data_4WVU
#
_entry.id 4WVU
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.381
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 4WVU pdb_00004wvu 10.2210/pdb4wvu/pdb
WWPDB D_1000204600 ? ?
#
loop_
_pdbx_database_related.content_type
_pdbx_database_related.db_id
_pdbx_database_related.db_name
_pdbx_database_related.details
unspecified 4WVS PDB .
unspecified 4WVT PDB .
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 4WVU
_pdbx_database_status.recvd_initial_deposition_date 2014-11-07
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.pdb_format_compatible Y
#
_audit_author.name 'Pokross, M.E.'
_audit_author.pdbx_ordinal 1
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev J.Med.Chem.
_citation.journal_id_ASTM JMCMAR
_citation.journal_id_CSD 0151
_citation.journal_id_ISSN 0022-2623
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 58
_citation.language ?
_citation.page_first 2855
_citation.page_last 2861
_citation.title
;The Discovery of Macrocyclic XIAP Antagonists from a DNA-Programmed Chemistry Library, and Their Optimization To Give Lead Compounds with in Vivo Antitumor Activity.
;
_citation.year 2015
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1021/jm501892g
_citation.pdbx_database_id_PubMed 25695766
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Seigal, B.A.' 1 ?
primary 'Connors, W.H.' 2 ?
primary 'Fraley, A.' 3 ?
primary 'Borzilleri, R.M.' 4 ?
primary 'Carter, P.H.' 5 ?
primary 'Emanuel, S.L.' 6 ?
primary 'Fargnoli, J.' 7 ?
primary 'Kim, K.' 8 ?
primary 'Lei, M.' 9 ?
primary 'Naglich, J.G.' 10 ?
primary 'Pokross, M.E.' 11 ?
primary 'Posy, S.L.' 12 ?
primary 'Shen, H.' 13 ?
primary 'Surti, N.' 14 ?
primary 'Talbott, R.' 15 ?
primary 'Zhang, Y.' 16 ?
primary 'Terrett, N.K.' 17 ?
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 95.51
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 4WVU
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 28.261
_cell.length_a_esd ?
_cell.length_b 39.328
_cell.length_b_esd ?
_cell.length_c 33.058
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB 2
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 4WVU
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 4
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1 21 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'E3 ubiquitin-protein ligase XIAP' 11359.649 1 6.3.2.- 'C202A, C213G' ? ?
2 polymer syn '3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM' 747.841 1 ? ? ? ?
3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ?
4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ?
5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ?
6 water nat water 18.015 80 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name
;Baculoviral IAP repeat-containing protein 4,IAP-like protein,hILP,Inhibitor of apoptosis protein 3,hIAP3,X-linked inhibitor of apoptosis protein,X-linked IAP
;
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;MGSSHHHHHHSSGETVRFQGHMRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFACGGKLKNWEPG
DRAWSEHRRHFPNCFFVL
;
;MGSSHHHHHHSSGETVRFQGHMRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFACGGKLKNWEPG
DRAWSEHRRHFPNCFFVL
;
A ?
2 'polypeptide(L)' no yes '(MAA)V(3V8)F(HOX)'
AVXFX B ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 GLY n
1 3 SER n
1 4 SER n
1 5 HIS n
1 6 HIS n
1 7 HIS n
1 8 HIS n
1 9 HIS n
1 10 HIS n
1 11 SER n
1 12 SER n
1 13 GLY n
1 14 GLU n
1 15 THR n
1 16 VAL n
1 17 ARG n
1 18 PHE n
1 19 GLN n
1 20 GLY n
1 21 HIS n
1 22 MET n
1 23 ARG n
1 24 ASN n
1 25 PRO n
1 26 ALA n
1 27 MET n
1 28 TYR n
1 29 SER n
1 30 GLU n
1 31 GLU n
1 32 ALA n
1 33 ARG n
1 34 LEU n
1 35 LYS n
1 36 SER n
1 37 PHE n
1 38 GLN n
1 39 ASN n
1 40 TRP n
1 41 PRO n
1 42 ASP n
1 43 TYR n
1 44 ALA n
1 45 HIS n
1 46 LEU n
1 47 THR n
1 48 PRO n
1 49 ARG n
1 50 GLU n
1 51 LEU n
1 52 ALA n
1 53 SER n
1 54 ALA n
1 55 GLY n
1 56 LEU n
1 57 TYR n
1 58 TYR n
1 59 THR n
1 60 GLY n
1 61 ILE n
1 62 GLY n
1 63 ASP n
1 64 GLN n
1 65 VAL n
1 66 GLN n
1 67 CYS n
1 68 PHE n
1 69 ALA n
1 70 CYS n
1 71 GLY n
1 72 GLY n
1 73 LYS n
1 74 LEU n
1 75 LYS n
1 76 ASN n
1 77 TRP n
1 78 GLU n
1 79 PRO n
1 80 GLY n
1 81 ASP n
1 82 ARG n
1 83 ALA n
1 84 TRP n
1 85 SER n
1 86 GLU n
1 87 HIS n
1 88 ARG n
1 89 ARG n
1 90 HIS n
1 91 PHE n
1 92 PRO n
1 93 ASN n
1 94 CYS n
1 95 PHE n
1 96 PHE n
1 97 VAL n
1 98 LEU n
2 1 MAA n
2 2 VAL n
2 3 3V8 n
2 4 PHE n
2 5 HOX n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 98
_entity_src_gen.gene_src_common_name Human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'XIAP, API3, BIRC4, IAP3'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type Plasmid
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name pET28
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_pdbx_entity_src_syn.entity_id 2
_pdbx_entity_src_syn.pdbx_src_id 1
_pdbx_entity_src_syn.pdbx_alt_source_flag sample
_pdbx_entity_src_syn.pdbx_beg_seq_num 1
_pdbx_entity_src_syn.pdbx_end_seq_num 5
_pdbx_entity_src_syn.organism_scientific ?
_pdbx_entity_src_syn.organism_common_name ?
_pdbx_entity_src_syn.ncbi_taxonomy_id ?
_pdbx_entity_src_syn.details ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
1 UNP XIAP_HUMAN P98170 ? 1 RNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL 156
2 PDB 4WVU 4WVU ? 2 ? 1
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 4WVU A 23 ? 98 ? P98170 156 ? 231 ? 156 231
2 2 4WVU B 1 ? 5 ? 4WVU 1 ? 5 ? 1 5
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 4WVU MET A 1 ? UNP P98170 ? ? 'initiating methionine' -22 1
1 4WVU GLY A 2 ? UNP P98170 ? ? 'expression tag' -21 2
1 4WVU SER A 3 ? UNP P98170 ? ? 'expression tag' -20 3
1 4WVU SER A 4 ? UNP P98170 ? ? 'expression tag' -19 4
1 4WVU HIS A 5 ? UNP P98170 ? ? 'expression tag' -18 5
1 4WVU HIS A 6 ? UNP P98170 ? ? 'expression tag' -17 6
1 4WVU HIS A 7 ? UNP P98170 ? ? 'expression tag' -16 7
1 4WVU HIS A 8 ? UNP P98170 ? ? 'expression tag' -15 8
1 4WVU HIS A 9 ? UNP P98170 ? ? 'expression tag' -14 9
1 4WVU HIS A 10 ? UNP P98170 ? ? 'expression tag' -13 10
1 4WVU SER A 11 ? UNP P98170 ? ? 'expression tag' -12 11
1 4WVU SER A 12 ? UNP P98170 ? ? 'expression tag' -11 12
1 4WVU GLY A 13 ? UNP P98170 ? ? 'expression tag' -10 13
1 4WVU GLU A 14 ? UNP P98170 ? ? 'expression tag' -9 14
1 4WVU THR A 15 ? UNP P98170 ? ? 'expression tag' -8 15
1 4WVU VAL A 16 ? UNP P98170 ? ? 'expression tag' -7 16
1 4WVU ARG A 17 ? UNP P98170 ? ? 'expression tag' -6 17
1 4WVU PHE A 18 ? UNP P98170 ? ? 'expression tag' -5 18
1 4WVU GLN A 19 ? UNP P98170 ? ? 'expression tag' -4 19
1 4WVU GLY A 20 ? UNP P98170 ? ? 'expression tag' -3 20
1 4WVU HIS A 21 ? UNP P98170 ? ? 'expression tag' -2 21
1 4WVU MET A 22 ? UNP P98170 ? ? 'expression tag' -1 22
1 4WVU ALA A 69 ? UNP P98170 CYS 202 'engineered mutation' 202 23
1 4WVU GLY A 80 ? UNP P98170 CYS 213 'engineered mutation' 213 24
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
3V8 non-polymer . '(4S)-4-[4-(2-carboxyethyl)-1H-1,2,3-triazol-1-yl]-L-proline' ?
'C10 H14 N4 O4' 254.243
ALA 'L-peptide linking' y ALANINE ?
'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ?
'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ?
'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ?
'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ?
'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ?
'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ?
'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ?
'C2 H5 N O2' 75.067
GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3'
92.094
HIS 'L-peptide linking' y HISTIDINE ?
'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O'
18.015
HOX 'L-peptide linking' n 4-amino-L-phenylalanine ?
'C9 H12 N2 O2' 180.204
ILE 'L-peptide linking' y ISOLEUCINE ?
'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ?
'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ?
'C6 H15 N2 O2 1' 147.195
MAA 'L-peptide linking' n N-methyl-L-alanine ?
'C4 H9 N O2' 103.120
MET 'L-peptide linking' y METHIONINE ?
'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ?
'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ?
'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ?
'C3 H7 N O3' 105.093
SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2'
96.063
THR 'L-peptide linking' y THREONINE ?
'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ?
'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ?
'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ?
'C5 H11 N O2' 117.146
ZN non-polymer . 'ZINC ION' ? 'Zn 2'
65.409
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 4WVU
_exptl.crystals_number 1
_exptl.details ?
_exptl.method 'X-RAY DIFFRACTION'
_exptl.method_details ?
#
_exptl_crystal.colour ?
_exptl_crystal.density_diffrn ?
_exptl_crystal.density_Matthews 1.73
_exptl_crystal.density_method ?
