ? 3.080 3.390 ? ? ? ? ? 1008 ? 98.500 ? ? ? ? 0.026 ? ? ? ? ? ? ? ? 2.400 ? 1.497 ? ? ? ? 0 17 1 ? ? 3.390 3.880 ? ? ? ? ? 1007 ? 98.500 ? ? ? ? 0.023 ? ? ? ? ? ? ? ? 2.300 ? 1.378 ? ? ? ? 0 18 1 ? ? 3.880 4.880 ? ? ? ? ? 1019 ? 97.600 ? ? ? ? 0.021 ? ? ? ? ? ? ? ? 2.300 ? 1.195 ? ? ? ? 0 19 1 ? ? 4.880 50.000 ? ? ? ? ? 986 ? 95.600 ? ? ? ? 0.025 ? ? ? ? ? ? ? ? 2.300 ? 1.641 ? ? ? ? 0 20 1 ? ? # _refine.aniso_B[1][1] 2.1600 _refine.aniso_B[1][2] 0.9700 _refine.aniso_B[1][3] -1.9000 _refine.aniso_B[2][2] -0.4600 _refine.aniso_B[2][3] -0.5800 _refine.aniso_B[3][3] -1.3100 _refine.B_iso_max 67.840 _refine.B_iso_mean 20.3920 _refine.B_iso_min 10.070 _refine.correlation_coeff_Fo_to_Fc 0.9610 _refine.correlation_coeff_Fo_to_Fc_free 0.9430 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4WHK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.8 _refine.ls_d_res_low 39.4600 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 20085 _refine.ls_number_reflns_R_free 1026 _refine.ls_number_reflns_R_work 19059 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.2800 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1610 _refine.ls_R_factor_R_free 0.1965 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1591 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.2091 _refine.ls_wR_factor_R_work 0.1681 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3HIH _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1210 _refine.pdbx_overall_ESU_R_Free 0.1160 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.2350 _refine.overall_SU_ML 0.0710 _refine.overall_SU_R_Cruickshank_DPI 0.1213 _refine.overall_SU_R_free 0.1155 _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set 0.8820 # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 39.4600 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 1924 _refine_hist.pdbx_number_residues_total 223 _refine_hist.pdbx_B_iso_mean_ligand 18.59 _refine_hist.pdbx_B_iso_mean_solvent 26.68 _refine_hist.pdbx_number_atoms_protein 1823 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 0.019 1869 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 1760 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.981 1.992 2525 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.413 3.006 4053 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.418 5.000 220 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 26.555 23.614 83 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.876 15.000 326 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.573 15.000 12 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.133 0.200 279 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.012 0.020 2061 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 438 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.841 1.826 889 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.841 