HEADER TRANSCRIPTION 22-OCT-14 4WQP TITLE CRYSTAL STRUCTURE OF RORC IN COMPLEX WITH A BENZYL SULFONAMIDE INVERSE TITLE 2 AGONIST COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ROR-GAMMA LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: NUCLEAR RECEPTOR RZR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 COMPND 6 GROUP F MEMBER 3,RAR-RELATED ORPHAN RECEPTOR C,RETINOID-RELATED COMPND 7 ORPHAN RECEPTOR-GAMMA; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: VAL-GLU-ARG-LEU-GLN-ILE-PHE-GLN-HIS-LEU-HIS-PRO-ILE; COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: PROBABLE CLEAVED SECTION OF NUCLEAR RECEPTOR ROR-GAMMA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 GENE: NUCLEAR RECEPTOR ROR-GAMMA; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTOR LIGAND BINDING DOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR G.BOENIG,S.G.HYMOWITZ REVDAT 4 27-DEC-23 4WQP 1 SOURCE REMARK ATOM REVDAT 3 22-APR-15 4WQP 1 JRNL REVDAT 2 15-APR-15 4WQP 1 JRNL REVDAT 1 14-JAN-15 4WQP 0 JRNL AUTH O.RENE,B.P.FAUBER,G.DE LEON BOENIG,B.BURTON,C.EIDENSCHENK, JRNL AUTH 2 C.EVERETT,A.GOBBI,S.G.HYMOWITZ,A.R.JOHNSON,J.R.KIEFER, JRNL AUTH 3 M.LIIMATTA,P.LOCKEY,M.NORMAN,W.OUYANG,H.A.WALLWEBER,H.WONG JRNL TITL MINOR STRUCTURAL CHANGE TO TERTIARY SULFONAMIDE RORC LIGANDS JRNL TITL 2 LED TO OPPOSITE MECHANISMS OF ACTION. JRNL REF ACS MED.CHEM.LETT. V. 6 276 2015 JRNL REFN ISSN 1948-5875 JRNL PMID 25815138 JRNL DOI 10.1021/ML500420Y REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 47215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2561 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 25 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2765 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.1820 REMARK 3 BIN FREE R VALUE SET COUNT : 150 REMARK 3 BIN FREE R VALUE : 0.2310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3832 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.15000 REMARK 3 B22 (A**2) : 7.15000 REMARK 3 B33 (A**2) : -14.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.024 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.023 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.464 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4046 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5467 ; 1.044 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 489 ; 3.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;31.023 ;23.085 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 746 ;13.747 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 35 ;17.863 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 595 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3027 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1893 ; 3.602 ; 3.519 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2367 ; 4.364 ; 7.829 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2153 ; 6.882 ; 4.716 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6360 ;10.182 ;11.340 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.743 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.257 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 265 A 498 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9737 -32.5862 0.4404 REMARK 3 T TENSOR REMARK 3 T11: 0.0756 T22: 0.0279 REMARK 3 T33: 0.0850 T12: -0.0196 REMARK 3 T13: -0.0230 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 3.4267 L22: 1.1475 REMARK 3 L33: 1.4982 L12: -0.3950 REMARK 3 L13: 0.7130 L23: -0.4073 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: 0.1149 S13: -0.0431 REMARK 3 S21: -0.0763 S22: -0.0166 S23: 0.0236 REMARK 3 S31: -0.0003 S32: 0.0054 S33: 0.0417 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 266 B 486 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0756 -29.4947 -34.4493 REMARK 3 T TENSOR REMARK 3 T11: 0.0015 T22: 0.0893 REMARK 3 