_exptl_crystal.density_percent_sol 28.97
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.id 1
_exptl_crystal.preparation ?
_exptl_crystal.size_max ?
_exptl_crystal.size_mid ?
_exptl_crystal.size_min ?
_exptl_crystal.size_rad ?
_exptl_crystal.colour_lustre ?
_exptl_crystal.colour_modifier ?
_exptl_crystal.colour_primary ?
_exptl_crystal.density_meas ?
_exptl_crystal.density_meas_esd ?
_exptl_crystal.density_meas_gt ?
_exptl_crystal.density_meas_lt ?
_exptl_crystal.density_meas_temp ?
_exptl_crystal.density_meas_temp_esd ?
_exptl_crystal.density_meas_temp_gt ?
_exptl_crystal.density_meas_temp_lt ?
_exptl_crystal.pdbx_crystal_image_url ?
_exptl_crystal.pdbx_crystal_image_format ?
_exptl_crystal.pdbx_mosaicity ?
_exptl_crystal.pdbx_mosaicity_esd ?
#
_exptl_crystal_grow.apparatus ?
_exptl_crystal_grow.atmosphere ?
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.details ?
_exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP'
_exptl_crystal_grow.method_ref ?
_exptl_crystal_grow.pH ?
_exptl_crystal_grow.pressure ?
_exptl_crystal_grow.pressure_esd ?
_exptl_crystal_grow.seeding ?
_exptl_crystal_grow.seeding_ref ?
_exptl_crystal_grow.temp 291
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.temp_esd ?
_exptl_crystal_grow.time ?
_exptl_crystal_grow.pdbx_details '.98 M AMMONIUM SULFATE and .1 M AMMONIUM FORMATE. Grew single crystals after streak seeding.'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.ambient_environment ?
_diffrn.ambient_temp 100
_diffrn.ambient_temp_details ?
_diffrn.ambient_temp_esd ?
_diffrn.crystal_id 1
_diffrn.crystal_support ?
_diffrn.crystal_treatment ?
_diffrn.details ?
_diffrn.id 1
_diffrn.ambient_pressure ?
_diffrn.ambient_pressure_esd ?
_diffrn.ambient_pressure_gt ?
_diffrn.ambient_pressure_lt ?
_diffrn.ambient_temp_gt ?
_diffrn.ambient_temp_lt ?
#
_diffrn_detector.details ?
_diffrn_detector.detector CCD
_diffrn_detector.diffrn_id 1
_diffrn_detector.type 'RIGAKU SATURN 92'
_diffrn_detector.area_resol_mean ?
_diffrn_detector.dtime ?
_diffrn_detector.pdbx_frames_total ?
_diffrn_detector.pdbx_collection_time_total ?
_diffrn_detector.pdbx_collection_date 2010-10-18
#
_diffrn_radiation.collimation ?
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.filter_edge ?
_diffrn_radiation.inhomogeneity ?
_diffrn_radiation.monochromator MicroMax
_diffrn_radiation.polarisn_norm ?
_diffrn_radiation.polarisn_ratio ?
_diffrn_radiation.probe ?
_diffrn_radiation.type ?
_diffrn_radiation.xray_symbol ?
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.pdbx_wavelength_list ?
_diffrn_radiation.pdbx_wavelength ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_analyzer ?
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.54
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.current ?
_diffrn_source.details ?
_diffrn_source.diffrn_id 1
_diffrn_source.power ?
_diffrn_source.size ?
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.target ?
_diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT'
_diffrn_source.voltage ?
_diffrn_source.take-off_angle ?
_diffrn_source.pdbx_wavelength_list 1.54
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_synchrotron_site ?
#
_reflns.B_iso_Wilson_estimate 12.95
_reflns.entry_id 4WVU
_reflns.data_reduction_details ?
_reflns.data_reduction_method ?
_reflns.d_resolution_high 2.02
_reflns.d_resolution_low 39.33
_reflns.details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.number_all ?
_reflns.number_obs 4708
_reflns.observed_criterion ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.observed_criterion_I_max ?
_reflns.observed_criterion_I_min ?
_reflns.observed_criterion_sigma_F ?
_reflns.observed_criterion_sigma_I ?
_reflns.percent_possible_obs 97.4
_reflns.R_free_details ?
_reflns.Rmerge_F_all ?
_reflns.Rmerge_F_obs ?
_reflns.Friedel_coverage ?
_reflns.number_gt ?
_reflns.threshold_expression ?
_reflns.pdbx_redundancy 3.4
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rmerge_I_all ?
_reflns.pdbx_Rsym_value .046
_reflns.pdbx_netI_over_av_sigmaI ?
_reflns.pdbx_netI_over_sigmaI 18.9
_reflns.pdbx_res_netI_over_av_sigmaI_2 ?
_reflns.pdbx_res_netI_over_sigmaI_2 ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_d_res_high_opt ?
_reflns.pdbx_d_res_low_opt ?
_reflns.pdbx_d_res_opt_method ?
_reflns.phase_calculation_details ?
_reflns.pdbx_Rrim_I_all ?
_reflns.pdbx_Rpim_I_all ?
_reflns.pdbx_d_opt ?
_reflns.pdbx_number_measured_all ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.pdbx_CC_half ?
_reflns.pdbx_R_split ?
#
_reflns_shell.d_res_high 2.02
_reflns_shell.d_res_low 2.13
_reflns_shell.meanI_over_sigI_all ?
_reflns_shell.meanI_over_sigI_obs 8.6
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_possible ?
_reflns_shell.number_unique_all ?
_reflns_shell.number_unique_obs ?
_reflns_shell.percent_possible_all 84.0
_reflns_shell.percent_possible_obs ?
_reflns_shell.Rmerge_F_all ?
_reflns_shell.Rmerge_F_obs ?
_reflns_shell.Rmerge_I_all ?
_reflns_shell.Rmerge_I_obs .128
_reflns_shell.meanI_over_sigI_gt ?
_reflns_shell.meanI_over_uI_all ?
_reflns_shell.meanI_over_uI_gt ?
_reflns_shell.number_measured_gt ?
_reflns_shell.number_unique_gt ?
_reflns_shell.percent_possible_gt ?
_reflns_shell.Rmerge_F_gt ?
_reflns_shell.Rmerge_I_gt ?
_reflns_shell.pdbx_redundancy 2.4
_reflns_shell.pdbx_Rsym_value .025
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_netI_over_sigmaI_all ?
_reflns_shell.pdbx_netI_over_sigmaI_obs ?
_reflns_shell.pdbx_Rrim_I_all ?
_reflns_shell.pdbx_Rpim_I_all ?
_reflns_shell.pdbx_rejects ?
_reflns_shell.pdbx_ordinal 1
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_CC_half ?
_reflns_shell.pdbx_R_split ?
#
_refine.aniso_B[1][1] -0.4682
_refine.aniso_B[1][2] 0.0000
_refine.aniso_B[1][3] -0.3608
_refine.aniso_B[2][2] -0.5547
_refine.aniso_B[2][3] 0.0000
_refine.aniso_B[3][3] 1.0229
_refine.B_iso_max ?
_refine.B_iso_mean 11.15
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc 0.9511
_refine.correlation_coeff_Fo_to_Fc_free 0.9275
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 4WVU
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high 2.02
_refine.ls_d_res_low 25.24
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs 4685
_refine.ls_number_reflns_R_free 220
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs 97.22
_refine.ls_percent_reflns_R_free 4.70
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs 0.1411
_refine.ls_R_factor_R_free 0.1781
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work 0.1392
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method 'FREE R-VALUE'
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.147
_refine.pdbx_overall_SU_R_free_Blow_DPI 0.151
_refine.pdbx_overall_SU_R_Blow_DPI 0.223
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id 1
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.overall_SU_R_Cruickshank_DPI 0.214
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
_refine_analyze.entry_id 4WVU
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_analyze.Luzzati_coordinate_error_free ?
_refine_analyze.Luzzati_coordinate_error_obs 0.155
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.Luzzati_d_res_low_obs ?
_refine_analyze.Luzzati_sigma_a_free ?
_refine_analyze.Luzzati_sigma_a_free_details ?
_refine_analyze.Luzzati_sigma_a_obs ?
_refine_analyze.Luzzati_sigma_a_obs_details ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.RG_d_res_high ?
_refine_analyze.RG_d_res_low ?
_refine_analyze.RG_free ?
_refine_analyze.RG_work ?
_refine_analyze.RG_free_work_ratio ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 633
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 65
_refine_hist.number_atoms_solvent 80
_refine_hist.number_atoms_total 778
_refine_hist.d_res_high 2.02
_refine_hist.d_res_low 25.24
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'X-RAY DIFFRACTION' ? 0.010 ? 776 ? t_bond_d 2.00 HARMONIC
'X-RAY DIFFRACTION' ? 0.87 ? 1101 ? t_angle_deg 2.00 HARMONIC
'X-RAY DIFFRACTION' ? ? ? 255 ? t_dihedral_angle_d 2.00 SINUSOIDAL
'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ?
'X-RAY DIFFRACTION' ? ? ? 15 ? t_trig_c_planes 2.00 HARMONIC
'X-RAY DIFFRACTION' ? ? ? 143 ? t_gen_planes 5.00 HARMONIC
'X-RAY DIFFRACTION' ? ? ? 776 ? t_it 20.00 HARMONIC
'X-RAY DIFFRACTION' ? ? ? 0 ? t_nbd 5.00 SEMIHARMONIC
'X-RAY DIFFRACTION' ? 3.29 ? ? ? t_omega_torsion ? ?
'X-RAY DIFFRACTION' ? 14.97 ? ? ? t_other_torsion ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ?
'X-RAY DIFFRACTION' ? ? ? 81 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC
'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ?
'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ?
'X-RAY DIFFRACTION' ? ? ? 930 ? t_ideal_dist_contact 4.00 SEMIHARMONIC
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.d_res_high 2.02
_refine_ls_shell.d_res_low 2.26
_refine_ls_shell.number_reflns_all 1222
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.number_reflns_R_free 58
_refine_ls_shell.number_reflns_R_work 1164
_refine_ls_shell.percent_reflns_obs 97.22
_refine_ls_shell.percent_reflns_R_free 4.75
_refine_ls_shell.R_factor_all 0.1187
_refine_ls_shell.R_factor_obs ?