1.826 888 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.627 2.730 1106 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.7920 _refine_ls_shell.d_res_low 1.8390 _refine_ls_shell.number_reflns_all 1298 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 72 _refine_ls_shell.number_reflns_R_work 1226 _refine_ls_shell.percent_reflns_obs 84.8400 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3250 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1960 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? # _struct.entry_id 4WHK _struct.title 'A New Class of Peptidomimetics Targeting the Polo-box Domain of Polo-like kinase 1' _struct.pdbx_descriptor 'Polo-like kinase, C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4WHK _struct_keywords.text 'Polo-like kinase, Inhibitor, peptide derivative, TRANSFERASE-TRANSFERASE INHIBITOR complex' _struct_keywords.pdbx_keywords 'TRANSFERASE/TRANSFERASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 7 ? SER A 21 ? HIS A 373 SER A 387 1 ? 15 HELX_P HELX_P2 AA2 ARG A 30 ? GLU A 35 ? ARG A 396 GLU A 401 5 ? 6 HELX_P HELX_P3 AA3 ASP A 36 ? ILE A 40 ? ASP A 402 ILE A 406 5 ? 5 HELX_P HELX_P4 AA4 PRO A 103 ? SER A 105 ? PRO A 469 SER A 471 5 ? 3 HELX_P HELX_P5 AA5 LEU A 106 ? LEU A 124 ? LEU A 472 LEU A 490 1 ? 19 HELX_P HELX_P6 AA6 LEU A 198 ? GLY A 205 ? LEU A 564 GLY A 571 1 ? 8 HELX_P HELX_P7 AA7 CYS A 207 ? SER A 226 ? CYS A 573 SER A 592 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? B YAC 1 C21 ? ? ? 1_555 B 56A 2 N ? ? B YAC 1 B 56A 2 1_555 ? ? ? ? ? ? ? 1.357 ? covale2 covale both ? B 56A 2 C ? ? ? 1_555 B SER 3 N ? ? B 56A 2 B SER 3 1_555 ? ? ? ? ? ? ? 1.459 ? covale3 covale both ? B SER 3 C ? ? ? 1_555 B TPO 4 N ? ? B SER 3 B TPO 4 1_555 ? ? ? ? ? ? ? 1.293 ? covale4 covale both ? B TPO 4 C ? ? ? 1_555 B NH2 5 N ? ? B TPO 4 B NH2 5 1_555 ? ? ? ? ? ? ? 1.365 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 45 ? ASP A 50 ? VAL A 411 ASP A 416 AA1 2 GLY A 56 ? LEU A 61 ? GLY A 422 LEU A 427 AA1 3 VAL A 66 ? PHE A 70 ? VAL A 432 PHE A 436 AA1 4 ARG A 75 ? LEU A 78 ? ARG A 441 LEU A 444 AA1 5 SER A 84 ? ILE A 88 ? SER A 450 ILE A 454 AA1 6 GLU A 94 ? THR A 98 ? GLU A 460 THR A 464 AA2 1 LEU A 145 ? ARG A 150 ? LEU A 511 ARG A 516 AA2 2 ALA A 154 ? LEU A 159 ? ALA A 520 LEU A 525 AA2 3 VAL A 164 ? PHE A 168 ? VAL A 530 PHE A 534 AA2 4 LYS A 174 ? CYS A 178 ? LYS A 540 CYS A 544 AA2 5 ALA A 183 ? ILE A 187 ? ALA A 549 ILE A 553 AA2 6 PHE A 193 ? ARG A 197 ? PHE A 559 ARG A 563 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 49 ? N VAL A 415 O GLY A 58 ? O GLY A 424 AA1 2 3 N LEU A 57 ? N LEU A 423 O LEU A 69 ? O LEU A 435 AA1 3 4 N VAL A 66 ? N VAL A 432 O LEU A 78 ? O LEU A 444 AA1 4 5 N ARG A 75 ? N ARG A 441 O ILE A 88 ? O ILE A 454 AA1 5 6 N LEU A 85 ? N LEU A 451 O LEU A 97 ? O LEU A 463 AA2 1 2 N PHE A 149 ? N PHE