HEADER IMMUNE SYSTEM 04-DEC-14 4X4Y OBSLTE 12-JUN-19 4X4Y 6DN0 TITLE RETROFITTING ANTIBODIES WITH STABILIZING MUTATIONS. HERCEPTIN SCFV TITLE 2 MUTANT K30D/S52D. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN VARIABLE HEAVY CHAIN OF HERCEPTIN; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HUMAN VARIABLE LIGHT CHAIN OF HERCEPTIN; COMPND 8 CHAIN: B, D; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS ANTIBODY STABILIZATION MUTATIONS, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.B.LANGLEY,B.ROOME,D.CHRIST REVDAT 2 12-JUN-19 4X4Y 1 OBSLTE REMARK REVDAT 1 23-DEC-15 4X4Y 0 JRNL AUTH D.B.LANGLEY,B.ROOME,D.CHRIST JRNL TITL RETROFITTING ANTIBODIES WITH STABILIZING MUTATIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.38 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1358 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3082 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.03000 REMARK 3 B22 (A**2) : 1.03000 REMARK 3 B33 (A**2) : -3.35000 REMARK 3 B12 (A**2) : 0.52000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.363 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.268 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.220 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.360 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3160 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2686 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4335 ; 1.499 ; 1.927 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6096 ; 0.788 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 430 ; 6.950 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;35.509 ;22.569 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 365 ;14.417 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;19.101 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 498 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3716 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 755 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1738 ; 1.757 ; 3.375 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1737 ; 1.757 ; 3.375 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2162 ; 2.879 ; 5.059 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2163 ; 2.878 ; 5.059 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1422 ; 1.931 ; 3.358 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1423 ; 1.930 ; 3.358 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2173 ; 3.002 ; 5.006 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3330 ; 4.660 ;26.836 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3331 ; 4.659 ;26.838 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 30.0867 17.3208 -22.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.1718 T22: 0.0176 REMARK 3 T33: 0.0074 T12: 0.0399 REMARK 3 T13: 0.0275 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.8892 L22: 2.8702 REMARK 3 L33: 3.3438 L12: 0.1590 REMARK 3 L13: -0.3774 L23: 0.3381 REMARK 3 S TENSOR REMARK 3 S11: 0.1195 S12: -0.0189 S13: -0.0110 REMARK 3 S21: -0.2494 S22: -0.0309 S23: -0.1074 REMARK 3 S31: -0.4508 S32: -0.1376 S33: -0.0886 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 106 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6522 8.2149 -38.9101 REMARK 3 T TENSOR REMARK 3 T11: 0.1833 T22: 0.0222 REMARK 3 T33: 0.0574 T12: 0.0365 REMARK 3 T13: 0.0811 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 3.2844 L22: 2.1988 REMARK 3 L33: 4.4576 L12: -0.0047 REMARK 3 L13: -0.7978 L23: 0.7188 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: 0.1642 S13: -0.1949 REMARK 3 S21: 0.0037 S22: 0.1172 S23: -0.0907 REMARK 3 S31: -0.0375 S32: 0.0457 S33: -0.1378 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 119 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8977 14.9043 1.2892 REMARK 3 T TENSOR REMARK 3 T11: 0.0491 T22: 0.0986 REMARK 3 T33: 0.0211 T12: 0.0388 REMARK 3 T13: -0.0244 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 2.7957 L22: 3.3840 REMARK 3 L33: 3.9294 L12: 1.4114 REMARK 3 L13: 0.7105 L23: 0.7457 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: -0.2799 S13: -0.0016 REMARK 3 S21: -0.1198 S22: -0.1912 S23: 0.0267 REMARK 3 S31: -0.0320 S32: -0.2265 S33: 0.1530 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 105 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5447 25.2463 19.5668 REMARK 3 T TENSOR REMARK 3 T11: 0.0768 T22: 0.2519 REMARK 3 T33: 0.0608 T12: 0.0507 REMARK 3 T13: -0.0024 T23: -0.1086 REMARK 3 L TENSOR REMARK 3 L11: 1.6436 L22: 2.1995 REMARK 3 L33: 4.3266 L12: -0.2772 REMARK 3 L13: 0.7443 L23: 0.2487 REMARK 3 S TENSOR REMARK 3 S11: -0.0804 S12: -0.0756 S13: 0.0950 REMARK 3 S21: 0.2942 S22: 0.0542 S23: 0.0819 REMARK 3 S31: -0.0883 S32: -0.2470 S33: 0.0262 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4X4Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205092. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 - 5.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19967 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 34.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.90 REMARK 200 R MERGE FOR SHELL (I) : 0.85900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: SMALL HEXAGONAL RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GREW SLOWLY OVER A 1 MONTH REMARK 280 PERIOD, PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.16367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.32733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.32733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 38.16367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A -3 REMARK 465 ALA A -2 REMARK 465 SER A -1 REMARK 465 THR A 0 REMARK 465 SER A 120 REMARK 465 GLY A 121 REMARK 465 GLY A 122 REMARK 465 GLY A 123 REMARK 465 GLY A 124 REMARK 465 SER A 125 REMARK 465 GLY A 126 REMARK 465 GLY A 127 REMARK 465 GLY A 128 REMARK 465 GLY A 129 REMARK 465 SER A 130 REMARK 465 GLY A 131 REMARK 465 GLY A 132 REMARK 465 GLY A 133 REMARK 465 GLY A 134 REMARK 465 SER A 135 REMARK 465 THR A 136 REMARK 465 LYS B 107 REMARK 465 PHE C -3 REMARK 465 ALA C -2 REMARK 465 SER C -1 REMARK 465 THR C 0 REMARK 465 GLU C 1 REMARK 465 GLY C 100 REMARK 465 GLY C 101 REMARK 465 ASP C 102 REMARK 465 GLY C 103 REMARK 465 PHE C 104 REMARK 465 SER C 120 REMARK 465 GLY C 121 REMARK 465 GLY C 122 REMARK 465 GLY C 123 REMARK 465 GLY C 124 REMARK 465 SER C 125 REMARK 465 GLY C 126 REMARK 465 GLY C 127 REMARK 465 GLY C 128 REMARK 465 GLY C 129 REMARK 465 SER C 130 REMARK 465 GLY C 131 REMARK 465 GLY C 132 REMARK 465 GLY C 133 REMARK 465 GLY C 134 REMARK 465 SER C 135 REMARK 465 THR C 136 REMARK 465 SER D 56 REMARK 465 GLY D 57 REMARK 465 VAL D 58 REMARK 465 PRO D 59 REMARK 465 SER D 60 REMARK 465 ARG D 61 REMARK 465 PHE D 62 REMARK 465 ILE D 106 REMARK 465 LYS D 107 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 1 CG CD OE1 OE2 REMARK 470 GLN A 3 CG CD OE1 NE2 REMARK 470 LEU A 11 CG CD1 CD2 REMARK 470 VAL A 12 CG1 CG2 REMARK 470 GLN A 13 CG CD OE1 NE2 REMARK 470 LEU A 18 CG CD1 CD2 REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 SER A 75 OG REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 GLU A 89 CG CD OE1 OE2 REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 SER A 119 OG REMARK 470 ASP B 1 CG OD1 OD2 REMARK 470 GLN B 3 CG CD OE1 NE2 REMARK 470 SER B 12 OG REMARK 470 ARG B 18 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 27 CG CD OE1 NE2 REMARK 470 ASN B 30 CG OD1 ND2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 SER B 50 OG REMARK 470 ARG B 66 CG CD NE CZ NH1 NH2 REMARK 470 SER B 67 OG REMARK 470 THR B 69 OG1 CG2 REMARK 470 ASP B 70 CG OD1 OD2 REMARK 470 LEU B 78 CG CD1 CD2 REMARK 470 GLN B 79 CG CD OE1 NE2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 PHE B 83 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 100 CG CD OE1 NE2 REMARK 470 LYS B 103 CG CD CE NZ REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 ILE B 106 CG1 CG2 CD1 REMARK 470 VAL C 2 CG1 CG2 REMARK 470 GLN C 13 CG CD OE1 NE2 REMARK 470 ASP C 30 CG OD1 OD2 REMARK 470 ASP C 31 CG OD1 OD2 REMARK 470 LYS C 43 CG CD CE NZ REMARK 470 THR C 54 OG1 CG2 REMARK 470 ASN C 55 CG OD1 ND2 REMARK 470 LYS C 65 CG CD CE NZ REMARK 470 LYS C 76 CG CD CE NZ REMARK 470 GLU C 89 CG CD OE1 OE2 REMARK 470 ARG C 98 CG CD NE CZ NH1 NH2 REMARK 470 TYR C 105 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP C 108 CG OD1 OD2 REMARK 470 GLN C 112 CG CD OE1 NE2 REMARK 470 SER C 119 OG REMARK 470 ASP D 1 CG OD1 OD2 REMARK 470 SER D 9 OG REMARK 470 SER D 14 OG REMARK 470 VAL D 15 CG1 CG2 REMARK 470 ASP D 17 CG OD1 OD2 REMARK 470 ARG D 18 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 19 CG1 CG2 REMARK 470 THR D 20 OG1 CG2 REMARK 470 ARG D 24 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 27 CG CD OE1 NE2 REMARK 470 ASP D 28 CG OD1 OD2 REMARK 470 LYS D 39 CG CD CE NZ REMARK 470 LYS D 42 CG CD CE NZ REMARK 470 LYS D 45 CG CD CE NZ REMARK 470 ILE D 48 CG1 CG2 CD1 REMARK 470 TYR D 49 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP D 52 CG OD1 OD2 REMARK 470 LEU D 54 CG CD1 CD2 REMARK 470 TYR D 55 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER D 63 OG REMARK 470 SER D 65 OG REMARK 470 SER D 67 OG REMARK 470 THR D 69 OG1 CG2 REMARK 470 ASP D 70 CG OD1 OD2 REMARK 470 ILE D 75 CG1 CG2 CD1 REMARK 470 SER D 76 OG REMARK 470 SER D 77 OG REMARK 470 LEU D 78 CG CD1 CD2 REMARK 470 GLN D 79 CG CD OE1 NE2 REMARK 470 GLU D 81 CG CD OE1 OE2 REMARK 470 PHE D 83 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN D 100 CG CD OE1 NE2 REMARK 470 LYS D 103 CG CD CE NZ REMARK 470 GLU D 105 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 92 168.25 177.04 REMARK 500 ASP A 102 52.09 37.05 REMARK 500 ALA A 106 -141.09 36.02 REMARK 500 ASN B 30 71.38 16.29 REMARK 500 ALA B 51 -55.60 69.01 REMARK 500 ARG B 66 -157.82 -106.12 REMARK 500 SER B 67 -6.01 140.52 REMARK 500 THR B 69 126.75 -33.78 REMARK 500 SER B 77 76.93 -164.90 REMARK 500 LYS C 43 -1.47 -141.05 REMARK 500 THR C 54 -77.83 -57.94 REMARK 500 ASN D 30 -128.27 48.06 REMARK 500 SER D 50 51.16 70.32 REMARK 500 ALA D 51 -51.43 66.55 REMARK 500 THR D 69 52.31 -92.09 REMARK 500 HIS D 91 51.42 -110.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4X4X RELATED DB: PDB REMARK 900 RELATED ID: 4X4Z RELATED DB: PDB DBREF 4X4Y A -3 136 PDB 4X4Y 4X4Y -3 136 DBREF 4X4Y B 1 107 PDB 4X4Y 4X4Y 1 107 DBREF 4X4Y C -3 136 PDB 4X4Y 4X4Y -3 136 DBREF 4X4Y D 1 107 PDB 4X4Y 4X4Y 1 107 SEQRES 1 A 140 PHE ALA SER THR GLU VAL GLN LEU VAL GLU SER GLY GLY SEQRES 2 A 140 GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS SEQRES 3 A 140 ALA ALA SER GLY PHE ASN ILE ASP ASP THR TYR ILE HIS SEQRES 4 A 140 TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SEQRES 5 A 140 ALA ARG ILE TYR PRO THR ASN GLY TYR THR ARG TYR ALA SEQRES 6 A 140 ASP SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SEQRES 7 A 140 SER LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG SEQRES 8 A 140 ALA GLU ASP THR ALA VAL TYR TYR CYS SER ARG TRP GLY SEQRES 9 A 140 GLY ASP GLY PHE TYR ALA MET ASP VAL TRP GLY GLN GLY SEQRES 10 A 140 THR LEU VAL THR VAL SER SER GLY GLY GLY GLY SER GLY SEQRES 11 A 140 GLY GLY GLY SER GLY GLY GLY GLY SER THR SEQRES 1 B 107 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 107 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 B 107 GLN ASP VAL ASN THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 B 107 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA ASP SEQRES 5 B 107 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 B 107 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 B 107 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 B 107 TYR THR THR PRO PRO THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 B 107 GLU ILE LYS SEQRES 1 C 140 PHE ALA SER THR GLU VAL GLN LEU VAL GLU SER GLY GLY SEQRES 2 C 140 GLY LEU VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS SEQRES 3 C 140 ALA ALA SER GLY PHE ASN ILE ASP ASP THR TYR ILE HIS SEQRES 4 C 140 TRP VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SEQRES 5 C 140 ALA ARG ILE TYR PRO THR ASN GLY TYR THR ARG TYR ALA SEQRES 6 C 140 ASP SER VAL LYS GLY ARG PHE THR ILE SER ALA ASP THR SEQRES 7 C 140 SER LYS ASN THR ALA TYR LEU GLN MET ASN SER LEU ARG SEQRES 8 C 140 ALA GLU ASP THR ALA VAL TYR TYR CYS SER ARG TRP GLY SEQRES 9 C 140 GLY ASP GLY PHE TYR ALA MET ASP VAL TRP GLY GLN GLY SEQRES 10 C 140 THR LEU VAL THR VAL SER SER GLY GLY GLY GLY SER GLY SEQRES 11 C 140 GLY GLY GLY SER GLY GLY GLY GLY SER THR SEQRES 1 D 107 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 107 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 D 107 GLN ASP VAL ASN THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 D 107 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA ASP SEQRES 5 D 107 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 D 107 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 D 107 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 D 107 TYR THR THR PRO PRO THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 D 107 GLU ILE LYS HELIX 1 AA1 ASN A 28 THR A 32 5 5 HELIX 2 AA2 ARG A 87 THR A 91 5 5 HELIX 3 AA3 GLY A 101 PHE A 104 5 4 HELIX 4 AA4 GLN B 79 PHE B 83 5 5 HELIX 5 AA5 ASN C 28 THR C 32 5 5 HELIX 6 AA6 ARG C 87 THR C 91 5 5 HELIX 7 AA7 GLN D 79 PHE D 83 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 25 N GLN A 3 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N SER A 71 O TYR A 80 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 THR A 114 VAL A 118 1 O THR A 117 N VAL A 12 SHEET 3 AA2 6 ALA A 92 TRP A 99 -1 N ALA A 92 O VAL A 116 SHEET 4 AA2 6 ILE A 34 GLN A 39 -1 N VAL A 37 O TYR A 95 SHEET 5 AA2 6 GLU A 46 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 THR A 58 TYR A 60 -1 O ARG A 59 N ARG A 50 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 THR A 114 VAL A 118 1 O THR A 117 N VAL A 12 SHEET 3 AA3 4 ALA A 92 TRP A 99 -1 N ALA A 92 O VAL A 116 SHEET 4 AA3 4 MET A 107 TRP A 110 -1 O VAL A 109 N ARG A 98 SHEET 1 AA4 4 MET B 4 SER B 7 0 SHEET 2 AA4 4 VAL B 19 ALA B 25 -1 O THR B 22 N SER B 7 SHEET 3 AA4 4 PHE B 71 ILE B 75 -1 O PHE B 71 N CYS B 23 SHEET 4 AA4 4 PHE B 62 SER B 65 -1 N SER B 63 O THR B 74 SHEET 1 AA5 6 SER B 10 SER B 12 0 SHEET 2 AA5 6 THR B 102 GLU B 105 1 O GLU B 105 N LEU B 11 SHEET 3 AA5 6 ALA B 84 GLN B 90 -1 N ALA B 84 O VAL B 104 SHEET 4 AA5 6 VAL B 33 GLN B 38 -1 N GLN B 38 O THR B 85 SHEET 5 AA5 6 LYS B 45 TYR B 49 -1 O LEU B 47 N TRP B 35 SHEET 6 AA5 6 PHE B 53 LEU B 54 -1 O PHE B 53 N TYR B 49 SHEET 1 AA6 4 SER B 10 SER B 12 0 SHEET 2 AA6 4 THR B 102 GLU B 105 1 O GLU B 105 N LEU B 11 SHEET 3 AA6 4 ALA B 84 GLN B 90 -1 N ALA B 84 O VAL B 104 SHEET 4 AA6 4 THR B 97 PHE B 98 -1 O THR B 97 N GLN B 90 SHEET 1 AA7 4 GLN C 3 GLY C 8 0 SHEET 2 AA7 4 LEU C 18 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AA7 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AA7 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AA8 6 GLY C 10 VAL C 12 0 SHEET 2 AA8 6 THR C 114 VAL C 118 1 O LEU C 115 N GLY C 10 SHEET 3 AA8 6 ALA C 92 ARG C 98 -1 N ALA C 92 O VAL C 116 SHEET 4 AA8 6 ILE C 34 ALA C 40 -1 N VAL C 37 O TYR C 95 SHEET 5 AA8 6 GLY C 44 TYR C 52 -1 O GLU C 46 N ARG C 38 SHEET 6 AA8 6 TYR C 57 TYR C 60 -1 O TYR C 57 N TYR C 52 SHEET 1 AA9 4 MET D 4 SER D 7 0 SHEET 2 AA9 4 VAL D 19 ALA D 25 -1 O ARG D 24 N THR D 5 SHEET 3 AA9 4 PHE D 71 ILE D 75 -1 O LEU D 73 N ILE D 21 SHEET 4 AA9 4 GLY D 64 ARG D 66 -1 N SER D 65 O THR D 72 SHEET 1 AB1 6 SER D 10 SER D 12 0 SHEET 2 AB1 6 THR D 102 GLU D 105 1 O LYS D 103 N LEU D 11 SHEET 3 AB1 6 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 4 AB1 6 VAL D 33 GLN D 38 -1 N ALA D 34 O GLN D 89 SHEET 5 AB1 6 PRO D 44 TYR D 49 -1 O LEU D 47 N TRP D 35 SHEET 6 AB1 6 PHE D 53 LEU D 54 -1 O PHE D 53 N TYR D 49 SHEET 1 AB2 4 SER D 10 SER D 12 0 SHEET 2 AB2 4 THR D 102 GLU D 105 1 O LYS D 103 N LEU D 11 SHEET 3 AB2 4 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 4 AB2 4 THR D 97 PHE D 98 -1 O THR D 97 N GLN D 90 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.03 SSBOND 2 CYS B 23 CYS B 88 1555 1555 2.10 SSBOND 3 CYS C 22 CYS C 96 1555 1555 2.06 SSBOND 4 CYS D 23 CYS D 88 1555 1555 2.10 CISPEP 1 SER B 7 PRO B 8 0 -4.33 CISPEP 2 GLY B 68 THR B 69 0 23.08 CISPEP 3 THR B 69 ASP B 70 0 21.96 CISPEP 4 THR B 94 PRO B 95 0 -1.45 CISPEP 5 SER D 7 PRO D 8 0 2.01 CISPEP 6 THR D 94 PRO D 95 0 -4.30 CRYST1 91.500 91.500 114.491 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010929 0.006310 0.000000 0.00000 SCALE2 0.000000 0.012620 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008734 0.00000