HEADER STRUCTURAL GENOMICS 03-OCT-14 4WKW TITLE CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN FROM TITLE 2 MYCOBACTERIUM LEPRAE DETERMINED BY IODIDE SAD PHASING COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM LEPRAE; SOURCE 3 ORGANISM_TAXID: 561304; SOURCE 4 STRAIN: BR4923; SOURCE 5 GENE: MLBR01485; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MYLEA.18251.A.A1 KEYWDS SSGCID, MYCOBACTERIUM LEPRAE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL KEYWDS 2 GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 27-DEC-23 4WKW 1 REMARK REVDAT 2 22-NOV-17 4WKW 1 SOURCE REMARK REVDAT 1 22-OCT-14 4WKW 0 JRNL AUTH SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 2 (SSGCID),D.M.DRANOW,C.M.LUKACS,D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A CONSERVED HYPOTHETICAL PROTEIN FROM JRNL TITL 2 MYCOBACTERIUM LEPRAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1810) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 20270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4063 - 4.3981 0.99 2836 126 0.1534 0.1973 REMARK 3 2 4.3981 - 3.4915 0.97 2713 136 0.1710 0.1845 REMARK 3 3 3.4915 - 3.0503 1.00 2776 150 0.1980 0.2627 REMARK 3 4 3.0503 - 2.7714 1.00 2777 151 0.2233 0.2601 REMARK 3 5 2.7714 - 2.5728 0.99 2726 161 0.2211 0.2704 REMARK 3 6 2.5728 - 2.4212 0.99 2773 149 0.2352 0.3070 REMARK 3 7 2.4212 - 2.2999 0.96 2676 120 0.2533 0.3550 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3017 REMARK 3 ANGLE : 1.026 4124 REMARK 3 CHIRALITY : 0.038 459 REMARK 3 PLANARITY : 0.005 538 REMARK 3 DIHEDRAL : 12.403 1041 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 6 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7356 87.8190 11.9832 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.3189 REMARK 3 T33: 0.2865 T12: 0.0347 REMARK 3 T13: 0.0337 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 1.5847 L22: 3.1440 REMARK 3 L33: 1.9927 L12: 0.7734 REMARK 3 L13: -1.0412 L23: 1.1396 REMARK 3 S TENSOR REMARK 3 S11: 0.1483 S12: 0.4074 S13: 0.0887 REMARK 3 S21: -0.3163 S22: -0.0335 S23: -0.0547 REMARK 3 S31: -0.0021 S32: -0.1061 S33: -0.0925 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9460 83.7117 11.9961 REMARK 3 T TENSOR REMARK 3 T11: 0.3869 T22: 0.2464 REMARK 3 T33: 0.2396 T12: 0.0430 REMARK 3 T13: 0.0217 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 2.1869 L22: 2.8285 REMARK 3 L33: 1.6615 L12: 1.2728 REMARK 3 L13: -0.7424 L23: 0.9452 REMARK 3 S TENSOR REMARK 3 S11: 0.0068 S12: -0.0182 S13: 0.1972 REMARK 3 S21: -0.1480 S22: 0.0433 S23: -0.0675 REMARK 3 S31: -0.0420 S32: -0.1125 S33: -0.0666 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3643 77.2449 18.8559 REMARK 3 T TENSOR REMARK 3 T11: 0.7205 T22: 0.7724 REMARK 3 T33: 0.8208 T12: 0.2999 REMARK 3 T13: -0.0011 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 0.1625 L22: 0.0673 REMARK 3 L33: 0.0221 L12: 0.0872 REMARK 3 L13: -0.0283 L23: -0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.7736 S12: 0.1399 S13: -0.2576 REMARK 3 S21: -0.4762 S22: -0.9139 S23: -0.0184 REMARK 3 S31: 1.4519 S32: 0.9295 S33: 0.0501 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 70 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1155 87.2447 5.7052 REMARK 3 T TENSOR REMARK 3 T11: 0.3979 T22: 0.2398 REMARK 3 T33: 