data_4X1Q # _entry.id 4X1Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4X1Q WWPDB D_1000204909 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4X0W unspecified PDB . 4X1N unspecified PDB . 4N1P unspecified PDB . 4N1R unspecified PDB . 4N1S unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4X1Q _pdbx_database_status.recvd_initial_deposition_date 2014-11-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jiang, L.' 1 'Zhao, B.' 2 'Xu, P.' 3 'Andreasen, P.' 4 'Huang, M.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos One' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first e115872 _citation.page_last e115872 _citation.title 'A cyclic peptidic serine protease inhibitor: increasing affinity by increasing peptide flexibility.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0115872 _citation.pdbx_database_id_PubMed 25545505 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zhao, B.' 1 primary 'Xu, P.' 2 primary 'Jiang, L.' 3 primary 'Paaske, B.' 4 primary 'Kromann-Hansen, T.' 5 primary 'Jensen, J.K.' 6 primary 'Srensen, H.P.' 7 primary 'Liu, Z.' 8 primary 'Nielsen, J.T.' 9 primary 'Christensen, A.' 10 primary 'Hosseini, M.' 11 primary 'Srensen, K.K.' 12 primary 'Nielsen, N.C.' 13 primary 'Jensen, K.J.' 14 primary 'Huang, M.' 15 primary 'Andreasen, P.A.' 16 # _cell.entry_id 4X1Q _cell.length_a 122.105 _cell.length_b 122.105 _cell.length_c 42.546 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4X1Q _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn mupain-1 1191.358 1 ? ? ? ? 2 polymer man 'Urokinase-type plasminogen activator' 27869.742 1 3.4.21.73 'H99Y, C122A, N145Q' 'catalytic domain (UNP RESIDUES 179-425)' ? 3 water nat water 18.015 20 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name uPA # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no CPAYSRYLDC CPAYSRYLDC P ? 2 'polypeptide(L)' no no ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAYHNDIALLKIRSKEGRCAQPSRTIQTIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHTKE ; ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAYHNDIALLKIRSKEGRCAQPSRTIQTIALPSMYNDPQFGTSCEITGFGKEQSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHTKE ; U ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 PRO n 1 3 ALA n 1 4 TYR n 1 5 SER n 1 6 ARG n 1 7 TYR n 1 8 LEU n 1 9 ASP n 1 10 CYS n 2 1 ILE n 2 2 ILE n 2 3 GLY n 2 4 GLY n 2 5 GLU n 2 6 PHE n 2 7 THR n 2 8 THR n 2 9 ILE n 2 10 GLU n 2 11 ASN n 2 12 GLN n 2 13 PRO n 2 14 TRP n 2 15 PHE n 2 16 ALA n 2 17 ALA n 2 18 ILE n 2 19 TYR n 2 20 ARG n 2 21 ARG n 2 22 HIS n 2 23 ARG n 2 24 GLY n 2 25 GLY n 2 26 SER n 2 27 VAL n 2 28 THR n 2 29 TYR n 2 30 VAL n 2 31 CYS n 2 32 GLY n 2 33 GLY n 2 34 SER n 2 35 LEU n 2 36 ILE n 2 37 SER n 2 38 PRO n 2 39 CYS n 2 40 TRP n 2 41 VAL n 2 42 ILE n 2 43 SER n 2 44 ALA n 2 45 THR n 2 46 HIS n 2 47 CYS n 2 48 PHE n 2 49 ILE n 2 50 ASP n 2 51 TYR n 2 52 PRO n 2 53 LYS n 2 54 LYS n 2 55 GLU n 2 56 ASP n 2 57 TYR n 2 58 ILE n 2 59 VAL n 2 60 TYR n 2 61 LEU n 2 62 GLY n 2 63 ARG n 2 64 SER n 2 65 ARG n 2 66 