A 515 O ILE A 156 ? O ILE A 522 AA2 2 3 N LEU A 157 ? N LEU A 523 O GLN A 165 ? O GLN A 531 AA2 3 4 N VAL A 164 ? N VAL A 530 O LEU A 177 ? O LEU A 543 AA2 4 5 N LYS A 174 ? N LYS A 540 O ILE A 187 ? O ILE A 553 AA2 5 6 N VAL A 184 ? N VAL A 550 O TYR A 196 ? O TYR A 562 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 29 _struct_site.details 'BINDING SITE FOR CHAIN B OF C6H5(CH2)8-DERIVATIZED PEPTIDE INHIBITOR' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 29 ASP A 10 ? ASP A 376 . ? 1_565 ? 2 AC1 29 GLN A 13 ? GLN A 379 . ? 1_565 ? 3 AC1 29 HIS A 16 ? HIS A 382 . ? 1_565 ? 4 AC1 29 SER A 17 ? SER A 383 . ? 1_565 ? 5 AC1 29 LYS A 47 ? LYS A 413 . ? 1_555 ? 6 AC1 29 TRP A 48 ? TRP A 414 . ? 1_555 ? 7 AC1 29 VAL A 49 ? VAL A 415 . ? 1_555 ? 8 AC1 29 ASP A 50 ? ASP A 416 . ? 1_555 ? 9 AC1 29 TYR A 55 ? TYR A 421 . ? 1_555 ? 10 AC1 29 SER A 100 ? SER A 466 . ? 1_554 ? 11 AC1 29 TYR A 115 ? TYR A 481 . ? 1_555 ? 12 AC1 29 TYR A 119 ? TYR A 485 . ? 1_555 ? 13 AC1 29 LEU A 124 ? LEU A 490 . ? 1_555 ? 14 AC1 29 LEU A 125 ? LEU A 491 . ? 1_555 ? 15 AC1 29 HIS A 172 ? HIS A 538 . ? 1_555 ? 16 AC1 29 LYS A 174 ? LYS A 540 . ? 1_555 ? 17 AC1 29 GLU A 202 ? GLU A 568 . ? 1_565 ? 18 AC1 29 GLU A 203 ? GLU A 569 . ? 1_565 ? 19 AC1 29 HOH C . ? HOH A 710 . ? 1_565 ? 20 AC1 29 HOH C . ? HOH A 713 . ? 1_555 ? 21 AC1 29 HOH C . ? HOH A 716 . ? 1_565 ? 22 AC1 29 HOH D . ? HOH B 101 . ? 1_555 ? 23 AC1 29 HOH D . ? HOH B 102 . ? 1_555 ? 24 AC1 29 HOH D . ? HOH B 103 . ? 1_555 ? 25 AC1 29 HOH D . ? HOH B 104 . ? 1_555 ? 26 AC1 29 HOH D . ? HOH B 105 . ? 1_555 ? 27 AC1 29 HOH D . ? HOH B 106 . ? 1_555 ? 28 AC1 29 HOH D . ? HOH B 107 . ? 1_555 ? 29 AC1 29 HOH D . ? HOH B 108 . ? 1_555 ? # _atom_sites.entry_id 4WHK _atom_sites.fract_transf_matrix[1][1] 0.026601 _atom_sites.fract_transf_matrix[1][2] 0.006100 _atom_sites.fract_transf_matrix[1][3] 0.003908 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025875 _atom_sites.fract_transf_matrix[2][3] 0.002487 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025345 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 367 ? ? ? A . n A 1 2 ALA 2 368 ? ? ? A . n A 1 3 HIS 3 369 ? ? ? A . n A 1 4 MET 4 370 ? ? ? A . n A 1 5 ASP 5 371 ? ? ? A . n A 1 6 CYS 6 372 ? ? ? A . n A 1 7 HIS 7 373 373 HIS HIS A . n A 1 8 LEU 8 374 374 LEU LEU A . n A 1 9 SER 9 375 375 SER SER A . n A 1 10 ASP 10 376 376 ASP ASP A . n A 1 11 MET 11 377 377 MET MET A . n A 1 12 LEU 12 378 378 LEU LEU A . n A 1 13 GLN 13 379 379 GLN GLN A . n A 1 14 GLN 14 380 380 GLN GLN A . n A 1 15 LEU 15 381 381 LEU LEU A . n A 1 16 HIS 16 382 382 HIS HIS A . n A 1 17 SER 17 383 383 SER SER A . n A 1 18 VAL 18 384 384 VAL VAL A . n A 1 19 ASN 19 385 385 ASN ASN A . n A 1 20 ALA 20 386 386 ALA ALA A . n A 1 21 SER 21 387 387 SER SER A . n A 1 22 LYS 22 388 388 LYS LYS A . n A 1 23 PRO 23 389 389 PRO PRO A . n