_refine_ls_shell.R_factor_R_free 0.1555
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.R_factor_R_work 0.1167
_refine_ls_shell.redundancy_reflns_all ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.wR_factor_all ?
_refine_ls_shell.wR_factor_obs ?
_refine_ls_shell.wR_factor_R_free ?
_refine_ls_shell.wR_factor_R_work ?
_refine_ls_shell.pdbx_total_number_of_bins_used 5
_refine_ls_shell.pdbx_phase_error ?
_refine_ls_shell.pdbx_fsc_work ?
_refine_ls_shell.pdbx_fsc_free ?
#
_struct.entry_id 4WVU
_struct.title 'CRYSTAL STRUCTURE OF XIAP-BIR2 DOMAIN COMPLEXED WITH LIGAND BOUND'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag ?
#
_struct_keywords.entry_id 4WVU
_struct_keywords.text 'IAP, XIAP-BIR2, APOPTOSIS'
_struct_keywords.pdbx_keywords APOPTOSIS
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 5 ?
F N N 6 ?
G N N 6 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 ASN A 24 ? TYR A 28 ? ASN A 157 TYR A 161 5 ? 5
HELX_P HELX_P2 AA2 SER A 29 ? SER A 36 ? SER A 162 SER A 169 1 ? 8
HELX_P HELX_P3 AA3 PRO A 41 ? HIS A 45 ? PRO A 174 HIS A 178 5 ? 5
HELX_P HELX_P4 AA4 THR A 47 ? ALA A 54 ? THR A 180 ALA A 187 1 ? 8
HELX_P HELX_P5 AA5 ARG A 82 ? PHE A 91 ? ARG A 215 PHE A 224 1 ? 10
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? B MAA 1 C ? ? ? 1_555 B VAL 2 N ? ? B MAA 1 B VAL 2 1_555 ? ? ? ? ? ? ? 1.336 ? ?
covale2 covale both ? B VAL 2 C ? ? ? 1_555 B 3V8 3 N ? ? B VAL 2 B 3V8 3 1_555 ? ? ? ? ? ? ? 1.345 ? ?
covale3 covale both ? B 3V8 3 C ? ? ? 1_555 B PHE 4 N ? ? B 3V8 3 B PHE 4 1_555 ? ? ? ? ? ? ? 1.334 ? ?
covale4 covale one ? B 3V8 3 C10 ? ? ? 1_555 B HOX 5 NZ ? ? B 3V8 3 B HOX 5 1_555 ? ? ? ? ? ? ? 1.357 ? ?
covale5 covale both ? B PHE 4 C ? ? ? 1_555 B HOX 5 N ? ? B PHE 4 B HOX 5 1_555 ? ? ? ? ? ? ? 1.335 ? ?
metalc1 metalc ? ? A CYS 67 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 200 A ZN 301 1_555 ? ? ? ? ? ? ? 2.313 ? ?
metalc2 metalc ? ? A CYS 70 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 203 A ZN 301 1_555 ? ? ? ? ? ? ? 2.314 ? ?
metalc3 metalc ? ? A HIS 87 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 220 A ZN 301 1_555 ? ? ? ? ? ? ? 2.063 ? ?
metalc4 metalc ? ? A CYS 94 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 227 A ZN 301 1_555 ? ? ? ? ? ? ? 2.238 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
#
_struct_sheet.id AA1
_struct_sheet.type ?
_struct_sheet.number_strands 3
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 LEU A 56 ? ILE A 61 ? LEU A 189 ILE A 194
AA1 2 GLN A 64 ? CYS A 67 ? GLN A 197 CYS A 200
AA1 3 LYS A 73 ? LEU A 74 ? LYS A 206 LEU A 207
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N TYR A 57 ? N TYR A 190 O GLN A 66 ? O GLN A 199
AA1 2 3 N VAL A 65 ? N VAL A 198 O LEU A 74 ? O LEU A 207
#
loop_
_struct_site.id
_struct_site.pdbx_evidence_code
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_site.pdbx_auth_ins_code
_struct_site.pdbx_num_residues
_struct_site.details
AC1 Software A ZN 301 ? 4 'binding site for residue ZN A 301'
AC2 Software A SO4 302 ? 5 'binding site for residue SO4 A 302'
AC3 Software A GOL 303 ? 8 'binding site for residue GOL A 303'
AC4 Software B 3V8 3 ? 10 'binding site for residues 3V8 B 3 and HOX B 5'
#
loop_
_struct_site_gen.id
_struct_site_gen.site_id
_struct_site_gen.pdbx_num_res
_struct_site_gen.label_comp_id
_struct_site_gen.label_asym_id
_struct_site_gen.label_seq_id
_struct_site_gen.pdbx_auth_ins_code
_struct_site_gen.auth_comp_id
_struct_site_gen.auth_asym_id
_struct_site_gen.auth_seq_id
_struct_site_gen.label_atom_id
_struct_site_gen.label_alt_id
_struct_site_gen.symmetry
_struct_site_gen.details
1 AC1 4 CYS A 67 ? CYS A 200 . ? 1_555 ?
2 AC1 4 CYS A 70 ? CYS A 203 . ? 1_555 ?
3 AC1 4 HIS A 87 ? HIS A 220 . ? 1_555 ?
4 AC1 4 CYS A 94 ? CYS A 227 . ? 1_555 ?
5 AC2 5 GLN A 64 ? GLN A 197 . ? 1_555 ?
6 AC2 5 LYS A 75 ? LYS A 208 . ? 1_555 ?
7 AC2 5 ASN A 76 ? ASN A 209 . ? 1_555 ?
8 AC2 5 HOH F . ? HOH A 401 . ? 1_555 ?
9 AC2 5 HOH F . ? HOH A 420 . ? 1_555 ?
10 AC3 8 HIS A 21 ? HIS A -2 . ? 1_555 ?
11 AC3 8 GLY A 20 ? GLY A -3 . ? 1_555 ?
12 AC3 8 GLU A 31 ? GLU A 164 . ? 1_655 ?
13 AC3 8 LYS A 35 ? LYS A 168 . ? 1_655 ?
14 AC3 8 CYS A 70 ? CYS A 203 . ? 1_555 ?
15 AC3 8 ASN A 93 ? ASN A 226 . ? 1_555 ?
16 AC3 8 CYS A 94 ? CYS A 227 . ? 1_555 ?
17 AC3 8 PHE A 95 ? PHE A 228 . ? 1_555 ?
18 AC4 10 PHE A 37 ? PHE A 170 . ? 1_655 ?
19 AC4 10 GLN A 38 ? GLN A 171 . ? 1_655 ?
20 AC4 10 ASN A 39 ? ASN A 172 . ? 1_655 ?
21 AC4 10 TRP A 40 ? TRP A 173 . ? 1_655 ?
22 AC4 10 LYS A 73 ? LYS A 206 . ? 1_555 ?
23 AC4 10 HIS A 90 ? HIS A 223 . ? 1_555 ?
24 AC4 10 VAL B 2 ? VAL B 2 . ? 1_555 ?
25 AC4 10 PHE B 4 ? PHE B 4 . ? 1_555 ?
26 AC4 10 HOH G . ? HOH B 101 . ? 1_555 ?
27 AC4 10 HOH G . ? HOH B 102 . ? 1_555 ?
#
_database_PDB_matrix.entry_id 4WVU
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_atom_sites.entry_id 4WVU
_atom_sites.fract_transf_matrix[1][1] 0.035384
_atom_sites.fract_transf_matrix[1][2] -0.000000
_atom_sites.fract_transf_matrix[1][3] 0.003413
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.025427
_atom_sites.fract_transf_matrix[2][3] -0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.030390
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
H
N
O
S
ZN
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 -22 ? ? ? A . n
A 1 2 GLY 2 -21 ? ? ? A . n
A 1 3 SER 3 -20 ? ? ? A . n
A 1 4 SER 4 -19 ? ? ? A . n
A 1 5 HIS 5 -18 ? ? ? A . n
A 1 6 HIS 6 -17 ? ? ? A . n
A 1 7 HIS 7 -16 ? ? ? A . n
A 1 8 HIS 8 -15 ? ? ? A . n
A 1 9 HIS 9 -14 ? ? ? A . n
A 1 10 HIS 10 -13 ? ? ? A . n
A 1 11 SER 11 -12 ? ? ? A . n
A 1 12 SER 12 -11 ? ? ? A . n
A 1 13 GLY 13 -10 ? ? ? A . n
A 1 14 GLU 14 -9 ? ? ? A . n
A 1 15 THR 15 -8 ? ? ? A . n
A 1 16 VAL 16 -7 ? ? ? A . n
A 1 17 ARG 17 -6 ? ? ? A . n
A 1 18 PHE 18 -5 ? ? ? A . n
A 1 19 GLN 19 -4 ? ? ? A . n
A 1 20 GLY 20 -3 -3 GLY GLY A . n
A 1 21 HIS 21 -2 -2 HIS HIS A . n
A 1 22 MET 22 -1 -1 MET MET A . n
A 1 23 ARG 23 156 156 ARG ARG A . n
A 1 24 ASN 24 157 157 ASN ASN A . n
A 1 25 PRO 25 158 158 PRO PRO A . n
A 1 26 ALA 26 159 159 ALA ALA A . n
A 1 27 MET 27 160 160 MET MET A . n
A 1 28 TYR 28 161 161 TYR TYR A . n
A 1 29 SER 29 162 162 SER SER A . n
A 1 30 GLU 30 163 163 GLU GLU A . n
A 1 31 GLU 31 164 164 GLU GLU A . n
A 1 32 ALA 32 165 165 ALA ALA A . n
A 1 33 ARG 33 166 166 ARG ARG A . n
A 1 34 LEU 34 167 167 LEU LEU A . n
A 1 35 LYS 35 168 168 LYS LYS A . n
A 1 36 SER 36 169 169 SER SER A . n
A 1 37 PHE 37 170 170 PHE PHE A . n
A 1 38 GLN 38 171 171 GLN GLN A . n
A 1 39 ASN 39 172 172 ASN ASN A . n
A 1 40 TRP 40 173 173 TRP TRP A . n
A 1 41 PRO 41 174 174 PRO PRO A . n
A 1 42 ASP 42 175 175 ASP ASP A . n
A 1 43 TYR 43 176 176 TYR TYR A . n
A 1 44 ALA 44 177 177 ALA ALA A . n
A 1 45 HIS 45 178 178 HIS HIS A . n
A 1 46 LEU 46 179 179 LEU LEU A . n
A 1 47 THR 47 180 180 THR THR A . n
A 1 48 PRO 48 181 181 PRO PRO A . n
A 1 49 ARG 49 182 182 ARG ARG A . n
A 1 50 GLU 50 183 183 GLU GLU A . n
A 1 51 LEU 51 184 184 LEU LEU A . n
A 1 52 ALA 52 185 185 ALA ALA A . n
A 1 53 SER 53 186 186 SER SER A . n
A 1 54 ALA 54 187 187 ALA ALA A . n
A 1 55 GLY 55 188 188 GLY GLY A . n
A 1 56 LEU 56 189 189 LEU LEU A . n
A 1 57 TYR 57 190 190 TYR TYR A . n
A 1 58 TYR 58 191 191 TYR TYR A . n
A 1 59 THR 59 192 192 THR THR A . n
A 1 60 GLY 60 193 193 GLY GLY A . n
A 1 61 ILE 61 194 194 ILE ILE A . n
A 1 62 GLY 62 195 195 GLY GLY A . n
A 1 63 ASP 63 196 196 ASP ASP A . n
A 1 64 GLN 64 197 197 GLN GLN A . n
A 1 65 VAL 65 198 198 VAL VAL A . n
A 1 66 GLN 66 199 199 GLN GLN A . n
A 1 67 CYS 67 200 200 CYS CYS A . n
A 1 68 PHE 68 201 201 PHE PHE A . n
A 1 69 ALA 69 202 202 ALA ALA A . n
A 1 70 CYS 70 203 203 CYS CYS A . n
A 1 71 GLY 71 204 204 GLY GLY A . n
A 1 72 GLY 72 205 205 GLY GLY A . n
A 1 73 LYS 73 206 206 LYS LYS A . n
A 1 74 LEU 74 207 207 LEU LEU A . n
A 1 75 LYS 75 208 208 LYS LYS A . n
A 1 76 ASN 76 209 209 ASN ASN A . n
A 1 77 TRP 77 210 210 TRP TRP A . n
A 1 78 GLU 78 211 211 GLU GLU A . n
A 1 79 PRO 79 212 212 PRO PRO A . n
A 1 80 GLY 80 213 213 GLY GLY A . n
A 1 81 ASP 81 214 214 ASP ASP A . n
A 1 82 ARG 82 215 215 ARG ARG A . n
A 1 83 ALA 83 216 216 ALA ALA A . n
A 1 84 TRP 84 217 217 TRP TRP A . n
A 1 85 SER 85 218 218 SER SER A . n
A 1 86 GLU 86 219 219 GLU GLU A . n
A 1 87 HIS 87 220 220 HIS HIS A . n
A 1 88 ARG 88 221 221 ARG ARG A . n
A 1 89 ARG 89 222 222 ARG ARG A . n
A 1 90 HIS 90 223 223 HIS HIS A . n
A 1 91 PHE 91 224 224 PHE PHE A . n
A 1 92 PRO 92 225 225 PRO PRO A . n
A 1 93 ASN 93 226 226 ASN ASN A . n
A 1 94 CYS 94 227 227 CYS CYS A . n
A 1 95 PHE 95 228 228 PHE PHE A . n
A 1 96 PHE 96 229 229 PHE PHE A . n
A 1 97 VAL 97 230 230 VAL VAL A . n
A 1 98 LEU 98 231 231 LEU LEU A . n
B 2 1 MAA 1 1 4000 MAA LG1 B . n
B 2 2 VAL 2 2 4000 VAL LG1 B . n
B 2 3 3V8 3 3 4000 3V8 LG1 B . n
B 2 4 PHE 4 4 4000 PHE LG1 B . n
B 2 5 HOX 5 5 4000 HOX LG1 B . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN 1 301 502 ZN ZN A .
D 4 SO4 1 302 1 SO4 SO4 A .
E 5 GOL 1 303 3 GOL GOL A .
F 6 HOH 1 401 39 HOH HOH A .
F 6 HOH 2 402 29 HOH HOH A .
F 6 HOH 3 403 9 HOH HOH A .
F 6 HOH 4 404 65 HOH HOH A .
F 6 HOH 5 405 14 HOH HOH A .
F 6 HOH 6 406 63 HOH HOH A .
F 6 HOH 7 407 2 HOH HOH A .
F 6 HOH 8 408 40 HOH HOH A .
F 6 HOH 9 409 68 HOH HOH A .
F 6 HOH 10 410 64 HOH HOH A .
F 6 HOH 11 411 17 HOH HOH A .
F 6 HOH 12 412 47 HOH HOH A .
F 6 HOH 13 413 79 HOH HOH A .
F 6 HOH 14 414 33 HOH HOH A .
F 6 HOH 15 415 58 HOH HOH A .
F 6 HOH 16 416 15 HOH HOH A .
F 6 HOH 17 417 42 HOH HOH A .
F 6 HOH 18 418 1 HOH HOH A .
F 6 HOH 19 419 28 HOH HOH A .
F 6 HOH 20 420 10 HOH HOH A .
F 6 HOH 21 421 66 HOH HOH A .
F 6 HOH 22 422 21 HOH HOH A .
F 6 HOH 23 423 61 HOH HOH A .
F 6 HOH 24 424 80 HOH HOH A .
F 6 HOH 25 425 75 HOH HOH A .
F 6 HOH 26 426 19 HOH HOH A .
F 6 HOH 27 427 30 HOH HOH A .
F 6 HOH 28 428 59 HOH HOH A .
F 6 HOH 29 429 24 HOH HOH A .
F 6 HOH 30 430 23 HOH HOH A .
F 6 HOH 31 431 37 HOH HOH A .
F 6 HOH 32 432 38 HOH HOH A .
F 6 HOH 33 433 16 HOH HOH A .
F 6 HOH 34 434 50 HOH HOH A .
F 6 HOH 35 435 36 HOH HOH A .
F 6 HOH 36 436 6 HOH HOH A .
F 6 HOH 37 437 34 HOH HOH A .
F 6 HOH 38 438 43 HOH HOH A .
F 6 HOH 39 439 56 HOH HOH A .
F 6 HOH 40 440 13 HOH HOH A .
F 6 HOH 41 441 18 HOH HOH A .
F 6 HOH 42 442 67 HOH HOH A .
F 6 HOH 43 443 55 HOH HOH A .
F 6 HOH 44 444 22 HOH HOH A .
F 6 HOH 45 445 52 HOH HOH A .
F 6 HOH 46 446 12 HOH HOH A .
F 6 HOH 47 447 76 HOH HOH A .
F 6 HOH 48 448 57 HOH HOH A .
F 6 HOH 49 449 35 HOH HOH A .
F 6 HOH 50 450 71 HOH HOH A .
F 6 HOH 51 451 5 HOH HOH A .
F 6 HOH 52 452 44 HOH HOH A .
F 6 HOH 53 453 77 HOH HOH A .
F 6 HOH 54 454 73 HOH HOH A .
F 6 HOH 55 455 46 HOH HOH A .
F 6 HOH 56 456 72 HOH HOH A .
F 6 HOH 57 457 27 HOH HOH A .
F 6 HOH 58 458 45 HOH HOH A .
F 6 HOH 59 459 74 HOH HOH A .
F 6 HOH 60 460 49 HOH HOH A .
F 6 HOH 61 461 69 HOH HOH A .
F 6 HOH 62 462 60 HOH HOH A .
F 6 HOH 63 463 70 HOH HOH A .
F 6 HOH 64 464 41 HOH HOH A .
F 6 HOH 65 465 3 HOH HOH A .
F 6 HOH 66 466 7 HOH HOH A .
F 6 HOH 67 467 8 HOH HOH A .
F 6 HOH 68 468 11 HOH HOH A .
F 6 HOH 69 469 20 HOH HOH A .
F 6 HOH 70 470 25 HOH HOH A .
F 6 HOH 71 471 26 HOH HOH A .
F 6 HOH 72 472 31 HOH HOH A .
F 6 HOH 73 473 32 HOH HOH A .
F 6 HOH 74 474 48 HOH HOH A .
F 6 HOH 75 475 53 HOH HOH A .
F 6 HOH 76 476 54 HOH HOH A .
F 6 HOH 77 477 78 HOH HOH A .
G 6 HOH 1 101 51 HOH HOH B .
G 6 HOH 2 102 62 HOH HOH B .
G 6 HOH 3 103 4 HOH HOH B .
#
_pdbx_molecule_features.prd_id PRD_002132
_pdbx_molecule_features.name '(3,11-DIFLUORO-6,8,13-TRIMETHYL-8H-QUINO[4,3,2-KL]ACRIDIN-13-IUM'
_pdbx_molecule_features.type 'Cyclic peptide'
_pdbx_molecule_features.class Antagonist
_pdbx_molecule_features.details ?
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_002132
_pdbx_molecule.asym_id B
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 1270 ?
1 MORE -14 ?
1 'SSA (A^2)' 4820 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 SG ? A CYS 67 ? A CYS 200 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 70 ? A CYS 203 ? 1_555 109.7 ?
2 SG ? A CYS 67 ? A CYS 200 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 87 ? A HIS 220 ? 1_555 97.1 ?
3 SG ? A CYS 70 ? A CYS 203 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 87 ? A HIS 220 ? 1_555 115.6 ?
4 SG ? A CYS 67 ? A CYS 200 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 94 ? A CYS 227 ? 1_555 113.7 ?
5 SG ? A CYS 70 ? A CYS 203 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 94 ? A CYS 227 ? 1_555 112.2 ?
6 NE2 ? A HIS 87 ? A HIS 220 ? 1_555 ZN ? C ZN . ? A ZN 301 ? 1_555 SG ? A CYS 94 ? A CYS 227 ? 1_555 107.7 ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2015-03-04
2 'Structure model' 1 1 2015-04-08
3 'Structure model' 2 0 2023-11-15
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Database references'
2 3 'Structure model' 'Atomic model'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Database references'
5 3 'Structure model' 'Derived calculations'
6 3 'Structure model' Other
7 3 'Structure model' 'Source and taxonomy'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 3 'Structure model' atom_site
2 3 'Structure model' atom_site_anisotrop
3 3 'Structure model' chem_comp_atom
4 3 'Structure model' chem_comp_bond
5 3 'Structure model' citation
6 3 'Structure model' database_2
7 3 'Structure model' entity_src_gen
8 3 'Structure model' pdbx_database_status
9 3 'Structure model' pdbx_entity_src_syn
10 3 'Structure model' pdbx_struct_oper_list
11 3 'Structure model' struct_conn
12 3 'Structure model' struct_conn_type
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 3 'Structure model' '_atom_site.auth_atom_id'
2 3 'Structure model' '_atom_site.label_atom_id'
3 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id'
4 3 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id'
5 3 'Structure model' '_citation.journal_id_CSD'
6 3 'Structure model' '_database_2.pdbx_DOI'
7 3 'Structure model' '_database_2.pdbx_database_accession'
8 3 'Structure model' '_entity_src_gen.pdbx_alt_source_flag'
9 3 'Structure model' '_pdbx_database_status.pdb_format_compatible'
10 3 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag'
11 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation'
12 3 'Structure model' '_struct_conn.conn_type_id'
13 3 'Structure model' '_struct_conn.id'
14 3 'Structure model' '_struct_conn.pdbx_dist_value'
15 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
16 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
17 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
18 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
19 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'
20 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'
21 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'
22 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'
23 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
24 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
25 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
26 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'
27 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'
28 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'
29 3 'Structure model' '_struct_conn.ptnr2_label_seq_id'
30 3 'Structure model' '_struct_conn_type.id'
#
_pdbx_refine_tls.id 1
_pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls.details ?
_pdbx_refine_tls.method refined
_pdbx_refine_tls.origin_x 0.6409
_pdbx_refine_tls.origin_y 4.3663
_pdbx_refine_tls.origin_z 6.1486
_pdbx_refine_tls.T[1][1] -0.0787
_pdbx_refine_tls.T[1][1]_esd ?
_pdbx_refine_tls.T[1][2] 0.0018
_pdbx_refine_tls.T[1][2]_esd ?
_pdbx_refine_tls.T[1][3] 0.0049
_pdbx_refine_tls.T[1][3]_esd ?
_pdbx_refine_tls.T[2][2] -0.1035
_pdbx_refine_tls.T[2][2]_esd ?
_pdbx_refine_tls.T[2][3] -0.0010
_pdbx_refine_tls.T[2][3]_esd ?
_pdbx_refine_tls.T[3][3] -0.0932
_pdbx_refine_tls.T[3][3]_esd ?
_pdbx_refine_tls.L[1][1] 0.6978
_pdbx_refine_tls.L[1][1]_esd ?
_pdbx_refine_tls.L[1][2] -0.1685
_pdbx_refine_tls.L[1][2]_esd ?
_pdbx_refine_tls.L[1][3] 0.0050
_pdbx_refine_tls.L[1][3]_esd ?
_pdbx_refine_tls.L[2][2] 1.0069
_pdbx_refine_tls.L[2][2]_esd ?
_pdbx_refine_tls.L[2][3] -0.5641
_pdbx_refine_tls.L[2][3]_esd ?
_pdbx_refine_tls.L[3][3] 1.1158
_pdbx_refine_tls.L[3][3]_esd ?
_pdbx_refine_tls.S[1][1] -0.0390
_pdbx_refine_tls.S[1][1]_esd ?
_pdbx_refine_tls.S[1][2] -0.0279
_pdbx_refine_tls.S[1][2]_esd ?
_pdbx_refine_tls.S[1][3] 0.0128
_pdbx_refine_tls.S[1][3]_esd ?
_pdbx_refine_tls.S[2][1] 0.0843
_pdbx_refine_tls.S[2][1]_esd ?
_pdbx_refine_tls.S[2][2] 0.0215
_pdbx_refine_tls.S[2][2]_esd ?
_pdbx_refine_tls.S[2][3] -0.0469
_pdbx_refine_tls.S[2][3]_esd ?
_pdbx_refine_tls.S[3][1] -0.0141
_pdbx_refine_tls.S[3][1]_esd ?
_pdbx_refine_tls.S[3][2] 0.0473
_pdbx_refine_tls.S[3][2]_esd ?
_pdbx_refine_tls.S[3][3] 0.0175
_pdbx_refine_tls.S[3][3]_esd ?
#
_pdbx_refine_tls_group.id 1
_pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION'
_pdbx_refine_tls_group.refine_tls_id 1
_pdbx_refine_tls_group.beg_label_asym_id ?
_pdbx_refine_tls_group.beg_label_seq_id ?
_pdbx_refine_tls_group.beg_auth_asym_id ?
_pdbx_refine_tls_group.beg_auth_seq_id ?
_pdbx_refine_tls_group.end_label_asym_id ?
_pdbx_refine_tls_group.end_label_seq_id ?
_pdbx_refine_tls_group.end_auth_asym_id ?
_pdbx_refine_tls_group.end_auth_seq_id ?
_pdbx_refine_tls_group.selection ?
_pdbx_refine_tls_group.selection_details '{ A|* }'
#
loop_
_software.citation_id
_software.classification
_software.compiler_name
_software.compiler_version
_software.contact_author
_software.contact_author_email
_software.date
_software.description
_software.dependencies
_software.hardware
_software.language
_software.location
_software.mods
_software.name
_software.os
_software.os_version
_software.type
_software.version
_software.pdbx_ordinal
? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1
? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 2
? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.5 3
? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id HIS
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 178
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi 65.26
_pdbx_validate_torsion.psi -48.29
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A HIS -2 ? CG ? A HIS 21 CG
2 1 Y 1 A HIS -2 ? ND1 ? A HIS 21 ND1
3 1 Y 1 A HIS -2 ? CD2 ? A HIS 21 CD2
4 1 Y 1 A HIS -2 ? CE1 ? A HIS 21 CE1
5 1 Y 1 A HIS -2 ? NE2 ? A HIS 21 NE2
6 1 Y 1 A ASP 175 ? CG ? A ASP 42 CG
7 1 Y 1 A ASP 175 ? OD1 ? A ASP 42 OD1
8 1 Y 1 A ASP 175 ? OD2 ? A ASP 42 OD2
9 1 Y 1 A ARG 182 ? CG ? A ARG 49 CG
10 1 Y 1 A ARG 182 ? CD ? A ARG 49 CD
11 1 Y 1 A ARG 182 ? NE ? A ARG 49 NE
12 1 Y 1 A ARG 182 ? CZ ? A ARG 49 CZ
13 1 Y 1 A ARG 182 ? NH1 ? A ARG 49 NH1
14 1 Y 1 A ARG 182 ? NH2 ? A ARG 49 NH2
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET -22 ? A MET 1
2 1 Y 1 A GLY -21 ? A GLY 2
3 1 Y 1 A SER -20 ? A SER 3
4 1 Y 1 A SER -19 ? A SER 4
5 1 Y 1 A HIS -18 ? A HIS 5
6 1 Y 1 A HIS -17 ? A HIS 6
7 1 Y 1 A HIS -16 ? A HIS 7
8 1 Y 1 A HIS -15 ? A HIS 8
9 1 Y 1 A HIS -14 ? A HIS 9
10 1 Y 1 A HIS -13 ? A HIS 10
11 1 Y 1 A SER -12 ? A SER 11
12 1 Y 1 A SER -11 ? A SER 12
13 1 Y 1 A GLY -10 ? A GLY 13
14 1 Y 1 A GLU -9 ? A GLU 14
15 1 Y 1 A THR -8 ? A THR 15
16 1 Y 1 A VAL -7 ? A VAL 16
17 1 Y 1 A ARG -6 ? A ARG 17
18 1 Y 1 A PHE -5 ? A PHE 18
19 1 Y 1 A GLN -4 ? A GLN 19
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
3V8 C18 C N N 1
3V8 CA C N S 2
3V8 C C N N 3
3V8 C19 C N S 4
3V8 C20 C N N 5
3V8 C11 C N N 6
3V8 C12 C N N 7
3V8 C10 C N N 8
3V8 O3 O N N 9
3V8 O O N N 10
3V8 N N N N 11
3V8 N5 N Y N 12
3V8 C30 C Y N 13
3V8 C31 C Y N 14
3V8 N8 N Y N 15
3V8 N9 N Y N 16
3V8 H21 H N N 17
3V8 H20 H N N 18
3V8 HA H N N 19
3V8 H22 H N N 20
3V8 H24 H N N 21
3V8 H23 H N N 22
3V8 H11 H N N 23
3V8 H10 H N N 24
3V8 H13 H N N 25
3V8 H12 H N N 26
3V8 H42 H N N 27
3V8 OXT O N N 28
3V8 HXT H N N 29
3V8 H H N N 30
3V8 O1 O N N 31
3V8 H1 H N N 32
ALA N N N N 33
ALA CA C N S 34
ALA C C N N 35
ALA O O N N 36
ALA CB C N N 37
ALA OXT O N N 38
ALA H H N N 39
ALA H2 H N N 40
ALA HA H N N 41
ALA HB1 H N N 42
ALA HB2 H N N 43
ALA HB3 H N N 44
ALA HXT H N N 45
ARG N N N N 46
ARG CA C N S 47
ARG C C N N 48
ARG O O N N 49
ARG CB C N N 50
ARG CG C N N 51
ARG CD C N N 52
ARG NE N N N 53
ARG CZ C N N 54
ARG NH1 N N N 55
ARG NH2 N N N 56
ARG OXT O N N 57
ARG H H N N 58
ARG H2 H N N 59
ARG HA H N N 60
ARG HB2 H N N 61
ARG HB3 H N N 62
ARG HG2 H N N 63
ARG HG3 H N N 64
ARG HD2 H N N 65
ARG HD3 H N N 66
ARG HE H N N 67
ARG HH11 H N N 68
ARG HH12 H N N 69
ARG HH21 H N N 70
ARG HH22 H N N 71
ARG HXT H N N 72
ASN N N N N 73
ASN CA C N S 74
ASN C C N N 75
ASN O O N N 76
ASN CB C N N 77
ASN CG C N N 78
ASN OD1 O N N 79
ASN ND2 N N N 80
ASN OXT O N N 81
ASN H H N N 82
ASN H2 H N N 83
ASN HA H N N 84
ASN HB2 H N N 85
ASN HB3 H N N 86
ASN HD21 H N N 87
ASN HD22 H N N 88
ASN HXT H N N 89
ASP N N N N 90
ASP CA C N S 91
ASP C C N N 92
ASP O O N N 93
ASP CB C N N 94
ASP CG C N N 95
ASP OD1 O N N 96
ASP OD2 O N N 97
ASP OXT O N N 98
ASP H H N N 99
ASP H2 H N N 100
ASP HA H N N 101
ASP HB2 H N N 102
ASP HB3 H N N 103
ASP HD2 H N N 104
ASP HXT H N N 105
CYS N N N N 106
CYS CA C N R 107
CYS C C N N 108
CYS O O N N 109
CYS CB C N N 110
CYS SG S N N 111
CYS OXT O N N 112
CYS H H N N 113
CYS H2 H N N 114
CYS HA H N N 115
CYS HB2 H N N 116
CYS HB3 H N N 117
CYS HG H N N 118
CYS HXT H N N 119
GLN N N N N 120
GLN CA C N S 121
GLN C C N N 122
GLN O O N N 123
GLN CB C N N 124
GLN CG C N N 125
GLN CD C N N 126
GLN OE1 O N N 127
GLN NE2 N N N 128
GLN OXT O N N 129
GLN H H N N 130
GLN H2 H N N 131
GLN HA H N N 132
GLN HB2 H N N 133
GLN HB3 H N N 134
GLN HG2 H N N 135
GLN HG3 H N N 136
GLN HE21 H N N 137
GLN HE22 H N N 138
GLN HXT H N N 139
GLU N N N N 140
GLU CA C N S 141
GLU C C N N 142
GLU O O N N 143
GLU CB C N N 144
GLU CG C N N 145
GLU CD C N N 146
GLU OE1 O N N 147
GLU OE2 O N N 148
GLU OXT O N N 149
GLU H H N N 150
GLU H2 H N N 151
GLU HA H N N 152
GLU HB2 H N N 153
GLU HB3 H N N 154
GLU HG2 H N N 155
GLU HG3 H N N 156
GLU HE2 H N N 157
GLU HXT H N N 158
GLY N N N N 159
GLY CA C N N 160
GLY C C N N 161
GLY O O N N 162
GLY OXT O N N 163
GLY H H N N 164
GLY H2 H N N 165
GLY HA2 H N N 166
GLY HA3 H N N 167
GLY HXT H N N 168
GOL C1 C N N 169
GOL O1 O N N 170
GOL C2 C N N 171
GOL O2 O N N 172
GOL C3 C N N 173
GOL O3 O N N 174
GOL H11 H N N 175
GOL H12 H N N 176
GOL HO1 H N N 177
GOL H2 H N N 178
GOL HO2 H N N 179
GOL H31 H N N 180
GOL H32 H N N 181
GOL HO3 H N N 182
HIS N N N N 183
HIS CA C N S 184
HIS C C N N 185
HIS O O N N 186
HIS CB C N N 187
HIS CG C Y N 188
HIS ND1 N Y N 189
HIS CD2 C Y N 190
HIS CE1 C Y N 191
HIS NE2 N Y N 192
HIS OXT O N N 193
HIS H H N N 194
HIS H2 H N N 195
HIS HA H N N 196
HIS HB2 H N N 197
HIS HB3 H N N 198
HIS HD1 H N N 199
HIS HD2 H N N 200
HIS HE1 H N N 201
HIS HE2 H N N 202
HIS HXT H N N 203
HOH O O N N 204
HOH H1 H N N 205
HOH H2 H N N 206
HOX O O N N 207
HOX C C N N 208
HOX N N N N 209
HOX OXT O N N 210
HOX CA C N S 211
HOX CB C N N 212
HOX CG C Y N 213
HOX CZ C Y N 214
HOX NZ N N N 215
HOX CD1 C Y N 216
HOX CD2 C Y N 217
HOX CE1 C Y N 218
HOX CE2 C Y N 219
HOX H H N N 220
HOX H2 H N N 221
HOX HXT H N N 222
HOX HA H N N 223
HOX HB H N N 224
HOX HBA H N N 225
HOX HNZ H N N 226
HOX HNZA H N N 227
HOX HD1 H N N 228
HOX HD2 H N N 229
HOX HE1 H N N 230
HOX HE2 H N N 231
ILE N N N N 232
ILE CA C N S 233
ILE C C N N 234
ILE O O N N 235
ILE CB C N S 236
ILE CG1 C N N 237
ILE CG2 C N N 238
ILE CD1 C N N 239
ILE OXT O N N 240
ILE H H N N 241
ILE H2 H N N 242
ILE HA H N N 243
ILE HB H N N 244
ILE HG12 H N N 245
ILE HG13 H N N 246
ILE HG21 H N N 247
ILE HG22 H N N 248
ILE HG23 H N N 249
ILE HD11 H N N 250
ILE HD12 H N N 251
ILE HD13 H N N 252
ILE HXT H N N 253
LEU N N N N 254
LEU CA C N S 255
LEU C C N N 256
LEU O O N N 257
LEU CB C N N 258
LEU CG C N N 259
LEU CD1 C N N 260
LEU CD2 C N N 261
LEU OXT O N N 262
LEU H H N N 263
LEU H2 H N N 264
LEU HA H N N 265
LEU HB2 H N N 266
LEU HB3 H N N 267
LEU HG H N N 268
LEU HD11 H N N 269
LEU HD12 H N N 270
LEU HD13 H N N 271
LEU HD21 H N N 272
LEU HD22 H N N 273
LEU HD23 H N N 274
LEU HXT H N N 275
LYS N N N N 276
LYS CA C N S 277
LYS C C N N 278
LYS O O N N 279
LYS CB C N N 280
LYS CG C N N 281
LYS CD C N N 282
LYS CE C N N 283
LYS NZ N N N 284
LYS OXT O N N 285
LYS H H N N 286
LYS H2 H N N 287
LYS HA H N N 288
LYS HB2 H N N 289
LYS HB3 H N N 290
LYS HG2 H N N 291
LYS HG3 H N N 292
LYS HD2 H N N 293
LYS HD3 H N N 294
LYS HE2 H N N 295
LYS HE3 H N N 296
LYS HZ1 H N N 297
LYS HZ2 H N N 298
LYS HZ3 H N N 299
LYS HXT H N N 300
MAA N N N N 301
MAA CM C N N 302
MAA CA C N S 303
MAA CB C N N 304
MAA C C N N 305
MAA O O N N 306
MAA OXT O N N 307
MAA H H N N 308
MAA HM1 H N N 309
MAA HM2 H N N 310
MAA HM3 H N N 311
MAA HA H N N 312
MAA HB1 H N N 313
MAA HB2 H N N 314
MAA HB3 H N N 315
MAA HXT H N N 316
MET N N N N 317
MET CA C N S 318
MET C C N N 319
MET O O N N 320
MET CB C N N 321
MET CG C N N 322
MET SD S N N 323
MET CE C N N 324
MET OXT O N N 325
MET H H N N 326
MET H2 H N N 327
MET HA H N N 328
MET HB2 H N N 329
MET HB3 H N N 330
MET HG2 H N N 331
MET HG3 H N N 332
MET HE1 H N N 333
MET HE2 H N N 334
MET HE3 H N N 335
MET HXT H N N 336
PHE N N N N 337
PHE CA C N S 338
PHE C C N N 339
PHE O O N N 340
PHE CB C N N 341
PHE CG C Y N 342
PHE CD1 C Y N 343
PHE CD2 C Y N 344
PHE CE1 C Y N 345
PHE CE2 C Y N 346
PHE CZ C Y N 347
PHE OXT O N N 348
PHE H H N N 349
