HEADER PROTEIN BINDING 14-NOV-14 4WXU TITLE CRYSTAL STRUCTURE OF THE SELENOMTHIONINE INCORPORATED MYOCILIN TITLE 2 OLFACTOMEDIN DOMAIN E396D VARIANT. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOCILIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MYOCILIN 55 KDA SUBUNIT,TRABECULAR MESHWORK-INDUCED COMPND 5 GLUCOCORTICOID RESPONSE PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MYOC, GLC1A, TIGR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA PROPELLER, 5 BLADED PROPELLER, OLFACTOMEDIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR R.K.DONEGAN,D.M.FREEMAN,R.L.LIEBERMAN REVDAT 2 23-OCT-24 4WXU 1 SOURCE REMARK LINK REVDAT 1 01-APR-15 4WXU 0 JRNL AUTH R.K.DONEGAN,S.E.HILL,D.M.FREEMAN,E.NGUYEN,S.D.ORWIG, JRNL AUTH 2 K.C.TURNAGE,R.L.LIEBERMAN JRNL TITL STRUCTURAL BASIS FOR MISFOLDING IN MYOCILIN-ASSOCIATED JRNL TITL 2 GLAUCOMA. JRNL REF HUM.MOL.GENET. V. 24 2111 2015 JRNL REFN ESSN 1460-2083 JRNL PMID 25524706 JRNL DOI 10.1093/HMG/DDU730 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 14363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1434 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5989 - 4.4977 0.90 1359 151 0.1802 0.1901 REMARK 3 2 4.4977 - 3.5770 0.90 1343 145 0.1543 0.1824 REMARK 3 3 3.5770 - 3.1269 0.90 1324 145 0.1646 0.1851 REMARK 3 4 3.1269 - 2.8420 0.90 1331 143 0.1894 0.1982 REMARK 3 5 2.8420 - 2.6388 0.90 1313 153 0.1953 0.2281 REMARK 3 6 2.6388 - 2.4835 0.90 1318 145 0.1994 0.2342 REMARK 3 7 2.4835 - 2.3594 0.90 1299 142 0.1986 0.2070 REMARK 3 8 2.3594 - 2.2568 0.90 1338 148 0.1959 0.2400 REMARK 3 9 2.2568 - 2.1701 0.90 1313 142 0.1939 0.2187 REMARK 3 10 2.1701 - 2.0953 0.68 988 116 0.2085 0.2458 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2166 REMARK 3 ANGLE : 0.830 2942 REMARK 3 CHIRALITY : 0.033 323 REMARK 3 PLANARITY : 0.003 367 REMARK 3 DIHEDRAL : 12.954 793 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WXU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204733. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14363 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.092 REMARK 200 RESOLUTION RANGE LOW (A) : 19.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 13.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350 BIS-TRIS PH 6 MAGNESIUM REMARK 280 FORMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.28000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 228 REMARK 465 LYS A 229 REMARK 465 GLU A 230 REMARK 465 SER A 231 REMARK 465 PRO A 232 REMARK 465 SER A 233 REMARK 465 GLY A 234 REMARK 465 TYR A 235 REMARK 465 LEU A 236 REMARK 465 ARG A 237 REMARK 465 SER A 238 REMARK 465 GLY A 239 REMARK 465 GLU A 