T33: 0.0828 T12: 0.0081 REMARK 3 T13: 0.0040 T23: -0.0281 REMARK 3 L TENSOR REMARK 3 L11: 1.0021 L22: 3.4902 REMARK 3 L33: 1.4235 L12: 0.7690 REMARK 3 L13: 0.2391 L23: 1.1643 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: -0.0446 S13: 0.0251 REMARK 3 S21: 0.0089 S22: -0.0256 S23: -0.1028 REMARK 3 S31: 0.0222 S32: 0.1025 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 480 P 492 REMARK 3 ORIGIN FOR THE GROUP (A): 24.4044 -36.2230 -17.3107 REMARK 3 T TENSOR REMARK 3 T11: 0.2755 T22: 0.2846 REMARK 3 T33: 0.2577 T12: -0.0508 REMARK 3 T13: -0.0410 T23: 0.1013 REMARK 3 L TENSOR REMARK 3 L11: 12.4284 L22: 6.3128 REMARK 3 L33: 3.1962 L12: -5.2569 REMARK 3 L13: 1.3672 L23: 2.8314 REMARK 3 S TENSOR REMARK 3 S11: 0.0433 S12: -0.0833 S13: -0.3834 REMARK 3 S21: -0.1243 S22: 0.0534 S23: -0.1093 REMARK 3 S31: -0.1938 S32: 0.2016 S33: -0.0968 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4WQP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-OCT-14. REMARK 100 THE DEPOSITION ID IS D_1000204340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979490 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.986 REMARK 200 RESOLUTION RANGE LOW (A) : 40.972 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.62000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 MM TRIS-HCL PH 7.0, 200 MM NACL, 4 REMARK 280 % GLYCEROL, 5 MM DTT, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.20200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.40400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.80300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 108.00500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 21.60100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 49.86750 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -86.37304 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 64.80300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 465 HIS A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 GLY A 253 REMARK 465 GLU A 254 REMARK 465 ASN A 255 REMARK 465 LEU A 256 REMARK 465 TYR A 257 REMARK 465 PHE A 258 REMARK 465 GLN A 259 REMARK 465 GLY A 260 REMARK 465 SER A 261 REMARK 465 ALA A 262 REMARK 465 PRO A 263 REMARK 465 TYR A 264 REMARK 465 PRO A 499 REMARK 465 PRO A 500 REMARK 465 LEU A 501 REMARK 465 TYR A 502 REMARK 465 LYS A 503 REMARK 465 GLU A 504 REMARK 465 LEU A 505 REMARK 465 PHE A 506 REMARK 465 SER A 507 REMARK 465 GLY A 508 REMARK 465 ASN A 509 REMARK 465 SER A 510 REMARK 465 MET B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 HIS B 249 REMARK 465 HIS B 250 REMARK 465 HIS B 251 REMARK 465 HIS B 252 REMARK 465 GLY B 253 REMARK 465 GLU B 254 REMARK 465 ASN B 255 REMARK 465 LEU B 256 REMARK 465 TYR B 257 REMARK 465 PHE B 258 REMARK 465 GLN B 259 REMARK 465 GLY B 260 REMARK 465 SER B 261 REMARK 465 ALA B 262 REMARK 465 PRO B 263 REMARK 465 TYR B 264 REMARK 465 ALA B 265 REMARK 465 GLN B 487 REMARK 465 HIS B 488 REMARK 465 LEU B 489 REMARK 465 HIS B 490 REMARK 465 PRO B 491 REMARK 465 ILE B 492 REMARK 465 VAL B 493 REMARK 465 VAL B 494 REMARK 465 GLN B 495 REMARK 465 ALA B 496 REMARK 465 ALA B 497 REMARK 465 PHE B 498 REMARK 465 PRO B 499 REMARK 465 PRO B 500 REMARK 465 LEU B 501 REMARK 465 TYR B 502 REMARK 465 LYS B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 SER B 507 REMARK 465 GLY B 508 REMARK 465 ASN B 509 REMARK 465 SER B 510 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 286 -61.77 75.47 REMARK 500 GLN B 286 -59.06 73.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 809 DISTANCE = 6.29 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3SX A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3SX B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 602 DBREF 4WQP A 262 507 UNP P51449 RORG_HUMAN 262 507 DBREF 4WQP B 262 507 UNP P51449 RORG_HUMAN 262 507 DBREF 4WQP P 480 492 PDB 4WQP 4WQP 480 492 SEQADV 4WQP MET A 246 UNP P51449 INITIATING METHIONINE SEQADV 4WQP HIS A 247 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS A 248 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS A 249 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS A 250 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS A 251 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS A 252 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY A 253 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLU A 254 UNP P51449 EXPRESSION TAG SEQADV 4WQP ASN A 255 UNP P51449 EXPRESSION TAG SEQADV 4WQP LEU A 256 UNP P51449 EXPRESSION TAG SEQADV 4WQP TYR A 257 UNP P51449 EXPRESSION TAG SEQADV 4WQP PHE A 258 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLN A 259 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY A 260 UNP P51449 EXPRESSION TAG SEQADV 4WQP SER A 261 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY A 508 UNP P51449 EXPRESSION TAG SEQADV 4WQP ASN A 509 UNP P51449 EXPRESSION TAG SEQADV 4WQP SER A 510 UNP P51449 EXPRESSION TAG SEQADV 4WQP MET B 246 UNP P51449 INITIATING METHIONINE SEQADV 4WQP HIS B 247 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS B 248 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS B 249 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS B 250 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS B 251 UNP P51449 EXPRESSION TAG SEQADV 4WQP HIS B 252 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY B 253 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLU B 254 UNP P51449 EXPRESSION TAG SEQADV 4WQP ASN B 255 UNP P51449 EXPRESSION TAG SEQADV 4WQP LEU B 256 UNP P51449 EXPRESSION TAG SEQADV 4WQP TYR B 257 UNP P51449 EXPRESSION TAG SEQADV 4WQP PHE B 258 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLN B 259 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY B 260 UNP P51449 EXPRESSION TAG SEQADV 4WQP SER B 261 UNP P51449 EXPRESSION TAG SEQADV 4WQP GLY B 508 UNP P51449 EXPRESSION TAG SEQADV 4WQP ASN B 509 UNP P51449 EXPRESSION TAG SEQADV 4WQP SER B 510 UNP P51449 EXPRESSION TAG SEQRES 1 A 265 MET HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR PHE SEQRES 2 A 265 GLN GLY SER ALA PRO TYR ALA SER LEU THR GLU ILE GLU SEQRES 3 A 265 HIS LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR SEQRES 4 A 265 CYS GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER SEQRES 5 A 265 ASN ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG SEQRES 6 A 265 LYS SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS SEQRES 7 A 265 LEU THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS SEQRES 8 A 265 ARG LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN SEQRES 9 A 265 ILE VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU SEQRES 10 A 265 VAL ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR SEQRES 11 A 265 VAL PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE SEQRES 12 A 265 ARG ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE SEQRES 13 A 265 ASP PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU SEQRES 14 A 265 ASP GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN SEQRES 15 A 265 ALA HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU SEQRES 16 A 265 GLN LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS SEQRES 17 A 265 LEU CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU SEQRES 18 A 265 PRO PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS SEQRES 19 A 265 VAL GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE SEQRES 20 A 265 VAL VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU SEQRES 21 A 265 PHE SER GLY ASN SER SEQRES 1 B 265 MET HIS HIS HIS HIS HIS HIS GLY GLU ASN LEU TYR PHE SEQRES 2 B 265 GLN GLY SER ALA PRO TYR ALA SER LEU THR GLU ILE GLU SEQRES 3 B 265 HIS LEU VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR SEQRES 4 B 265 