A 1 24 SER 24 390 390 SER SER A . n A 1 25 GLU 25 391 391 GLU GLU A . n A 1 26 ARG 26 392 392 ARG ARG A . n A 1 27 GLY 27 393 393 GLY GLY A . n A 1 28 LEU 28 394 394 LEU LEU A . n A 1 29 VAL 29 395 395 VAL VAL A . n A 1 30 ARG 30 396 396 ARG ARG A . n A 1 31 GLN 31 397 397 GLN GLN A . n A 1 32 GLU 32 398 398 GLU GLU A . n A 1 33 GLU 33 399 399 GLU GLU A . n A 1 34 ALA 34 400 400 ALA ALA A . n A 1 35 GLU 35 401 401 GLU GLU A . n A 1 36 ASP 36 402 402 ASP ASP A . n A 1 37 PRO 37 403 403 PRO PRO A . n A 1 38 ALA 38 404 404 ALA ALA A . n A 1 39 CYS 39 405 405 CYS CYS A . n A 1 40 ILE 40 406 406 ILE ILE A . n A 1 41 PRO 41 407 407 PRO PRO A . n A 1 42 ILE 42 408 408 ILE ILE A . n A 1 43 PHE 43 409 409 PHE PHE A . n A 1 44 TRP 44 410 410 TRP TRP A . n A 1 45 VAL 45 411 411 VAL VAL A . n A 1 46 SER 46 412 412 SER SER A . n A 1 47 LYS 47 413 413 LYS LYS A . n A 1 48 TRP 48 414 414 TRP TRP A . n A 1 49 VAL 49 415 415 VAL VAL A . n A 1 50 ASP 50 416 416 ASP ASP A . n A 1 51 TYR 51 417 417 TYR TYR A . n A 1 52 SER 52 418 418 SER SER A . n A 1 53 ASP 53 419 419 ASP ASP A . n A 1 54 LYS 54 420 420 LYS LYS A . n A 1 55 TYR 55 421 421 TYR TYR A . n A 1 56 GLY 56 422 422 GLY GLY A . n A 1 57 LEU 57 423 423 LEU LEU A . n A 1 58 GLY 58 424 424 GLY GLY A . n A 1 59 TYR 59 425 425 TYR TYR A . n A 1 60 GLN 60 426 426 GLN GLN A . n A 1 61 LEU 61 427 427 LEU LEU A . n A 1 62 CYS 62 428 428 CYS CYS A . n A 1 63 ASP 63 429 429 ASP ASP A . n A 1 64 ASN 64 430 430 ASN ASN A . n A 1 65 SER 65 431 431 SER SER A . n A 1 66 VAL 66 432 432 VAL VAL A . n A 1 67 GLY 67 433 433 GLY GLY A . n A 1 68 VAL 68 434 434 VAL VAL A . n A 1 69 LEU 69 435 435 LEU LEU A . n A 1 70 PHE 70 436 436 PHE PHE A . n A 1 71 ASN 71 437 437 ASN ASN A . n A 1 72 ASP 72 438 438 ASP ASP A . n A 1 73 SER 73 439 439 SER SER A . n A 1 74 THR 74 440 440 THR THR A . n A 1 75 ARG 75 441 441 ARG ARG A . n A 1 76 LEU 76 442 442 LEU LEU A . n A 1 77 ILE 77 443 443 ILE ILE A . n A 1 78 LEU 78 444 444 LEU LEU A . n A 1 79 TYR 79 445 445 TYR TYR A . n A 1 80 ASN 80 446 446 ASN ASN A . n A 1 81 ASP 81 447 447 ASP ASP A . n A 1 82 GLY 82 448 448 GLY GLY A . n A 1 83 ASP 83 449 449 ASP ASP A . n A 1 84 SER 84 450 450 SER SER A . n A 1 85 LEU 85 451 451 LEU LEU A . n A 1 86 GLN 86 452 452 GLN GLN A . n A 1 87 TYR 87 453 453 TYR TYR A . n A 1 88 ILE 88 454 454 ILE ILE A . n A 1 89 GLU 89 455 455 GLU GLU A . n A 1 90 ARG 90 456 456 ARG ARG A . n A 1 91 ASP 91 457 457 ASP ASP A . n A 1 92 GLY 92 458 458 GLY GLY A . n A 1 93 THR 93 459 459 THR THR A . n A 1 94 GLU 94 460 460 GLU GLU A . n A 1 95 SER 95 461 461 SER SER A . n A 1 96 TYR 96 462 462 TYR TYR A . n A 1 97 LEU 97 463 463 LEU LEU A . n A 1 98 THR 98 464 464 THR THR A . n A 1 99 VAL 99 465 465 VAL VAL A . n A 1 100 SER 100 466 466 SER SER A . n A 1 101 SER 101 467 467 SER SER A . n A 1 102 HIS 102 468 468 HIS HIS A . n A 1 103 