HEADER HYDROLASE 30-OCT-14 4WU0 TITLE STRUCTURAL ANALYSIS OF C. ACETOBUTYLICUM ATCC 824 GLYCOSIDE HYDROLASE TITLE 2 FROM FAMILY 105 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIMILAR TO YTER (BACILUS SUBTILIS); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM; SOURCE 3 ORGANISM_TAXID: 272562; SOURCE 4 STRAIN: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787; SOURCE 5 ATCC: 824; SOURCE 6 GENE: CA_C0359; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PTXB1 KEYWDS PECTIN, RHAMNOGALACTURONAN, UNSATURATED RHAMNOGALACTURONAN HYDROLASE, KEYWDS 2 GLYCOSIDE HYDROLASE, YTER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.GERMANE,M.D.SERVINSKY,E.S.GERLACH,C.J.SUND,M.M.HURLEY REVDAT 4 27-SEP-23 4WU0 1 REMARK REVDAT 3 26-AUG-15 4WU0 1 JRNL REMARK REVDAT 2 12-AUG-15 4WU0 1 JRNL REVDAT 1 08-JUL-15 4WU0 0 JRNL AUTH K.L.GERMANE,M.D.SERVINSKY,E.S.GERLACH,C.J.SUND,M.M.HURLEY JRNL TITL STRUCTURAL ANALYSIS OF CLOSTRIDIUM ACETOBUTYLICUM ATCC 824 JRNL TITL 2 GLYCOSIDE HYDROLASE FROM CAZY FAMILY GH105. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 71 1100 2015 JRNL REFN ESSN 2053-230X JRNL PMID 26249707 JRNL DOI 10.1107/S2053230X15012121 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 103657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.138 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.163 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 5177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.9358 - 4.9514 1.00 3540 175 0.1912 0.1817 REMARK 3 2 4.9514 - 3.9400 1.00 3376 187 0.1294 0.1369 REMARK 3 3 3.9400 - 3.4448 1.00 3358 179 0.1267 0.1487 REMARK 3 4 3.4448 - 3.1312 1.00 3329 179 0.1374 0.1640 REMARK 3 5 3.1312 - 2.9075 1.00 3338 160 0.1335 0.1696 REMARK 3 6 2.9075 - 2.7365 1.00 3343 158 0.1250 0.1574 REMARK 3 7 2.7365 - 2.5998 1.00 3327 149 0.1203 0.1535 REMARK 3 8 2.5998 - 2.4868 1.00 3319 158 0.1217 0.1505 REMARK 3 9 2.4868 - 2.3913 1.00 3295 155 0.1194 0.1470 REMARK 3 10 2.3913 - 2.3089 1.00 3257 183 0.1142 0.1411 REMARK 3 11 2.3089 - 2.2368 1.00 3269 185 0.1114 0.1477 REMARK 3 12 2.2368 - 2.1729 1.00 3304 170 0.1139 0.1448 REMARK 3 13 2.1729 - 2.1158 1.00 3266 161 0.1173 0.1459 REMARK 3 14 2.1158 - 2.0642 1.00 3288 162 0.1177 0.1619 REMARK 3 15 2.0642 - 2.0173 1.00 3297 161 0.1217 0.1465 REMARK 3 16 2.0173 - 1.9744 1.00 3231 175 0.1262 0.1732 REMARK 3 17 1.9744 - 1.9350 1.00 3286 186 0.1345 0.1665 REMARK 3 18 1.9350 - 1.8985 1.00 3231 186 0.1338 0.1757 REMARK 3 19 1.8985 - 1.8646 1.00 3259 167 0.1341 0.1562 REMARK 3 20 1.8646 - 1.8330 1.00 3263 164 0.1376 0.1970 REMARK 3 21 1.8330 - 1.8035 1.00 3245 201 0.1448 0.1892 REMARK 3 22 1.8035 - 1.7758 1.00 3213 176 0.1467 0.1672 REMARK 3 23 1.7758 - 1.7497 1.00 3283 190 0.1528 0.1814 REMARK 3 24 1.7497 - 1.7250 1.00 3184 201 0.1610 0.1943 REMARK 3 25 1.7250 - 1.7017 1.00 3277 153 0.1659 0.2202 REMARK 3 26 1.7017 - 1.6796 1.00 3237 186 0.1750 0.2340 REMARK 3 27 1.6796 - 1.6586 0.99 3204 178 0.1823 0.2040 REMARK 3 28 1.6586 - 1.6387 1.00 3241 176 0.1906 0.2323 REMARK 3 29 1.6387 - 1.6196 1.00 3253 160 0.1962 0.2591 REMARK 3 30 1.6196 - 1.6000 0.97 3165 156 0.1944 0.2248 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6012 