HEADER TRANSFERASE 20-NOV-14 4WZU TITLE CRYSTAL STRUCTURE OF BETA-KETOACYL-(ACYL CARRIER PROTEIN) SYNTHASE TITLE 2 III-2 (FABH2) FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3 PROTEIN 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III PROTEIN 2, COMPND 5 BETA-KETOACYL-ACP SYNTHASE III 2,KAS III 2; COMPND 6 EC: 2.3.1.180; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 5 GENE: FABH2, VC_A0751; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, FABH, BETA-KETOACYL-(ACYL CARRIER PROTEIN) SYNTHASE KEYWDS 3 III, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.HOU,M.CHRUSZCZ,H.ZHENG,D.R.COOPER,M.D.CHORDIA,M.D.ZIMMERMAN, AUTHOR 2 W.F.ANDERSON,W.MINOR,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS AUTHOR 3 DISEASES (CSGID) REVDAT 7 27-SEP-23 4WZU 1 REMARK REVDAT 6 13-APR-22 4WZU 1 AUTHOR JRNL LINK REVDAT 5 11-DEC-19 4WZU 1 REMARK REVDAT 4 27-SEP-17 4WZU 1 REMARK REVDAT 3 14-OCT-15 4WZU 1 REMARK REVDAT 2 03-JUN-15 4WZU 1 JRNL REVDAT 1 03-DEC-14 4WZU 0 JRNL AUTH J.HOU,M.CHRUSZCZ,H.ZHENG,M.GRABOWSKI,M.D.CHORDIA, JRNL AUTH 2 W.F.ANDERSON,W.MINOR JRNL TITL STRUCTURAL AND ENZYMATIC STUDIES OF BETA-KETOACYL-(ACYL JRNL TITL 2 CARRIER PROTEIN) SYNTHASE III (FABH) FROM VIBRIO CHOLERAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1320 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1854 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2180 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2675 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : -1.85000 REMARK 3 B33 (A**2) : 1.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.096 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.644 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2734 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2579 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3721 ; 1.336 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5907 ; 0.775 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 359 ; 6.233 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;33.248 ;24.310 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 425 ;12.084 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;16.452 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3173 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 630 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1436 ; 0.937 ; 1.493 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1435 ; 0.935 ; 1.490 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1795 ; 1.573 ; 2.232 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 35 REMARK 3 ORIGIN FOR THE GROUP (A): 17.6420 17.4720 11.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.0940 T22: 0.2109 REMARK 3 T33: 0.2339 T12: -0.0095 REMARK 3 T13: 0.1100 T23: -0.1523 REMARK 3 L TENSOR REMARK 3 L11: 2.3688 L22: 1.5965 REMARK 3 L33: 3.0062 L12: 0.3288 REMARK 3 L13: -1.0469 L23: 0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.4970 S13: -0.3163 REMARK 3 S21: -0.3675 S22: 0.1620 S23: -0.4973 REMARK 3 S31: -0.0525 S32: 0.0353 S33: -0.1356 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 36 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7170 21.0850 18.6700 REMARK 3 T TENSOR REMARK 3 T11: 0.0599 T22: 0.2161 REMARK 3 T33: 0.1005 T12: -0.0190 REMARK 3 T13: 0.0231 T23: -0.0510 REMARK 3 L TENSOR REMARK 3 L11: 1.5308 L22: 1.5910 REMARK 3 L33: 0.5237 L12: 0.2466 REMARK 3 L13: 0.1083 L23: 0.1533 REMARK 3 S TENSOR REMARK 3 S11: -0.0569 S12: 0.3168 S13: -0.2108 REMARK 3 S21: -0.2298 S22: 0.1325 S23: -0.1614 REMARK 3 S31: 0.0219 S32: -0.0058 S33: -0.0756 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 186 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4910 24.4020 17.1670 REMARK 3 T TENSOR REMARK 3 T11: 0.0485 T22: 0.2355 REMARK 3 T33: 0.2010 T12: -0.0225 REMARK 3 T13: 0.0961 T23: -0.0779 REMARK 3 L TENSOR REMARK 3 L11: 1.4524 L22: 1.3379 REMARK 3 L33: 0.9334 L12: 0.4106 REMARK 3 L13: 0.2852 L23: 0.0284 REMARK 3 S TENSOR REMARK 3 S11: -0.1069 S12: 0.4043 S13: -0.2141 REMARK 3 S21: -0.2460 S22: 0.1512 S23: -0.5147 REMARK 3 S31: -0.0368 S32: 0.1155 S33: -0.0443 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 4WZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204842. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27226 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.63200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2EBD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SUCCINIC ACID,20% (W/V) PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.42900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.10600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.42900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.10600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 60.21200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 557 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 361 REMARK 465 GLU A 362 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 ARG A 39 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 186 CD OE1 NE2 REMARK 470 LEU A 315 CG CD1 CD2 REMARK 470 ARG A 323 CZ NH1 NH2 REMARK 470 LYS A 351 CG CD CE NZ REMARK 470 GLU A 354 CG CD OE1 OE2 REMARK 470 LYS A 357 CG CD CE NZ REMARK 470 ARG A 358 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 103 -32.49 74.27 REMARK 500 ALA A 112 -140.60 53.76 REMARK 500 ARG A 142 75.37 -119.45 REMARK 500 GLN A 177 -113.69 -103.83 REMARK 500 GLN A 252 73.29 -108.98 REMARK 500 SER A 283 -117.52 49.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 244 O REMARK 620 2 ASP A 246 OD2 83.6 REMARK 620 3 ASP A 305 OD2 91.9 101.9 REMARK 620 4 HOH A 551 O 102.0 86.2 164.7 REMARK 620 5 HOH A 558 O 107.1 165.0 88.5 81.3 REMARK 620 6 HOH A 638 O 156.9 75.4 83.2 86.4 95.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP01493 RELATED DB: TARGETTRACK DBREF 4WZU A 1 362 UNP Q9KLJ3 FABH2_VIBCH 1 362 SEQRES 1 A 362 MET THR GLN CYS TYR ALA GLU ILE THR GLY TRP GLY LYS SEQRES 2 A 362 CYS LEU PRO PRO ALA THR LEU SER ASN HIS ASP LEU SER SEQRES 3 A 362 THR PHE LEU ASP THR SER ASP GLU TRP ILE GLN SER ARG SEQRES 4 A 362 THR GLY ILE GLU GLN ARG ARG ILE SER HIS VAL ASN THR SEQRES 5 A 362 SER ASP LEU ALA THR VAL ALA ALA GLN HIS ALA ILE ALA SEQRES 6 A 362 CYS ALA GLY VAL SER VAL GLU GLU ILE ASP LEU ILE ILE SEQRES 7 A 362 VAL ALA THR CYS SER PRO ASP SER LEU ILE PRO ASN ILE SEQRES 8 A 362 ALA SER ARG VAL GLN GLN ASN LEU GLY ILE PRO SER ALA SEQRES 9 A 362 ALA ALA PHE ASP LEU ASN ALA ALA CYS THR GLY PHE LEU SEQRES 10 A 362 TYR GLY LEU GLU THR ALA THR ARG LEU MET GLN ALA SER SEQRES 11 A 362 HIS TYR ARG HIS ALA LEU VAL ILE GLY ALA GLU ARG LEU SEQRES 12 A 362 SER PHE TYR LEU ASP TRP THR LYS ARG ASP THR ALA VAL SEQRES 13 A 362 LEU PHE GLY ASP GLY ALA GLY ALA VAL VAL LEU SER LYS SEQRES 14 A 362 THR GLU GLN LYS VAL GLY LEU GLN ASP ALA GLN ILE GLY SEQRES 15 A 362 CYS ASP ALA GLN GLY ARG ASP ILE LEU ALA VAL PRO LYS SEQRES 16 A 362 PHE GLY THR ALA MET ASP ARG PHE ASP ALA ASP ASN GLY SEQRES 17 A 362 TYR TRP ALA PHE ASP PHE VAL GLY LYS GLU ILE PHE LYS SEQRES 18 A 362 ARG ALA VAL ARG GLY MET GLY ALA ALA ALA GLN GLN VAL SEQRES 19 A 362 LEU ALA ARG SER GLY LEU SER THR GLU GLU ILE ASP VAL SEQRES 20 A 362 VAL ILE PRO HIS GLN ALA ASN ILE ARG ILE ILE GLN THR SEQRES 21 A 362 LEU CYS ASP LEU ALA GLY ILE ALA GLN ASP LYS ALA PHE SEQRES 22 A 362 VAL ASN ILE HIS ARG TYR GLY ASN THR SER ALA ALA THR SEQRES 23 A 362 VAL PRO ILE ALA LEU CYS GLU ALA LEU GLU GLN GLY LYS SEQRES 24 A 362 ILE LYS PRO HIS ASP ASP LEU LEU VAL ALA ALA PHE GLY SEQRES 25 A 362 ALA GLY LEU THR TRP GLY ALA GLY HIS ILE ARG TRP GLY SEQRES 26 A 362 GLU ARG ILE THR PRO LEU GLY LYS SER ASP ALA GLN LEU SEQRES 27 A 362 PRO SER CYS ASP HIS THR ALA LEU ASP LEU LEU SER LYS SEQRES 28 A 362 ALA ILE GLU HIS CYS LYS ARG HIS GLN SER GLU HET NA A 401 1 HETNAM NA SODIUM ION FORMUL 2 NA NA 1+ FORMUL 3 HOH *140(H2 O) HELIX 1 AA1 ASN A 22 THR A 27 1 6 HELIX 2 AA2 SER A 32 GLY A 41 1 10 HELIX 3 AA3 ASN A 51 GLY A 68 1 18 HELIX 4 AA4 SER A 70 ILE A 74 5 5 HELIX 5 AA5 ILE A 91 GLY A 100 1 10 HELIX 6 AA6 ALA A 111 CYS A 113 5 3 HELIX 7 AA7 THR A 114 SER A 130 1 17 HELIX 8 AA8 SER A 144 TYR A 146 5 3 HELIX 9 AA9 LYS A 151 VAL A 156 1 6 HELIX 10 AB1 ALA A 185 ASP A 189 5 5 HELIX 11 AB2 VAL A 215 GLY A 239 1 25 HELIX 12 AB3 SER A 241 ILE A 245 5 5 HELIX 13 AB4 ASN A 254 GLY A 266 1 13 HELIX 14 AB5 ALA A 268 ALA A 272 5 5 HELIX 15 AB6 ASN A 275 GLY A 280 1 6 HELIX 16 AB7 THR A 282 ALA A 284 5 3 HELIX 17 AB8 ALA A 285 GLN A 297 1 13 HELIX 18 AB9 THR A 344 GLN A 360 1 17 SHEET 1 AA1 5 TYR A 5 CYS A 14 0 SHEET 2 AA1 5 ASP A 160 THR A 170 -1 O ALA A 162 N CYS A 14 SHEET 3 AA1 5 HIS A 134 ARG A 142 -1 N GLY A 139 O GLY A 163 SHEET 4 AA1 5 LEU A 76 ALA A 80 1 N ALA A 80 O ILE A 138 SHEET 5 AA1 5 ALA A 105 LEU A 109 1 O LEU A 109 N VAL A 79 SHEET 1 AA2 2 THR A 19 SER A 21 0 SHEET 2 AA2 2 GLN A 44 ARG A 46 -1 O ARG A 45 N LEU A 20 SHEET 1 AA3 4 GLY A 175 CYS A 183 0 SHEET 2 AA3 4 THR A 316 ARG A 323 -1 O HIS A 321 N GLN A 177 SHEET 3 AA3 4 ASP A 305 GLY A 312 -1 N LEU A 306 O ILE A 322 SHEET 4 AA3 4 VAL A 247 PRO A 250 1 N ILE A 249 O LEU A 307 SHEET 1 AA4 2 LEU A 191 ALA A 192 0 SHEET 2 AA4 2 ASP A 213 PHE A 214 -1 O ASP A 213 N ALA A 192 LINK O GLU A 244 NA NA A 401 1555 1555 2.49 LINK OD2 ASP A 246 NA NA A 401 1555 1555 2.52 LINK OD2 ASP A 305 NA NA A 401 1555 1555 2.39 LINK NA NA A 401 O HOH A 551 1555 1555 2.26 LINK NA NA A 401 O HOH A 558 1555 1555 2.23 LINK NA NA A 401 O HOH A 638 1555 1555 2.33 CISPEP 1 ILE A 88 PRO A 89 0 -6.15 CISPEP 2 GLY A 314 LEU A 315 0 -3.01 SITE 1 AC1 6 GLU A 244 ASP A 246 ASP A 305 HOH A 551 SITE 2 AC1 6 HOH A 558 HOH A 638 CRYST1 78.858 60.212 68.436 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012681 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014612 0.00000