0.4655 T12: 0.0462 REMARK 3 T13: 0.1547 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.9466 L22: 2.0072 REMARK 3 L33: 5.2539 L12: -0.0473 REMARK 3 L13: -1.1989 L23: 0.2889 REMARK 3 S TENSOR REMARK 3 S11: 0.1809 S12: 0.0727 S13: 0.2680 REMARK 3 S21: -0.5149 S22: 0.0595 S23: -0.8080 REMARK 3 S31: -0.1792 S32: 0.2059 S33: -0.2158 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4511 79.2401 17.6522 REMARK 3 T TENSOR REMARK 3 T11: 0.2053 T22: 0.2339 REMARK 3 T33: 0.1619 T12: -0.0255 REMARK 3 T13: 0.0124 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 4.1156 L22: 7.4088 REMARK 3 L33: 4.7660 L12: -0.3529 REMARK 3 L13: -2.0246 L23: 1.0018 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: 0.0677 S13: -0.0017 REMARK 3 S21: 0.0540 S22: -0.0681 S23: 0.0174 REMARK 3 S31: 0.1556 S32: -0.0705 S33: 0.0225 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8467 114.2991 30.0944 REMARK 3 T TENSOR REMARK 3 T11: 0.2929 T22: 0.3913 REMARK 3 T33: 0.3356 T12: 0.0641 REMARK 3 T13: 0.0986 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 2.2011 L22: 4.4652 REMARK 3 L33: 2.7393 L12: 0.5310 REMARK 3 L13: -1.4369 L23: 1.9160 REMARK 3 S TENSOR REMARK 3 S11: 0.2194 S12: -0.3107 S13: 0.1717 REMARK 3 S21: -0.1118 S22: -0.0736 S23: -0.2782 REMARK 3 S31: 0.0503 S32: 0.5974 S33: -0.2207 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5506 107.7037 26.7619 REMARK 3 T TENSOR REMARK 3 T11: 0.2835 T22: 0.3723 REMARK 3 T33: 0.2812 T12: 0.0846 REMARK 3 T13: 0.0650 T23: 0.0871 REMARK 3 L TENSOR REMARK 3 L11: 5.0220 L22: 5.2689 REMARK 3 L33: 5.5855 L12: 2.0584 REMARK 3 L13: 1.9194 L23: 3.6888 REMARK 3 S TENSOR REMARK 3 S11: 0.1722 S12: 0.2409 S13: -0.6729 REMARK 3 S21: -0.1439 S22: -0.0480 S23: 0.1294 REMARK 3 S31: 0.6527 S32: 0.1786 S33: -0.0989 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 70 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0030 107.4333 16.8601 REMARK 3 T TENSOR REMARK 3 T11: 0.3795 T22: 0.2823 REMARK 3 T33: 0.2834 T12: 0.0946 REMARK 3 T13: 0.0726 T23: 0.0416 REMARK 3 L TENSOR REMARK 3 L11: 2.5437 L22: 5.1675 REMARK 3 L33: 3.2183 L12: 1.5867 REMARK 3 L13: -1.3433 L23: 0.5793 REMARK 3 S TENSOR REMARK 3 S11: 0.0888 S12: 0.1800 S13: 0.0927 REMARK 3 S21: -0.6436 S22: 0.0491 S23: -0.1453 REMARK 3 S31: -0.1882 S32: -0.0410 S33: -0.1285 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 148 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5986 109.0610 36.8957 REMARK 3 T TENSOR REMARK 3 T11: 0.5218 T22: 0.4298 REMARK 3 T33: 0.4531 T12: -0.0521 REMARK 3 T13: 0.1619 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 3.4805 L22: 4.7565 REMARK 3 L33: 2.1624 L12: 1.9825 REMARK 3 L13: -0.5744 L23: 1.9780 REMARK 3 S TENSOR REMARK 3 S11: 0.4011 S12: -0.2357 S13: 0.3897 REMARK 3 S21: 0.1586 S22: -0.1232 S23: 0.4334 REMARK 3 S31: 0.1296 S32: -0.1054 S33: 0.0703 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 165 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4873 120.7134 38.7338 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.3128 REMARK 3 T33: 0.2870 T12: 0.0133 REMARK 3 T13: 0.0044 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: 3.2408 L22: 4.6023 REMARK 3 L33: 4.5764 L12: 0.8307 REMARK 3 L13: -3.0460 L23: -1.0346 REMARK 3 S TENSOR REMARK 3 S11: 0.1611 S12: -0.0285 S13: 0.0503 REMARK 3 S21: -0.1219 S22: 0.0532 S23: -0.3160 REMARK 3 S31: -0.4755 S32: 0.1415 S33: -0.1589 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WKW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000204000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : RIGAKU VARIMAX HF REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20285 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AT 40MG/ML MIXED 1:1 WITH MCSG1(B1): REMARK 280 20% PEG-4000, 01.M MES/NAOH, PH=6.5, 0.6M NACL, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 42.28500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.09500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 42.28500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.09500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 55.95275 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 65.75239 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 42.28500 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -42.09500 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 13.66775 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -42.09500 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 65.75239 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 13.66775 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -42.09500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 65.75239 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 146 REMARK 465 VAL A 147 REMARK 465 GLY A 148 REMARK 465 ASP A 149 REMARK 465 ASP A 150 REMARK 465 MET B -20 REMARK 465 ALA B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 MET B -12 REMARK 465 GLY B -11 REMARK 465 THR B -10 REMARK 465 LEU B -9 REMARK 465 GLU B -8 REMARK 465 ALA B -7 REMARK 465 GLN B -6 REMARK 465 THR B -5 REMARK 465 GLN B -4 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 GLU B 3 REMARK 465 LYS B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 VAL B 7 REMARK 465 LYS B 8 REMARK 465 ASN B 53 REMARK 465 ARG B 54 REMARK 465 GLU B 55 REMARK 465 ASP B 56 REMARK 465 LEU B 57 REMARK 465 THR B 58 REMARK 465 GLU B 59 REMARK 465 ASN B 60 REMARK 465 TYR B 61 REMARK 465 LEU B 62 REMARK 465 GLU B 63 REMARK 465 ASN B 64 REMARK 465 ILE B 65 REMARK 465 THR B 66 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 6 OG REMARK 470 VAL A 7 CG1 CG2 REMARK 470 ASN A 53 CG OD1 ND2 REMARK 470 ARG A 54 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 GLU A 59 CG CD OE1 OE2 REMARK 470 GLU A 63 CG CD OE1 OE2 REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 GLN A 128 CG CD OE1 NE2 REMARK 470 VAL A 151 CG1 CG2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLN A 205 CG CD OE1 NE2 REMARK 470 GLN B 10 CG CD OE1 NE2 REMARK 470 LYS B 67 CG CD CE NZ REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 ASP B 149 CG OD1 OD2 REMARK 470 ASP B 150 CG OD1 OD2 REMARK 470 VAL B 151 CG1 CG2 REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 99 -66.10 -103.78 REMARK 500 ASN B 51 73.95 -103.53 REMARK 500 HIS B 99 -61.09 -104.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SSGCID-MYLEA.18251.A RELATED DB: TARGETTRACK DBREF 4WKW A 1 207 UNP B8ZRP7 B8ZRP7_MYCLB 1 207 DBREF 4WKW B 1 207 UNP B8ZRP7 B8ZRP7_MYCLB 1 207 SEQADV 4WKW MET A -20 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW ALA A -19 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -18 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -17 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -16 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -15 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -14 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS A -13 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW MET A -12 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY A -11 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW THR A -10 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW LEU A -9 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLU A -8 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW ALA A -7 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLN A -6 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW THR A -5 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLN A -4 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY A -3 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW PRO A -2 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY A -1 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW SER A 0 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW MET B -20 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW ALA B -19 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -18 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -17 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -16 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -15 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -14 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW HIS B -13 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW MET B -12 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY B -11 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW THR B -10 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW LEU B -9 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLU B -8 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW ALA B -7 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLN B -6 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW THR B -5 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLN B -4 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY B -3 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW PRO B -2 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW GLY B -1 UNP B8ZRP7 EXPRESSION TAG SEQADV 4WKW SER B 0 UNP B8ZRP7 EXPRESSION TAG SEQRES 1 A 228 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 228 ALA GLN THR GLN GLY PRO GLY SER MET PRO GLU LYS ALA SEQRES 3 A 228 SER VAL LYS TYR GLN ALA ASP LEU TRP PHE ASP PRO LEU SEQRES 4 A 228 CYS PRO TRP CYS TRP ILE THR SER ARG TRP ILE LEU GLU SEQRES 5 A 228 VAL GLU LYS VAL ARG ASP VAL GLU VAL HIS PHE HIS VAL SEQRES 6 A 228 MET SER LEU ALA ILE LEU ASN GLU ASN ARG GLU ASP LEU SEQRES 7 A 228 THR GLU ASN TYR LEU GLU ASN ILE THR LYS ALA TRP GLY SEQRES 8 A 228 PRO ALA ARG VAL VAL ILE ALA ALA GLU GLN ALA ASN GLY SEQRES 9 A 228 ALA SER VAL LEU ASP PRO LEU TYR THR ALA MET GLY ILE SEQRES 10 A 228 ARG ILE HIS ASN GLU ASP ASN LYS ASN LEU ASP GLU VAL SEQRES 11 A 228 ILE LYS ARG SER LEU ALA ASP THR GLY LEU PRO ALA GLU SEQRES 12 A 228 LEU ALA ALA ALA ALA GLN SER ASN ALA TYR ASP ASP ALA SEQRES 13 A 228 LEU ARG GLU SER HIS HIS ALA GLY MET ASP PRO VAL GLY SEQRES 14 A 228 ASP ASP VAL GLY THR PRO THR VAL HIS VAL ASN GLY VAL SEQRES 15 A 228 ALA PHE PHE GLY PRO VAL LEU SER LYS ILE PRO ARG GLY SEQRES 16 A 228 GLU GLU ALA GLY LYS LEU TRP ASP ALA SER LEU THR LEU SEQRES 17 A 228 ALA ALA TYR PRO HIS PHE PHE GLU LEU LYS ARG THR ARG SEQRES 18 A 228 THR GLU PRO PRO GLN PHE ALA SEQRES 1 B 228 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 B 228 ALA GLN THR GLN GLY PRO GLY SER MET PRO GLU LYS ALA SEQRES 3 B 228 SER VAL LYS TYR GLN ALA ASP LEU TRP PHE ASP PRO LEU SEQRES 4 B 228 CYS PRO TRP CYS TRP ILE THR SER ARG TRP ILE LEU GLU SEQRES 5 B 228 VAL GLU LYS VAL ARG ASP VAL GLU VAL HIS PHE HIS VAL SEQRES 6 B 228 MET SER LEU ALA ILE LEU ASN GLU ASN ARG GLU ASP LEU SEQRES 7 B 228 THR GLU ASN TYR LEU GLU ASN ILE THR LYS ALA TRP GLY SEQRES 8 B 228 PRO ALA ARG VAL VAL ILE ALA ALA GLU GLN ALA ASN GLY SEQRES 9 B 228 ALA SER VAL LEU ASP PRO LEU TYR THR ALA MET GLY ILE SEQRES 10 B 228 ARG ILE HIS ASN GLU ASP ASN LYS ASN LEU ASP GLU VAL SEQRES 11 B 228 ILE LYS ARG SER LEU ALA ASP THR GLY LEU PRO ALA GLU SEQRES 12 B 228 LEU ALA ALA ALA ALA GLN SER ASN ALA TYR ASP ASP ALA SEQRES 13 B 228 LEU ARG GLU SER HIS HIS ALA GLY MET ASP PRO VAL GLY SEQRES 14 B 228 ASP ASP VAL GLY THR PRO THR VAL HIS VAL ASN GLY VAL SEQRES 15 B 228 ALA PHE PHE GLY PRO VAL LEU SER LYS ILE PRO ARG GLY SEQRES 16 B 228 GLU GLU ALA GLY LYS LEU TRP ASP ALA SER LEU THR LEU SEQRES 17 B 228 ALA ALA TYR PRO HIS PHE PHE GLU LEU LYS ARG THR ARG SEQRES 18 B 228 THR GLU PRO PRO GLN PHE ALA HET EDO A 301 4 HET EDO B 301 4 HET EDO B 302 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *96(H2 O) HELIX 1 AA1 CYS A 19 ARG A 36 1 18 HELIX 2 AA2 SER A 46 ASN A 51 1 6 HELIX 3 AA3 ASP A 56 THR A 58 5 3 HELIX 4 AA4 GLU A 59 LYS A 67 1 9 HELIX 5 AA5 TRP A 69 GLY A 83 1 15 HELIX 6 AA6 VAL A 86 HIS A 99 1 14 HELIX 7 AA7 ASN A 105 THR A 117 1 13 HELIX 8 AA8 PRO A 120 SER A 129 5 10 HELIX 9 AA9 TYR A 132 MET A 144 1 13 HELIX 10 AB1 ARG A 173 TYR A 190 1 18 HELIX 11 AB2 CYS B 19 ARG B 36 1 18 HELIX 12 AB3 SER B 46 ASN B 51 1 6 HELIX 13 AB4 TRP B 69 GLY B 83 1 15 HELIX 14 AB5 VAL B 86 HIS B 99 1 14 HELIX 15 AB6 ASN B 105 THR B 117 1 13 HELIX 16 AB7 PRO B 120 SER B 129 5 10 HELIX 17 AB8 TYR B 132 ASP B 145 1 14 HELIX 18 AB9 PRO B 146 GLY B 148 5 3 HELIX 19 AC1 ARG B 173 ALA B 189 1 17 SHEET 1 AA1 4 VAL A 38 VAL A 44 0 SHEET 2 AA1 4 TYR A 9 PHE A 15 1 N ALA A 11 O GLU A 39 SHEET 3 AA1 4 THR A 155 VAL A 158 -1 O HIS A 157 N ASP A 12 SHEET 4 AA1 4 VAL A 161 PHE A 164 -1 O VAL A 161 N VAL A 158 SHEET 1 AA2 4 GLU B 39 VAL B 44 0 SHEET 2 AA2 4 GLN B 10 PHE B 15 1 N ALA B 11 O GLU B 39 SHEET 3 AA2 4 THR B 155 VAL B 158 -1 O HIS B 157 N ASP B 12 SHEET 4 AA2 4 VAL B 161 PHE B 164 -1 O PHE B 163 N VAL B 156 CISPEP 1 THR A 153 PRO A 154 0 -3.13 CISPEP 2 GLY A 165 PRO A 166 0 -3.40 CISPEP 3 THR B 153 PRO B 154 0 4.42 CISPEP 4 GLY B 165 PRO B 166 0 4.21 SITE 1 AC1 6 ASP A 12 HIS A 41 HIS A 43 ALA B 81 SITE 2 AC1 6 LEU B 123 HOH B 416 SITE 1 AC2 4 VAL B 44 GLU B 79 SER B 139 EDO B 302 SITE 1 AC3 4 GLY A 160 GLN B 80 EDO B 301 HOH B 432 CRYST1 84.570 84.190 71.710 90.00 113.52 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011825 0.000000 0.005146 0.00000 SCALE2 0.000000 0.011878 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015208 0.00000