LEU n 2 67 ASN n 2 68 SER n 2 69 ASN n 2 70 THR n 2 71 GLN n 2 72 GLY n 2 73 GLU n 2 74 MET n 2 75 LYS n 2 76 PHE n 2 77 GLU n 2 78 VAL n 2 79 GLU n 2 80 ASN n 2 81 LEU n 2 82 ILE n 2 83 LEU n 2 84 HIS n 2 85 LYS n 2 86 ASP n 2 87 TYR n 2 88 SER n 2 89 ALA n 2 90 ASP n 2 91 THR n 2 92 LEU n 2 93 ALA n 2 94 TYR n 2 95 HIS n 2 96 ASN n 2 97 ASP n 2 98 ILE n 2 99 ALA n 2 100 LEU n 2 101 LEU n 2 102 LYS n 2 103 ILE n 2 104 ARG n 2 105 SER n 2 106 LYS n 2 107 GLU n 2 108 GLY n 2 109 ARG n 2 110 CYS n 2 111 ALA n 2 112 GLN n 2 113 PRO n 2 114 SER n 2 115 ARG n 2 116 THR n 2 117 ILE n 2 118 GLN n 2 119 THR n 2 120 ILE n 2 121 ALA n 2 122 LEU n 2 123 PRO n 2 124 SER n 2 125 MET n 2 126 TYR n 2 127 ASN n 2 128 ASP n 2 129 PRO n 2 130 GLN n 2 131 PHE n 2 132 GLY n 2 133 THR n 2 134 SER n 2 135 CYS n 2 136 GLU n 2 137 ILE n 2 138 THR n 2 139 GLY n 2 140 PHE n 2 141 GLY n 2 142 LYS n 2 143 GLU n 2 144 GLN n 2 145 SER n 2 146 THR n 2 147 ASP n 2 148 TYR n 2 149 LEU n 2 150 TYR n 2 151 PRO n 2 152 GLU n 2 153 GLN n 2 154 LEU n 2 155 LYS n 2 156 MET n 2 157 THR n 2 158 VAL n 2 159 VAL n 2 160 LYS n 2 161 LEU n 2 162 ILE n 2 163 SER n 2 164 HIS n 2 165 ARG n 2 166 GLU n 2 167 CYS n 2 168 GLN n 2 169 GLN n 2 170 PRO n 2 171 HIS n 2 172 TYR n 2 173 TYR n 2 174 GLY n 2 175 SER n 2 176 GLU n 2 177 VAL n 2 178 THR n 2 179 THR n 2 180 LYS n 2 181 MET n 2 182 LEU n 2 183 CYS n 2 184 ALA n 2 185 ALA n 2 186 ASP n 2 187 PRO n 2 188 GLN n 2 189 TRP n 2 190 LYS n 2 191 THR n 2 192 ASP n 2 193 SER n 2 194 CYS n 2 195 GLN n 2 196 GLY n 2 197 ASP n 2 198 SER n 2 199 GLY n 2 200 GLY n 2 201 PRO n 2 202 LEU n 2 203 VAL n 2 204 CYS n 2 205 SER n 2 206 LEU n 2 207 GLN n 2 208 GLY n 2 209 ARG n 2 210 MET n 2 211 THR n 2 212 LEU n 2 213 THR n 2 214 GLY n 2 215 ILE n 2 216 VAL n 2 217 SER n 2 218 TRP n 2 219 GLY n 2 220 ARG n 2 221 GLY n 2 222 CYS n 2 223 ALA n 2 224 LEU n 2 225 LYS n 2 226 ASP n 2 227 LYS n 2 228 PRO n 2 229 GLY n 2 230 VAL n 2 231 TYR n 2 232 THR n 2 233 ARG n 2 234 VAL n 2 235 SER n 2 236 HIS n 2 237 PHE n 2 238 LEU n 2 239 PRO n 2 240 TRP n 2 241 ILE n 2 242 ARG n 2 243 SER n 2 244 HIS n 2 245 THR n 2 246 LYS n 2 247 GLU n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 247 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PLAU _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.seq_align _struct_ref.seq_dif _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end 4X1Q PDB ? 1 1 ? ? 4X1Q ? ? 1 ? UROK_HUMAN UNP ? 2 2 ? ? P00749 ? ;IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW IRSHTKE ; 179 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4X1Q P 1 ? 10 ? 4X1Q 1 ? 10 ? 1 10 2 2 4X1Q U 1 ? 247 ? P00749 179 ? 425 ? 16 244 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 4X1Q TYR U 94 ? UNP P00749 HIS 272 'engineered mutation' 99 1 2 4X1Q ALA U 121 ? UNP P00749 CYS 299 'engineered mutation' 122 2 2 4X1Q GLN U 144 ? UNP P00749 ASN 322 'engineered mutation' 145 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4X1Q _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0M ammonium sulfate, 50mM sodium citrate pH 4.6, 5% PEG 400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-01-25 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4X1Q _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.28 _reflns.d_resolution_low 60 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 10700 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 34.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4X1Q _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10186 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 60.00 _refine.ls_d_res_high 2.28 _refine.ls_percent_reflns_obs 99.42 _refine.ls_R_factor_obs 0.20886 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20521 _refine.ls_R_factor_R_free 0.28680 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 510 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.893 _refine.B_iso_mean 44.220 _refine.aniso_B[1][1] -0.82 _refine.aniso_B[2][2] -0.82 _refine.aniso_B[3][3] 1.23 _refine.aniso_B[1][2] -0.41 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.491 _refine.pdbx_overall_ESU_R_Free 0.300 _refine.overall_SU_ML 0.225 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.091 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2034 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 20 _refine_hist.number_atoms_total 2054 _refine_hist.d_res_high 2.28 _refine_hist.d_res_low 60.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2098 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.749 1.949 ? 2846 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.336 5.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.964 23.152 ? 92 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 19.805 15.000 ? 353 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.434 15.000 ? 14 'X-RAY DIFFRACTION' ? r_chiral_restr 0.124 0.200 ? 304 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1585 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.169 1.500 ? 1280 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.202 2.000 ? 2070 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.911 3.000 ? 818 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.753 4.500 ? 776 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.284 _refine_ls_shell.d_res_low 2.343 _refine_ls_shell.number_reflns_R_work 753 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs 97.16 _refine_ls_shell.R_factor_R_free 0.378 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4X1Q _struct.title 'The crystal structure of mupain-1 in complex with murinised human uPA at pH7.4' _struct.pdbx_descriptor 'mupain-1, urokinase-type plasminogen activator (E.C.3.4.21.73)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4X1Q _struct_keywords.text 'Serine protease, peptidic inhibitor, uPA, HYDROLASE INHIBITOR-HYDROLASE complex' _struct_keywords.pdbx_keywords 'HYDROLASE INHIBITOR/HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR B 8 ? GLN B 12 ? THR U 23 GLN U 27 5 ? 5 HELX_P HELX_P2 AA2 ALA B 44 ? PHE B 48 ? ALA U 55 PHE U 59 5 ? 5 HELX_P HELX_P3 AA3 LYS B 53 ? GLU B 55 A LYS U 61 GLU U 62 5 ? 3 HELX_P HELX_P4 AA4 SER B 163 ? GLN B 168 ? SER U 164 GLN U 169 1 ? 6 HELX_P HELX_P5 AA5 TYR B 173 ? VAL B 177 ? TYR U 172 VAL U 176 5 ? 5 HELX_P HELX_P6 AA6 PHE B 237 ? LYS B 246 ? PHE U 234 LYS U 243 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 10 SG ? ? P CYS 1 P CYS 10 1_555 ? ? ? ? ? ? ? 2.068 ? disulf2 disulf ? ? B CYS 31 SG A ? ? 1_555 B CYS 47 SG ? ? U CYS 42 U CYS 58 1_555 ? ? ? ? ? ? ? 2.028 ? disulf3 disulf ? ? B CYS 31 SG B ? ? 1_555 B CYS 47 SG ? ? U CYS 42 U CYS 58 1_555 ? ? ? ? ? ? ? 2.112 ? disulf4 disulf ? ? B CYS 39 SG ? ? ? 1_555 B CYS 110 SG ? ? U CYS 50 U CYS 111 1_555 ? ? ? ? ? ? ? 2.058 ? disulf5 disulf ? ? B CYS 135 SG ? ? ? 1_555 B CYS 204 SG ? ? U CYS 136 U CYS 201 1_555 ? ? ? ? ? ? ? 1.995 ? disulf6 disulf ? ? B CYS 167 SG ? ? ? 1_555 B CYS 183 SG ? ? U CYS 168 U CYS 182 1_555 ? ? ? ? ? ? ? 2.035 ? disulf7 disulf ? ? B CYS 194 SG ? ? ? 1_555 B CYS 222 SG ? ? U CYS 191 U CYS 220 1_555 ? ? ? ? ? ? ? 2.080 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU B 5 ? PHE B 6 ? GLU U 20 PHE U 21 AA1 2 LYS B 155 ? ILE B 162 ? LYS U 156 ILE U 163 AA1 3 MET B 181 ? ALA B 185 ? MET U 180 ALA U 184 AA1 4 GLY B 229 ? ARG B 233 ? GLY U 226 ARG U 230 AA1 5 ARG B 209 ? TRP B 218 ? ARG U 206 TRP U 215 AA1 6 PRO B 201 ? LEU B 206 ? PRO U 198 LEU U 203 AA1 7 SER B 134 ? GLY B 139 ? SER U 135 GLY U 140 AA1 8 LYS B 155 ? ILE B 162 ? LYS U 156 ILE U 163 AA2 1 PHE B 15 ? ARG B 21 ? PHE U 30 ARG U 36 AA2 2 VAL B 27 ? SER B 37 ? VAL U 38 SER U 48 AA2 3 TRP B 40 ? SER B 43 ? TRP U 51 SER U 54 AA2 4 ALA B 99 ? ARG B 104 ? ALA U 104 ARG U 109 AA2 5 MET B 74 ? LEU B 83 ? MET U 81 LEU U 90 AA2 6 TYR B 57 ? LEU B 61 ? TYR U 64 LEU U 68 AA2 7 PHE B 15 ? ARG B 21 ? PHE U 30 ARG U 36 AA3 1 SER B 88 ? ALA B 89 ? SER U 95 ALA U 96 AA3 2 TYR B 94 ? HIS B 95 ? TYR U 99 HIS U 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU B 5 ? N GLU U 20 O MET B 156 ? O MET U 157 AA1 2 3 N ILE B 162 ? N ILE U 163 O CYS B 183 ? O CYS U 182 AA1 3 4 N LEU B 182 ? N LEU U 181 O TYR B 231 ? O TYR U 228 AA1 4 5 O VAL B 230 ? O VAL U 227 N TRP B 218 ? N TRP U 215 AA1 5 6 O THR B 211 ? O THR U 208 N CYS B 204 ? N CYS U 201 AA1 6 7 O VAL B 203 ? O VAL U 200 N GLU B 136 ? N GLU U 137 AA1 7 8 N CYS B 135 ? N CYS U 136 O VAL B 159 ? O VAL U 160 AA2 1 2 N ILE B 18 ? N ILE U 33 O VAL B 30 ? O VAL U 41 AA2 2 3 N SER B 34 ? N SER U 45 O ILE B 42 ? O ILE U 53 AA2 3 4 N VAL B 41 ? N VAL U 52 O LEU B 101 ? O LEU U 106 AA2 4 5 O LYS B 102 ? O LYS U 107 N GLU B 79 ? N GLU U 86 AA2 5 6 O PHE B 76 ? O PHE U 83 N VAL B 59 ? N VAL U 66 AA2 6 7 O ILE B 58 ? O ILE U 65 N TYR B 19 ? N TYR U 34 AA3 1 2 N SER B 88 ? N SER U 95 O HIS B 95 ? O HIS U 100 # _atom_sites.entry_id 4X1Q _atom_sites.fract_transf_matrix[1][1] 0.008190 _atom_sites.fract_transf_matrix[1][2] 0.004728 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009457 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023504 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 1 1 CYS CYS P . n A 1 2 PRO 2 2 2 PRO PRO P . n A 1 3 ALA 3 3 3 ALA ALA P . n A 1 4 TYR 4 4 4 TYR TYR P . n A 1 5 SER 5 5 5 SER SER P . n A 1 6 ARG 6 6 6 ARG ARG P . n A 1 7 TYR 7 7 7 TYR TYR P . n A 1 8 LEU 8 8 8 LEU LEU P . n A 1 9 ASP 9 9 9 ASP ASP P . n A 1 10 CYS 10 10 10 CYS CYS P . n B 2 1 ILE 1 16 16 ILE ILE U . n B 2 2 ILE 2 17 17 ILE ILE U . n B 2 3 GLY 3 18 18 GLY GLY U . n B 2 4 GLY 4 19 19 GLY GLY U . n B 2 5 GLU 5 20 20 GLU GLU U . n B 2 6 PHE 6 21 21 PHE PHE U . n B 2 7 THR 7 22 22 THR THR U . n B 2 8 THR 8 23 23 THR THR U . n B 2 9 ILE 9 24 24 ILE ILE U . n B 2 10 GLU 10 25 25 GLU GLU U . n B 2 11 ASN 11 26 26 ASN ASN U . n B 2 12 GLN 12 27 27 GLN GLN U . n B 2 13 PRO 13 28 28 PRO PRO U . n B 2 14 TRP 14 29 29 TRP TRP U . n B 2 15 PHE 15 30 30 PHE PHE U . n B 2 16 ALA 16 31 31 ALA ALA U . n B 2 17 ALA 17 32 32 ALA ALA U . n B 2 18 ILE 18 33 33 ILE ILE U . n B 2 19 TYR 19 34 34 TYR TYR U . n B 2 20 ARG 20 35 35 ARG ARG U . n B 2 21 ARG 21 36 36 ARG ARG U . n B 2 22 HIS 22 37 37 HIS HIS U . n B 2 23 ARG 23 37 37 ARG ARG U A n B 2 24 GLY 24 37 37 GLY GLY U B n B 2 25 GLY 25 37 37 GLY GLY U C n B 2 26 SER 26 37 37 SER SER U D n B 2 27 VAL 27 38 38 VAL VAL U . n B 2 28 THR 28 39 39 THR THR U . n B 2 29 TYR 29 40 40 TYR TYR U . n B 2 30 VAL 30 41 41 VAL VAL U . n B 2 31 CYS 31 42 42 CYS CYS U . n B 2 32 GLY 32 43 43 GLY GLY U . n B 2 33 GLY 33 44 44 GLY GLY U . n B 2 34 SER 34 45 45 SER SER U . n B 2 35 LEU 35 46 46 LEU LEU U . n B 2 36 ILE 36 47 47 ILE ILE U . n B 2 37 SER 37 48 48 SER SER U . n B 2 38 PRO 38 49 49 PRO PRO U . n B 2 39 CYS 39 50 50 CYS CYS U . n B 2 40 TRP 40 51 51 TRP TRP U . n B 2 41 VAL 41 52 52 VAL VAL U . n B 2 42 ILE 42 53 53 ILE ILE U . n B 2 43 SER 43 54 54 SER SER U . n B 2 44 ALA 44 55 55 ALA ALA U . n B 2 45 THR 45 56 56 THR THR U . n B 2 46 HIS 46 57 57 HIS HIS U . n B 2 47 CYS 47 58 58 CYS CYS U . n B 2 48 PHE 48 59 59 PHE PHE U . n B 2 49 ILE 49 60 60 ILE ILE U . n B 2 50 ASP 50 60 60 ASP ASP U A n B 2 51 TYR 51 60 60 TYR TYR U B n B 2 52 PRO 52 60 60 PRO PRO U C n B 2 53 LYS 53 61 61 LYS LYS U . n B 2 54 LYS 54 62 62 LYS LYS U . n B 2 55 GLU 55 62 62 GLU GLU U A n B 2 56 ASP 56 63 63 ASP ASP U . n B 2 57 TYR 57 64 64 TYR TYR U . n B 2 58 ILE 58 65 65 ILE ILE U . n B 2 59 VAL 59 66 66 VAL VAL U . n B 2 60 TYR 60 67 67 TYR TYR U . n B 2 61 LEU 61 68 68 LEU LEU U . n B 2 62 GLY 62 69 69 GLY GLY U . n B 2 63 ARG 63 70 70 ARG ARG U . n B 2 64 SER 64 71 71 SER SER U . n B 2 65 ARG 65 72 72 ARG ARG U . n B 2 66 LEU 66 73 73 LEU LEU U . n B 2 67 ASN 67 74 74 ASN ASN U . n B 2 68 SER 68 75 75 SER SER U . n B 2 69 ASN 69 76 76 ASN ASN U . n B 2 70 THR 70 77 77 THR THR U . n B 2 71 GLN 71 78 78 GLN GLN U . n B 2 72 GLY 72 79 79 GLY GLY U . n B 2 73 GLU 73 80 80 GLU GLU U . n B 2 74 MET 74 81 81 MET MET U . n B 2 75 LYS 75 82 82 LYS LYS U . n B 2 76 PHE 76 83 83 PHE PHE U . n B 2 77 GLU 77 84 84 GLU GLU U . n B 2 78 VAL 78 85 85 VAL VAL U . n B 2 79 GLU 79 86 86 GLU GLU U . n B 2 80 ASN 80 87 87 ASN ASN U . n B 2 81 LEU 81 88 88 LEU LEU U . n B 2 82 ILE 82 89 89 ILE ILE U . n B 2 83 LEU 83 90 90 LEU LEU U . n B 2 84 HIS 84 91 91 HIS HIS U . n B 2 85 LYS 85 92 92 LYS LYS U . n B 2 86 ASP 86 93 93 ASP ASP U . n B 2 87 TYR 87 94 94 TYR TYR U . n B 2 88 SER 88 95 95 SER SER U . n B 2 89 ALA 89 96 96 ALA ALA U . n B 2 90 ASP 90 97 97 ASP ASP U . n B 2 91 THR 91 97 97 THR THR U A n B 2 92 LEU 92 97 97 LEU LEU U B n B 2 93 ALA 93 98 98 ALA ALA U . n B 2 94 TYR 94 99 99 TYR TYR U . n B 2 95 HIS 95 100 100 HIS HIS U . n B 2 96 ASN 96 101 101 ASN ASN U . n B 2 97 ASP 97 102 102 ASP ASP U . n B 2 98 ILE 98 103 103 ILE ILE U . n B 2 99 ALA 99 104 104 ALA ALA U . n B 2 100 LEU 100 105 105 LEU LEU U . n B 2 101 LEU 101 106 106 LEU LEU U . n B 2 102 LYS 102 107 107 LYS LYS U . n B 2 103 ILE 103 108 108 ILE ILE U . n B 2 104 ARG 104 109 109 ARG ARG U . n B 2 105 SER 105 110 110 SER SER U . n B 2 106 LYS 106 110 110 LYS LYS U A n B 2 107 GLU 107 110 110 GLU GLU U B n B 2 108 GLY 108 110 110 GLY GLY U C n B 2 109 ARG 109 110 110 ARG ARG U D n B 2 110 CYS 110 111 111 CYS CYS U . n B 2 111 ALA 111 112 112 ALA ALA U . n B 2 112 GLN 112 113 113 GLN GLN U . n B 2 113 PRO 113 114 114 PRO PRO U . n B 2 114 SER 114 115 115 SER SER U . n B 2 115 ARG 115 116 116 ARG ARG U . n B 2 116 THR 116 117 117 THR THR U . n B 2 117 ILE 117 118 118 ILE ILE U . n B 2 118 GLN 118 119 119 GLN GLN U . n B 2 119 THR 119 120 120 THR THR U . n B 2 120 ILE 120 121 121 ILE ILE U . n B 2 121 ALA 121 122 122 ALA ALA U . n B 2 122 LEU 122 123 123 LEU LEU U . n B 2 123 PRO 123 124 124 PRO PRO U . n B 2 124 SER 124 125 125 SER SER U . n B 2 125 MET 125 126 126 MET MET U . n B 2 126 TYR 126 127 127 TYR TYR U . n B 2 127 ASN 127 128 128 ASN ASN U . n B 2 128 ASP 128 129 129 ASP ASP U . n B 2 129 PRO 129 130 130 PRO PRO U . n B 2 130 GLN 130 131 131 GLN GLN U . n B 2 131 PHE 131 132 132 PHE PHE U . n B 2 132 GLY 132 133 133 GLY GLY U . n B 2 133 THR 133 134 134 THR THR U . n B 2 134 SER 134 135 135 SER SER U . n B 2 135 CYS 135 136 136 CYS CYS U . n B 2 136 GLU 136 137 137 GLU GLU U . n B 2 137 ILE 137 138 138 ILE ILE U . n B 2 138 THR 138 139 139 THR THR U . n B 2 139 GLY 139 140 140 GLY GLY U . n B 2 140 PHE 140 141 141 PHE PHE U . n B 2 141 GLY 141 142 142 GLY GLY U . n B 2 142 LYS 142 143 143 LYS LYS U . n B 2 143 GLU 143 144 144 GLU GLU U . n B 2 144 GLN 144 145 145 GLN GLN U . n B 2 145 SER 145 146 146 SER SER U . n B 2 146 THR 146 147 147 THR THR U . n B 2 147 ASP 147 148 148 ASP ASP U . n B 2 148 TYR 148 149 149 TYR TYR U . n B 2 149 LEU 149 150 150 LEU LEU U . n B 2 150 TYR 150 151 151 TYR TYR U . n B 2 151 PRO 151 152 152 PRO PRO U . n B 2 152 GLU 152 153 153 GLU GLU U . n B 2 153 GLN 153 154 154 GLN GLN U . n B 2 154 LEU 154 155 155 LEU LEU U . n B 2 155 LYS 155 156 156 LYS LYS U . n B 2 156 MET 156 157 157 MET MET U . n B 2 157 THR 157 158 158 THR THR U . n B 2 158 VAL 158 159 159 VAL VAL U . n B 2 159 VAL 159 160 160 VAL VAL U . n B 2 160 LYS 160 161 161 LYS LYS U . n B 2 161 LEU 161 162 162 LEU LEU U . n B 2 162 ILE 162 163 163 ILE ILE U . n B 2 163 SER 163 164 164 SER SER U . n B 2 164 HIS 164 165 165 HIS HIS U . n B 2 165 ARG 165 166 166 ARG ARG U . n B 2 166 GLU 166 167 167 GLU GLU U . n B 2 167 CYS 167 168 168 CYS CYS U . n B 2 168 GLN 168 169 169 GLN GLN U . n B 2 169 GLN 169 170 170 GLN GLN U . n B 2 170 PRO 170 170 170 PRO PRO U A n B 2 171 HIS 171 170 170 HIS HIS U B n B 2 172 TYR 172 171 171 TYR TYR U . n B 2 173 TYR 173 172 172 TYR TYR U . n B 2 174 GLY 174 173 173 GLY GLY U . n B 2 175 SER 175 174 174 SER SER U . n B 2 176 GLU 176 175 175 GLU GLU U . n B 2 177 VAL 177 176 176 VAL VAL U . n B 2 178 THR 178 177 177 THR THR U . n B 2 179 THR 179 178 178 THR THR U . n B 2 180 LYS 180 179 179 LYS LYS U . n B 2 181 MET 181 180 180 MET MET U . n B 2 182 LEU 182 181 181 LEU LEU U . n B 2 183 CYS 183 182 182 CYS CYS U . n B 2 184 ALA 184 183 183 ALA ALA U . n B 2 185 ALA 185 184 184 ALA ALA U . n B 2 186 ASP 186 185 185 ASP ASP U . n B 2 187 PRO 187 185 185 PRO PRO U A n B 2 188 GLN 188 185 185 GLN GLN U B n B 2 189 TRP 189 186 186 TRP TRP U . n B 2 190 LYS 190 187 187 LYS LYS U . n B 2 191 THR 191 188 188 THR THR U . n B 2 192 ASP 192 189 189 ASP ASP U . n B 2 193 SER 193 190 190 SER SER U . n B 2 194 CYS 194 191 191 CYS CYS U . n B 2 195 GLN 195 192 192 GLN GLN U . n B 2 196 GLY 196 193 193 GLY GLY U . n B 2 197 ASP 197 194 194 ASP ASP U . n B 2 198 SER 198 195 195 SER SER U . n B 2 199 GLY 199 196 196 GLY GLY U . n B 2 200 GLY 200 197 197 GLY GLY U . n B 2 201 PRO 201 198 198 PRO PRO U . n B 2 202 LEU 202 199 199 LEU LEU U . n B 2 203 VAL 203 200 200 VAL VAL U . n B 2 204 CYS 204 201 201 CYS CYS U . n B 2 205 SER 205 202 202 SER SER U . n B 2 206 LEU 206 203 203 LEU LEU U . n B 2 207 GLN 207 204 204 GLN GLN U . n B 2 208 GLY 208 205 205 GLY GLY U . n B 2 209 ARG 209 206 206 ARG ARG U . n B 2 210 MET 210 207 207 MET MET U . n B 2 211 THR 211 208 208 THR THR U . n B 2 212 LEU 212 209 209 LEU LEU U . n B 2 213 THR 213 210 210 THR THR U . n B 2 214 GLY 214 211 211 GLY GLY U . n B 2 215 ILE 215 212 212 ILE ILE U . n B 2 216 VAL 216 213 213 VAL VAL U . n B 2 217 SER 217 214 214 SER SER U . n B 2 218 TRP 218 215 215 TRP TRP U . n B 2 219 GLY 219 216 216 GLY GLY U . n B 2 220 ARG 220 217 217 ARG ARG U . n B 2 221 GLY 221 219 219 GLY GLY U . n B 2 222 CYS 222 220 220 CYS CYS U . n B 2 223 ALA 223 221 221 ALA ALA U . n B 2 224 LEU 224 222 222 LEU LEU U . n B 2 225 LYS 225 223 223 LYS LYS U . n B 2 226 ASP 226 223 223 ASP ASP U A n B 2 227 LYS 227 224 224 LYS LYS U . n B 2 228 PRO 228 225 225 PRO PRO U . n B 2 229 GLY 229 226 226 GLY GLY U . n B 2 230 VAL 230 227 227 VAL VAL U . n B 2 231 TYR 231 228 228 TYR TYR U . n B 2 232 THR 232 229 229 THR THR U . n B 2 233 ARG 233 230 230 ARG ARG U . n B 2 234 VAL 234 231 231 VAL VAL U . n B 2 235 SER 235 232 232 SER SER U . n B 2 236 HIS 236 233 233 HIS HIS U . n B 2 237 PHE 237 234 234 PHE PHE U . n B 2 238 LEU 238 235 235 LEU LEU U . n B 2 239 PRO 239 236 236 PRO PRO U . n B 2 240 TRP 240 237 237 TRP TRP U . n B 2 241 ILE 241 238 238 ILE ILE U . n B 2 242 ARG 242 239 239 ARG ARG U . n B 2 243 SER 243 240 240 SER SER U . n B 2 244 HIS 244 241 241 HIS HIS U . n B 2 245 THR 245 242 242 THR THR U . n B 2 246 LYS 246 243 243 LYS LYS U . n B 2 247 GLU 247 244 244 GLU GLU U . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 301 17 HOH HOH U . C 3 HOH 2 302 18 HOH HOH U . C 3 HOH 3 303 6 HOH HOH U . C 3 HOH 4 304 1 HOH HOH U . C 3 HOH 5 305 2 HOH HOH U . C 3 HOH 6 306 3 HOH HOH U . C 3 HOH 7 307 4 HOH HOH U . C 3 HOH 8 308 5 HOH HOH U . C 3 HOH 9 309 7 HOH HOH U . C 3 HOH 10 310 8 HOH HOH U . C 3 HOH 11 311 9 HOH HOH U . C 3 HOH 12 312 10 HOH HOH U . C 3 HOH 13 313 11 HOH HOH U . C 3 HOH 14 314 12 HOH HOH U . C 3 HOH 15 315 13 HOH HOH U . C 3 HOH 16 316 14 HOH HOH U . C 3 HOH 17 317 15 HOH HOH U . C 3 HOH 18 318 16 HOH HOH U . C 3 HOH 19 319 19 HOH HOH U . C 3 HOH 20 320 20 HOH HOH U . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1470 ? 1 MORE -5 ? 1 'SSA (A^2)' 11140 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-25 2 'Structure model' 1 1 2015-11-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Experimental preparation' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.5.0110 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 2 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG _pdbx_validate_close_contact.auth_asym_id_1 P _pdbx_validate_close_contact.auth_comp_id_1 SER _pdbx_validate_close_contact.auth_seq_id_1 5 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OH _pdbx_validate_close_contact.auth_asym_id_2 U _pdbx_validate_close_contact.auth_comp_id_2 TYR _pdbx_validate_close_contact.auth_seq_id_2 99 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OD1 _pdbx_validate_symm_contact.auth_asym_id_1 U _pdbx_validate_symm_contact.auth_comp_id_1 ASN _pdbx_validate_symm_contact.auth_seq_id_1 76 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 NH1 _pdbx_validate_symm_contact.auth_asym_id_2 U _pdbx_validate_symm_contact.auth_comp_id_2 ARG _pdbx_validate_symm_contact.auth_seq_id_2 206 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_444 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 U _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 181 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 U _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 181 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 U _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 181 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 130.55 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 15.25 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN U 27 ? ? -143.18 55.14 2 1 VAL U 41 ? ? -105.23 -60.02 3 1 VAL U 41 ? ? -105.23 -61.98 4 1 SER U 54 ? ? -159.66 -157.56 5 1 TYR U 127 ? ? 58.05 1.63 6 1 SER U 214 ? ? -120.86 -61.12 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'the National Natural Science Foundation of China' China 31161130356 1 'the National Natural Science Foundation of China' China 30770429 2 'the Natural Science Foundation of Fujian Province' China 2012J05071 3 'the Danish National Research Foundation' Denmark 26-331-6 4 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #