HEADER TRANSPORT PROTEIN/TRANSFERASE 01-OCT-14 4WJW TITLE CRYSTAL STRUCTURE OF THE CHS5-CHS6 EXOMER CARGO ADAPTOR COMPLEX BOUND TITLE 2 TO PORTION OF CHS3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITIN BIOSYNTHESIS PROTEIN CHS5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-77; COMPND 5 SYNONYM: PROTEIN CAL3; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CHITIN BIOSYNTHESIS PROTEIN CHS6; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PROTEIN CSD3; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: CHITIN SYNTHASE 3; COMPND 14 CHAIN: P; COMPND 15 SYNONYM: CHITIN-UDP ACETYL-GLUCOSAMINYL TRANSFERASE 3,CLASS-IV CHITIN COMPND 16 SYNTHASE 3; COMPND 17 EC: 2.4.1.16; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: CHS5, CAL3, YLR330W, L8543.18; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 559292; SOURCE 13 STRAIN: ATCC 204508 / S288C; SOURCE 14 GENE: CHS6, CSD3, YJL099W, J0838; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 20 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 21 ORGANISM_TAXID: 4932 KEYWDS ADAPTOR PROTEIN, CARGO BINDING, VESICULAR TRAFFICKING, CHITIN KEYWDS 2 SYNTHASE, BIOSYNTHETIC PROTEIN, TRANSPORT PROTEIN-TRANSFERASE KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.M.WEISKOFF,J.C.FROMME REVDAT 4 27-SEP-23 4WJW 1 SOURCE JRNL REMARK REVDAT 3 03-DEC-14 4WJW 1 JRNL REVDAT 2 29-OCT-14 4WJW 1 REMARK REVDAT 1 15-OCT-14 4WJW 0 SPRSDE 15-OCT-14 4WJW 4U9T JRNL AUTH A.M.WEISKOFF,J.C.FROMME JRNL TITL DISTINCT N-TERMINAL REGIONS OF THE EXOMER SECRETORY VESICLE JRNL TITL 2 CARGO CHS3 REGULATE ITS TRAFFICKING ITINERARY. JRNL REF FRONT CELL DEV BIOL V. 2 47 2014 JRNL REFN ESSN 2296-634X JRNL PMID 25364754 JRNL DOI 10.3389/FCELL.2014.00047 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 59892 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.340 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6596 - 6.2371 0.96 4312 150 0.1815 0.1863 REMARK 3 2 6.2371 - 4.9526 0.99 4232 147 0.2031 0.2489 REMARK 3 3 4.9526 - 4.3272 1.00 4201 144 0.1528 0.1787 REMARK 3 4 4.3272 - 3.9318 1.00 4178 144 0.1577 0.1934 REMARK 3 5 3.9318 - 3.6501 1.00 4164 144 0.1663 0.2122 REMARK 3 6 3.6501 - 3.4350 1.00 4162 144 0.1780 0.1957 REMARK 3 7 3.4350 - 3.2630 1.00 4126 142 0.1919 0.2320 REMARK 3 8 3.2630 - 3.1210 1.00 4121 143 0.1924 0.2396 REMARK 3 9 3.1210 - 3.0009 1.00 4111 142 0.1934 0.2281 REMARK 3 10 3.0009 - 2.8974 1.00 4128 143 0.1952 0.2187 REMARK 3 11 2.8974 - 2.8068 0.99 4078 140 0.1849 0.2274 REMARK 3 12 2.8068 - 2.7266 0.99 4095 141 0.1882 0.2394 REMARK 3 13 2.7266 - 2.6548 0.99 4076 141 0.1966 0.2209 REMARK 3 14 2.6548 - 2.5900 0.95 3908 135 0.2275 0.2689 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000203947. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0-4.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .9767 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59936 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 44.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4GNS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3 M AMMONIUM SULFATE, 0.1 M CITRIC REMARK 280 ACID, PH 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 68.92400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 68.92400 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 68.92400 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 68.92400 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 68.92400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 68.92400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -218.61300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 68.92400 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 810 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 LEU A 13 REMARK 465 ASP A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 LEU A 17 REMARK 465 VAL A 49 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 PHE B 4 REMARK 465 TRP B 5 REMARK 465 PRO B 6 REMARK 465 SER B 7 REMARK 465 GLU B 8 REMARK 465 THR B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 GLN B 12 REMARK 465 ASN B 13 REMARK 465 GLU B 14 REMARK 465 ILE B 15 REMARK 465 PRO B 16 REMARK 465 GLY B 17 REMARK 465 GLY B 18 REMARK 465 ASP B 19 REMARK 465 TYR B 20 REMARK 465 THR B 21 REMARK 465 PRO B 22 REMARK 465 GLY B 23 REMARK 465 ASN B 24 REMARK 465 SER B 25 REMARK 465 PRO B 26 REMARK 465 SER B 27 REMARK 465 VAL B 28 REMARK 465 GLN B 29 REMARK 465 LYS B 30 REMARK 465 LEU B 400 REMARK 465 ARG B 401 REMARK 465 LYS B 402 REMARK 465 ASN B 403 REMARK 465 ASP B 404 REMARK 465 GLY B 405 REMARK 465 HIS B 406 REMARK 465 LEU B 407 REMARK 465 GLU B 408 REMARK 465 THR B 409 REMARK 465 MET B 410 REMARK 465 TYR B 411 REMARK 465 SER B 412 REMARK 465 GLU B 555 REMARK 465 THR B 556 REMARK 465 GLU B 557 REMARK 465 PHE B 558 REMARK 465 TYR B 559 REMARK 465 GLN B 560 REMARK 465 ALA B 561 REMARK 465 SER B 562 REMARK 465 ASN B 563 REMARK 465 ASN B 564 REMARK 465 ILE B 565 REMARK 465 ILE B 566 REMARK 465 ASP B 567 REMARK 465 GLU B 568 REMARK 465 ASN B 569 REMARK 465 GLY B 570 REMARK 465 HIS B 571 REMARK 465 ILE B 572 REMARK 465 PRO B 573 REMARK 465 MET B 574 REMARK 465 GLU B 575 REMARK 465 SER B 576 REMARK 465 ARG B 577 REMARK 465 LYS B 578 REMARK 465 LYS B 579 REMARK 465 ARG B 580 REMARK 465 PHE B 581 REMARK 465 VAL B 744 REMARK 465 GLN B 745 REMARK 465 PRO B 746 REMARK 465 GLY B 747 REMARK 465 THR B 748 REMARK 465 GLU B 749 REMARK 465 ASN B 750 REMARK 465 LEU B 751 REMARK 465 TYR B 752 REMARK 465 PHE B 753 REMARK 465 GLN B 754 REMARK 465 GLY B 755 REMARK 465 HIS B 756 REMARK 465 HIS B 757 REMARK 465 HIS B 758 REMARK 465 HIS B 759 REMARK 465 HIS B 760 REMARK 465 HIS B 761 REMARK 465 ASP P 0 REMARK 465 ASP P 1 REMARK 465 SER P 16 REMARK 465 ARG P 17 REMARK 465 CYS P 18 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 4 CG1 CG2 REMARK 470 ASP A 5 CG OD1 OD2 REMARK 470 VAL A 6 CG1 CG2 REMARK 470 LEU A 7 CG CD1 CD2 REMARK 470 LEU A 8 CG CD1 CD2 REMARK 470 THR A 9 OG1 CG2 REMARK 470 VAL A 10 CG1 CG2 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 LEU A 19 CG CD1 CD2 REMARK 470 LEU A 20 CG CD1 CD2 REMARK 470 THR A 21 OG1 CG2 REMARK 470 THR A 22 OG1 CG2 REMARK 470 GLN A 23 CG CD OE1 NE2 REMARK 470 ASP A 24 CG OD1 OD2 REMARK 470 HIS A 25 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 26 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 27 CG1 CG2 REMARK 470 ILE A 28 CG1 CG2 CD1 REMARK 470 GLU A 29 CG CD OE1 OE2 REMARK 470 PHE A 30 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PRO A 31 CG CD REMARK 470 THR A 32 OG1 CG2 REMARK 470 VAL A 33 CG1 CG2 REMARK 470 LEU A 34 CG CD1 CD2 REMARK 470 LEU A 35 CG CD1 CD2 REMARK 470 PRO A 36 CG CD REMARK 470 GLU A 37 CG CD OE1 OE2 REMARK 470 ASN A 38 CG OD1 ND2 REMARK 470 VAL A 39 CG1 CG2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 SER A 43 OG REMARK 470 ILE A 44 CG1 CG2 CD1 REMARK 470 ILE A 45 CG1 CG2 CD1 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 MET A 47 CG SD CE REMARK 470 GLN A 48 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 452 O HOH B 876 2.00 REMARK 500 OE1 GLU B 466 O HOH B 860 2.03 REMARK 500 OE1 GLU B 94 O HOH B 824 2.04 REMARK 500 O LEU B 521 OG SER B 525 2.07 REMARK 500 O PHE B 414 N THR B 416 2.09 REMARK 500 NH2 ARG B 413 O HOH B 874 2.10 REMARK 500 O HOH B 816 O HOH B 856 2.12 REMARK 500 O PRO B 314 N LEU B 316 2.13 REMARK 500 O TYR B 471 O HOH B 822 2.15 REMARK 500 O HOH B 870 O HOH B 873 2.16 REMARK 500 OE2 GLU B 583 N LEU B 586 2.18 REMARK 500 O HOH B 865 O HOH B 867 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 58 CD - CE - NZ ANGL. DEV. = -15.7 DEGREES REMARK 500 LEU B 319 CB - CA - C ANGL. DEV. = -13.0 DEGREES REMARK 500 LEU B 319 CA - CB - CG ANGL. DEV. = 33.5 DEGREES REMARK 500 LEU B 319 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 5 79.40 -156.57 REMARK 500 VAL A 6 -168.34 -103.41 REMARK 500 LEU A 7 96.69 -161.23 REMARK 500 PRO A 31 91.76 53.18 REMARK 500 VAL A 33 4.67 -153.06 REMARK 500 THR A 76 -164.36 -109.78 REMARK 500 HIS B 87 -83.75 -44.02 REMARK 500 LYS B 89 49.30 -102.06 REMARK 500 VAL B 103 59.50 -97.39 REMARK 500 GLU B 165 -89.63 40.19 REMARK 500 PRO B 314 -104.82 -77.95 REMARK 500 LEU B 315 -52.57 21.08 REMARK 500 LEU B 319 -87.83 3.61 REMARK 500 ARG B 325 107.21 16.40 REMARK 500 GLU B 386 72.68 -102.80 REMARK 500 PHE B 414 68.09 31.60 REMARK 500 LEU B 415 2.49 -19.55 REMARK 500 THR B 416 152.75 -44.63 REMARK 500 SER B 417 10.81 115.79 REMARK 500 ASP B 478 -91.96 -144.07 REMARK 500 LEU B 483 -63.44 59.97 REMARK 500 ASN B 515 17.28 -142.48 REMARK 500 GLU B 583 179.69 171.91 REMARK 500 SER B 605 -132.66 -162.60 REMARK 500 ASN B 606 119.24 -31.01 REMARK 500 ASP B 608 83.23 58.34 REMARK 500 ALA B 642 -77.06 -64.32 REMARK 500 HIS B 742 -43.86 -139.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 313 PRO B 314 146.30 REMARK 500 LEU B 319 ASN B 320 -129.77 REMARK 500 THR B 416 SER B 417 148.29 REMARK 500 SER B 605 ASN B 606 -127.19 REMARK 500 ASN B 606 LYS B 607 108.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GNS RELATED DB: PDB REMARK 900 4GNS CONTAINS THE CHS5/CHS6 EXOMER COMPLEX WITH A LONGER FRAGMENT REMARK 900 OF CHS5 (1- 299) LACKING THE CHS3 PEPTIDE. REMARK 900 RELATED ID: 4IN3 RELATED DB: PDB REMARK 900 4IN3 CONTAINS THE CHS5(1-77)/BCH1 EXOMER COMPLEX REMARK 900 RELATED ID: 4Q66 RELATED DB: PDB REMARK 900 4Q66 CONTAINS THE CHS5(1-299)/BCH1 EXOMER COMPLEX BOUND TO ITS REMARK 900 REGULATOR ARF1 DBREF 4WJW A 1 77 UNP Q12114 CHS5_YEAST 1 77 DBREF 4WJW B 1 746 UNP P40955 CHS6_YEAST 1 746 DBREF 4WJW P 0 18 PDB 4WJW 4WJW 0 18 SEQADV 4WJW GLY B 747 UNP P40955 EXPRESSION TAG SEQADV 4WJW THR B 748 UNP P40955 EXPRESSION TAG SEQADV 4WJW GLU B 749 UNP P40955 EXPRESSION TAG SEQADV 4WJW ASN B 750 UNP P40955 EXPRESSION TAG SEQADV 4WJW LEU B 751 UNP P40955 EXPRESSION TAG SEQADV 4WJW TYR B 752 UNP P40955 EXPRESSION TAG SEQADV 4WJW PHE B 753 UNP P40955 EXPRESSION TAG SEQADV 4WJW GLN B 754 UNP P40955 EXPRESSION TAG SEQADV 4WJW GLY B 755 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 756 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 757 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 758 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 759 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 760 UNP P40955 EXPRESSION TAG SEQADV 4WJW HIS B 761 UNP P40955 EXPRESSION TAG SEQRES 1 A 77 MET SER SER VAL ASP VAL LEU LEU THR VAL GLY LYS LEU SEQRES 2 A 77 ASP ALA SER LEU ALA LEU LEU THR THR GLN ASP HIS HIS SEQRES 3 A 77 VAL ILE GLU PHE PRO THR VAL LEU LEU PRO GLU ASN VAL SEQRES 4 A 77 LYS ALA GLY SER ILE ILE LYS MET GLN VAL SER GLN ASN SEQRES 5 A 77 LEU GLU GLU GLU LYS LYS GLN ARG ASN HIS PHE LYS SER SEQRES 6 A 77 ILE GLN ALA LYS ILE LEU GLU LYS TYR GLY THR HIS SEQRES 1 B 761 MET ASN LEU PHE TRP PRO SER GLU THR LYS LYS GLN ASN SEQRES 2 B 761 GLU ILE PRO GLY GLY ASP TYR THR PRO GLY ASN SER PRO SEQRES 3 B 761 SER VAL GLN LYS GLY TYR GLN PHE LEU ASN ARG ASP ILE SEQRES 4 B 761 PHE LYS SER CYS PRO ARG ILE MET GLU ARG GLN PHE GLY SEQRES 5 B 761 GLU CYS LEU HIS ASN ARG THR HIS LEU ILE LYS ASP LEU SEQRES 6 B 761 ILE SER SER GLY ASN VAL GLY LEU GLY PRO ILE GLU ILE SEQRES 7 B 761 VAL HIS MET SER TYR LEU ASN LYS HIS GLU LYS GLU GLU SEQRES 8 B 761 PHE GLY GLU TYR PHE TYR VAL THR GLY ILE GLU VAL SER SEQRES 9 B 761 GLY PRO ALA MET PRO VAL GLU PHE LEU GLU VAL LEU LYS SEQRES 10 B 761 SER SER LYS ARG ILE SER LYS ASN ILE SER ASN ASN ILE SEQRES 11 B 761 ILE LEU THR TYR CYS CYS PHE ASN PHE PHE SER ASN LEU SEQRES 12 B 761 ASP ILE ARG ILE ARG TYR ASP ALA ASP ASP THR PHE GLN SEQRES 13 B 761 THR THR ALA ILE ASP CYS ASN LYS GLU THR THR ASP LEU SEQRES 14 B 761 THR MET THR GLU LYS MET TRP GLU GLU THR PHE ALA SER SEQRES 15 B 761 SER VAL ILE ARG ALA ILE ILE THR ASN THR ASN PRO GLU SEQRES 16 B 761 LEU LYS PRO PRO GLY LEU VAL GLU CYS PRO PHE TYR VAL SEQRES 17 B 761 GLY LYS ASP THR ILE SER SER CYS LYS LYS ILE ILE GLU SEQRES 18 B 761 LEU LEU CYS ARG PHE LEU PRO ARG SER LEU ASN CYS GLY SEQRES 19 B 761 TRP ASP SER THR LYS SER MET GLN ALA THR ILE VAL ASN SEQRES 20 B 761 ASN TYR LEU MET TYR SER LEU LYS SER PHE ILE ALA ILE SEQRES 21 B 761 THR PRO SER LEU VAL ASP PHE THR ILE ASP TYR LEU LYS SEQRES 22 B 761 GLY LEU THR LYS LYS ASP PRO ILE HIS ASP ILE TYR TYR SEQRES 23 B 761 LYS THR ALA MET ILE THR ILE LEU ASP HIS ILE GLU THR SEQRES 24 B 761 LYS GLU LEU ASP MET ILE THR ILE LEU ASN GLU THR LEU SEQRES 25 B 761 ASP PRO LEU LEU SER LEU LEU ASN ASP LEU PRO PRO ARG SEQRES 26 B 761 ASP ALA ASP SER ALA ARG LEU MET ASN CYS MET SER ASP SEQRES 27 B 761 LEU LEU ASN ILE GLN THR ASN PHE LEU LEU ASN ARG GLY SEQRES 28 B 761 ASP TYR GLU LEU ALA LEU GLY VAL SER ASN THR SER THR SEQRES 29 B 761 GLU LEU ALA LEU ASP SER PHE GLU SER TRP TYR ASN LEU SEQRES 30 B 761 ALA ARG CYS HIS ILE LYS LYS GLU GLU TYR GLU LYS ALA SEQRES 31 B 761 LEU PHE ALA ILE ASN SER MET PRO ARG LEU ARG LYS ASN SEQRES 32 B 761 ASP GLY HIS LEU GLU THR MET TYR SER ARG PHE LEU THR SEQRES 33 B 761 SER ASN TYR TYR LYS LYS PRO LEU ASN GLY THR ARG GLU SEQRES 34 B 761 HIS TYR ASP LEU THR ALA MET GLU PHE THR ASN LEU SER SEQRES 35 B 761 GLY THR LEU ARG ASN TRP LYS GLU ASP GLU LEU LYS ARG SEQRES 36 B 761 GLN ILE PHE GLY ARG ILE ALA MET ILE ASN GLU LYS LYS SEQRES 37 B 761 ILE GLY TYR THR LYS GLU ILE TRP ASP ASP ILE ALA ILE SEQRES 38 B 761 LYS LEU GLY PRO ILE CYS GLY PRO GLN SER VAL ASN LEU SEQRES 39 B 761 ILE ASN TYR VAL SER PRO GLN GLU VAL LYS ASN ILE LYS SEQRES 40 B 761 ASN ILE ASN LEU ILE ALA ARG ASN THR ILE GLY LYS GLN SEQRES 41 B 761 LEU GLY TRP PHE SER GLY LYS ILE TYR GLY LEU LEU MET SEQRES 42 B 761 GLU ILE VAL ASN LYS ILE GLY TRP ASN GLY LEU LEU ASN SEQRES 43 B 761 ILE ARG THR GLU ALA PHE MET MET GLU THR GLU PHE TYR SEQRES 44 B 761 GLN ALA SER ASN ASN ILE ILE ASP GLU ASN GLY HIS ILE SEQRES 45 B 761 PRO MET GLU SER ARG LYS LYS ARG PHE CYS GLU GLY TRP SEQRES 46 B 761 LEU ASP ASP LEU PHE LEU ASP LEU TYR GLN ASP LEU LYS SEQRES 47 B 761 LEU SER LYS ILE SER LEU SER ASN LYS ASP GLU LYS HIS SEQRES 48 B 761 SER GLY LEU GLU TRP GLU LEU LEU GLY LEU ILE MET LEU SEQRES 49 B 761 ARG THR TRP HIS TRP GLU ASP ALA VAL ALA CYS LEU ARG SEQRES 50 B 761 THR SER ILE VAL ALA ARG PHE ASP PRO VAL SER CYS GLN SEQRES 51 B 761 GLN LEU LEU LYS ILE TYR LEU GLN PRO PRO LYS ASN ILE SEQRES 52 B 761 GLN GLU VAL THR LEU LEU ASP THR ASP THR ILE ILE SER SEQRES 53 B 761 LEU LEU ILE LYS LYS ILE SER TYR ASP CYS ARG TYR TYR SEQRES 54 B 761 ASN TYR CYS GLN ILE PHE ASN LEU GLN LEU LEU GLU LYS SEQRES 55 B 761 LEU CYS ASN GLU LEU GLY THR HIS ILE LEU ARG ASN LYS SEQRES 56 B 761 ILE LEU LEU GLN PRO SER ILE GLY ASP GLU ILE MET VAL SEQRES 57 B 761 MET ILE ASP ALA MET LEU ALA TRP ILE ALA ASP LEU ASP SEQRES 58 B 761 HIS THR VAL GLN PRO GLY THR GLU ASN LEU TYR PHE GLN SEQRES 59 B 761 GLY HIS HIS HIS HIS HIS HIS SEQRES 1 P 19 ASP ASP TYR TYR LEU ASN LEU ASN GLN ASP GLU GLU SER SEQRES 2 P 19 LEU LEU ARG SER ARG CYS FORMUL 4 HOH *92(H2 O) HELIX 1 AA1 GLU A 56 GLY A 75 1 20 HELIX 2 AA2 TYR B 32 LYS B 41 1 10 HELIX 3 AA3 GLY B 52 SER B 67 1 16 HELIX 4 AA4 PRO B 106 SER B 119 1 14 HELIX 5 AA5 THR B 172 THR B 192 1 21 HELIX 6 AA6 ASN B 193 LYS B 197 5 5 HELIX 7 AA7 ASP B 211 PHE B 226 1 16 HELIX 8 AA8 LEU B 227 CYS B 233 5 7 HELIX 9 AA9 ASN B 248 ALA B 259 1 12 HELIX 10 AB1 ILE B 260 SER B 263 5 4 HELIX 11 AB2 LEU B 264 ASP B 279 1 16 HELIX 12 AB3 HIS B 282 ASP B 295 1 14 HELIX 13 AB4 ILE B 297 THR B 299 5 3 HELIX 14 AB5 LYS B 300 ASP B 313 1 14 HELIX 15 AB6 PRO B 314 LEU B 318 5 5 HELIX 16 AB7 ASP B 326 ARG B 350 1 25 HELIX 17 AB8 ASP B 352 ALA B 367 1 16 HELIX 18 AB9 SER B 370 LYS B 384 1 15 HELIX 19 AC1 GLU B 386 SER B 396 1 11 HELIX 20 AC2 THR B 434 LEU B 445 1 12 HELIX 21 AC3 LYS B 449 GLN B 456 1 8 HELIX 22 AC4 THR B 472 ASP B 477 1 6 HELIX 23 AC5 GLY B 488 ASN B 493 5 6 HELIX 24 AC6 SER B 499 ASN B 505 1 7 HELIX 25 AC7 ASN B 508 ARG B 514 1 7 HELIX 26 AC8 LEU B 521 MET B 553 1 33 HELIX 27 AC9 GLY B 584 SER B 600 1 17 HELIX 28 AD1 SER B 612 THR B 626 1 15 HELIX 29 AD2 HIS B 628 ARG B 643 1 16 HELIX 30 AD3 ASP B 645 GLN B 658 1 14 HELIX 31 AD4 ASP B 670 TYR B 688 1 19 HELIX 32 AD5 GLN B 693 GLY B 708 1 16 HELIX 33 AD6 GLY B 708 GLN B 719 1 12 HELIX 34 AD7 GLY B 723 ASP B 741 1 19 HELIX 35 AD8 TYR P 3 LEU P 14 1 12 SHEET 1 AA1 2 THR A 9 VAL A 10 0 SHEET 2 AA1 2 LEU A 20 THR A 21 -1 O THR A 21 N THR A 9 SHEET 1 AA2 7 ASP B 168 LEU B 169 0 SHEET 2 AA2 7 PHE B 155 ASP B 161 -1 N ALA B 159 O LEU B 169 SHEET 3 AA2 7 LEU B 143 TYR B 149 -1 N ARG B 146 O THR B 158 SHEET 4 AA2 7 ILE B 131 ASN B 138 -1 N LEU B 132 O TYR B 149 SHEET 5 AA2 7 GLU B 77 LEU B 84 -1 N HIS B 80 O THR B 133 SHEET 6 AA2 7 GLU B 91 THR B 99 -1 O GLU B 94 N MET B 81 SHEET 7 AA2 7 VAL B 202 GLU B 203 1 O VAL B 202 N THR B 99 SHEET 1 AA3 8 ASP B 168 LEU B 169 0 SHEET 2 AA3 8 PHE B 155 ASP B 161 -1 N ALA B 159 O LEU B 169 SHEET 3 AA3 8 LEU B 143 TYR B 149 -1 N ARG B 146 O THR B 158 SHEET 4 AA3 8 ILE B 131 ASN B 138 -1 N LEU B 132 O TYR B 149 SHEET 5 AA3 8 GLU B 77 LEU B 84 -1 N HIS B 80 O THR B 133 SHEET 6 AA3 8 GLU B 91 THR B 99 -1 O GLU B 94 N MET B 81 SHEET 7 AA3 8 ARG B 45 MET B 47 -1 N ILE B 46 O TYR B 95 SHEET 8 AA3 8 ILE B 461 ALA B 462 -1 O ALA B 462 N ARG B 45 CRYST1 218.613 218.613 137.848 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004574 0.002641 0.000000 0.00000 SCALE2 0.000000 0.005282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007254 0.00000