CYS GLN LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER SEQRES 5 B 265 ASN ILE PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG SEQRES 6 B 265 LYS SER MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS SEQRES 7 B 265 LEU THR GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS SEQRES 8 B 265 ARG LEU SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN SEQRES 9 B 265 ILE VAL LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU SEQRES 10 B 265 VAL ARG MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR SEQRES 11 B 265 VAL PHE PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE SEQRES 12 B 265 ARG ALA LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE SEQRES 13 B 265 ASP PHE SER HIS SER LEU SER ALA LEU HIS PHE SER GLU SEQRES 14 B 265 ASP GLU ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN SEQRES 15 B 265 ALA HIS ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU SEQRES 16 B 265 GLN LEU GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS SEQRES 17 B 265 LEU CYS LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU SEQRES 18 B 265 PRO PRO LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS SEQRES 19 B 265 VAL GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE SEQRES 20 B 265 VAL VAL GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU SEQRES 21 B 265 PHE SER GLY ASN SER SEQRES 1 P 13 VAL GLU ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE HET 3SX A 601 31 HET SO4 A 602 5 HET 3SX B 601 31 HET SO4 B 602 5 HETNAM 3SX N-[4-(4-ACETYLPIPERAZIN-1-YL)BENZYL]-N-(2- HETNAM 2 3SX METHYLPROPYL)-1-PHENYLMETHANESULFONAMIDE HETNAM SO4 SULFATE ION FORMUL 4 3SX 2(C24 H33 N3 O3 S) FORMUL 5 SO4 2(O4 S 2-) FORMUL 8 HOH *251(H2 O) HELIX 1 AA1 SER A 266 CYS A 285 1 20 HELIX 2 AA2 ARG A 288 GLN A 295 1 8 HELIX 3 AA3 ARG A 296 ASN A 298 5 3 HELIX 4 AA4 SER A 301 LYS A 311 1 11 HELIX 5 AA5 SER A 312 LEU A 338 1 27 HELIX 6 AA6 GLY A 340 LEU A 344 5 5 HELIX 7 AA7 CYS A 345 MET A 365 1 21 HELIX 8 AA8 GLY A 384 GLY A 392 5 9 HELIX 9 AA9 CYS A 393 ALA A 409 1 17 HELIX 10 AB1 SER A 413 ILE A 426 1 14 HELIX 11 AB2 GLU A 435 THR A 457 1 23 HELIX 12 AB3 ARG A 459 LEU A 466 5 8 HELIX 13 AB4 PRO A 468 HIS A 490 1 23 HELIX 14 AB5 LEU B 267 CYS B 285 1 19 HELIX 15 AB6 ARG B 288 GLN B 295 1 8 HELIX 16 AB7 ARG B 296 ASN B 298 5 3 HELIX 17 AB8 SER B 301 LYS B 311 1 11 HELIX 18 AB9 SER B 312 ARG B 337 1 26 HELIX 19 AC1 CYS B 345 MET B 365 1 21 HELIX 20 AC2 GLY B 384 GLY B 392 5 9 HELIX 21 AC3 CYS B 393 ALA B 409 1 17 HELIX 22 AC4 SER B 413 ILE B 426 1 14 HELIX 23 AC5 GLU B 435 THR B 457 1 23 HELIX 24 AC6 ARG B 459 LEU B 466 5 8 HELIX 25 AC7 GLY B 470 PHE B 486 1 17 HELIX 26 AC8 GLU P 481 HIS P 490 1 10 SHEET 1 AA1 3 TYR A 369 ASN A 370 0 SHEET 2 AA1 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 AA1 3 LYS A 381 GLY A 383 -1 O LYS A 381 N PHE A 378 SHEET 1 AA2 3 TYR B 369 ASN B 370 0 SHEET 2 AA2 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 AA2 3 LYS B 381 GLY B 383 -1 O LYS B 381 N PHE B 378 SITE 1 AC1 15 GLN A 286 LEU A 287 CYS A 320 LEU A 324 SITE 2 AC1 15 MET A 365 ALA A 368 PHE A 377 PHE A 378 SITE 3 AC1 15 PHE A 388 ILE A 397 PHE A 401 HIS A 479 SITE 4 AC1 15 LEU A 483 SO4 A 602 HOH A 751 SITE 1 AC2 7 HIS A 323 PHE A 377 PHE A 378 GLU A 379 SITE 2 AC2 7 3SX A 601 HOH A 782 HOH A 812 SITE 1 AC3 16 GLN B 286 LEU B 287 CYS B 320 LEU B 324 SITE 2 AC3 16 MET B 365 ALA B 368 PHE B 377 PHE B 378 SITE 3 AC3 16 PHE B 388 LEU B 391 LEU B 396 PHE B 401 SITE 4 AC3 16 HIS B 479 LEU B 483 SO4 B 602 HOH B 768 SITE 1 AC4 9 HIS B 323 PHE B 377 PHE B 378 GLU B 379 SITE 2 AC4 9 3SX B 601 HOH B 741 HOH B 774 HOH B 802 SITE 3 AC4 9 HOH B 813 CRYST1 99.735 99.735 129.606 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010027 0.005789 0.000000 0.00000 SCALE2 0.000000 0.011578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007716 0.00000