HEADER TRANSPORT PROTEIN 20-NOV-14 4WZZ TITLE CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN TITLE 2 (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTAS (CPHY_0583, TARGET EFI- TITLE 3 511148) WITH BOUND L-RHAMNOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SUGAR ABC TRANSPORTER, SUBSTRATE-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABC TRANSPORTER SOLUTE BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PHYTOFERMENTANS; SOURCE 3 ORGANISM_TAXID: 357809; SOURCE 4 STRAIN: ATCC 700394 / DSM 18823 / ISDG; SOURCE 5 GENE: CPHY_0583; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ABC TRANSPORTER SOLUTE BINDING PROTEIN, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH,S.R.WASSERMAN, AUTHOR 2 J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA,S.CHOWDHURY,J.LAFLEUR,J.LOVE, AUTHOR 3 R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE AUTHOR 4 (EFI) REVDAT 4 13-NOV-24 4WZZ 1 HETSYN REVDAT 3 29-JUL-20 4WZZ 1 COMPND REMARK HETNAM SITE REVDAT 2 15-MAR-17 4WZZ 1 REMARK REVDAT 1 17-DEC-14 4WZZ 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,R.TORO,L.L.MORISCO,J.BENACH, JRNL AUTH 2 S.R.WASSERMAN,J.D.ATTONITO,A.SCOTT GLENN,S.CHAMALA, JRNL AUTH 3 S.CHOWDHURY,J.LAFLEUR,J.LOVE,R.D.SEIDEL,K.L.WHALEN, JRNL AUTH 4 J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING JRNL TITL 2 PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTAS JRNL TITL 3 (CPHY_0583, TARGET EFI-511148) WITH BOUND L-RHAMNOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 36564 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.6695 - 3.9932 1.00 2899 127 0.1489 0.1655 REMARK 3 2 3.9932 - 3.1712 1.00 2730 152 0.1327 0.1746 REMARK 3 3 3.1712 - 2.7708 1.00 2674 159 0.1524 0.1884 REMARK 3 4 2.7708 - 2.5177 1.00 2670 152 0.1496 0.1812 REMARK 3 5 2.5177 - 2.3373 1.00 2653 147 0.1471 0.2030 REMARK 3 6 2.3373 - 2.1996 1.00 2648 145 0.1371 0.1544 REMARK 3 7 2.1996 - 2.0895 1.00 2657 133 0.1367 0.1827 REMARK 3 8 2.0895 - 1.9986 1.00 2634 127 0.1367 0.1665 REMARK 3 9 1.9986 - 1.9216 1.00 2658 132 0.1489 0.1786 REMARK 3 10 1.9216 - 1.8553 1.00 2641 132 0.1506 0.1965 REMARK 3 11 1.8553 - 1.7973 1.00 2627 133 0.1632 0.2108 REMARK 3 12 1.7973 - 1.7460 1.00 2614 156 0.1579 0.2162 REMARK 3 13 1.7460 - 1.7000 1.00 2632 132 0.1608 0.1966 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2446 REMARK 3 ANGLE : 1.225 3333 REMARK 3 CHIRALITY : 0.072 390 REMARK 3 PLANARITY : 0.006 437 REMARK 3 DIHEDRAL : 13.562 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5506 34.4682 32.4707 REMARK 3 T TENSOR REMARK 3 T11: 0.2239 T22: 0.1718 REMARK 3 T33: 0.1730 T12: -0.0994 REMARK 3 T13: -0.0339 T23: 0.0363 REMARK 3 L TENSOR REMARK 3 L11: 0.9082 L22: 1.3847 REMARK 3 L33: 1.5203 L12: -0.1577 REMARK 3 L13: -0.0184 L23: -0.8048 REMARK 3 S TENSOR REMARK 3 S11: 0.1478 S12: -0.2588 S13: -0.2458 REMARK 3 S21: 0.3202 S22: -0.1220 S23: 0.0603 REMARK 3 S31: -0.0093 S32: -0.1068 S33: -0.0343 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.8628 49.8822 27.3400 REMARK 3 T TENSOR REMARK 3 T11: 0.2087 T22: 0.1370 REMARK 3 T33: 0.1231 T12: -0.0764 REMARK 3 T13: -0.0389 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.0373 L22: 1.0111 REMARK 3 L33: 0.9203 L12: 0.1488 REMARK 3 L13: 0.2748 L23: 0.1650 REMARK 3 S TENSOR REMARK 3 S11: 0.1914 S12: -0.2278 S13: 0.0860 REMARK 3 S21: 0.4206 S22: -0.1969 S23: -0.0341 REMARK 3 S31: -0.1797 S32: -0.0630 S33: 0.0478 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.8334 55.9891 13.1853 REMARK 3 T TENSOR REMARK 3 T11: 0.0862 T22: 0.0683 REMARK 3 T33: 0.1079 T12: 0.0227 REMARK 3 T13: -0.0045 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.7081 L22: 1.2417 REMARK 3 L33: 1.7170 L12: 0.1238 REMARK 3 L13: 0.3513 L23: -0.2259 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.0954 S13: 0.1587 REMARK 3 S21: -0.0005 S22: -0.0269 S23: 0.0772 REMARK 3 S31: -0.1872 S32: -0.1382 S33: 0.0268 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 310 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.2495 44.3215 12.1466 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.0726 REMARK 3 T33: 0.1110 T12: -0.0047 REMARK 3 T13: -0.0096 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.2024 L22: 1.3087 REMARK 3 L33: 1.4226 L12: 0.2443 REMARK 3 L13: 0.2845 L23: -0.3880 REMARK 3 S TENSOR REMARK 3 S11: 0.0887 S12: 0.0544 S13: -0.0891 REMARK 3 S21: -0.1403 S22: -0.0614 S23: -0.0878 REMARK 3 S31: 0.1425 S32: -0.0469 S33: -0.0212 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 311 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 79.9558 33.7076 37.2115 REMARK 3 T TENSOR REMARK 3 T11: 0.4301 T22: 0.5578 REMARK 3 T33: 0.4577 T12: -0.1820 REMARK 3 T13: -0.3931 T23: 0.2290 REMARK 3 L TENSOR REMARK 3 L11: 0.3816 L22: 0.2869 REMARK 3 L33: 0.1149 L12: -0.2133 REMARK 3 L13: -0.0151 L23: -0.0203 REMARK 3 S TENSOR REMARK 3 S11: 0.1408 S12: -0.0897 S13: -0.2401 REMARK 3 S21: 0.0308 S22: -0.1391 S23: -0.2331 REMARK 3 S31: 0.0745 S32: 0.1743 S33: -0.1315 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.2358 40.0356 22.5242 REMARK 3 T TENSOR REMARK 3 T11: 0.1259 T22: 0.1634 REMARK 3 T33: 0.1380 T12: -0.1048 REMARK 3 T13: -0.1554 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.7869 L22: 1.3090 REMARK 3 L33: 0.7745 L12: 0.5003 REMARK 3 L13: 0.2603 L23: -0.2710 REMARK 3 S TENSOR REMARK 3 S11: 0.2613 S12: -0.1290 S13: -0.2630 REMARK 3 S21: 0.2196 S22: -0.5533 S23: -0.6390 REMARK 3 S31: 0.0805 S32: 0.4385 S33: -0.3120 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WZZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1000204807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36564 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 87.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.60 REMARK 200 R MERGE (I) : 0.19600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 27.90 REMARK 200 R MERGE FOR SHELL (I) : 0.45540 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (51.24 MG/ML, 10 MM HEPES PH REMARK 280 7.5, 5 MM DTT, 10 MM L-RHAMNOSE); RESERVOIR (0.1 M SODIUM HEPES REMARK 280 PH 7.5, 1.4 M SODIUM CITRATE); CRYOPROTECTION (80% RESERVOIR + REMARK 280 20% GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.99100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.81250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.81250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.98650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.81250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.81250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.99550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.81250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.81250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.98650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.81250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.81250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.99550 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.99100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS A MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 549 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 568 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 GLY A 6 REMARK 465 VAL A 7 REMARK 465 ASP A 8 REMARK 465 LEU A 9 REMARK 465 GLY A 10 REMARK 465 THR A 11 REMARK 465 GLU A 12 REMARK 465 ASN A 13 REMARK 465 LEU A 14 REMARK 465 TYR A 15 REMARK 465 PHE A 16 REMARK 465 GLN A 17 REMARK 465 SER A 18 REMARK 465 MSE A 19 REMARK 465 GLY A 20 REMARK 465 CYS A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 LYS A 24 REMARK 465 THR A 25 REMARK 465 ASP A 26 REMARK 465 ASN A 27 REMARK 465 THR A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 ASN A 31 REMARK 465 LYS A 32 REMARK 465 ALA A 33 REMARK 465 LYS A 34 REMARK 465 THR A 35 REMARK 465 PRO A 36 REMARK 465 THR A 37 REMARK 465 THR A 38 REMARK 465 ALA A 39 REMARK 465 ALA A 40 REMARK 465 THR A 41 REMARK 465 THR A 42 REMARK 465 GLY A 43 REMARK 465 GLY A 44 REMARK 465 ASP A 45 REMARK 465 GLY A 46 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 82 O HOH A 503 1.59 REMARK 500 O HOH A 512 O HOH A 605 2.18 REMARK 500 O HOH A 752 O HOH A 768 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 521 O HOH A 521 8665 1.87 REMARK 500 O HOH A 547 O HOH A 574 3644 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 139 -55.18 72.76 REMARK 500 ALA A 182 -130.12 -97.02 REMARK 500 ASP A 281 66.44 -105.52 REMARK 500 LEU A 292 -138.74 -158.92 REMARK 500 ASP A 319 -2.81 79.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-511148 RELATED DB: TARGETTRACK DBREF 4WZZ A 20 367 UNP A9KIX1 A9KIX1_CLOPH 20 367 SEQADV 4WZZ MSE A -3 UNP A9KIX1 INITIATING METHIONINE SEQADV 4WZZ HIS A -2 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ HIS A -1 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ HIS A 0 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ HIS A 1 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ HIS A 2 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ HIS A 3 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ SER A 4 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ SER A 5 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ GLY A 6 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ VAL A 7 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ ASP A 8 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ LEU A 9 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ GLY A 10 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ THR A 11 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ GLU A 12 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ ASN A 13 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ LEU A 14 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ TYR A 15 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ PHE A 16 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ GLN A 17 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ SER A 18 UNP A9KIX1 EXPRESSION TAG SEQADV 4WZZ MSE A 19 UNP A9KIX1 EXPRESSION TAG SEQRES 1 A 371 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 371 GLY THR GLU ASN LEU TYR PHE GLN SER MSE GLY CYS SER SEQRES 3 A 371 SER LYS THR ASP ASN THR SER SER ASN LYS ALA LYS THR SEQRES 4 A 371 PRO THR THR ALA ALA THR THR GLY GLY ASP GLY TYR ALA SEQRES 5 A 371 THR THR ALA THR TYR ALA ILE ILE VAL LYS SER ALA GLY SEQRES 6 A 371 ASN PRO TYR ASN GLN LYS GLU SER GLU GLY TYR LYS GLN SEQRES 7 A 371 VAL ILE GLU ALA ASN GLY GLY LYS CYS VAL ILE GLN GLU SEQRES 8 A 371 PRO LYS SER ALA THR ALA GLU ASP GLN ILE THR CYS ILE SEQRES 9 A 371 ASN ASN ALA ILE SER GLN GLY VAL ASP CYS ILE ALA ILE SEQRES 10 A 371 ALA ALA ASN ASP THR ASP ALA LEU GLU PRO ALA LEU THR SEQRES 11 A 371 GLU ALA LYS ASN GLN GLY ILE HIS VAL LEU SER LEU ASP SEQRES 12 A 371 SER ALA THR ASN ALA ASN SER ARG LYS VAL PHE VAL ASN SEQRES 13 A 371 GLN ALA GLY THR THR GLN ILE ALA GLN ALA LEU MSE ASP SEQRES 14 A 371 ALA ILE LEU ASP ILE SER GLY GLY SER GLY ASP TRP ALA SEQRES 15 A 371 VAL LEU SER ALA ALA SER THR ALA THR ASN GLN ASN ALA SEQRES 16 A 371 TRP ILE ASP GLY MSE LYS THR VAL MSE GLN ASP SER LYS SEQRES 17 A 371 TYR SER LYS LEU ASN LEU ILE GLY VAL TYR TYR GLY ASP SEQRES 18 A 371 ASP GLU TYR GLN ALA SER CYS ASP GLN THR GLU ALA ILE SEQRES 19 A 371 LEU ALA ALA ASP PRO ASN ILE LYS VAL ILE CYS ALA PRO SEQRES 20 A 371 THR THR VAL GLY ILE MSE ALA ALA ALA LYS VAL LEU GLN SEQRES 21 A 371 ASP LYS GLY LEU SER GLY LYS VAL LYS LEU THR GLY LEU SEQRES 22 A 371 GLY LEU PRO SER GLU MSE ALA ASP TYR ILE GLY ASP ASP SEQRES 23 A 371 ASP GLN HIS SER CYS PRO TYR MSE PHE LEU TRP ASN PRO SEQRES 24 A 371 ILE GLN LEU GLY ASN LEU ALA ALA TYR ALA SER ILE SER SEQRES 25 A 371 LEU VAL ASN GLY THR ILE THR GLY ALA ALA ASP GLN SER SEQRES 26 A 371 PHE THR VAL PRO ASP LYS THR LEU GLY ASP ASN GLY SER SEQRES 27 A 371 TYR LYS ILE THR ALA ALA ALA ASP GLY GLY THR GLU ILE SEQRES 28 A 371 ILE LEU GLY ALA PRO PHE LYS PHE GLU PRO SER ASN ILE SEQRES 29 A 371 ALA GLU TRP ALA LYS VAL TYR MODRES 4WZZ MSE A 164 MET MODIFIED RESIDUE MODRES 4WZZ MSE A 196 MET MODIFIED RESIDUE MODRES 4WZZ MSE A 200 MET MODIFIED RESIDUE MODRES 4WZZ MSE A 249 MET MODIFIED RESIDUE MODRES 4WZZ MSE A 275 MET MODIFIED RESIDUE MODRES 4WZZ MSE A 290 MET MODIFIED RESIDUE HET MSE A 164 17 HET MSE A 196 17 HET MSE A 200 17 HET MSE A 249 34 HET MSE A 275 17 HET MSE A 290 17 HET RAM A 401 23 HET EDO A 402 10 HET EDO A 403 10 HETNAM MSE SELENOMETHIONINE HETNAM RAM ALPHA-L-RHAMNOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN RAM ALPHA-L-RHAMNOSE; 6-DEOXY-ALPHA-L-MANNOPYRANOSE; L- HETSYN 2 RAM RHAMNOSE; RHAMNOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 RAM C6 H12 O5 FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *305(H2 O) HELIX 1 AA1 ASN A 62 ASN A 79 1 18 HELIX 2 AA2 THR A 92 GLY A 107 1 16 HELIX 3 AA3 LEU A 121 GLN A 131 1 11 HELIX 4 AA4 ASN A 143 ARG A 147 5 5 HELIX 5 AA5 GLY A 155 SER A 171 1 17 HELIX 6 AA6 ALA A 186 MSE A 200 1 15 HELIX 7 AA7 GLN A 201 SER A 206 5 6 HELIX 8 AA8 GLU A 219 ASP A 234 1 16 HELIX 9 AA9 THR A 244 LYS A 258 1 15 HELIX 10 AB1 LEU A 271 ALA A 276 1 6 HELIX 11 AB2 ASP A 277 ILE A 279 5 3 HELIX 12 AB3 ASN A 294 ASN A 311 1 18 HELIX 13 AB4 ASN A 359 LYS A 365 1 7 SHEET 1 AA1 7 LYS A 82 GLN A 86 0 SHEET 2 AA1 7 THR A 52 ILE A 56 1 N TYR A 53 O LYS A 82 SHEET 3 AA1 7 CYS A 110 ILE A 113 1 O ALA A 112 N ALA A 54 SHEET 4 AA1 7 HIS A 134 LEU A 138 1 O LEU A 136 N ILE A 111 SHEET 5 AA1 7 PHE A 150 ASN A 152 1 O VAL A 151 N SER A 137 SHEET 6 AA1 7 THR A 345 ILE A 348 1 O ILE A 347 N ASN A 152 SHEET 7 AA1 7 THR A 338 ALA A 339 -1 N THR A 338 O GLU A 346 SHEET 1 AA2 4 LEU A 208 TYR A 215 0 SHEET 2 AA2 4 GLY A 175 SER A 181 1 N SER A 181 O TYR A 214 SHEET 3 AA2 4 VAL A 239 ALA A 242 1 O CYS A 241 N ALA A 178 SHEET 4 AA2 4 LYS A 265 GLY A 268 1 O THR A 267 N ALA A 242 SHEET 1 AA3 2 MSE A 290 LEU A 292 0 SHEET 2 AA3 2 PHE A 353 PHE A 355 -1 O PHE A 355 N MSE A 290 SHEET 1 AA4 2 SER A 321 THR A 323 0 SHEET 2 AA4 2 SER A 334 LYS A 336 -1 O TYR A 335 N PHE A 322 LINK C LEU A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N ASP A 165 1555 1555 1.33 LINK C GLY A 195 N MSE A 196 1555 1555 1.33 LINK C MSE A 196 N LYS A 197 1555 1555 1.32 LINK C VAL A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N GLN A 201 1555 1555 1.34 LINK C ILE A 248 N AMSE A 249 1555 1555 1.33 LINK C ILE A 248 N BMSE A 249 1555 1555 1.32 LINK C AMSE A 249 N ALA A 250 1555 1555 1.33 LINK C BMSE A 249 N ALA A 250 1555 1555 1.33 LINK C GLU A 274 N MSE A 275 1555 1555 1.33 LINK C MSE A 275 N ALA A 276 1555 1555 1.33 LINK C TYR A 289 N MSE A 290 1555 1555 1.33 LINK C MSE A 290 N PHE A 291 1555 1555 1.33 CRYST1 87.625 87.625 83.982 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011412 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011907 0.00000 CONECT 1700 1717 CONECT 1717 1700 1718 1725 CONECT 1718 1717 1719 1721 1726 CONECT 1719 1718 1720 1734 CONECT 1720 1719 CONECT 1721 1718 1722 1727 1728 CONECT 1722 1721 1723 1729 1730 CONECT 1723 1722 1724 CONECT 1724 1723 1731 1732 1733 CONECT 1725 1717 CONECT 1726 1718 CONECT 1727 1721 CONECT 1728 1721 CONECT 1729 1722 CONECT 1730 1722 CONECT 1731 1724 CONECT 1732 1724 CONECT 1733 1724 CONECT 1734 1719 CONECT 2141 2146 CONECT 2146 2141 2147 2154 CONECT 2147 2146 2148 2150 2155 CONECT 2148 2147 2149 2163 CONECT 2149 2148 CONECT 2150 2147 2151 2156 2157 CONECT 2151 2150 2152 2158 2159 CONECT 2152 2151 2153 CONECT 2153 2152 2160 2161 2162 CONECT 2154 2146 CONECT 2155 2147 CONECT 2156 2150 CONECT 2157 2150 CONECT 2158 2151 CONECT 2159 2151 CONECT 2160 2153 CONECT 2161 2153 CONECT 2162 2153 CONECT 2163 2148 CONECT 2201 2215 CONECT 2215 2201 2216 2223 CONECT 2216 2215 2217 2219 2224 CONECT 2217 2216 2218 2232 CONECT 2218 2217 CONECT 2219 2216 2220 2225 2226 CONECT 2220 2219 2221 2227 2228 CONECT 2221 2220 2222 CONECT 2222 2221 2229 2230 2231 CONECT 2223 2215 CONECT 2224 2216 CONECT 2225 2219 CONECT 2226 2219 CONECT 2227 2220 CONECT 2228 2220 CONECT 2229 2222 CONECT 2230 2222 CONECT 2231 2222 CONECT 2232 2217 CONECT 2942 2959 2960 CONECT 2959 2942 2961 2975 CONECT 2960 2942 2962 2976 CONECT 2961 2959 2963 2967 2977 CONECT 2962 2960 2964 2968 2978 CONECT 2963 2961 2965 2993 CONECT 2964 2962 2966 2993 CONECT 2965 2963 CONECT 2966 2964 CONECT 2967 2961 2969 2979 2981 CONECT 2968 2962 2970 2980 2982 CONECT 2969 2967 2971 2983 2985 CONECT 2970 2968 2972 2984 2986 CONECT 2971 2969 2973 CONECT 2972 2970 2974 CONECT 2973 2971 2987 2989 2991 CONECT 2974 2972 2988 2990 2992 CONECT 2975 2959 CONECT 2976 2960 CONECT 2977 2961 CONECT 2978 2962 CONECT 2979 2967 CONECT 2980 2968 CONECT 2981 2967 CONECT 2982 2968 CONECT 2983 2969 CONECT 2984 2970 CONECT 2985 2969 CONECT 2986 2970 CONECT 2987 2973 CONECT 2988 2974 CONECT 2989 2973 CONECT 2990 2974 CONECT 2991 2973 CONECT 2992 2974 CONECT 2993 2963 2964 CONECT 3348 3361 CONECT 3361 3348 3362 3369 CONECT 3362 3361 3363 3365 3370 CONECT 3363 3362 3364 3378 CONECT 3364 3363 CONECT 3365 3362 3366 3371 3372 CONECT 3366 3365 3367 3373 3374 CONECT 3367 3366 3368 CONECT 3368 3367 3375 3376 3377 CONECT 3369 3361 CONECT 3370 3362 CONECT 3371 3365 CONECT 3372 3365 CONECT 3373 3366 CONECT 3374 3366 CONECT 3375 3368 CONECT 3376 3368 CONECT 3377 3368 CONECT 3378 3363 CONECT 3556 3575 CONECT 3575 3556 3576 3583 CONECT 3576 3575 3577 3579 3584 CONECT 3577 3576 3578 3592 CONECT 3578 3577 CONECT 3579 3576 3580 3585 3586 CONECT 3580 3579 3581 3587 3588 CONECT 3581 3580 3582 CONECT 3582 3581 3589 3590 3591 CONECT 3583 3575 CONECT 3584 3576 CONECT 3585 3579 CONECT 3586 3579 CONECT 3587 3580 CONECT 3588 3580 CONECT 3589 3582 CONECT 3590 3582 CONECT 3591 3582 CONECT 3592 3577 CONECT 4722 4723 4728 4732 4733 CONECT 4723 4722 4724 4729 4734 CONECT 4724 4723 4725 4730 4735 CONECT 4725 4724 4726 4731 4736 CONECT 4726 4725 4727 4732 4737 CONECT 4727 4726 4738 4739 4740 CONECT 4728 4722 4741 CONECT 4729 4723 4742 CONECT 4730 4724 4743 CONECT 4731 4725 4744 CONECT 4732 4722 4726 CONECT 4733 4722 CONECT 4734 4723 CONECT 4735 4724 CONECT 4736 4725 CONECT 4737 4726 CONECT 4738 4727 CONECT 4739 4727 CONECT 4740 4727 CONECT 4741 4728 CONECT 4742 4729 CONECT 4743 4730 CONECT 4744 4731 CONECT 4745 4746 4747 4749 4750 CONECT 4746 4745 4751 CONECT 4747 4745 4748 4752 4753 CONECT 4748 4747 4754 CONECT 4749 4745 CONECT 4750 4745 CONECT 4751 4746 CONECT 4752 4747 CONECT 4753 4747 CONECT 4754 4748 CONECT 4755 4756 4757 4759 4760 CONECT 4756 4755 4761 CONECT 4757 4755 4758 4762 4763 CONECT 4758 4757 4764 CONECT 4759 4755 CONECT 4760 4755 CONECT 4761 4756 CONECT 4762 4757 CONECT 4763 4757 CONECT 4764 4758 MASTER 433 0 9 13 15 0 0 6 2690 1 174 29 END