240 REMARK 465 GLY A 241 REMARK 465 ASP A 242 REMARK 465 THR A 243 REMARK 465 LYS A 503 REMARK 465 MSE A 504 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 422 O HOH A 705 1.51 REMARK 500 OE1 GLU A 414 O HOH A 894 1.90 REMARK 500 O HOH A 836 O HOH A 938 1.99 REMARK 500 O HOH A 776 O HOH A 844 2.06 REMARK 500 O HOH A 862 O HOH A 914 2.07 REMARK 500 OD1 ASP A 294 O HOH A 929 2.09 REMARK 500 O HOH A 715 O HOH A 762 2.11 REMARK 500 O HOH A 773 O HOH A 894 2.11 REMARK 500 O ASP A 294 O HOH A 701 2.12 REMARK 500 O HOH A 849 O HOH A 919 2.13 REMARK 500 NH1 ARG A 296 O HOH A 900 2.13 REMARK 500 NH2 ARG A 296 O HOH A 702 2.14 REMARK 500 NZ LYS A 355 O HOH A 905 2.15 REMARK 500 O HOH A 892 O HOH A 909 2.17 REMARK 500 O HOH A 729 O HOH A 908 2.18 REMARK 500 O HOH A 860 O HOH A 935 2.19 REMARK 500 O HOH A 941 O HOH A 943 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 756 O HOH A 784 2746 1.99 REMARK 500 O HOH A 754 O HOH A 773 2757 2.06 REMARK 500 O HOH A 707 O HOH A 777 2656 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 324 -155.05 62.35 REMARK 500 THR A 377 34.58 -85.49 REMARK 500 TYR A 392 -167.16 -164.84 REMARK 500 THR A 464 41.95 -142.77 REMARK 500 TYR A 473 73.59 -163.35 REMARK 500 ASN A 491 73.71 46.14 REMARK 500 LEU A 492 -12.43 73.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P6G A 602 REMARK 610 P6G A 603 REMARK 610 P6G A 604 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 607 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 326 O REMARK 620 2 ASP A 380 OD1 90.2 REMARK 620 3 LEU A 381 O 87.0 85.7 REMARK 620 4 ASP A 478 OD1 164.5 92.2 108.5 REMARK 620 5 ASP A 478 OD2 130.4 139.4 94.7 49.2 REMARK 620 6 HOH A 930 O 89.2 108.6 165.2 75.5 77.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 380 OD1 REMARK 620 2 ASP A 380 OD2 43.5 REMARK 620 3 ASN A 428 OD1 107.2 83.2 REMARK 620 4 ALA A 429 O 124.0 85.0 80.3 REMARK 620 5 ILE A 477 O 150.4 164.0 83.1 84.6 REMARK 620 6 ASP A 478 OD1 80.9 122.4 137.7 130.3 73.5 REMARK 620 7 HOH A 851 O 74.1 78.7 151.0 75.8 110.4 71.2 REMARK 620 8 HOH A 889 O 74.1 100.1 72.1 151.0 83.4 70.6 133.2 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P6G A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 607 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WXQ RELATED DB: PDB REMARK 900 4WXQ CONTAINS WILD TYPE MYOCILIN OLFACTOMEDIN DOMAIN REMARK 900 RELATED ID: 4WXS RELATED DB: PDB REMARK 900 4WXS CONTAINS MYOCILIN OLFACTOMEDIN DOMAIN E396D VARIANT WITHOUT REMARK 900 SELENOMETHIONINE DBREF 4WXU A 228 504 UNP Q99972 MYOC_HUMAN 228 504 SEQADV 4WXU ASP A 396 UNP Q99972 GLU 396 ENGINEERED MUTATION SEQRES 1 A 277 LEU LYS GLU SER PRO SER GLY TYR LEU ARG SER GLY GLU SEQRES 2 A 277 GLY ASP THR GLY CYS GLY GLU LEU VAL TRP VAL GLY GLU SEQRES 3 A 277 PRO LEU THR LEU ARG THR ALA GLU THR ILE THR GLY LYS SEQRES 4 A 277 TYR GLY VAL TRP MSE ARG ASP PRO LYS PRO THR TYR PRO SEQRES 5 A 277 TYR THR GLN GLU THR THR TRP ARG ILE ASP THR VAL GLY SEQRES 6 A 277 THR ASP VAL ARG GLN VAL PHE GLU TYR ASP LEU ILE SER SEQRES 7 A 277 GLN PHE MSE GLN GLY TYR PRO SER LYS VAL HIS ILE LEU SEQRES 8 A 277 PRO ARG PRO LEU GLU SER THR GLY ALA VAL VAL TYR SER SEQRES 9 A 277 GLY SER LEU TYR PHE GLN GLY ALA GLU SER ARG THR VAL SEQRES 10 A 277 ILE ARG TYR GLU LEU ASN THR GLU THR VAL LYS ALA GLU SEQRES 11 A 277 LYS GLU ILE PRO GLY ALA GLY TYR HIS GLY GLN PHE PRO SEQRES 12 A 277 TYR SER TRP GLY GLY TYR THR ASP ILE ASP LEU ALA VAL SEQRES 13 A 277 ASP GLU ALA GLY LEU TRP VAL ILE TYR SER THR ASP ASP SEQRES 14 A 277 ALA LYS GLY ALA ILE VAL LEU SER LYS LEU ASN PRO GLU SEQRES 15 A 277 ASN LEU GLU LEU GLU GLN THR TRP GLU THR ASN ILE ARG SEQRES 16 A 277 LYS GLN SER VAL ALA ASN ALA PHE ILE ILE CYS GLY THR SEQRES 17 A 277 LEU TYR THR VAL SER SER TYR THR SER ALA ASP ALA THR SEQRES 18 A 277 VAL ASN PHE ALA TYR ASP THR GLY THR GLY ILE SER LYS SEQRES 19 A 277 THR LEU THR ILE PRO PHE LYS ASN ARG TYR LYS TYR SER SEQRES 20 A 277 SER MSE ILE ASP TYR ASN PRO LEU GLU LYS LYS LEU PHE SEQRES 21 A 277 ALA TRP ASP ASN LEU ASN MSE VAL THR TYR ASP ILE LYS SEQRES 22 A 277 LEU SER LYS MSE MODRES 4WXU MSE A 271 MET MODIFIED RESIDUE MODRES 4WXU MSE A 308 MET MODIFIED RESIDUE MODRES 4WXU MSE A 476 MET MODIFIED RESIDUE MODRES 4WXU MSE A 494 MET MODIFIED RESIDUE HET MSE A 271 29 HET MSE A 308 29 HET MSE A 476 17 HET MSE A 494 29 HET CA A 601 1 HET P6G A 602 19 HET P6G A 603 16 HET P6G A 604 16 HET GOL A 605 14 HET GOL A 606 14 HET NA A 607 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION HETNAM P6G HEXAETHYLENE GLYCOL HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN P6G POLYETHYLENE GLYCOL PEG400 HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 CA CA 2+ FORMUL 3 P6G 3(C12 H26 O7) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 NA NA 1+ FORMUL 9 HOH *244(H2 O) HELIX 1 AA1 THR A 262 LYS A 266 5 5 HELIX 2 AA2 LEU A 303 GLY A 310 1 8 HELIX 3 AA3 GLN A 424 VAL A 426 5 3 SHEET 1 AA1 3 LEU A 248 VAL A 251 0 SHEET 2 AA1 3 ASN A 493 LEU A 501 -1 O LYS A 500 N VAL A 249 SHEET 3 AA1 3 LEU A 255 THR A 259 -1 N ARG A 258 O MSE A 494 SHEET 1 AA2 4 LEU A 248 VAL A 251 0 SHEET 2 AA2 4 ASN A 493 LEU A 501 -1 O LYS A 500 N VAL A 249 SHEET 3 AA2 4 LYS A 485 ASP A 490 -1 N ASP A 490 O ASN A 493 SHEET 4 AA2 4 SER A 474 ASN A 480 -1 N ASP A 478 O PHE A 487 SHEET 1 AA3 4 GLY A 268 ARG A 272 0 SHEET 2 AA3 4 THR A 285 ASP A 289 -1 O TRP A 286 N MSE A 271 SHEET 3 AA3 4 GLN A 297 TYR A 301 -1 O TYR A 301 N THR A 285 SHEET 4 AA3 4 LYS A 314 ILE A 317 -1 O LYS A 314 N GLU A 300 SHEET 1 AA4 4 VAL A 328 TYR A 330 0 SHEET 2 AA4 4 SER A 333 GLN A 337 -1 O TYR A 335 N VAL A 328 SHEET 3 AA4 4 THR A 343 GLU A 348 -1 O ILE A 345 N PHE A 336 SHEET 4 AA4 4 THR A 353 GLU A 359 -1 O ALA A 356 N ARG A 346 SHEET 1 AA5 4 ASP A 380 ASP A 384 0 SHEET 2 AA5 4 GLY A 387 TYR A 392 -1 O TRP A 389 N ALA A 382 SHEET 3 AA5 4 ALA A 400 LEU A 406 -1 O VAL A 402 N TYR A 392 SHEET 4 AA5 4 LEU A 413 ARG A 422 -1 O GLU A 414 N LYS A 405 SHEET 1 AA6 4 ASN A 428 ILE A 432 0 SHEET 2 AA6 4 THR A 435 VAL A 439 -1 O TYR A 437 N PHE A 430 SHEET 3 AA6 4 ALA A 447 ASP A 454 -1 O TYR A 453 N LEU A 436 SHEET 4 AA6 4 SER A 460 PHE A 467 -1 O LEU A 463 N ASN A 450 SSBOND 1 CYS A 245 CYS A 433 1555 1555 2.03 LINK C TRP A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N ARG A 272 1555 1555 1.33 LINK C PHE A 307 N MSE A 308 1555 1555 1.33 LINK C MSE A 308 N GLN A 309 1555 1555 1.33 LINK C SER A 475 N MSE A 476 1555 1555 1.33 LINK C MSE A 476 N ILE A 477 1555 1555 1.33 LINK C ASN A 493 N MSE A 494 1555 1555 1.33 LINK C MSE A 494 N VAL A 495 1555 1555 1.33 LINK O GLY A 326 NA NA A 607 1555 1555 2.72 LINK OD1 ASP A 380 CA CA A 601 1555 1555 3.19 LINK OD2 ASP A 380 CA CA A 601 1555 1555 2.39 LINK OD1 ASP A 380 NA NA A 607 1555 1555 2.39 LINK O LEU A 381 NA NA A 607 1555 1555 2.36 LINK OD1 ASN A 428 CA CA A 601 1555 1555 2.54 LINK O ALA A 429 CA CA A 601 1555 1555 2.43 LINK O ILE A 477 CA CA A 601 1555 1555 2.41 LINK OD1 ASP A 478 CA CA A 601 1555 1555 2.46 LINK OD1 ASP A 478 NA NA A 607 1555 1555 2.75 LINK OD2 ASP A 478 NA NA A 607 1555 1555 2.50 LINK CA CA A 601 O HOH A 851 1555 1555 2.70 LINK CA CA A 601 O HOH A 889 1555 1555 2.60 LINK NA NA A 607 O HOH A 930 1555 1555 2.32 CISPEP 1 TYR A 278 PRO A 279 0 0.45 SITE 1 AC1 7 ASP A 380 ASN A 428 ALA A 429 ILE A 477 SITE 2 AC1 7 ASP A 478 HOH A 851 HOH A 889 SITE 1 AC2 5 LYS A 275 TYR A 330 ASP A 384 GLU A 385 SITE 2 AC2 5 PRO A 481 SITE 1 AC3 2 TYR A 471 ASN A 493 SITE 1 AC4 4 PRO A 254 THR A 256 ARG A 470 HOH A 704 SITE 1 AC5 6 VAL A 251 GLY A 252 GLU A 253 PRO A 466 SITE 2 AC5 6 PHE A 467 LYS A 468 SITE 1 AC6 9 MSE A 271 ARG A 272 VAL A 328 VAL A 329 SITE 2 AC6 9 TYR A 479 ASN A 480 PHE A 487 HOH A 855 SITE 3 AC6 9 HOH A 914 SITE 1 AC7 6 GLY A 326 ALA A 327 ASP A 380 LEU A 381 SITE 2 AC7 6 ASP A 478 HOH A 930 CRYST1 49.484 50.560 50.537 90.00 97.27 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020209 0.000000 0.002578 0.00000 SCALE2 0.000000 0.019778 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019948 0.00000