HEADER IMMUNE SYSTEM 25-SEP-14 4WI6 TITLE STRUCTURAL MAPPING OF THE HUMAN IGG1 BINDING SITE FOR FCRN: HU3S193 FC TITLE 2 MUTATION N434A COMPND MOL_ID: 1; COMPND 2 MOLECULE: IG GAMMA-1 CHAIN C REGION; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 120-327; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHG1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: 293F KEYWDS HUMAN IGG1, FCRN BINDING SITE, THERAPEUTIC ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR W.FARRUGIA,I.J.G.BURVENICH,A.M.SCOTT,P.A.RAMSLAND REVDAT 5 27-DEC-23 4WI6 1 HETSYN LINK REVDAT 4 29-JUL-20 4WI6 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 08-JAN-20 4WI6 1 REMARK REVDAT 2 13-SEP-17 4WI6 1 REMARK REVDAT 1 30-SEP-15 4WI6 0 JRNL AUTH I.J.G.BURVENICH,W.FARRUGIA,F.T.LEE,B.CATIMEL,Z.LIU,D.MAKRIS, JRNL AUTH 2 D.CAO,G.O'KEEFE,M.W.BRECHBIEL,D.KING,V.SPIRKOSKA,L.ALLAN, JRNL AUTH 3 P.A.RAMSLAND,A.M.SCOTT JRNL TITL STRUCTURAL AND FUNCTIONAL MAPPING OF HUMAN IGG1 BINDING SITE JRNL TITL 2 FOR FCRN IN VIVO USING HUMAN FCRN TRANSGENIC MICE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 27757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.291 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 5.2945 0.99 2011 155 0.2152 0.2656 REMARK 3 2 5.2945 - 4.2062 0.99 1903 147 0.1719 0.2356 REMARK 3 3 4.2062 - 3.6756 0.98 1881 147 0.2038 0.2745 REMARK 3 4 3.6756 - 3.3400 0.99 1848 143 0.2275 0.2755 REMARK 3 5 3.3400 - 3.1009 0.99 1837 142 0.2370 0.3048 REMARK 3 6 3.1009 - 2.9182 0.99 1839 142 0.2485 0.3388 REMARK 3 7 2.9182 - 2.7722 0.99 1844 144 0.2532 0.3493 REMARK 3 8 2.7722 - 2.6516 0.98 1830 142 0.2310 0.2936 REMARK 3 9 2.6516 - 2.5496 0.98 1820 141 0.2415 0.2967 REMARK 3 10 2.5496 - 2.4616 0.98 1777 138 0.2346 0.3182 REMARK 3 11 2.4616 - 2.3847 0.98 1828 142 0.2441 0.3052 REMARK 3 12 2.3847 - 2.3165 0.98 1798 140 0.2699 0.3481 REMARK 3 13 2.3165 - 2.2556 0.98 1790 139 0.2873 0.3702 REMARK 3 14 2.2556 - 2.2006 0.94 1753 136 0.3347 0.4177 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 29.81 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.11500 REMARK 3 B22 (A**2) : -1.89820 REMARK 3 B33 (A**2) : 12.01330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3638 REMARK 3 ANGLE : 1.386 4972 REMARK 3 CHIRALITY : 0.078 592 REMARK 3 PLANARITY : 0.011 606 REMARK 3 DIHEDRAL : 27.994 1436 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 237:251) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2895 -16.0919 19.7995 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.3313 REMARK 3 T33: 0.2390 T12: 0.0047 REMARK 3 T13: 0.0371 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 1.3859 L22: 3.3855 REMARK 3 L33: 7.7231 L12: 0.4370 REMARK 3 L13: -0.0010 L23: 0.1582 REMARK 3 S TENSOR REMARK 3 S11: 0.0907 S12: 0.7311 S13: -0.1805 REMARK 3 S21: -0.1647 S22: 0.1751 S23: 0.3263 REMARK 3 S31: -0.5750 S32: -0.5887 S33: -0.2291 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 252:264) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2645 -21.1489 22.5183 REMARK 3 T TENSOR REMARK 3 T11: 0.2411 T22: 0.2195 REMARK 3 T33: 0.2745 T12: 0.0256 REMARK 3 T13: 0.0376 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 5.7862 L22: 2.8948 REMARK 3 L33: 6.3442 L12: -0.8676 REMARK 3 L13: 2.9019 L23: -1.9197 REMARK 3 S TENSOR REMARK 3 S11: 0.1173 S12: 0.3558 S13: -0.3957 REMARK 3 S21: -0.0987 S22: -0.1866 S23: -0.0789 REMARK 3 S31: 0.3729 S32: -0.0602 S33: 0.0513 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 265:279) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1226 -22.5670 3.7400 REMARK 3 T TENSOR REMARK 3 T11: 0.4449 T22: 0.8795 REMARK 3 T33: 0.1944 T12: -0.0288 REMARK 3 T13: -0.1276 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 2.2139 L22: 0.1783 REMARK 3 L33: 0.8762 L12: -0.2998 REMARK 3 L13: 1.3961 L23: -0.1957 REMARK 3 S TENSOR REMARK 3 S11: -0.5840 S12: 1.2827 S13: -0.0833 REMARK 3 S21: -0.4572 S22: 0.2840 S23: 0.2203 REMARK 3 S31: 0.0550 S32: -0.0721 S33: 0.1425 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 280:301) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3134 -25.2462 9.9191 REMARK 3 T TENSOR REMARK 3 T11: 0.3569 T22: 0.7130 REMARK 3 T33: 0.3031 T12: -0.0311 REMARK 3 T13: 0.0013 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 6.4389 L22: 2.0571 REMARK 3 L33: 0.9879 L12: 0.1044 REMARK 3 L13: 0.5659 L23: 0.3938 REMARK 3 S TENSOR REMARK 3 S11: 0.2092 S12: 1.2541 S13: -0.7511 REMARK 3 S21: 0.0366 S22: 0.0094 S23: 0.4839 REMARK 3 S31: 0.4032 S32: -0.3319 S33: -0.2237 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 302:325) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7209 -17.2442 17.0875 REMARK 3 T TENSOR REMARK 3 T11: 0.2440 T22: 0.4319 REMARK 3 T33: 0.1661 T12: -0.0558 REMARK 3 T13: -0.0650 T23: 0.1004 REMARK 3 L TENSOR REMARK 3 L11: 1.1292 L22: 2.3914 REMARK 3 L33: 3.5477 L12: 0.4039 REMARK 3 L13: 0.8338 L23: 1.4832 REMARK 3 S TENSOR REMARK 3 S11: 0.0670 S12: 0.7297 S13: -0.0229 REMARK 3 S21: 0.0354 S22: -0.0553 S23: 0.0648 REMARK 3 S31: -0.1389 S32: 0.2318 S33: -0.0229 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 326:346) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2277 -9.0169 16.1297 REMARK 3 T TENSOR REMARK 3 T11: 0.3945 T22: 0.3601 REMARK 3 T33: 0.4049 T12: -0.0981 REMARK 3 T13: -0.0186 T23: 0.1738 REMARK 3 L TENSOR REMARK 3 L11: 2.5709 L22: 2.8340 REMARK 3 L33: 4.3787 L12: 0.4469 REMARK 3 L13: 1.0121 L23: 3.4313 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: 0.6681 S13: 0.4178 REMARK 3 S21: -0.5177 S22: 0.3898 S23: 0.0398 REMARK 3 S31: -0.5746 S32: 0.3273 S33: -0.3724 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 347:361) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1632 -5.4475 49.5166 REMARK 3 T TENSOR REMARK 3 T11: 0.2832 T22: 0.3172 REMARK 3 T33: 0.2716 T12: 0.0666 REMARK 3 T13: 0.0007 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 2.6662 L22: 3.9618 REMARK 3 L33: 4.9037 L12: 2.3581 REMARK 3 L13: -2.2869 L23: -0.3540 REMARK 3 S TENSOR REMARK 3 S11: 0.3805 S12: -0.9456 S13: 0.4163 REMARK 3 S21: 0.5891 S22: -0.1967 S23: 0.2345 REMARK 3 S31: -0.4873 S32: -0.2703 S33: -0.2660 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 362:432) REMARK 3 ORIGIN FOR THE GROUP (A): 4.5473 -10.3151 41.1644 REMARK 3 T TENSOR REMARK 3 T11: 0.1561 T22: 0.1101 REMARK 3 T33: 0.2167 T12: 0.0073 REMARK 3 T13: -0.0517 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.9892 L22: 2.5659 REMARK 3 L33: 2.0331 L12: 0.5961 REMARK 3 L13: -0.4608 L23: 0.3728 REMARK 3 S TENSOR REMARK 3 S11: -0.2069 S12: -0.2187 S13: -0.6065 REMARK 3 S21: -0.0973 S22: 0.0407 S23: -0.3785 REMARK 3 S31: 0.1970 S32: -0.0432 S33: 0.1015 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 433:444) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3321 -12.0125 47.3381 REMARK 3 T TENSOR REMARK 3 T11: 0.2211 T22: 0.5522 REMARK 3 T33: 0.3829 T12: 0.0413 REMARK 3 T13: -0.0531 T23: 0.2017 REMARK 3 L TENSOR REMARK 3 L11: 5.4904 L22: 2.4676 REMARK 3 L33: 7.4861 L12: -1.5676 REMARK 3 L13: -6.3584 L23: 2.0616 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: -0.9513 S13: -0.2145 REMARK 3 S21: 0.1612 S22: 0.0079 S23: -0.2934 REMARK 3 S31: 0.4830 S32: 0.6133 S33: -0.0749 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 237:336) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5655 11.8511 10.4191 REMARK 3 T TENSOR REMARK 3 T11: 0.5012 T22: 0.7737 REMARK 3 T33: 0.5191 T12: -0.2947 REMARK 3 T13: -0.1671 T23: 0.5288 REMARK 3 L TENSOR REMARK 3 L11: 1.0208 L22: 1.4057 REMARK 3 L33: 0.0492 L12: -0.3620 REMARK 3 L13: -0.0757 L23: 0.2413 REMARK 3 S TENSOR REMARK 3 S11: -0.1618 S12: 1.0113 S13: 0.5787 REMARK 3 S21: -0.6732 S22: -0.0348 S23: -0.1775 REMARK 3 S31: -0.3727 S32: 0.3729 S33: -0.3504 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 337:444) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3144 3.9615 40.7718 REMARK 3 T TENSOR REMARK 3 T11: 0.1346 T22: 0.1025 REMARK 3 T33: 0.1854 T12: 0.0015 REMARK 3 T13: 0.0441 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 2.1835 L22: 3.6983 REMARK 3 L33: 1.7249 L12: -0.2887 REMARK 3 L13: -0.1089 L23: 0.2005 REMARK 3 S TENSOR REMARK 3 S11: -0.0076 S12: -0.2485 S13: 0.4456 REMARK 3 S21: 0.0540 S22: -0.0092 S23: 0.2046 REMARK 3 S31: -0.0658 S32: 0.0442 S33: -0.0017 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WI6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27786 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, 0.1 M MES, 25% V/V ETHYLENE REMARK 280 GLYCOL, PH 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.58950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.34550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.47600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.34550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.58950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.47600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 58.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 601 O HOH A 622 2.09 REMARK 500 OG SER A 400 O HOH A 601 2.12 REMARK 500 O HOH B 648 O HOH B 649 2.12 REMARK 500 OE2 GLU A 380 O HOH A 602 2.13 REMARK 500 OD2 ASP A 399 O HOH A 601 2.15 REMARK 500 O HOH B 602 O HOH B 657 2.17 REMARK 500 O HOH B 627 O HOH B 656 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 374 C - N - CA ANGL. DEV. = 19.3 DEGREES REMARK 500 PRO A 374 C - N - CD ANGL. DEV. = -34.8 DEGREES REMARK 500 LEU A 406 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 PRO B 374 C - N - CA ANGL. DEV. = 12.1 DEGREES REMARK 500 PRO B 374 C - N - CD ANGL. DEV. = -29.1 DEGREES REMARK 500 LEU B 406 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 374 132.89 34.65 REMARK 500 ASN A 389 -77.94 -64.15 REMARK 500 LEU A 398 108.38 -57.49 REMARK 500 ALA A 434 20.85 46.49 REMARK 500 GLN B 295 -146.08 -86.28 REMARK 500 SER B 298 -16.89 76.48 REMARK 500 PRO B 374 126.00 39.86 REMARK 500 LYS B 414 -38.86 -39.87 REMARK 500 ALA B 434 10.98 47.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR A 373 PRO A 374 -98.70 REMARK 500 TYR B 373 PRO B 374 -106.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WI2 RELATED DB: PDB REMARK 900 RELATED ID: 4WI3 RELATED DB: PDB REMARK 900 RELATED ID: 4WI4 RELATED DB: PDB REMARK 900 RELATED ID: 4WI7 RELATED DB: PDB REMARK 900 RELATED ID: 4WI8 RELATED DB: PDB REMARK 900 RELATED ID: 4WI9 RELATED DB: PDB DBREF 4WI6 A 237 444 UNP P01857 IGHG1_HUMAN 120 327 DBREF 4WI6 B 237 444 UNP P01857 IGHG1_HUMAN 120 327 SEQADV 4WI6 ALA A 434 UNP P01857 ASN 317 ENGINEERED MUTATION SEQADV 4WI6 ALA B 434 UNP P01857 ASN 317 ENGINEERED MUTATION SEQRES 1 A 208 GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS ASP SEQRES 2 A 208 THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS VAL SEQRES 3 A 208 VAL VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS PHE SEQRES 4 A 208 ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA LYS SEQRES 5 A 208 THR LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR ARG SEQRES 6 A 208 VAL VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP LEU SEQRES 7 A 208 ASN GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS ALA SEQRES 8 A 208 LEU PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA LYS SEQRES 9 A 208 GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO PRO SEQRES 10 A 208 SER ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU THR SEQRES 11 A 208 CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA VAL SEQRES 12 A 208 GLU TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR LYS SEQRES 13 A 208 THR THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE PHE SEQRES 14 A 208 LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP GLN SEQRES 15 A 208 GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU ALA SEQRES 16 A 208 LEU HIS ALA HIS TYR THR GLN LYS SER LEU SER LEU SER SEQRES 1 B 208 GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS ASP SEQRES 2 B 208 THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS VAL SEQRES 3 B 208 VAL VAL ASP VAL SER HIS GLU ASP PRO GLU VAL LYS PHE SEQRES 4 B 208 ASN TRP TYR VAL ASP GLY VAL GLU VAL HIS ASN ALA LYS SEQRES 5 B 208 THR LYS PRO ARG GLU GLU GLN TYR ASN SER THR TYR ARG SEQRES 6 B 208 VAL VAL SER VAL LEU THR VAL LEU HIS GLN ASP TRP LEU SEQRES 7 B 208 ASN GLY LYS GLU TYR LYS CYS LYS VAL SER ASN LYS ALA SEQRES 8 B 208 LEU PRO ALA PRO ILE GLU LYS THR ILE SER LYS ALA LYS SEQRES 9 B 208 GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO PRO SEQRES 10 B 208 SER ARG ASP GLU LEU THR LYS ASN GLN VAL SER LEU THR SEQRES 11 B 208 CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE ALA VAL SEQRES 12 B 208 GLU TRP GLU SER ASN GLY GLN PRO GLU ASN ASN TYR LYS SEQRES 13 B 208 THR THR PRO PRO VAL LEU ASP SER ASP GLY SER PHE PHE SEQRES 14 B 208 LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP GLN SEQRES 15 B 208 GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU ALA SEQRES 16 B 208 LEU HIS ALA HIS TYR THR GLN LYS SER LEU SER LEU SER HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG C 5 14 HET MAN C 6 11 HET NAG C 7 14 HET FUC C 8 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG D 5 14 HET MAN D 6 11 HET NAG D 7 14 HET FUC D 8 10 HET EDO A 509 4 HET EDO B 509 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 4(C6 H12 O6) FORMUL 3 FUC 2(C6 H12 O5) FORMUL 5 EDO 2(C2 H6 O2) FORMUL 7 HOH *118(H2 O) HELIX 1 AA1 LYS A 246 MET A 252 1 7 HELIX 2 AA2 LEU A 309 ASN A 315 1 7 HELIX 3 AA3 SER A 354 LYS A 360 5 7 HELIX 4 AA4 LYS A 414 GLN A 419 1 6 HELIX 5 AA5 LEU A 432 ALA A 434 5 3 HELIX 6 AA6 LYS B 246 MET B 252 1 7 HELIX 7 AA7 LEU B 309 ASN B 315 1 7 HELIX 8 AA8 SER B 354 LYS B 360 5 7 HELIX 9 AA9 LYS B 414 GLN B 419 1 6 HELIX 10 AB1 LEU B 432 TYR B 436 5 5 SHEET 1 AA1 4 SER A 239 PHE A 243 0 SHEET 2 AA1 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AA1 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AA1 4 ALA A 287 THR A 289 -1 N LYS A 288 O VAL A 305 SHEET 1 AA2 4 SER A 239 PHE A 243 0 SHEET 2 AA2 4 GLU A 258 VAL A 266 -1 O THR A 260 N PHE A 243 SHEET 3 AA2 4 TYR A 300 THR A 307 -1 O TYR A 300 N VAL A 266 SHEET 4 AA2 4 GLU A 293 GLU A 294 -1 N GLU A 293 O ARG A 301 SHEET 1 AA3 4 VAL A 282 VAL A 284 0 SHEET 2 AA3 4 VAL A 273 VAL A 279 -1 N VAL A 279 O VAL A 282 SHEET 3 AA3 4 TYR A 319 ASN A 325 -1 O LYS A 320 N TYR A 278 SHEET 4 AA3 4 ILE A 332 ILE A 336 -1 O ILE A 336 N TYR A 319 SHEET 1 AA4 4 GLN A 347 LEU A 351 0 SHEET 2 AA4 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AA4 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA4 4 TYR A 391 THR A 393 -1 N LYS A 392 O LYS A 409 SHEET 1 AA5 4 GLN A 347 LEU A 351 0 SHEET 2 AA5 4 GLN A 362 PHE A 372 -1 O THR A 366 N LEU A 351 SHEET 3 AA5 4 PHE A 404 ASP A 413 -1 O LEU A 410 N LEU A 365 SHEET 4 AA5 4 VAL A 397 LEU A 398 -1 N VAL A 397 O PHE A 405 SHEET 1 AA6 4 GLN A 386 PRO A 387 0 SHEET 2 AA6 4 ALA A 378 SER A 383 -1 N SER A 383 O GLN A 386 SHEET 3 AA6 4 PHE A 423 MET A 428 -1 O SER A 426 N GLU A 380 SHEET 4 AA6 4 TYR A 436 LEU A 441 -1 O THR A 437 N VAL A 427 SHEET 1 AA7 4 SER B 239 PHE B 243 0 SHEET 2 AA7 4 GLU B 258 VAL B 266 -1 O VAL B 262 N PHE B 241 SHEET 3 AA7 4 TYR B 300 THR B 307 -1 O SER B 304 N CYS B 261 SHEET 4 AA7 4 LYS B 288 GLU B 294 -1 N GLU B 293 O ARG B 301 SHEET 1 AA8 4 VAL B 282 VAL B 284 0 SHEET 2 AA8 4 LYS B 274 VAL B 279 -1 N VAL B 279 O VAL B 282 SHEET 3 AA8 4 TYR B 319 SER B 324 -1 O LYS B 320 N TYR B 278 SHEET 4 AA8 4 ILE B 332 ILE B 336 -1 O ILE B 336 N TYR B 319 SHEET 1 AA9 4 GLN B 347 LEU B 351 0 SHEET 2 AA9 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AA9 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 AA9 4 TYR B 391 THR B 393 -1 N LYS B 392 O LYS B 409 SHEET 1 AB1 4 GLN B 347 LEU B 351 0 SHEET 2 AB1 4 GLN B 362 PHE B 372 -1 O LEU B 368 N TYR B 349 SHEET 3 AB1 4 PHE B 404 ASP B 413 -1 O LEU B 410 N LEU B 365 SHEET 4 AB1 4 VAL B 397 LEU B 398 -1 N VAL B 397 O PHE B 405 SHEET 1 AB2 4 GLN B 386 PRO B 387 0 SHEET 2 AB2 4 ALA B 378 SER B 383 -1 N SER B 383 O GLN B 386 SHEET 3 AB2 4 PHE B 423 MET B 428 -1 O MET B 428 N ALA B 378 SHEET 4 AB2 4 THR B 437 LEU B 441 -1 O THR B 437 N VAL B 427 SSBOND 1 CYS A 261 CYS A 321 1555 1555 2.03 SSBOND 2 CYS A 367 CYS A 425 1555 1555 2.05 SSBOND 3 CYS B 261 CYS B 321 1555 1555 2.03 SSBOND 4 CYS B 367 CYS B 425 1555 1555 2.04 LINK ND2 ASN A 297 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN B 297 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O6 NAG C 1 C1 FUC C 8 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 6 1555 1555 1.44 LINK O2 MAN C 4 C1 NAG C 5 1555 1555 1.43 LINK O2 MAN C 6 C1 NAG C 7 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O6 NAG D 1 C1 FUC D 8 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O6 BMA D 3 C1 MAN D 6 1555 1555 1.44 LINK O2 MAN D 4 C1 NAG D 5 1555 1555 1.43 LINK O2 MAN D 6 C1 NAG D 7 1555 1555 1.44 CRYST1 49.179 74.952 146.691 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020334 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013342 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006817 0.00000