REMARK 3 ANGLE : 1.225 8122 REMARK 3 CHIRALITY : 0.074 868 REMARK 3 PLANARITY : 0.007 1020 REMARK 3 DIHEDRAL : 13.114 2224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4090 56.8941 26.4825 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.1316 REMARK 3 T33: 0.1484 T12: -0.0051 REMARK 3 T13: -0.0033 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.9335 L22: 1.3110 REMARK 3 L33: 1.6797 L12: 0.4406 REMARK 3 L13: 0.2550 L23: 0.3042 REMARK 3 S TENSOR REMARK 3 S11: -0.0168 S12: -0.0287 S13: 0.1418 REMARK 3 S21: 0.0139 S22: 0.0748 S23: -0.0087 REMARK 3 S31: -0.1360 S32: 0.0700 S33: -0.0434 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 42:73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5809 57.6678 26.5805 REMARK 3 T TENSOR REMARK 3 T11: 0.1595 T22: 0.1956 REMARK 3 T33: 0.1794 T12: 0.0246 REMARK 3 T13: 0.0051 T23: 0.0449 REMARK 3 L TENSOR REMARK 3 L11: 2.4805 L22: 2.3109 REMARK 3 L33: 1.2204 L12: 0.4155 REMARK 3 L13: 0.0177 L23: 0.0074 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: 0.0242 S13: 0.4242 REMARK 3 S21: -0.0717 S22: 0.0855 S23: 0.3067 REMARK 3 S31: -0.1954 S32: -0.2506 S33: 0.0152 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 74:117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8993 46.8175 30.5103 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1871 REMARK 3 T33: 0.1605 T12: -0.0018 REMARK 3 T13: 0.0054 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 1.8248 L22: 2.5887 REMARK 3 L33: 1.5116 L12: 0.5688 REMARK 3 L13: -0.1399 L23: 0.6859 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: -0.0900 S13: 0.1116 REMARK 3 S21: 0.1173 S22: -0.0527 S23: 0.2656 REMARK 3 S31: 0.0247 S32: -0.1929 S33: 0.0497 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 118:198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2233 32.3252 24.3762 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.1478 REMARK 3 T33: 0.1717 T12: -0.0337 REMARK 3 T13: 0.0054 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 0.9837 L22: 0.9551 REMARK 3 L33: 1.5706 L12: -0.1941 REMARK 3 L13: -0.4693 L23: 0.3441 REMARK 3 S TENSOR REMARK 3 S11: -0.0752 S12: 0.0147 S13: -0.1198 REMARK 3 S21: -0.0080 S22: 0.0178 S23: 0.0678 REMARK 3 S31: 0.2080 S32: -0.1269 S33: 0.0651 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 199:240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1241 33.9056 33.7322 REMARK 3 T TENSOR REMARK 3 T11: 0.1589 T22: 0.1639 REMARK 3 T33: 0.1362 T12: 0.0006 REMARK 3 T13: -0.0039 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 1.6900 L22: 0.8497 REMARK 3 L33: 1.9760 L12: 0.0804 REMARK 3 L13: -1.0419 L23: -0.2386 REMARK 3 S TENSOR REMARK 3 S11: -0.0932 S12: -0.2039 S13: -0.1325 REMARK 3 S21: 0.0578 S22: 0.0607 S23: 0.0453 REMARK 3 S31: 0.1702 S32: 0.0592 S33: 0.0101 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 241:305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.5038 40.1650 25.3002 REMARK 3 T TENSOR REMARK 3 T11: 0.1123 T22: 0.1643 REMARK 3 T33: 0.1402 T12: 0.0177 REMARK 3 T13: -0.0057 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.1685 L22: 0.7714 REMARK 3 L33: 1.8254 L12: 0.0912 REMARK 3 L13: -0.3084 L23: -0.4369 REMARK 3 S TENSOR REMARK 3 S11: -0.0469 S12: -0.0755 S13: -0.0118 REMARK 3 S21: 0.0447 S22: 0.0232 S23: -0.1220 REMARK 3 S31: 0.0839 S32: 0.2308 S33: 0.0270 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 306:328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.2353 48.5156 13.2553 REMARK 3 T TENSOR REMARK 3 T11: 0.1618 T22: 0.1486 REMARK 3 T33: 0.1066 T12: -0.0147 REMARK 3 T13: -0.0047 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 3.1716 L22: 5.0863 REMARK 3 L33: 1.7928 L12: 2.8302 REMARK 3 L13: 1.0401 L23: 1.8812 REMARK 3 S TENSOR REMARK 3 S11: -0.1438 S12: 0.0422 S13: 0.1452 REMARK 3 S21: -0.2348 S22: 0.0534 S23: 0.1620 REMARK 3 S31: -0.1119 S32: 0.0335 S33: 0.1002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN A AND RESID 329:361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.3095 45.5445 20.3478 REMARK 3 T TENSOR REMARK 3 T11: 0.1458 T22: 0.1504 REMARK 3 T33: 0.1313 T12: -0.0162 REMARK 3 T13: 0.0042 T23: 0.0286 REMARK 3 L TENSOR REMARK 3 L11: 0.7023 L22: 0.9757 REMARK 3 L33: 0.9587 L12: 0.0027 REMARK 3 L13: 0.1316 L23: 0.3954 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: -0.0554 S13: 0.0159 REMARK 3 S21: 0.0334 S22: 0.0389 S23: -0.0105 REMARK 3 S31: 0.0360 S32: 0.0107 S33: 0.0204 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3118 44.0618 -12.6374 REMARK 3 T TENSOR REMARK 3 T11: 0.1494 T22: 0.1429 REMARK 3 T33: 0.1479 T12: -0.0216 REMARK 3 T13: -0.0139 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 1.1837 L22: 2.8554 REMARK 3 L33: 2.1539 L12: 0.0050 REMARK 3 L13: 0.0923 L23: 0.6289 REMARK 3 S TENSOR REMARK 3 S11: 0.0503 S12: 0.0679 S13: -0.1512 REMARK 3 S21: 0.0133 S22: 0.0131 S23: -0.0054 REMARK 3 S31: 0.2191 S32: -0.0723 S33: -0.0483 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 42:73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.2771 54.8670 -17.3786 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.2097 REMARK 3 T33: 0.1240 T12: -0.0021 REMARK 3 T13: -0.0067 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 1.6945 L22: 3.2427 REMARK 3 L33: 1.2790 L12: -0.1276 REMARK 3 L13: 0.2540 L23: 0.2339 REMARK 3 S TENSOR REMARK 3 S11: 0.1267 S12: 0.0836 S13: -0.0605 REMARK 3 S21: -0.1323 S22: -0.2361 S23: 0.3164 REMARK 3 S31: 0.0357 S32: -0.2842 S33: 0.1060 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 74:148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8973 63.6268 -18.1659 REMARK 3 T TENSOR REMARK 3 T11: 0.1473 T22: 0.1548 REMARK 3 T33: 0.1336 T12: 0.0087 REMARK 3 T13: 0.0019 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.3374 L22: 1.3770 REMARK 3 L33: 1.4083 L12: 0.6157 REMARK 3 L13: 0.5903 L23: 0.7363 REMARK 3 S TENSOR REMARK 3 S11: -0.0077 S12: 0.1355 S13: 0.0608 REMARK 3 S21: -0.1040 S22: 0.0090 S23: 0.1118 REMARK 3 S31: -0.0584 S32: -0.0437 S33: 0.0010 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 149:222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1082 63.3495 -10.4877 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1213 REMARK 3 T33: 0.1428 T12: -0.0065 REMARK 3 T13: 0.0054 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.7410 L22: 0.9447 REMARK 3 L33: 1.5472 L12: 0.0036 REMARK 3 L13: -0.3345 L23: 0.3341 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: 0.0405 S13: 0.0071 REMARK 3 S21: -0.0246 S22: 0.0402 S23: -0.0941 REMARK 3 S31: -0.1071 S32: 0.0153 S33: -0.0657 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN B AND RESID 223:240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.3970 54.0797 -13.2824 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.1480 REMARK 3 T33: 0.1914 T12: -0.0002 REMARK 3 T13: 0.0169 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 1.1789 L22: 2.2845 REMARK 3 L33: 7.5656 L12: -0.9103 REMARK 3 L13: 1.6321 L23: -2.9617 REMARK 3 S TENSOR REMARK 3 S11: -0.0208 S12: 0.0766 S13: -0.0593 REMARK 3 S21: 0.0143 S22: -0.0537 S23: -0.2420 REMARK 3 S31: -0.0628 S32: 0.3818 S33: 0.0830 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND RESID 241:361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.8796 46.0618 -3.5185 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.0941 REMARK 3 T33: 0.1257 T12: 0.0071 REMARK 3 T13: -0.0079 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.7796 L22: 1.0032 REMARK 3 L33: 1.1972 L12: 0.1372 REMARK 3 L13: -0.0949 L23: 0.3000 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: 0.0089 S13: -0.1076 REMARK 3 S21: 0.0448 S22: 0.0163 S23: -0.0870 REMARK 3 S31: 0.1679 S32: 0.0549 S33: -0.0229 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WU0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.75 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103657 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.3450 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.61100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.511 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1NC5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 16% W/V POLYETHYLENE REMARK 280 GLYCOL 4,000, PH 7.75, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.64550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.35850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.80050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.35850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.64550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.80050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 401 O HOH B 409 2.06 REMARK 500 O HOH A 443 O HOH A 723 2.06 REMARK 500 O HOH B 486 O HOH B 720 2.07 REMARK 500 O HOH B 589 O HOH B 789 2.09 REMARK 500 O HOH A 483 O HOH A 712 2.10 REMARK 500 O HOH B 547 O HOH B 771 2.11 REMARK 500 O HOH A 473 O HOH A 544 2.12 REMARK 500 O HOH A 586 O HOH B 641 2.12 REMARK 500 O HOH B 484 O HOH B 695 2.14 REMARK 500 O HOH B 419 O HOH B 737 2.14 REMARK 500 O HOH A 671 O HOH A 708 2.15 REMARK 500 OE1 GLU A 93 O HOH A 401 2.15 REMARK 500 O HOH A 685 O HOH A 780 2.15 REMARK 500 O HOH A 429 O HOH A 632 2.17 REMARK 500 O HOH A 401 O HOH A 405 2.17 REMARK 500 OE2 GLU A 148 O HOH A 402 2.17 REMARK 500 O HOH A 473 O HOH A 582 2.18 REMARK 500 O HOH B 567 O HOH B 735 2.18 REMARK 500 O HOH B 624 O HOH B 759 2.19 REMARK 500 OXT LEU A 361 O HOH A 403 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 783 O HOH B 824 4465 2.18 REMARK 500 O HOH A 402 O HOH B 649 2565 2.18 REMARK 500 O HOH A 748 O HOH B 772 4465 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET B 269 CB MET B 269 CG -0.208 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 247 -166.11 -121.44 REMARK 500 LYS B 42 19.93 57.24 REMARK 500 VAL B 247 -164.91 -118.88 REMARK 500 LYS B 315 42.90 70.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 805 DISTANCE = 5.81 ANGSTROMS DBREF 4WU0 A 1 361 UNP Q97M41 Q97M41_CLOAB 1 361 DBREF 4WU0 B 1 361 UNP Q97M41 Q97M41_CLOAB 1 361 SEQRES 1 A 361 MET GLN LYS TYR SER LYS LEU MET ALA ASP SER ILE ILE SEQRES 2 A 361 ALA LYS ASN ILE THR LEU THR ASP HIS TRP GLY TYR GLU SEQRES 3 A 361 TYR GLY LEU THR LEU ASP GLY ILE ALA LYS VAL TYR GLU SEQRES 4 A 361 TRP THR LYS ASP LYS LYS TYR LEU ASP PHE ILE ILE LYS SEQRES 5 A 361 THR MET ASP THR PHE ILE ASN GLU ASP GLY THR ILE ASN SEQRES 6 A 361 GLY TYR LYS LEU GLU GLU TYR ASN ILE ASP HIS LEU ASN SEQRES 7 A 361 ASN GLY LYS ILE LEU ILE THR LEU PHE LYS GLU THR GLY SEQRES 8 A 361 LYS GLU LYS TYR ARG LYS ALA LEU ILE ASN LEU ARG LYS SEQRES 9 A 361 GLN ILE ASP ASN HIS PRO ARG THR LYS GLU ASN VAL PHE SEQRES 10 A 361 TRP HIS LYS ASN ILE TYR PRO HIS GLN ILE TRP LEU ASP SEQRES 11 A 361 GLY LEU TYR MET GLY ALA THR PHE TYR ALA LYS TYR VAL SEQRES 12 A 361 LYS GLU PHE GLY GLU GLU LYS GLU PHE ASP ASP ILE THR SEQRES 13 A 361 HIS GLN PHE ILE ILE THR GLU LYS ASN LEU LYS ASP ASN SEQRES 14 A 361 LYS THR GLY LEU LEU TYR HIS ALA TYR ASP GLU SER LYS SEQRES 15 A 361 THR GLU PRO TRP SER ASN SER GLU THR GLY LEU SER PRO SEQRES 16 A 361 HIS PHE TRP GLY ARG ALA MET GLY TRP TYR VAL MET ALA SEQRES 17 A 361 LEU ALA ASP THR ILE GLU VAL LEU PRO LYS ASN HIS LYS SEQRES 18 A 361 ASP ARG ASN ALA LEU ILE LYS ILE LEU ASN ASN CYS VAL SEQRES 19 A 361 THR ALA LEU LEU LYS VAL GLN ASP ASN ALA SER LYS VAL SEQRES 20 A 361 TRP TYR GLN VAL LEU ASP GLU GLY GLU ARG LYS GLY ASN SEQRES 21 A 361 TYR LEU GLU ALA SER GLY SER SER MET ILE VAL TYR ALA SEQRES 22 A 361 LEU LEU LYS GLY VAL ARG LEU GLY TYR LEU PRO GLU SER SEQRES 23 A 361 LEU LYS GLU THR ALA LYS GLU ALA TYR LYS GLY LEU ILE SEQRES 24 A 361 ASN GLU PHE ILE LEU GLU THR LYS ASP GLY LEU ILE ASN SEQRES 25 A 361 LEU ASN LYS ILE CYS TYR VAL ALA GLY LEU GLY GLY LYS SEQRES 26 A 361 ASP LYS ARG ASP GLY SER PHE ALA TYR TYR ILE SER GLU SEQRES 27 A 361 PRO ILE VAL SER ASN GLU PRO LYS GLY LEU GLY PRO PHE SEQRES 28 A 361 LEU LEU ALA SER TYR GLU TYR GLU THR LEU SEQRES 1 B 361 MET GLN LYS TYR SER LYS LEU MET ALA ASP SER ILE ILE SEQRES 2 B 361 ALA LYS ASN ILE THR LEU THR ASP HIS TRP GLY TYR GLU SEQRES 3 B 361 TYR GLY LEU THR LEU ASP GLY ILE ALA LYS VAL TYR GLU SEQRES 4 B 361 TRP THR LYS ASP LYS LYS TYR LEU ASP PHE ILE ILE LYS SEQRES 5 B 361 THR MET ASP THR PHE ILE ASN GLU ASP GLY THR ILE ASN SEQRES 6 B 361 GLY TYR LYS LEU GLU GLU TYR ASN ILE ASP HIS LEU ASN SEQRES 7 B 361 ASN GLY LYS ILE LEU ILE THR LEU PHE LYS GLU THR GLY SEQRES 8 B 361 LYS GLU LYS TYR ARG LYS ALA LEU ILE ASN LEU ARG LYS SEQRES 9 B 361 GLN ILE ASP ASN HIS PRO ARG THR LYS GLU ASN VAL PHE SEQRES 10 B 361 TRP HIS LYS ASN ILE TYR PRO HIS GLN ILE TRP LEU ASP SEQRES 11 B 361 GLY LEU TYR MET GLY ALA THR PHE TYR ALA LYS TYR VAL SEQRES 12 B 361 LYS GLU PHE GLY GLU GLU LYS GLU PHE ASP ASP ILE THR SEQRES 13 B 361 HIS GLN PHE ILE ILE THR GLU LYS ASN LEU LYS ASP ASN SEQRES 14 B 361 LYS THR GLY LEU LEU TYR HIS ALA TYR ASP GLU SER LYS SEQRES 15 B 361 THR GLU PRO TRP SER ASN SER GLU THR GLY LEU SER PRO SEQRES 16 B 361 HIS PHE TRP GLY ARG ALA MET GLY TRP TYR VAL MET ALA SEQRES 17 B 361 LEU ALA ASP THR ILE GLU VAL LEU PRO LYS ASN HIS LYS SEQRES 18 B 361 ASP ARG ASN ALA LEU ILE LYS ILE LEU ASN ASN CYS VAL SEQRES 19 B 361 THR ALA LEU LEU LYS VAL GLN ASP ASN ALA SER LYS VAL SEQRES 20 B 361 TRP TYR GLN VAL LEU ASP GLU GLY GLU ARG LYS GLY ASN SEQRES 21 B 361 TYR LEU GLU ALA SER GLY SER SER MET ILE VAL TYR ALA SEQRES 22 B 361 LEU LEU LYS GLY VAL ARG LEU GLY TYR LEU PRO GLU SER SEQRES 23 B 361 LEU LYS GLU THR ALA LYS GLU ALA TYR LYS GLY LEU ILE SEQRES 24 B 361 ASN GLU PHE ILE LEU GLU THR LYS ASP GLY LEU ILE ASN SEQRES 25 B 361 LEU ASN LYS ILE CYS TYR VAL ALA GLY LEU GLY GLY LYS SEQRES 26 B 361 ASP LYS ARG ASP GLY SER PHE ALA TYR TYR ILE SER GLU SEQRES 27 B 361 PRO ILE VAL SER ASN GLU PRO LYS GLY LEU GLY PRO PHE SEQRES 28 B 361 LEU LEU ALA SER TYR GLU TYR GLU THR LEU FORMUL 3 HOH *835(H2 O) HELIX 1 AA1 LYS A 3 LYS A 15 1 13 HELIX 2 AA2 GLY A 24 LYS A 42 1 19 HELIX 3 AA3 ASP A 43 ASP A 55 1 13 HELIX 4 AA4 LYS A 68 TYR A 72 5 5 HELIX 5 AA5 ASN A 73 ASN A 78 5 6 HELIX 6 AA6 ASN A 79 GLY A 91 1 13 HELIX 7 AA7 LYS A 92 HIS A 109 1 18 HELIX 8 AA8 LEU A 129 GLY A 135 1 7 HELIX 9 AA9 GLY A 135 GLY A 147 1 13 HELIX 10 AB1 GLU A 148 LYS A 150 5 3 HELIX 11 AB2 GLU A 151 LYS A 167 1 17 HELIX 12 AB3 TRP A 198 LEU A 216 1 19 HELIX 13 AB4 ASP A 222 GLN A 241 1 20 HELIX 14 AB5 GLU A 263 LEU A 280 1 18 HELIX 15 AB6 PRO A 284 SER A 286 5 3 HELIX 16 AB7 LEU A 287 PHE A 302 1 16 HELIX 17 AB8 SER A 331 GLU A 338 1 8 HELIX 18 AB9 GLU A 344 LEU A 361 1 18 HELIX 19 AC1 LYS B 3 LYS B 15 1 13 HELIX 20 AC2 GLY B 24 LYS B 42 1 19 HELIX 21 AC3 ASP B 43 ASP B 55 1 13 HELIX 22 AC4 LYS B 68 TYR B 72 5 5 HELIX 23 AC5 ASN B 73 ASN B 78 5 6 HELIX 24 AC6 ASN B 79 GLY B 91 1 13 HELIX 25 AC7 LYS B 92 HIS B 109 1 18 HELIX 26 AC8 LEU B 129 GLY B 135 1 7 HELIX 27 AC9 GLY B 135 GLY B 147 1 13 HELIX 28 AD1 LYS B 150 LYS B 167 1 18 HELIX 29 AD2 TRP B 198 LEU B 216 1 19 HELIX 30 AD3 ASP B 222 GLN B 241 1 20 HELIX 31 AD4 GLU B 263 LEU B 280 1 18 HELIX 32 AD5 PRO B 284 SER B 286 5 3 HELIX 33 AD6 LEU B 287 PHE B 302 1 16 HELIX 34 AD7 SER B 331 GLU B 338 1 8 HELIX 35 AD8 GLU B 344 LEU B 361 1 18 SHEET 1 AA1 2 GLN A 126 TRP A 128 0 SHEET 2 AA1 2 ALA A 177 ASP A 179 -1 O TYR A 178 N ILE A 127 SHEET 1 AA2 2 ILE A 303 GLU A 305 0 SHEET 2 AA2 2 ILE A 311 LEU A 313 -1 O ASN A 312 N LEU A 304 SHEET 1 AA3 2 ILE A 316 CYS A 317 0 SHEET 2 AA3 2 ILE A 340 VAL A 341 -1 O VAL A 341 N ILE A 316 SHEET 1 AA4 2 GLN B 126 TRP B 128 0 SHEET 2 AA4 2 ALA B 177 ASP B 179 -1 O TYR B 178 N ILE B 127 SHEET 1 AA5 2 ILE B 303 GLU B 305 0 SHEET 2 AA5 2 ILE B 311 LEU B 313 -1 O ASN B 312 N LEU B 304 SHEET 1 AA6 2 ILE B 316 CYS B 317 0 SHEET 2 AA6 2 ILE B 340 VAL B 341 -1 O VAL B 341 N ILE B 316 CRYST1 53.291 93.601 156.717 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018765 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010684 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006381 0.00000