HEADER SUGAR BINDING PROTEIN 05-DEC-14 4X5R TITLE CRYSTAL STRUCTURE OF FIMH IN COMPLEX WITH A SQUARYL-PHENYL ALPHA-D- TITLE 2 MANNOPYRANOSIDE DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN FIMH; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 22-180; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: FIMH, B4320, JW4283; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PTRC99 KEYWDS SUGAR BINDING PROTEIN, BACTERIAL ADHESIN, PILUS, UPEC, ANTAGONIST KEYWDS 2 COMPLEX, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR R.C.PRESTON,R.P.JAKOB,B.FIEGE,P.ZIHLMANN,S.RABBANI,O.SCHWARDT, AUTHOR 2 X.JIANG,B.ERNST,T.MAIER REVDAT 3 10-JAN-24 4X5R 1 REMARK REVDAT 2 27-MAY-15 4X5R 1 JRNL REVDAT 1 20-MAY-15 4X5R 0 JRNL AUTH B.FIEGE,S.RABBANI,R.C.PRESTON,R.P.JAKOB,P.ZIHLMANN, JRNL AUTH 2 O.SCHWARDT,X.JIANG,T.MAIER,B.ERNST JRNL TITL THE TYROSINE GATE OF THE BACTERIAL LECTIN FIMH: A JRNL TITL 2 CONFORMATIONAL ANALYSIS BY NMR SPECTROSCOPY AND X-RAY JRNL TITL 3 CRYSTALLOGRAPHY. JRNL REF CHEMBIOCHEM V. 16 1235 2015 JRNL REFN ESSN 1439-7633 JRNL PMID 25940742 JRNL DOI 10.1002/CBIC.201402714 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1779) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 57594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2880 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.0503 - 4.5491 1.00 3017 159 0.1482 0.1733 REMARK 3 2 4.5491 - 3.6119 0.93 2664 140 0.1434 0.1558 REMARK 3 3 3.6119 - 3.1556 1.00 2833 149 0.1409 0.1723 REMARK 3 4 3.1556 - 2.8672 1.00 2836 149 0.1420 0.1711 REMARK 3 5 2.8672 - 2.6618 1.00 2801 147 0.1518 0.1971 REMARK 3 6 2.6618 - 2.5049 1.00 2796 148 0.1514 0.1939 REMARK 3 7 2.5049 - 2.3795 1.00 2793 147 0.1489 0.1839 REMARK 3 8 2.3795 - 2.2759 0.96 2694 141 0.1659 0.2193 REMARK 3 9 2.2759 - 2.1883 0.55 1520 80 0.2191 0.2804 REMARK 3 10 2.1883 - 2.1128 1.00 2772 146 0.1595 0.2039 REMARK 3 11 2.1128 - 2.0467 1.00 2755 145 0.1595 0.2314 REMARK 3 12 2.0467 - 1.9882 1.00 2775 146 0.1701 0.2306 REMARK 3 13 1.9882 - 1.9359 0.93 2572 136 0.2180 0.2594 REMARK 3 14 1.9359 - 1.8887 0.22 606 32 0.4337 0.5223 REMARK 3 15 1.8887 - 1.8457 1.00 2759 145 0.1852 0.2319 REMARK 3 16 1.8457 - 1.8065 1.00 2776 146 0.1807 0.2344 REMARK 3 17 1.8065 - 1.7703 1.00 2757 145 0.1884 0.2522 REMARK 3 18 1.7703 - 1.7369 1.00 2753 145 0.1934 0.2531 REMARK 3 19 1.7369 - 1.7059 1.00 2762 145 0.2111 0.2538 REMARK 3 20 1.7059 - 1.6770 1.00 2730 144 0.2424 0.2780 REMARK 3 21 1.6770 - 1.6499 0.99 2743 145 0.2725 0.3511 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3876 REMARK 3 ANGLE : 1.318 5351 REMARK 3 CHIRALITY : 0.053 619 REMARK 3 PLANARITY : 0.006 724 REMARK 3 DIHEDRAL : 11.231 1385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205099. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57603 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 42.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.97100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1UWF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 0.1 M HEPES PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.64500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.93000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.93000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.64500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 159 REMARK 465 LEU A 160 REMARK 465 GLY B 159 REMARK 465 LEU B 160 REMARK 465 GLY C 159 REMARK 465 LEU C 160 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD21 ASN B 23 O HOH B 664 1.07 REMARK 500 HH TYR C 21 O HOH C 401 1.37 REMARK 500 HH12 ARG A 98 O HOH A 688 1.56 REMARK 500 H GLY C 31 O HOH C 610 1.58 REMARK 500 HE21 GLN A 32 O HOH A 404 1.58 REMARK 500 HH TYR C 55 O HOH C 585 1.60 REMARK 500 ND2 ASN B 23 O HOH B 664 1.81 REMARK 500 O HOH C 443 O HOH C 473 1.82 REMARK 500 O HOH B 699 O HOH B 717 1.84 REMARK 500 O HOH A 668 O HOH A 669 1.85 REMARK 500 O HOH B 684 O HOH B 720 1.85 REMARK 500 O HOH C 485 O HOH C 487 1.90 REMARK 500 O HOH A 587 O HOH A 695 1.92 REMARK 500 O HOH B 578 O HOH B 685 1.92 REMARK 500 O HOH B 413 O HOH B 448 1.94 REMARK 500 O HOH B 423 O HOH B 706 1.96 REMARK 500 O HOH C 566 O HOH C 666 1.97 REMARK 500 O HOH B 695 O HOH B 705 1.98 REMARK 500 O HOH B 595 O HOH B 680 1.98 REMARK 500 O HOH B 701 O HOH B 705 1.99 REMARK 500 O HOH A 647 O HOH A 672 2.00 REMARK 500 O HOH A 454 O HOH A 455 2.03 REMARK 500 O HOH A 648 O HOH A 656 2.07 REMARK 500 O HOH A 587 O HOH A 636 2.08 REMARK 500 OD1 ASP A 100 O HOH A 650 2.10 REMARK 500 O HOH A 596 O HOH A 656 2.10 REMARK 500 O HOH B 617 O HOH B 679 2.13 REMARK 500 O HOH A 572 O HOH A 645 2.13 REMARK 500 OH TYR C 21 O HOH C 401 2.14 REMARK 500 O HOH B 605 O HOH B 609 2.14 REMARK 500 O HOH C 520 O HOH C 636 2.15 REMARK 500 O HOH A 665 O HOH A 708 2.15 REMARK 500 O HOH A 589 O HOH A 672 2.17 REMARK 500 O HOH C 488 O HOH C 493 2.17 REMARK 500 O HOH C 421 O HOH C 462 2.17 REMARK 500 OE2 GLU A 89 O HOH A 401 2.17 REMARK 500 NE ARG C 92 O HOH C 586 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 469 O HOH C 427 3554 1.92 REMARK 500 O HOH B 463 O HOH C 420 1655 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 48 54.52 -155.59 REMARK 500 VAL A 112 -65.02 -94.60 REMARK 500 TYR B 48 55.10 -152.86 REMARK 500 ASN B 96 30.43 -141.65 REMARK 500 TYR B 137 -57.03 -128.24 REMARK 500 TYR C 48 57.88 -151.51 REMARK 500 ASN C 96 28.81 -140.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 644 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 697 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 713 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH B 647 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH B 662 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 677 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH B 683 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B 714 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH C 647 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH C 653 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH C 665 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH C 669 DISTANCE = 6.54 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3XO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3XO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3XO C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4CSS RELATED DB: PDB REMARK 900 4CSS CONTAINS THE SAME PROTEIN WITH A DIFFERENT ANTAGONIST. REMARK 900 RELATED ID: 4CST RELATED DB: PDB REMARK 900 4CST CONTAINS THE SAME PROTEIN WITH A DIFFERENT ANTAGONIST. DBREF 4X5R A 1 159 UNP P08191 FIMH_ECOLI 22 180 DBREF 4X5R B 1 159 UNP P08191 FIMH_ECOLI 22 180 DBREF 4X5R C 1 159 UNP P08191 FIMH_ECOLI 22 180 SEQADV 4X5R LEU A 160 UNP P08191 EXPRESSION TAG SEQADV 4X5R LEU B 160 UNP P08191 EXPRESSION TAG SEQADV 4X5R LEU C 160 UNP P08191 EXPRESSION TAG SEQRES 1 A 160 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 A 160 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 A 160 VAL VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 A 160 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 A 160 THR ASP TYR VAL THR LEU GLN ARG GLY SER ALA TYR GLY SEQRES 6 A 160 GLY VAL LEU SER ASN PHE SER GLY THR VAL LYS TYR SER SEQRES 7 A 160 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 A 160 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 A 160 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 A 160 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 A 160 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 A 160 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 A 160 PRO THR GLY LEU SEQRES 1 B 160 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 B 160 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 B 160 VAL VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 B 160 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 B 160 THR ASP TYR VAL THR LEU GLN ARG GLY SER ALA TYR GLY SEQRES 6 B 160 GLY VAL LEU SER ASN PHE SER GLY THR VAL LYS TYR SER SEQRES 7 B 160 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 B 160 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 B 160 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 B 160 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 B 160 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 B 160 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 B 160 PRO THR GLY LEU SEQRES 1 C 160 PHE ALA CYS LYS THR ALA ASN GLY THR ALA ILE PRO ILE SEQRES 2 C 160 GLY GLY GLY SER ALA ASN VAL TYR VAL ASN LEU ALA PRO SEQRES 3 C 160 VAL VAL ASN VAL GLY GLN ASN LEU VAL VAL ASP LEU SER SEQRES 4 C 160 THR GLN ILE PHE CYS HIS ASN ASP TYR PRO GLU THR ILE SEQRES 5 C 160 THR ASP TYR VAL THR LEU GLN ARG GLY SER ALA TYR GLY SEQRES 6 C 160 GLY VAL LEU SER ASN PHE SER GLY THR VAL LYS TYR SER SEQRES 7 C 160 GLY SER SER TYR PRO PHE PRO THR THR SER GLU THR PRO SEQRES 8 C 160 ARG VAL VAL TYR ASN SER ARG THR ASP LYS PRO TRP PRO SEQRES 9 C 160 VAL ALA LEU TYR LEU THR PRO VAL SER SER ALA GLY GLY SEQRES 10 C 160 VAL ALA ILE LYS ALA GLY SER LEU ILE ALA VAL LEU ILE SEQRES 11 C 160 LEU ARG GLN THR ASN ASN TYR ASN SER ASP ASP PHE GLN SEQRES 12 C 160 PHE VAL TRP ASN ILE TYR ALA ASN ASN ASP VAL VAL VAL SEQRES 13 C 160 PRO THR GLY LEU HET 3XO A 301 59 HET SO4 A 302 5 HET 3XO B 301 59 HET 3XO C 301 59 HETNAM 3XO 2-CHLORO-4-{[2-(4-METHYLPIPERAZIN-1-YL)-3,4- HETNAM 2 3XO DIOXOCYCLOBUT-1-EN-1-YL]AMINO}PHENYL ALPHA-D- HETNAM 3 3XO MANNOPYRANOSIDE HETNAM SO4 SULFATE ION FORMUL 4 3XO 3(C21 H26 CL N3 O8) FORMUL 5 SO4 O4 S 2- FORMUL 8 HOH *915(H2 O) HELIX 1 AA1 TYR A 64 ASN A 70 1 7 HELIX 2 AA2 TYR B 64 ASN B 70 1 7 HELIX 3 AA3 TYR C 64 ASN C 70 1 7 SHEET 1 AA1 4 ALA A 10 ILE A 11 0 SHEET 2 AA1 4 ALA A 2 THR A 5 -1 N CYS A 3 O ILE A 11 SHEET 3 AA1 4 ILE A 42 HIS A 45 -1 O PHE A 43 N LYS A 4 SHEET 4 AA1 4 LYS A 101 PRO A 102 -1 O LYS A 101 N CYS A 44 SHEET 1 AA2 5 GLY A 16 VAL A 22 0 SHEET 2 AA2 5 PHE A 142 ALA A 150 1 O TYR A 149 N VAL A 20 SHEET 3 AA2 5 LEU A 125 ASN A 135 -1 N ALA A 127 O ILE A 148 SHEET 4 AA2 5 ASP A 54 ALA A 63 -1 N ARG A 60 O ILE A 130 SHEET 5 AA2 5 VAL A 93 TYR A 95 -1 O VAL A 93 N VAL A 56 SHEET 1 AA3 4 LEU A 34 ASP A 37 0 SHEET 2 AA3 4 VAL A 105 PRO A 111 -1 O LEU A 109 N LEU A 34 SHEET 3 AA3 4 PHE A 71 TYR A 77 -1 N SER A 72 O THR A 110 SHEET 4 AA3 4 SER A 80 PHE A 84 -1 O SER A 80 N TYR A 77 SHEET 1 AA4 2 VAL A 118 ILE A 120 0 SHEET 2 AA4 2 VAL A 154 VAL A 155 -1 O VAL A 154 N ALA A 119 SHEET 1 AA5 4 ALA B 10 ILE B 11 0 SHEET 2 AA5 4 ALA B 2 THR B 5 -1 N CYS B 3 O ILE B 11 SHEET 3 AA5 4 ILE B 42 HIS B 45 -1 O PHE B 43 N LYS B 4 SHEET 4 AA5 4 LYS B 101 PRO B 102 -1 O LYS B 101 N CYS B 44 SHEET 1 AA6 5 GLY B 16 VAL B 22 0 SHEET 2 AA6 5 PHE B 142 ALA B 150 1 O TYR B 149 N VAL B 20 SHEET 3 AA6 5 LEU B 125 ASN B 135 -1 N LEU B 131 O PHE B 144 SHEET 4 AA6 5 ASP B 54 ALA B 63 -1 N ARG B 60 O ILE B 130 SHEET 5 AA6 5 VAL B 93 TYR B 95 -1 O TYR B 95 N ASP B 54 SHEET 1 AA7 4 LEU B 34 ASP B 37 0 SHEET 2 AA7 4 VAL B 105 PRO B 111 -1 O LEU B 109 N LEU B 34 SHEET 3 AA7 4 PHE B 71 TYR B 77 -1 N LYS B 76 O ALA B 106 SHEET 4 AA7 4 SER B 80 PHE B 84 -1 O SER B 80 N TYR B 77 SHEET 1 AA8 2 GLY B 117 ILE B 120 0 SHEET 2 AA8 2 VAL B 154 VAL B 156 -1 O VAL B 154 N ALA B 119 SHEET 1 AA9 4 ALA C 10 ILE C 11 0 SHEET 2 AA9 4 ALA C 2 THR C 5 -1 N CYS C 3 O ILE C 11 SHEET 3 AA9 4 ILE C 42 HIS C 45 -1 O PHE C 43 N LYS C 4 SHEET 4 AA9 4 LYS C 101 PRO C 102 -1 O LYS C 101 N CYS C 44 SHEET 1 AB1 5 GLY C 16 VAL C 22 0 SHEET 2 AB1 5 PHE C 142 ALA C 150 1 O TYR C 149 N VAL C 20 SHEET 3 AB1 5 LEU C 125 ASN C 135 -1 N LEU C 131 O PHE C 144 SHEET 4 AB1 5 ASP C 54 ALA C 63 -1 N ARG C 60 O ILE C 130 SHEET 5 AB1 5 VAL C 93 TYR C 95 -1 O VAL C 93 N VAL C 56 SHEET 1 AB2 4 LEU C 34 ASP C 37 0 SHEET 2 AB2 4 VAL C 105 PRO C 111 -1 O LEU C 109 N LEU C 34 SHEET 3 AB2 4 PHE C 71 TYR C 77 -1 N LYS C 76 O ALA C 106 SHEET 4 AB2 4 SER C 80 PHE C 84 -1 O SER C 80 N TYR C 77 SHEET 1 AB3 2 GLY C 117 ILE C 120 0 SHEET 2 AB3 2 VAL C 154 VAL C 156 -1 O VAL C 156 N GLY C 117 SSBOND 1 CYS A 3 CYS A 44 1555 1555 2.06 SSBOND 2 CYS B 3 CYS B 44 1555 1555 2.07 SSBOND 3 CYS C 3 CYS C 44 1555 1555 2.06 CISPEP 1 PHE A 84 PRO A 85 0 -6.00 CISPEP 2 PHE B 84 PRO B 85 0 -0.52 CISPEP 3 PHE C 84 PRO C 85 0 3.03 SITE 1 AC1 22 PHE A 1 ILE A 13 ASN A 46 ASP A 47 SITE 2 AC1 22 TYR A 48 GLU A 50 ILE A 52 ASP A 54 SITE 3 AC1 22 GLN A 133 ASN A 135 ASP A 140 SO4 A 302 SITE 4 AC1 22 HOH A 407 HOH A 425 HOH A 619 GLN B 143 SITE 5 AC1 22 HOH B 425 ILE C 13 GLY C 14 GLY C 15 SITE 6 AC1 22 PHE C 142 HOH C 418 SITE 1 AC2 9 3XO A 301 HOH A 411 HOH A 418 HOH A 446 SITE 2 AC2 9 HOH A 684 HOH B 412 GLY C 16 SER C 17 SITE 3 AC2 9 HOH C 413 SITE 1 AC3 16 PHE B 1 ILE B 13 ASN B 46 ASP B 47 SITE 2 AC3 16 TYR B 48 ILE B 52 ASP B 54 GLN B 133 SITE 3 AC3 16 ASN B 135 ASP B 140 HOH B 418 HOH B 586 SITE 4 AC3 16 HOH B 604 ARG C 60 THR C 87 3XO C 301 SITE 1 AC4 20 ILE A 13 GLY A 14 GLY A 15 PHE A 142 SITE 2 AC4 20 HOH A 412 3XO B 301 PHE C 1 ILE C 13 SITE 3 AC4 20 ASN C 46 ASP C 47 TYR C 48 ILE C 52 SITE 4 AC4 20 ASP C 54 GLN C 133 ASN C 135 ASP C 140 SITE 5 AC4 20 PHE C 142 HOH C 402 HOH C 408 HOH C 495 CRYST1 53.290 96.930 97.860 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018765 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010317 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010219 0.00000