PHE H2 H N N 350
PHE HA H N N 351
PHE HB2 H N N 352
PHE HB3 H N N 353
PHE HD1 H N N 354
PHE HD2 H N N 355
PHE HE1 H N N 356
PHE HE2 H N N 357
PHE HZ H N N 358
PHE HXT H N N 359
PRO N N N N 360
PRO CA C N S 361
PRO C C N N 362
PRO O O N N 363
PRO CB C N N 364
PRO CG C N N 365
PRO CD C N N 366
PRO OXT O N N 367
PRO H H N N 368
PRO HA H N N 369
PRO HB2 H N N 370
PRO HB3 H N N 371
PRO HG2 H N N 372
PRO HG3 H N N 373
PRO HD2 H N N 374
PRO HD3 H N N 375
PRO HXT H N N 376
SER N N N N 377
SER CA C N S 378
SER C C N N 379
SER O O N N 380
SER CB C N N 381
SER OG O N N 382
SER OXT O N N 383
SER H H N N 384
SER H2 H N N 385
SER HA H N N 386
SER HB2 H N N 387
SER HB3 H N N 388
SER HG H N N 389
SER HXT H N N 390
SO4 S S N N 391
SO4 O1 O N N 392
SO4 O2 O N N 393
SO4 O3 O N N 394
SO4 O4 O N N 395
THR N N N N 396
THR CA C N S 397
THR C C N N 398
THR O O N N 399
THR CB C N R 400
THR OG1 O N N 401
THR CG2 C N N 402
THR OXT O N N 403
THR H H N N 404
THR H2 H N N 405
THR HA H N N 406
THR HB H N N 407
THR HG1 H N N 408
THR HG21 H N N 409
THR HG22 H N N 410
THR HG23 H N N 411
THR HXT H N N 412
TRP N N N N 413
TRP CA C N S 414
TRP C C N N 415
TRP O O N N 416
TRP CB C N N 417
TRP CG C Y N 418
TRP CD1 C Y N 419
TRP CD2 C Y N 420
TRP NE1 N Y N 421
TRP CE2 C Y N 422
TRP CE3 C Y N 423
TRP CZ2 C Y N 424
TRP CZ3 C Y N 425
TRP CH2 C Y N 426
TRP OXT O N N 427
TRP H H N N 428
TRP H2 H N N 429
TRP HA H N N 430
TRP HB2 H N N 431
TRP HB3 H N N 432
TRP HD1 H N N 433
TRP HE1 H N N 434
TRP HE3 H N N 435
TRP HZ2 H N N 436
TRP HZ3 H N N 437
TRP HH2 H N N 438
TRP HXT H N N 439
TYR N N N N 440
TYR CA C N S 441
TYR C C N N 442
TYR O O N N 443
TYR CB C N N 444
TYR CG C Y N 445
TYR CD1 C Y N 446
TYR CD2 C Y N 447
TYR CE1 C Y N 448
TYR CE2 C Y N 449
TYR CZ C Y N 450
TYR OH O N N 451
TYR OXT O N N 452
TYR H H N N 453
TYR H2 H N N 454
TYR HA H N N 455
TYR HB2 H N N 456
TYR HB3 H N N 457
TYR HD1 H N N 458
TYR HD2 H N N 459
TYR HE1 H N N 460
TYR HE2 H N N 461
TYR HH H N N 462
TYR HXT H N N 463
VAL N N N N 464
VAL CA C N S 465
VAL C C N N 466
VAL O O N N 467
VAL CB C N N 468
VAL CG1 C N N 469
VAL CG2 C N N 470
VAL OXT O N N 471
VAL H H N N 472
VAL H2 H N N 473
VAL HA H N N 474
VAL HB H N N 475
VAL HG11 H N N 476
VAL HG12 H N N 477
VAL HG13 H N N 478
VAL HG21 H N N 479
VAL HG22 H N N 480
VAL HG23 H N N 481
VAL HXT H N N 482
ZN ZN ZN N N 483
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3V8 C18 CA sing N N 1
3V8 C18 C19 sing N N 2
3V8 CA C sing N N 3
3V8 CA N sing N N 4
3V8 C O doub N N 5
3V8 C19 C20 sing N N 6
3V8 C19 N5 sing N N 7
3V8 C20 N sing N N 8
3V8 C11 C10 sing N N 9
3V8 C11 C12 sing N N 10
3V8 C12 C31 sing N N 11
3V8 C10 O3 doub N N 12
3V8 N5 C30 sing Y N 13
3V8 N5 N9 sing Y N 14
3V8 C30 C31 doub Y N 15
3V8 C31 N8 sing Y N 16
3V8 N8 N9 doub Y N 17
3V8 C18 H21 sing N N 18
3V8 C18 H20 sing N N 19
3V8 CA HA sing N N 20
3V8 C19 H22 sing N N 21
3V8 C20 H24 sing N N 22
3V8 C20 H23 sing N N 23
3V8 C11 H11 sing N N 24
3V8 C11 H10 sing N N 25
3V8 C12 H13 sing N N 26
3V8 C12 H12 sing N N 27
3V8 C30 H42 sing N N 28
3V8 C OXT sing N N 29
3V8 OXT HXT sing N N 30
3V8 N H sing N N 31
3V8 C10 O1 sing N N 32
3V8 O1 H1 sing N N 33
ALA N CA sing N N 34
ALA N H sing N N 35
ALA N H2 sing N N 36
ALA CA C sing N N 37
ALA CA CB sing N N 38
ALA CA HA sing N N 39
ALA C O doub N N 40
ALA C OXT sing N N 41
ALA CB HB1 sing N N 42
ALA CB HB2 sing N N 43
ALA CB HB3 sing N N 44
ALA OXT HXT sing N N 45
ARG N CA sing N N 46
ARG N H sing N N 47
ARG N H2 sing N N 48
ARG CA C sing N N 49
ARG CA CB sing N N 50
ARG CA HA sing N N 51
ARG C O doub N N 52
ARG C OXT sing N N 53
ARG CB CG sing N N 54
ARG CB HB2 sing N N 55
ARG CB HB3 sing N N 56
ARG CG CD sing N N 57
ARG CG HG2 sing N N 58
ARG CG HG3 sing N N 59
ARG CD NE sing N N 60
ARG CD HD2 sing N N 61
ARG CD HD3 sing N N 62
ARG NE CZ sing N N 63
ARG NE HE sing N N 64
ARG CZ NH1 sing N N 65
ARG CZ NH2 doub N N 66
ARG NH1 HH11 sing N N 67
ARG NH1 HH12 sing N N 68
ARG NH2 HH21 sing N N 69
ARG NH2 HH22 sing N N 70
ARG OXT HXT sing N N 71
ASN N CA sing N N 72
ASN N H sing N N 73
ASN N H2 sing N N 74
ASN CA C sing N N 75
ASN CA CB sing N N 76
ASN CA HA sing N N 77
ASN C O doub N N 78
ASN C OXT sing N N 79
ASN CB CG sing N N 80
ASN CB HB2 sing N N 81
ASN CB HB3 sing N N 82
ASN CG OD1 doub N N 83
ASN CG ND2 sing N N 84
ASN ND2 HD21 sing N N 85
ASN ND2 HD22 sing N N 86
ASN OXT HXT sing N N 87
ASP N CA sing N N 88
ASP N H sing N N 89
ASP N H2 sing N N 90
ASP CA C sing N N 91
ASP CA CB sing N N 92
ASP CA HA sing N N 93
ASP C O doub N N 94
ASP C OXT sing N N 95
ASP CB CG sing N N 96
ASP CB HB2 sing N N 97
ASP CB HB3 sing N N 98
ASP CG OD1 doub N N 99
ASP CG OD2 sing N N 100
ASP OD2 HD2 sing N N 101
ASP OXT HXT sing N N 102
CYS N CA sing N N 103
CYS N H sing N N 104
CYS N H2 sing N N 105
CYS CA C sing N N 106
CYS CA CB sing N N 107
CYS CA HA sing N N 108
CYS C O doub N N 109
CYS C OXT sing N N 110
CYS CB SG sing N N 111
CYS CB HB2 sing N N 112
CYS CB HB3 sing N N 113
CYS SG HG sing N N 114
CYS OXT HXT sing N N 115
GLN N CA sing N N 116
GLN N H sing N N 117
GLN N H2 sing N N 118
GLN CA C sing N N 119
GLN CA CB sing N N 120
GLN CA HA sing N N 121
GLN C O doub N N 122
GLN C OXT sing N N 123
GLN CB CG sing N N 124
GLN CB HB2 sing N N 125
GLN CB HB3 sing N N 126
GLN CG CD sing N N 127
GLN CG HG2 sing N N 128
GLN CG HG3 sing N N 129
GLN CD OE1 doub N N 130
GLN CD NE2 sing N N 131
GLN NE2 HE21 sing N N 132
GLN NE2 HE22 sing N N 133
GLN OXT HXT sing N N 134
GLU N CA sing N N 135
GLU N H sing N N 136
GLU N H2 sing N N 137
GLU CA C sing N N 138
GLU CA CB sing N N 139
GLU CA HA sing N N 140
GLU C O doub N N 141
GLU C OXT sing N N 142
GLU CB CG sing N N 143
GLU CB HB2 sing N N 144
GLU CB HB3 sing N N 145
GLU CG CD sing N N 146
GLU CG HG2 sing N N 147
GLU CG HG3 sing N N 148
GLU CD OE1 doub N N 149
GLU CD OE2 sing N N 150
GLU OE2 HE2 sing N N 151
GLU OXT HXT sing N N 152
GLY N CA sing N N 153
GLY N H sing N N 154
GLY N H2 sing N N 155
GLY CA C sing N N 156
GLY CA HA2 sing N N 157
GLY CA HA3 sing N N 158
GLY C O doub N N 159
GLY C OXT sing N N 160
GLY OXT HXT sing N N 161
GOL C1 O1 sing N N 162
GOL C1 C2 sing N N 163
GOL C1 H11 sing N N 164
GOL C1 H12 sing N N 165
GOL O1 HO1 sing N N 166
GOL C2 O2 sing N N 167
GOL C2 C3 sing N N 168
GOL C2 H2 sing N N 169
GOL O2 HO2 sing N N 170
GOL C3 O3 sing N N 171
GOL C3 H31 sing N N 172
GOL C3 H32 sing N N 173
GOL O3 HO3 sing N N 174
HIS N CA sing N N 175
HIS N H sing N N 176
HIS N H2 sing N N 177
HIS CA C sing N N 178
HIS CA CB sing N N 179
HIS CA HA sing N N 180
HIS C O doub N N 181
HIS C OXT sing N N 182
HIS CB CG sing N N 183
HIS CB HB2 sing N N 184
HIS CB HB3 sing N N 185
HIS CG ND1 sing Y N 186
HIS CG CD2 doub Y N 187
HIS ND1 CE1 doub Y N 188
HIS ND1 HD1 sing N N 189
HIS CD2 NE2 sing Y N 190
HIS CD2 HD2 sing N N 191
HIS CE1 NE2 sing Y N 192
HIS CE1 HE1 sing N N 193
HIS NE2 HE2 sing N N 194
HIS OXT HXT sing N N 195
HOH O H1 sing N N 196
HOH O H2 sing N N 197
HOX O C doub N N 198
HOX CA C sing N N 199
HOX C OXT sing N N 200
HOX N CA sing N N 201
HOX N H sing N N 202
HOX N H2 sing N N 203
HOX OXT HXT sing N N 204
HOX CA CB sing N N 205
HOX CA HA sing N N 206
HOX CB CG sing N N 207
HOX CB HB sing N N 208
HOX CB HBA sing N N 209
HOX CD1 CG doub Y N 210
HOX CG CD2 sing Y N 211
HOX CE1 CZ doub Y N 212
HOX CZ CE2 sing Y N 213
HOX CZ NZ sing N N 214
HOX NZ HNZ sing N N 215
HOX NZ HNZA sing N N 216
HOX CD1 CE1 sing Y N 217
HOX CD1 HD1 sing N N 218
HOX CD2 CE2 doub Y N 219
HOX CD2 HD2 sing N N 220
HOX CE1 HE1 sing N N 221
HOX CE2 HE2 sing N N 222
ILE N CA sing N N 223
ILE N H sing N N 224
ILE N H2 sing N N 225
ILE CA C sing N N 226
ILE CA CB sing N N 227
ILE CA HA sing N N 228
ILE C O doub N N 229
ILE C OXT sing N N 230
ILE CB CG1 sing N N 231
ILE CB CG2 sing N N 232
ILE CB HB sing N N 233
ILE CG1 CD1 sing N N 234
ILE CG1 HG12 sing N N 235
ILE CG1 HG13 sing N N 236
ILE CG2 HG21 sing N N 237
ILE CG2 HG22 sing N N 238
ILE CG2 HG23 sing N N 239
ILE CD1 HD11 sing N N 240
ILE CD1 HD12 sing N N 241
ILE CD1 HD13 sing N N 242
ILE OXT HXT sing N N 243
LEU N CA sing N N 244
LEU N H sing N N 245
LEU N H2 sing N N 246
LEU CA C sing N N 247
LEU CA CB sing N N 248
LEU CA HA sing N N 249
LEU C O doub N N 250
LEU C OXT sing N N 251
LEU CB CG sing N N 252
LEU CB HB2 sing N N 253
LEU CB HB3 sing N N 254
LEU CG CD1 sing N N 255
LEU CG CD2 sing N N 256
LEU CG HG sing N N 257
LEU CD1 HD11 sing N N 258
LEU CD1 HD12 sing N N 259
LEU CD1 HD13 sing N N 260
LEU CD2 HD21 sing N N 261
LEU CD2 HD22 sing N N 262
LEU CD2 HD23 sing N N 263
LEU OXT HXT sing N N 264
LYS N CA sing N N 265
LYS N H sing N N 266
LYS N H2 sing N N 267
LYS CA C sing N N 268
LYS CA CB sing N N 269
LYS CA HA sing N N 270
LYS C O doub N N 271
LYS C OXT sing N N 272
LYS CB CG sing N N 273
LYS CB HB2 sing N N 274
LYS CB HB3 sing N N 275
LYS CG CD sing N N 276
LYS CG HG2 sing N N 277
LYS CG HG3 sing N N 278
LYS CD CE sing N N 279
LYS CD HD2 sing N N 280
LYS CD HD3 sing N N 281
LYS CE NZ sing N N 282
LYS CE HE2 sing N N 283
LYS CE HE3 sing N N 284
LYS NZ HZ1 sing N N 285
LYS NZ HZ2 sing N N 286
LYS NZ HZ3 sing N N 287
LYS OXT HXT sing N N 288
MAA N CM sing N N 289
MAA N CA sing N N 290
MAA N H sing N N 291
MAA CM HM1 sing N N 292
MAA CM HM2 sing N N 293
MAA CM HM3 sing N N 294
MAA CA CB sing N N 295
MAA CA C sing N N 296
MAA CA HA sing N N 297
MAA CB HB1 sing N N 298
MAA CB HB2 sing N N 299
MAA CB HB3 sing N N 300
MAA C O doub N N 301
MAA C OXT sing N N 302
MAA OXT HXT sing N N 303
MET N CA sing N N 304
MET N H sing N N 305
MET N H2 sing N N 306
MET CA C sing N N 307
MET CA CB sing N N 308
MET CA HA sing N N 309
MET C O doub N N 310
MET C OXT sing N N 311
MET CB CG sing N N 312
MET CB HB2 sing N N 313
MET CB HB3 sing N N 314
MET CG SD sing N N 315
MET CG HG2 sing N N 316
MET CG HG3 sing N N 317
MET SD CE sing N N 318
MET CE HE1 sing N N 319
MET CE HE2 sing N N 320
MET CE HE3 sing N N 321
MET OXT HXT sing N N 322
PHE N CA sing N N 323
PHE N H sing N N 324
PHE N H2 sing N N 325
PHE CA C sing N N 326
PHE CA CB sing N N 327
PHE CA HA sing N N 328
PHE C O doub N N 329
PHE C OXT sing N N 330
PHE CB CG sing N N 331
PHE CB HB2 sing N N 332
PHE CB HB3 sing N N 333
PHE CG CD1 doub Y N 334
PHE CG CD2 sing Y N 335
PHE CD1 CE1 sing Y N 336
PHE CD1 HD1 sing N N 337
PHE CD2 CE2 doub Y N 338
PHE CD2 HD2 sing N N 339
PHE CE1 CZ doub Y N 340
PHE CE1 HE1 sing N N 341
PHE CE2 CZ sing Y N 342
PHE CE2 HE2 sing N N 343
PHE CZ HZ sing N N 344
PHE OXT HXT sing N N 345
PRO N CA sing N N 346
PRO N CD sing N N 347
PRO N H sing N N 348
PRO CA C sing N N 349
PRO CA CB sing N N 350
PRO CA HA sing N N 351
PRO C O doub N N 352
PRO C OXT sing N N 353
PRO CB CG sing N N 354
PRO CB HB2 sing N N 355
PRO CB HB3 sing N N 356
PRO CG CD sing N N 357
PRO CG HG2 sing N N 358
PRO CG HG3 sing N N 359
PRO CD HD2 sing N N 360
PRO CD HD3 sing N N 361
PRO OXT HXT sing N N 362
SER N CA sing N N 363
SER N H sing N N 364
SER N H2 sing N N 365
SER CA C sing N N 366
SER CA CB sing N N 367
SER CA HA sing N N 368
SER C O doub N N 369
SER C OXT sing N N 370
SER CB OG sing N N 371
SER CB HB2 sing N N 372
SER CB HB3 sing N N 373
SER OG HG sing N N 374
SER OXT HXT sing N N 375
SO4 S O1 doub N N 376
SO4 S O2 doub N N 377
SO4 S O3 sing N N 378
SO4 S O4 sing N N 379
THR N CA sing N N 380
THR N H sing N N 381
THR N H2 sing N N 382
THR CA C sing N N 383
THR CA CB sing N N 384
THR CA HA sing N N 385
THR C O doub N N 386
THR C OXT sing N N 387
THR CB OG1 sing N N 388
THR CB CG2 sing N N 389
THR CB HB sing N N 390
THR OG1 HG1 sing N N 391
THR CG2 HG21 sing N N 392
THR CG2 HG22 sing N N 393
THR CG2 HG23 sing N N 394
THR OXT HXT sing N N 395
TRP N CA sing N N 396
TRP N H sing N N 397
TRP N H2 sing N N 398
TRP CA C sing N N 399
TRP CA CB sing N N 400
TRP CA HA sing N N 401
TRP C O doub N N 402
TRP C OXT sing N N 403
TRP CB CG sing N N 404
TRP CB HB2 sing N N 405
TRP CB HB3 sing N N 406
TRP CG CD1 doub Y N 407
TRP CG CD2 sing Y N 408
TRP CD1 NE1 sing Y N 409
TRP CD1 HD1 sing N N 410
TRP CD2 CE2 doub Y N 411
TRP CD2 CE3 sing Y N 412
TRP NE1 CE2 sing Y N 413
TRP NE1 HE1 sing N N 414
TRP CE2 CZ2 sing Y N 415
TRP CE3 CZ3 doub Y N 416
TRP CE3 HE3 sing N N 417
TRP CZ2 CH2 doub Y N 418
TRP CZ2 HZ2 sing N N 419
TRP CZ3 CH2 sing Y N 420
TRP CZ3 HZ3 sing N N 421
TRP CH2 HH2 sing N N 422
TRP OXT HXT sing N N 423
TYR N CA sing N N 424
TYR N H sing N N 425
TYR N H2 sing N N 426
TYR CA C sing N N 427
TYR CA CB sing N N 428
TYR CA HA sing N N 429
TYR C O doub N N 430
TYR C OXT sing N N 431
TYR CB CG sing N N 432
TYR CB HB2 sing N N 433
TYR CB HB3 sing N N 434
TYR CG CD1 doub Y N 435
TYR CG CD2 sing Y N 436
TYR CD1 CE1 sing Y N 437
TYR CD1 HD1 sing N N 438
TYR CD2 CE2 doub Y N 439
TYR CD2 HD2 sing N N 440
TYR CE1 CZ doub Y N 441
TYR CE1 HE1 sing N N 442
TYR CE2 CZ sing Y N 443
TYR CE2 HE2 sing N N 444
TYR CZ OH sing N N 445
TYR OH HH sing N N 446
TYR OXT HXT sing N N 447
VAL N CA sing N N 448
VAL N H sing N N 449
VAL N H2 sing N N 450
VAL CA C sing N N 451
VAL CA CB sing N N 452
VAL CA HA sing N N 453
VAL C O doub N N 454
VAL C OXT sing N N 455
VAL CB CG1 sing N N 456
VAL CB CG2 sing N N 457
VAL CB HB sing N N 458
VAL CG1 HG11 sing N N 459
VAL CG1 HG12 sing N N 460
VAL CG1 HG13 sing N N 461
VAL CG2 HG21 sing N N 462
VAL CG2 HG22 sing N N 463
VAL CG2 HG23 sing N N 464
VAL OXT HXT sing N N 465
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'ZINC ION' ZN
4 'SULFATE ION' SO4
5 GLYCEROL GOL
6 water HOH
#