HEADER TRANSFERASE 02-DEC-14 4X45 TITLE CRYSTAL STRUCTURE OF F173G MUTANT OF HUMAN APRT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENINE PHOSPHORIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: APRT; COMPND 5 EC: 2.4.2.7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: APRT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET29A KEYWDS APRT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.M.PEREIRA,A.PIMENTA,G.MERCALDI,O.H.THIEMANN REVDAT 2 28-FEB-24 4X45 1 REMARK REVDAT 1 02-DEC-15 4X45 0 JRNL AUTH A.PIMENTA,H.M.PEREIRA,G.MERDALDI,O.H.THIEMANN JRNL TITL CRYSTAL STRUCTURE OF F173G MUTANT OF HUMAN APRT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 33512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4700 - 4.0058 0.97 2822 156 0.1594 0.1629 REMARK 3 2 4.0058 - 3.1797 0.99 2749 146 0.1573 0.1958 REMARK 3 3 3.1797 - 2.7779 0.99 2721 151 0.1805 0.2254 REMARK 3 4 2.7779 - 2.5239 0.99 2674 156 0.1857 0.1872 REMARK 3 5 2.5239 - 2.3430 0.98 2678 121 0.1734 0.1940 REMARK 3 6 2.3430 - 2.2049 0.97 2605 162 0.1806 0.1856 REMARK 3 7 2.2049 - 2.0944 0.97 2614 127 0.1860 0.2277 REMARK 3 8 2.0944 - 2.0033 0.97 2599 146 0.1956 0.2356 REMARK 3 9 2.0033 - 1.9261 0.96 2591 123 0.2027 0.2349 REMARK 3 10 1.9261 - 1.8597 0.97 2604 127 0.2104 0.2270 REMARK 3 11 1.8597 - 1.8015 0.97 2603 126 0.2373 0.2515 REMARK 3 12 1.8015 - 1.7500 0.97 2573 138 0.2795 0.2934 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2767 REMARK 3 ANGLE : 0.887 3753 REMARK 3 CHIRALITY : 0.059 430 REMARK 3 PLANARITY : 0.004 485 REMARK 3 DIHEDRAL : 14.000 1050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3991 -5.7378 20.8080 REMARK 3 T TENSOR REMARK 3 T11: 0.3670 T22: 0.2627 REMARK 3 T33: 0.2958 T12: 0.0063 REMARK 3 T13: 0.0086 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 3.1597 L22: 5.4360 REMARK 3 L33: 7.2352 L12: 0.2025 REMARK 3 L13: -1.1208 L23: 2.4221 REMARK 3 S TENSOR REMARK 3 S11: -0.2883 S12: -0.3294 S13: -0.6900 REMARK 3 S21: 0.6178 S22: 0.0801 S23: -0.1940 REMARK 3 S31: 1.6502 S32: 0.1536 S33: 0.1418 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0796 5.8603 28.8058 REMARK 3 T TENSOR REMARK 3 T11: 0.1338 T22: 0.1752 REMARK 3 T33: 0.1649 T12: 0.0087 REMARK 3 T13: 0.0079 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.8129 L22: 0.3067 REMARK 3 L33: 0.5128 L12: -0.9813 REMARK 3 L13: -1.2015 L23: 0.1910 REMARK 3 S TENSOR REMARK 3 S11: -0.1968 S12: 0.0514 S13: 0.1178 REMARK 3 S21: 0.1552 S22: 0.1068 S23: 0.0298 REMARK 3 S31: 0.0097 S32: 0.0090 S33: 0.0974 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5273 1.9378 10.3741 REMARK 3 T TENSOR REMARK 3 T11: 0.1210 T22: 0.1138 REMARK 3 T33: 0.1094 T12: -0.0105 REMARK 3 T13: 0.0124 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.7107 L22: 0.6223 REMARK 3 L33: 3.9542 L12: 0.2820 REMARK 3 L13: 0.5938 L23: -0.2406 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: 0.0162 S13: -0.1516 REMARK 3 S21: -0.0691 S22: 0.0402 S23: -0.0793 REMARK 3 S31: 0.2171 S32: 0.1591 S33: -0.0195 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6805 12.5643 10.1619 REMARK 3 T TENSOR REMARK 3 T11: 0.1148 T22: 0.1291 REMARK 3 T33: 0.1566 T12: -0.0127 REMARK 3 T13: -0.0059 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.5329 L22: 1.5833 REMARK 3 L33: 2.3332 L12: 0.1438 REMARK 3 L13: 0.3237 L23: -0.3218 REMARK 3 S TENSOR REMARK 3 S11: 0.0303 S12: -0.0682 S13: 0.1219 REMARK 3 S21: 0.0577 S22: -0.0152 S23: 0.0267 REMARK 3 S31: -0.0786 S32: 0.1180 S33: -0.0304 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0817 24.6398 12.7834 REMARK 3 T TENSOR REMARK 3 T11: 0.2020 T22: 0.1634 REMARK 3 T33: 0.1803 T12: 0.0159 REMARK 3 T13: -0.0478 T23: -0.0475 REMARK 3 L TENSOR REMARK 3 L11: 1.3115 L22: 1.9984 REMARK 3 L33: 0.5097 L12: -0.8024 REMARK 3 L13: -0.7338 L23: 0.5588 REMARK 3 S TENSOR REMARK 3 S11: -0.1629 S12: -0.1977 S13: 0.0744 REMARK 3 S21: 0.2499 S22: 0.0339 S23: 0.1148 REMARK 3 S31: -0.0916 S32: 0.0259 S33: 0.1110 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7620 25.9652 15.7364 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.2419 REMARK 3 T33: 0.4290 T12: 0.0389 REMARK 3 T13: -0.0090 T23: -0.0550 REMARK 3 L TENSOR REMARK 3 L11: 3.8027 L22: 1.5090 REMARK 3 L33: 3.0707 L12: 1.9731 REMARK 3 L13: -2.5890 L23: -1.3218 REMARK 3 S TENSOR REMARK 3 S11: 0.1467 S12: -0.3472 S13: 0.6649 REMARK 3 S21: 0.1954 S22: 0.1524 S23: 0.8148 REMARK 3 S31: -0.0061 S32: -0.2301 S33: -0.1360 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0781 17.5140 6.7679 REMARK 3 T TENSOR REMARK 3 T11: 0.1659 T22: 0.1515 REMARK 3 T33: 0.1795 T12: 0.0147 REMARK 3 T13: -0.0495 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.2550 L22: 1.6526 REMARK 3 L33: 0.5463 L12: 0.0556 REMARK 3 L13: 0.1410 L23: 0.7752 REMARK 3 S TENSOR REMARK 3 S11: -0.0462 S12: -0.0461 S13: 0.1823 REMARK 3 S21: -0.2874 S22: 0.0395 S23: 0.3251 REMARK 3 S31: -0.2922 S32: -0.0184 S33: 0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 134 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5171 18.1193 5.2586 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.1836 REMARK 3 T33: 0.2677 T12: 0.0247 REMARK 3 T13: -0.0907 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.5721 L22: 2.0385 REMARK 3 L33: 1.5608 L12: -0.0411 REMARK 3 L13: -0.3718 L23: -0.2005 REMARK 3 S TENSOR REMARK 3 S11: -0.1286 S12: -0.0148 S13: 0.1458 REMARK 3 S21: -0.1900 S22: 0.0261 S23: 0.5148 REMARK 3 S31: -0.2276 S32: -0.1179 S33: 0.0478 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3177 7.5613 13.8195 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.3046 REMARK 3 T33: 0.1961 T12: 0.0111 REMARK 3 T13: -0.0006 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 0.5803 L22: 1.2563 REMARK 3 L33: 1.4392 L12: -0.2142 REMARK 3 L13: 0.6817 L23: -0.6572 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: 0.6919 S13: 0.4317 REMARK 3 S21: -0.2108 S22: 0.0167 S23: 0.1312 REMARK 3 S31: 0.0882 S32: -0.1652 S33: -0.0425 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8367 4.2116 12.0786 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.3024 REMARK 3 T33: 0.2151 T12: -0.0410 REMARK 3 T13: -0.0491 T23: 0.1099 REMARK 3 L TENSOR REMARK 3 L11: 0.8521 L22: 1.4748 REMARK 3 L33: 2.2576 L12: -0.3509 REMARK 3 L13: -0.5428 L23: 1.1842 REMARK 3 S TENSOR REMARK 3 S11: -0.4301 S12: 0.5379 S13: 0.3926 REMARK 3 S21: -0.1983 S22: 0.3177 S23: 0.4286 REMARK 3 S31: 0.1264 S32: -0.4471 S33: -0.2613 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4503 22.3450 10.5050 REMARK 3 T TENSOR REMARK 3 T11: 0.2219 T22: 0.2395 REMARK 3 T33: 0.2327 T12: 0.0383 REMARK 3 T13: -0.0213 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 9.2600 L22: 5.7177 REMARK 3 L33: 8.2715 L12: 0.4792 REMARK 3 L13: -0.5826 L23: 1.8091 REMARK 3 S TENSOR REMARK 3 S11: -0.0761 S12: 0.4411 S13: 0.3690 REMARK 3 S21: -0.0455 S22: -0.2776 S23: -0.7329 REMARK 3 S31: 0.5206 S32: 0.4815 S33: 0.3369 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8592 31.2875 13.7318 REMARK 3 T TENSOR REMARK 3 T11: 0.2308 T22: 0.2005 REMARK 3 T33: 0.3422 T12: 0.0147 REMARK 3 T13: -0.0766 T23: -0.0700 REMARK 3 L TENSOR REMARK 3 L11: 0.4161 L22: 2.6952 REMARK 3 L33: 1.3133 L12: -0.9970 REMARK 3 L13: -0.4687 L23: 0.7455 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: -0.1406 S13: 0.5031 REMARK 3 S21: -0.1524 S22: -0.0706 S23: -0.2348 REMARK 3 S31: -0.3717 S32: -0.0236 S33: 0.1644 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 36 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7030 14.3361 17.6539 REMARK 3 T TENSOR REMARK 3 T11: 0.1406 T22: 0.1599 REMARK 3 T33: 0.1765 T12: 0.0186 REMARK 3 T13: 0.0251 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.7400 L22: 0.7043 REMARK 3 L33: 2.5930 L12: -0.6074 REMARK 3 L13: 1.6965 L23: -1.2998 REMARK 3 S TENSOR REMARK 3 S11: -0.0438 S12: 0.0537 S13: 0.0033 REMARK 3 S21: -0.0260 S22: 0.0093 S23: -0.0301 REMARK 3 S31: 0.0996 S32: 0.0869 S33: -0.0034 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 55 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.1139 12.3388 23.9880 REMARK 3 T TENSOR REMARK 3 T11: 0.1780 T22: 0.1996 REMARK 3 T33: 0.1656 T12: -0.0346 REMARK 3 T13: -0.0136 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 1.9294 L22: 1.4901 REMARK 3 L33: 2.3286 L12: -0.2023 REMARK 3 L13: 0.0277 L23: -0.8670 REMARK 3 S TENSOR REMARK 3 S11: -0.0336 S12: 0.0249 S13: 0.0855 REMARK 3 S21: -0.0090 S22: 0.1141 S23: -0.0186 REMARK 3 S31: 0.0451 S32: -0.2294 S33: -0.1020 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7247 13.3893 30.2926 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.2005 REMARK 3 T33: 0.1447 T12: -0.0036 REMARK 3 T13: -0.0233 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 2.3946 L22: 1.0024 REMARK 3 L33: 1.4234 L12: -0.8255 REMARK 3 L13: -0.9146 L23: 0.9007 REMARK 3 S TENSOR REMARK 3 S11: 0.0706 S12: 0.1198 S13: 0.0698 REMARK 3 S21: -0.0846 S22: -0.1570 S23: 0.0262 REMARK 3 S31: -0.3302 S32: -0.1691 S33: 0.0849 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0973 20.8347 37.1424 REMARK 3 T TENSOR REMARK 3 T11: 0.3669 T22: 0.1561 REMARK 3 T33: 0.1783 T12: 0.0236 REMARK 3 T13: -0.0614 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.1893 L22: 3.6538 REMARK 3 L33: 0.5542 L12: -0.0958 REMARK 3 L13: -0.4084 L23: 0.7430 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: 0.1146 S13: 0.2327 REMARK 3 S21: -0.2331 S22: 0.0554 S23: 0.0005 REMARK 3 S31: -0.4964 S32: -0.1581 S33: 0.0442 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 114 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4894 14.6379 32.2378 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.1571 REMARK 3 T33: 0.1506 T12: 0.0330 REMARK 3 T13: 0.0165 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.7280 L22: 0.3425 REMARK 3 L33: 1.1934 L12: 0.6037 REMARK 3 L13: -0.4361 L23: 0.2536 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: -0.2210 S13: -0.0392 REMARK 3 S21: 0.0707 S22: 0.0083 S23: 0.1832 REMARK 3 S31: 0.0459 S32: 0.0937 S33: -0.0217 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 134 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4874 19.1373 37.2884 REMARK 3 T TENSOR REMARK 3 T11: 0.2061 T22: 0.2032 REMARK 3 T33: 0.1783 T12: 0.0453 REMARK 3 T13: 0.0592 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.6662 L22: 4.2898 REMARK 3 L33: 1.8846 L12: 0.5089 REMARK 3 L13: -0.2600 L23: -2.0331 REMARK 3 S TENSOR REMARK 3 S11: -0.1399 S12: -0.0309 S13: 0.0176 REMARK 3 S21: 0.3500 S22: 0.0352 S23: -0.1190 REMARK 3 S31: -0.1921 S32: -0.0543 S33: 0.0932 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 147 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8122 24.0738 30.9783 REMARK 3 T TENSOR REMARK 3 T11: 0.2448 T22: 0.1620 REMARK 3 T33: 0.1646 T12: -0.0161 REMARK 3 T13: 0.0083 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 1.0762 L22: 1.6659 REMARK 3 L33: 0.9358 L12: -0.2103 REMARK 3 L13: -0.0296 L23: -0.5243 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: -0.2114 S13: 0.2246 REMARK 3 S21: 0.4163 S22: -0.0223 S23: -0.0067 REMARK 3 S31: -0.4233 S32: 0.1807 S33: -0.0760 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 169 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9219 26.2131 25.6288 REMARK 3 T TENSOR REMARK 3 T11: 0.2300 T22: 0.1746 REMARK 3 T33: 0.2352 T12: -0.0245 REMARK 3 T13: -0.0052 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.7675 L22: 2.1305 REMARK 3 L33: 2.9060 L12: -0.0400 REMARK 3 L13: 0.1399 L23: 0.1084 REMARK 3 S TENSOR REMARK 3 S11: 0.1452 S12: 0.0489 S13: 0.2634 REMARK 3 S21: 0.1685 S22: -0.2025 S23: -0.1984 REMARK 3 S31: -0.7226 S32: 0.4620 S33: 0.0479 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X45 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205050. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JAN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.458 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34302 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 70.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.48300 REMARK 200 R SYM FOR SHELL (I) : 0.48300 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22,5% PEG 4000, 85MM TRIS PH8.5, 170MM REMARK 280 SODIUM ACETATE, 15% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.87400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.60800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.30850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 24.60800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.87400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.30850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 LEU B 103 REMARK 465 GLU B 104 REMARK 465 TYR B 105 REMARK 465 GLY B 106 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 7 CG CD OE1 NE2 REMARK 470 LYS B 107 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 434 O HOH B 437 1.84 REMARK 500 O HOH A 366 O HOH A 368 1.93 REMARK 500 O HOH A 365 O HOH A 383 1.93 REMARK 500 OE2 GLU A 5 O HOH A 201 2.04 REMARK 500 OE2 GLU A 166 O HOH A 364 2.05 REMARK 500 O HOH A 340 O HOH A 368 2.05 REMARK 500 O HOH A 206 O HOH A 212 2.07 REMARK 500 O HOH B 317 O HOH B 344 2.07 REMARK 500 O HOH A 298 O HOH A 368 2.13 REMARK 500 O HOH A 386 O HOH A 388 2.15 REMARK 500 O HOH A 225 O HOH A 270 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 239 O HOH A 244 2454 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 -88.29 -166.46 REMARK 500 GLU A 104 -112.27 53.95 REMARK 500 ALA A 131 -99.71 -110.40 REMARK 500 ALA B 131 -103.87 -108.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AMP B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4X44 RELATED DB: PDB DBREF 4X45 A 1 180 UNP P07741 APT_HUMAN 1 180 DBREF 4X45 B 1 180 UNP P07741 APT_HUMAN 1 180 SEQADV 4X45 GLY A 173 UNP P07741 PHE 173 ENGINEERED MUTATION SEQADV 4X45 GLY B 173 UNP P07741 PHE 173 ENGINEERED MUTATION SEQRES 1 A 180 MET ALA ASP SER GLU LEU GLN LEU VAL GLU GLN ARG ILE SEQRES 2 A 180 ARG SER PHE PRO ASP PHE PRO THR PRO GLY VAL VAL PHE SEQRES 3 A 180 ARG ASP ILE SER PRO VAL LEU LYS ASP PRO ALA SER PHE SEQRES 4 A 180 ARG ALA ALA ILE GLY LEU LEU ALA ARG HIS LEU LYS ALA SEQRES 5 A 180 THR HIS GLY GLY ARG ILE ASP TYR ILE ALA GLY LEU ASP SEQRES 6 A 180 SER ARG GLY PHE LEU PHE GLY PRO SER LEU ALA GLN GLU SEQRES 7 A 180 LEU GLY LEU GLY CYS VAL LEU ILE ARG LYS ARG GLY LYS SEQRES 8 A 180 LEU PRO GLY PRO THR LEU TRP ALA SER TYR SER LEU GLU SEQRES 9 A 180 TYR GLY LYS ALA GLU LEU GLU ILE GLN LYS ASP ALA LEU SEQRES 10 A 180 GLU PRO GLY GLN ARG VAL VAL VAL VAL ASP ASP LEU LEU SEQRES 11 A 180 ALA THR GLY GLY THR MET ASN ALA ALA CYS GLU LEU LEU SEQRES 12 A 180 GLY ARG LEU GLN ALA GLU VAL LEU GLU CYS VAL SER LEU SEQRES 13 A 180 VAL GLU LEU THR SER LEU LYS GLY ARG GLU LYS LEU ALA SEQRES 14 A 180 PRO VAL PRO GLY PHE SER LEU LEU GLN TYR GLU SEQRES 1 B 180 MET ALA ASP SER GLU LEU GLN LEU VAL GLU GLN ARG ILE SEQRES 2 B 180 ARG SER PHE PRO ASP PHE PRO THR PRO GLY VAL VAL PHE SEQRES 3 B 180 ARG ASP ILE SER PRO VAL LEU LYS ASP PRO ALA SER PHE SEQRES 4 B 180 ARG ALA ALA ILE GLY LEU LEU ALA ARG HIS LEU LYS ALA SEQRES 5 B 180 THR HIS GLY GLY ARG ILE ASP TYR ILE ALA GLY LEU ASP SEQRES 6 B 180 SER ARG GLY PHE LEU PHE GLY PRO SER LEU ALA GLN GLU SEQRES 7 B 180 LEU GLY LEU GLY CYS VAL LEU ILE ARG LYS ARG GLY LYS SEQRES 8 B 180 LEU PRO GLY PRO THR LEU TRP ALA SER TYR SER LEU GLU SEQRES 9 B 180 TYR GLY LYS ALA GLU LEU GLU ILE GLN LYS ASP ALA LEU SEQRES 10 B 180 GLU PRO GLY GLN ARG VAL VAL VAL VAL ASP ASP LEU LEU SEQRES 11 B 180 ALA THR GLY GLY THR MET ASN ALA ALA CYS GLU LEU LEU SEQRES 12 B 180 GLY ARG LEU GLN ALA GLU VAL LEU GLU CYS VAL SER LEU SEQRES 13 B 180 VAL GLU LEU THR SER LEU LYS GLY ARG GLU LYS LEU ALA SEQRES 14 B 180 PRO VAL PRO GLY PHE SER LEU LEU GLN TYR GLU HET AMP B 201 23 HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 4 HOH *373(H2 O) HELIX 1 AA1 SER A 4 GLN A 11 1 8 HELIX 2 AA2 ILE A 29 ASP A 35 1 7 HELIX 3 AA3 ASP A 35 GLY A 55 1 21 HELIX 4 AA4 SER A 66 LEU A 70 5 5 HELIX 5 AA5 PHE A 71 GLY A 80 1 10 HELIX 6 AA6 GLY A 133 LEU A 146 1 14 HELIX 7 AA7 LYS A 163 ALA A 169 1 7 HELIX 8 AA8 ASP B 3 GLN B 11 1 9 HELIX 9 AA9 ILE B 29 ASP B 35 1 7 HELIX 10 AB1 ASP B 35 GLY B 55 1 21 HELIX 11 AB2 SER B 66 LEU B 70 5 5 HELIX 12 AB3 PHE B 71 GLY B 80 1 10 HELIX 13 AB4 GLY B 133 ARG B 145 1 13 HELIX 14 AB5 LYS B 163 ALA B 169 1 7 SHEET 1 AA1 2 ARG A 14 PRO A 17 0 SHEET 2 AA1 2 VAL A 25 ASP A 28 -1 O ASP A 28 N ARG A 14 SHEET 1 AA2 7 THR A 96 LEU A 103 0 SHEET 2 AA2 7 GLY A 106 GLN A 113 -1 O GLY A 106 N LEU A 103 SHEET 3 AA2 7 GLY A 82 LYS A 88 -1 N ARG A 87 O GLU A 111 SHEET 4 AA2 7 TYR A 60 LEU A 64 1 N ILE A 61 O VAL A 84 SHEET 5 AA2 7 ARG A 122 VAL A 126 1 O VAL A 124 N ALA A 62 SHEET 6 AA2 7 GLU A 149 LEU A 159 1 O VAL A 154 N VAL A 125 SHEET 7 AA2 7 LEU A 129 LEU A 130 1 N LEU A 130 O VAL A 157 SHEET 1 AA3 7 THR A 96 LEU A 103 0 SHEET 2 AA3 7 GLY A 106 GLN A 113 -1 O GLY A 106 N LEU A 103 SHEET 3 AA3 7 GLY A 82 LYS A 88 -1 N ARG A 87 O GLU A 111 SHEET 4 AA3 7 TYR A 60 LEU A 64 1 N ILE A 61 O VAL A 84 SHEET 5 AA3 7 ARG A 122 VAL A 126 1 O VAL A 124 N ALA A 62 SHEET 6 AA3 7 GLU A 149 LEU A 159 1 O VAL A 154 N VAL A 125 SHEET 7 AA3 7 GLY A 173 TYR A 179 1 O PHE A 174 N CYS A 153 SHEET 1 AA4 2 ARG B 14 PHE B 16 0 SHEET 2 AA4 2 PHE B 26 ASP B 28 -1 O ASP B 28 N ARG B 14 SHEET 1 AA5 7 THR B 96 TYR B 101 0 SHEET 2 AA5 7 ALA B 108 GLN B 113 -1 O ALA B 108 N TYR B 101 SHEET 3 AA5 7 GLY B 82 LYS B 88 -1 N ARG B 87 O GLU B 111 SHEET 4 AA5 7 TYR B 60 LEU B 64 1 N ILE B 61 O VAL B 84 SHEET 5 AA5 7 ARG B 122 VAL B 126 1 O VAL B 124 N ALA B 62 SHEET 6 AA5 7 GLU B 149 LEU B 159 1 O VAL B 154 N VAL B 125 SHEET 7 AA5 7 LEU B 129 LEU B 130 1 N LEU B 130 O VAL B 157 SHEET 1 AA6 7 THR B 96 TYR B 101 0 SHEET 2 AA6 7 ALA B 108 GLN B 113 -1 O ALA B 108 N TYR B 101 SHEET 3 AA6 7 GLY B 82 LYS B 88 -1 N ARG B 87 O GLU B 111 SHEET 4 AA6 7 TYR B 60 LEU B 64 1 N ILE B 61 O VAL B 84 SHEET 5 AA6 7 ARG B 122 VAL B 126 1 O VAL B 124 N ALA B 62 SHEET 6 AA6 7 GLU B 149 LEU B 159 1 O VAL B 154 N VAL B 125 SHEET 7 AA6 7 GLY B 173 TYR B 179 1 O PHE B 174 N CYS B 153 CISPEP 1 PHE A 19 PRO A 20 0 1.68 CISPEP 2 ASP A 65 SER A 66 0 0.19 CISPEP 3 ALA A 169 PRO A 170 0 6.52 CISPEP 4 PHE B 19 PRO B 20 0 4.56 CISPEP 5 ASP B 65 SER B 66 0 2.00 CISPEP 6 ALA B 169 PRO B 170 0 8.57 SITE 1 AC1 19 VAL B 25 PHE B 26 ARG B 27 ARG B 67 SITE 2 AC1 19 ASP B 127 ASP B 128 LEU B 129 ALA B 131 SITE 3 AC1 19 THR B 132 GLY B 133 GLY B 134 THR B 135 SITE 4 AC1 19 LEU B 159 HOH B 363 HOH B 388 HOH B 424 SITE 5 AC1 19 HOH B 442 HOH B 446 HOH B 451 CRYST1 47.748 140.617 49.216 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020319 0.00000