PRO 103 469 469 PRO PRO A . n A 1 104 ASN 104 470 470 ASN ASN A . n A 1 105 SER 105 471 471 SER SER A . n A 1 106 LEU 106 472 472 LEU LEU A . n A 1 107 MET 107 473 473 MET MET A . n A 1 108 LYS 108 474 474 LYS LYS A . n A 1 109 LYS 109 475 475 LYS LYS A . n A 1 110 ILE 110 476 476 ILE ILE A . n A 1 111 THR 111 477 477 THR THR A . n A 1 112 LEU 112 478 478 LEU LEU A . n A 1 113 LEU 113 479 479 LEU LEU A . n A 1 114 LYS 114 480 480 LYS LYS A . n A 1 115 TYR 115 481 481 TYR TYR A . n A 1 116 PHE 116 482 482 PHE PHE A . n A 1 117 ARG 117 483 483 ARG ARG A . n A 1 118 ASN 118 484 484 ASN ASN A . n A 1 119 TYR 119 485 485 TYR TYR A . n A 1 120 MET 120 486 486 MET MET A . n A 1 121 SER 121 487 487 SER SER A . n A 1 122 GLU 122 488 488 GLU GLU A . n A 1 123 HIS 123 489 489 HIS HIS A . n A 1 124 LEU 124 490 490 LEU LEU A . n A 1 125 LEU 125 491 491 LEU LEU A . n A 1 126 LYS 126 492 492 LYS LYS A . n A 1 127 ALA 127 493 493 ALA ALA A . n A 1 128 GLY 128 494 494 GLY GLY A . n A 1 129 ALA 129 495 495 ALA ALA A . n A 1 130 ASN 130 496 496 ASN ASN A . n A 1 131 ILE 131 497 497 ILE ILE A . n A 1 132 THR 132 498 498 THR THR A . n A 1 133 PRO 133 499 499 PRO PRO A . n A 1 134 ARG 134 500 500 ARG ARG A . n A 1 135 GLU 135 501 501 GLU GLU A . n A 1 136 GLY 136 502 502 GLY GLY A . n A 1 137 ASP 137 503 503 ASP ASP A . n A 1 138 GLU 138 504 504 GLU GLU A . n A 1 139 LEU 139 505 505 LEU LEU A . n A 1 140 ALA 140 506 506 ALA ALA A . n A 1 141 ARG 141 507 507 ARG ARG A . n A 1 142 LEU 142 508 508 LEU LEU A . n A 1 143 PRO 143 509 509 PRO PRO A . n A 1 144 TYR 144 510 510 TYR TYR A . n A 1 145 LEU 145 511 511 LEU LEU A . n A 1 146 ARG 146 512 512 ARG ARG A . n A 1 147 THR 147 513 513 THR THR A . n A 1 148 TRP 148 514 514 TRP TRP A . n A 1 149 PHE 149 515 515 PHE PHE A . n A 1 150 ARG 150 516 516 ARG ARG A . n A 1 151 THR 151 517 517 THR THR A . n A 1 152 ARG 152 518 518 ARG ARG A . n A 1 153 SER 153 519 519 SER SER A . n A 1 154 ALA 154 520 520 ALA ALA A . n A 1 155 ILE 155 521 521 ILE ILE A . n A 1 156 ILE 156 522 522 ILE ILE A . n A 1 157 LEU 157 523 523 LEU LEU A . n A 1 158 HIS 158 524 524 HIS HIS A . n A 1 159 LEU 159 525 525 LEU LEU A . n A 1 160 SER 160 526 526 SER SER A . n A 1 161 ASN 161 527 527 ASN ASN A . n A 1 162 GLY 162 528 528 GLY GLY A . n A 1 163 SER 163 529 529 SER SER A . n A 1 164 VAL 164 530 530 VAL VAL A . n A 1 165 GLN 165 531 531 GLN GLN A . n A 1 166 ILE 166 532 532 ILE ILE A . n A 1 167 ASN 167 533 533 ASN ASN A . n A 1 168 PHE 168 534 534 PHE PHE A . n A 1 169 PHE 169 535 535 PHE PHE A . n A 1 170 GLN 170 536 536 GLN GLN A . n A 1 171 ASP 171 537 537 ASP ASP A . n A 1 172 HIS 172 538 538 HIS HIS A . n A 1 173 THR 173 539 539 THR THR A . n A 1 174 LYS 174 540 540 LYS LYS A . n A 1 175 LEU 175 541 541 LEU LEU A . n A 1 176 ILE 176 542 542 ILE ILE A . n A 1 177 LEU 177 543 543 LEU LEU A . n A 1 178 CYS 178 544 544 CYS CYS A . n A 1 179 PRO 179 545 545 PRO PRO A . n A 1 180 LEU 180 546 546 LEU LEU A . n A 1 181 MET 181 547 547 MET MET A . n A 1 182 ALA 182 548 548 ALA ALA A . n A 1 183 ALA 183 549 549 ALA ALA A . n A 1 184 VAL 184 550 550 VAL VAL A . n A 1 185 THR 185 551 551 THR THR A . n A 1 186 TYR 186 552 552 TYR TYR A . n A 1 187 ILE 187 553 553 ILE ILE A . n A 1 188 ASP 188 554 554 ASP ASP A . n A 1 189 GLU 189 555 555 GLU GLU A . n A 1 190 LYS 190 556 556 LYS LYS A . n A 1 191 ARG 191 557 557 ARG ARG A . n A 1 192 ASP 192 558 558 ASP ASP A . n A 1 193 PHE 193 559 559 PHE PHE A . n A 1 194 ARG 194 560 560 ARG ARG A . n A 1 195 THR 195 561 561 THR THR A . n A 1 196 TYR 196 562 562 TYR TYR A . n A 1 197 ARG 197 563 563 ARG ARG A . n A 1 198 LEU 198 564 564 LEU LEU A . n A 1 199 SER 199 565 565 SER SER A . n A 1 200 LEU 200 566 566 LEU LEU A . n A 1 201 LEU 201 567 567 LEU LEU A . n A 1 202 GLU 202 568 568 GLU GLU A . n A 1 203 GLU 203 569 569 GLU GLU A . n A 1 204 TYR 204 570 570 TYR TYR A . n A 1 205 GLY 205 571 571 GLY GLY A . n A 1 206 CYS 206 572 572 CYS CYS A . n A 1 207 CYS 207 573 573 CYS CYS A . n A 1 208 LYS 208 574 574 LYS LYS A . n A 1 209 GLU 209 575 575 GLU GLU A . n A 1 210 LEU 210 576 576 LEU LEU A . n A 1 211 ALA 211 577 577 ALA ALA A . n A 1 212 SER 212 578 578 SER SER A . n A 1 213 ARG 213 579 579 ARG ARG A . n A 1 214 LEU 214 580 580 LEU LEU A . n A 1 215 ARG 215 581 581 ARG ARG A . n A 1 216 TYR 216 582 582 TYR TYR A . n A 1 217 ALA 217 583 583 ALA ALA A . n A 1 218 ARG 218 584 584 ARG ARG A . n A 1 219 THR 219 585 585 THR THR A . n A 1 220 MET 220 586 586 MET MET A . n A 1 221 VAL 221 587 587 VAL VAL A . n A 1 222 ASP 222 588 588 ASP ASP A . n A 1 223 LYS 223 589 589 LYS LYS A . n A 1 224 LEU 224 590 590 LEU LEU A . n A 1 225 LEU 225 591 591 LEU LEU A . n A 1 226 SER 226 592 592 SER SER A . n A 1 227 SER 227 593 ? ? ? A . n A 1 228 ARG 228 594 ? ? ? A . n A 1 229 SER 229 595 ? ? ? A . n A 1 230 ALA 230 596 ? ? ? A . n A 1 231 SER 231 597 ? ? ? A . n A 1 232 ASN 232 598 ? ? ? A . n A 1 233 ARG 233 599 ? ? ? A . n A 1 234 LEU 234 600 ? ? ? A . n A 1 235 LYS 235 601 ? ? ? A . n A 1 236 ALA 236 602 ? ? ? A . n A 1 237 SER 237 603 ? ? ? A . n B 2 1 YAC 1 1 1 YAC H02 B . n B 2 2 56A 2 2 1 56A H02 B . n B 2 3 SER 3 3 2 SER SER B . n B 2 4 TPO 4 4 3 TPO TPO B . n B 2 5 NH2 5 5 4 NH2 NH2 B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 701 32 HOH HOH A . C 3 HOH 2 702 54 HOH HOH A . C 3 HOH 3 703 40 HOH HOH A . C 3 HOH 4 704 82 HOH HOH A . C 3 HOH 5 705 5 HOH HOH A . C 3 HOH 6 706 69 HOH HOH A . C 3 HOH 7 707 19 HOH HOH A . C 3 HOH 8 708 1 HOH HOH A . C 3 HOH 9 709 71 HOH HOH A . C 3 HOH 10 710 25 HOH HOH A . C 3 HOH 11 711 80 HOH HOH A . C 3 HOH 12 712 23 HOH HOH A . C 3 HOH 13 713 38 HOH HOH A . C 3 HOH 14 714 59 HOH HOH A . C 3 HOH 15 715 75 HOH HOH A . C 3 HOH 16 716 14 HOH HOH A . C 3 HOH 17 717 6 HOH HOH A . C 3 HOH 18 718 41 HOH HOH A . C 3 HOH 19 719 98 HOH HOH A . C 3 HOH 20 720 18 HOH HOH A . C 3 HOH 21 721 52 HOH HOH A . C 3 HOH 22 722 90 HOH HOH A . C 3 HOH 23 723 68 HOH HOH A . C 3 HOH 24 724 95 HOH HOH A . C 3 HOH 25 725 56 HOH HOH A . C 3 HOH 26 726 88 HOH HOH A . C 3 HOH 27 727 60 HOH HOH A . C 3 HOH 28 728 64 HOH HOH A . C 3 HOH 29 729 73 HOH HOH A . C 3 HOH 30 730 51 HOH HOH A . C 3 HOH 31 731 91 HOH HOH A . C 3 HOH 32 732 81 HOH HOH A . C 3 HOH 33 733 70 HOH HOH A . C 3 HOH 34 734 89 HOH HOH A . C 3 HOH 35 735 7 HOH HOH A . C 3 HOH 36 736 8 HOH HOH A . C 3 HOH 37 737 9 HOH HOH A . C 3 HOH 38 738 10 HOH HOH A . C 3 HOH 39 739 12 HOH HOH A . C 3 HOH 40 740 13 HOH HOH A . C 3 HOH 41 741 15 HOH HOH A . C 3 HOH 42 742 16 HOH HOH A . C 3 HOH 43 743 17 HOH HOH A . C 3 HOH 44 744 20 HOH HOH A . C 3 HOH 45 745 21 HOH HOH A . C 3 HOH 46 746 22 HOH HOH A . C 3 HOH 47 747 26 HOH HOH A . C 3 HOH 48 748 27 HOH HOH A . C 3 HOH 49 749 28 HOH HOH A . C 3 HOH 50 750 29 HOH HOH A . C 3 HOH 51 751 30 HOH HOH A . C 3 HOH 52 752 31 HOH HOH A . C 3 HOH 53 753 33 HOH HOH A . C 3 HOH 54 754 34 HOH HOH A . C 3 HOH 55 755 35 HOH HOH A . C 3 HOH 56 756 36 HOH HOH A . C 3 HOH 57 757 37 HOH HOH A . C 3 HOH 58 758 42 HOH HOH A . C 3 HOH 59 759 43 HOH HOH A . C 3 HOH 60 760 44 HOH HOH A . C 3 HOH 61 761 45 HOH HOH A . C 3 HOH 62 762 46 HOH HOH A . C 3 HOH 63 763 47 HOH HOH A . C 3 HOH 64 764 48 HOH HOH A . C 3 HOH 65 765 49 HOH HOH A . C 3 HOH 66 766 50 HOH HOH A . C 3 HOH 67 767 53 HOH HOH A . C 3 HOH 68 768 55 HOH HOH A . C 3 HOH 69 769 57 HOH HOH A . C 3 HOH 70 770 58 HOH HOH A . C 3 HOH 71 771 61 HOH HOH A . C 3 HOH 72 772 62 HOH HOH A . C 3 HOH 73 773 65 HOH HOH A . C 3 HOH 74 774 66 HOH HOH A . C 3 HOH 75 775 67 HOH HOH A . C 3 HOH 76 776 72 HOH HOH A . C 3 HOH 77 777 74 HOH HOH A . C 3 HOH 78 778 77 HOH HOH A . C 3 HOH 79 779 78 HOH HOH A . C 3 HOH 80 780 79 HOH HOH A . C 3 HOH 81 781 83 HOH HOH A . C 3 HOH 82 782 84 HOH HOH A . C 3 HOH 83 783 85 HOH HOH A . C 3 HOH 84 784 86 HOH HOH A . C 3 HOH 85 785 87 HOH HOH A . C 3 HOH 86 786 92 HOH HOH A . C 3 HOH 87 787 93 HOH HOH A . C 3 HOH 88 788 94 HOH HOH A . C 3 HOH 89 789 96 HOH HOH A . C 3 HOH 90 790 97 HOH HOH A . C 3 HOH 91 791 99 HOH HOH A . C 3 HOH 92 792 100 HOH HOH A . D 3 HOH 1 101 63 HOH HOH B . D 3 HOH 2 102 76 HOH HOH B . D 3 HOH 3 103 2 HOH HOH B . D 3 HOH 4 104 3 HOH HOH B . D 3 HOH 5 105 4 HOH HOH B . D 3 HOH 6 106 11 HOH HOH B . D 3 HOH 7 107 24 HOH HOH B . D 3 HOH 8 108 39 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_002118 _pdbx_molecule_features.name 'C6H5(CH2)8-derivatized peptide inhibitor' _pdbx_molecule_features.type Polypeptide _pdbx_molecule_features.class 'Enzyme inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_002118 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1190 ? 1 MORE -7 ? 1 'SSA (A^2)' 11010 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-03 2 'Structure model' 1 1 2015-01-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? ADSC ? ? ? 2.5.1 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 5 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 6 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL ? ? ? . 7 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL ? ? ? . 8 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 720 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 731 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_545 _pdbx_validate_symm_contact.dist 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 376 ? ? CG A ASP 376 ? ? OD1 A ASP 376 ? ? 124.15 118.30 5.85 0.90 N 2 1 CB A CYS 573 ? A CA A CYS 573 ? ? C A CYS 573 ? ? 119.55 111.50 8.05 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 430 ? ? 81.65 -5.09 2 1 ASP A 449 ? ? -136.36 -35.90 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id 56A _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 2 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -15.77 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 396 ? CZ ? A ARG 30 CZ 2 1 Y 1 A ARG 396 ? NH1 ? A ARG 30 NH1 3 1 Y 1 A ARG 396 ? NH2 ? A ARG 30 NH2 4 1 Y 1 A ARG 456 ? CZ ? A ARG 90 CZ 5 1 Y 1 A ARG 456 ? NH1 ? A ARG 90 NH1 6 1 Y 1 A ARG 456 ? NH2 ? A ARG 90 NH2 7 1 Y 1 A GLU 501 ? CG ? A GLU 135 CG 8 1 Y 1 A GLU 501 ? CD ? A GLU 135 CD 9 1 Y 1 A GLU 501 ? OE1 ? A GLU 135 OE1 10 1 Y 1 A GLU 501 ? OE2 ? A GLU 135 OE2 11 1 Y 1 A ARG 507 ? CD ? A ARG 141 CD 12 1 Y 1 A ARG 507 ? NE ? A ARG 141 NE 13 1 Y 1 A ARG 507 ? CZ ? A ARG 141 CZ 14 1 Y 1 A ARG 507 ? NH1 ? A ARG 141 NH1 15 1 Y 1 A ARG 507 ? NH2 ? A ARG 141 NH2 16 1 Y 1 A ARG 512 ? NE ? A ARG 146 NE 17 1 Y 1 A ARG 512 ? CZ ? A ARG 146 CZ 18 1 Y 1 A ARG 512 ? NH1 ? A ARG 146 NH1 19 1 Y 1 A ARG 512 ? NH2 ? A ARG 146 NH2 20 1 Y 1 A LYS 556 ? CE ? A LYS 190 CE 21 1 Y 1 A LYS 556 ? NZ ? A LYS 190 NZ 22 1 Y 1 A LYS 574 ? CD ? A LYS 208 CD 23 1 Y 1 A LYS 574 ? CE ? A LYS 208 CE 24 1 Y 1 A LYS 574 ? NZ ? A LYS 208 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 367 ? A GLY 1 2 1 Y 1 A ALA 368 ? A ALA 2 3 1 Y 1 A HIS 369 ? A HIS 3 4 1 Y 1 A MET 370 ? A MET 4 5 1 Y 1 A ASP 371 ? A ASP 5 6 1 Y 1 A CYS 372 ? A CYS 6 7 1 Y 1 A SER 593 ? A SER 227 8 1 Y 1 A ARG 594 ? A ARG 228 9 1 Y 1 A SER 595 ? A SER 229 10 1 Y 1 A ALA 596 ? A ALA 230 11 1 Y 1 A SER 597 ? A SER 231 12 1 Y 1 A ASN 598 ? A ASN 232 13 1 Y 1 A ARG 599 ? A ARG 233 14 1 Y 1 A LEU 600 ? A LEU 234 15 1 Y 1 A LYS 601 ? A LYS 235 16 1 Y 1 A ALA 602 ? A ALA 236 17 1 Y 1 A SER 603 ? A SER 237 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Korea Basic Science Institute' 'Korea, Republic Of' T34418 1 'Rural Development Administration' 'Korea, Republic Of' PJ009594 2 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #