HEADER TRANSFERASE 09-DEC-14 4X7R TITLE CRYSTAL STRUCTURE OF S. AUREUS TARM G117R MUTANT IN COMPLEX WITH TITLE 2 FONDAPARINUX, ALPHA-GLCNAC-GLYCEROL AND UDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TARM; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS SUBSP. AUREUS 21178; SOURCE 3 ORGANISM_TAXID: 904724; SOURCE 4 GENE: SA21178_0837; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET41B KEYWDS GLYCOSYLTRANSFERASE GT-B RETAINING WALL TEICHOIC ACID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.WORRALL,S.SOBHANIFAR,N.C.STRYNADKA REVDAT 7 28-FEB-24 4X7R 1 HETSYN REVDAT 6 29-JUL-20 4X7R 1 COMPND REMARK HET HETNAM REVDAT 6 2 1 HETSYN FORMUL LINK SITE REVDAT 6 3 1 ATOM REVDAT 5 20-NOV-19 4X7R 1 REMARK REVDAT 4 22-NOV-17 4X7R 1 REMARK REVDAT 3 13-SEP-17 4X7R 1 REMARK REVDAT 2 12-JUL-17 4X7R 1 SOURCE JRNL REMARK HETSYN REVDAT 2 2 1 SITE ATOM REVDAT 1 25-FEB-15 4X7R 0 JRNL AUTH S.SOBHANIFAR,L.J.WORRALL,R.J.GRUNINGER,G.A.WASNEY, JRNL AUTH 2 M.BLAUKOPF,L.BAUMANN,E.LAMEIGNERE,M.SOLOMONSON,E.D.BROWN, JRNL AUTH 3 S.G.WITHERS,N.C.STRYNADKA JRNL TITL STRUCTURE AND MECHANISM OF STAPHYLOCOCCUS AUREUS TARM, THE JRNL TITL 2 WALL TEICHOIC ACID ALPHA-GLYCOSYLTRANSFERASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 112 E576 2015 JRNL REFN ESSN 1091-6490 JRNL PMID 25624472 JRNL DOI 10.1073/PNAS.1418084112 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 87.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 71885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 3707 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.21 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.87 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5250 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1892 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5010 REMARK 3 BIN R VALUE (WORKING SET) : 0.1884 REMARK 3 BIN FREE R VALUE : 0.2047 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.57 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 240 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8080 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 272 REMARK 3 SOLVENT ATOMS : 365 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.39420 REMARK 3 B22 (A**2) : -5.80580 REMARK 3 B33 (A**2) : 3.41150 REMARK 3 B12 (A**2) : 3.29400 REMARK 3 B13 (A**2) : 3.60110 REMARK 3 B23 (A**2) : -4.58020 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.182 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.146 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.188 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.150 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8516 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11484 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 3150 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 242 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1176 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8516 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1144 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9821 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.03 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.62 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 7.1552 -1.4680 -88.8684 REMARK 3 T TENSOR REMARK 3 T11: -0.1652 T22: -0.0581 REMARK 3 T33: -0.0997 T12: -0.0590 REMARK 3 T13: 0.0303 T23: 0.0823 REMARK 3 L TENSOR REMARK 3 L11: 0.5296 L22: 0.6935 REMARK 3 L33: 2.6274 L12: -0.1935 REMARK 3 L13: 0.7302 L23: -0.8025 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: -0.1264 S13: 0.1083 REMARK 3 S21: 0.1437 S22: 0.0550 S23: -0.0336 REMARK 3 S31: -0.4003 S32: -0.0963 S33: -0.0524 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -7.2468 43.9156 -57.1550 REMARK 3 T TENSOR REMARK 3 T11: -0.1785 T22: -0.0004 REMARK 3 T33: -0.1643 T12: -0.0040 REMARK 3 T13: -0.0143 T23: 0.0579 REMARK 3 L TENSOR REMARK 3 L11: 0.4848 L22: 1.5717 REMARK 3 L33: 2.0279 L12: 0.3908 REMARK 3 L13: -0.2383 L23: -1.3756 REMARK 3 S TENSOR REMARK 3 S11: 0.0153 S12: 0.1048 S13: -0.1239 REMARK 3 S21: -0.2851 S22: -0.0582 S23: -0.0231 REMARK 3 S31: 0.3281 S32: 0.0294 S33: 0.0429 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X7R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XIA2, AIMLESS 0.3.6, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71890 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 87.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 MES PH 6.5, 10-14 % W/V PEG 20000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 127 -114.48 61.56 REMARK 500 ASN A 298 47.44 -65.76 REMARK 500 GLN A 405 -62.23 -156.34 REMARK 500 HIS A 444 -19.74 82.11 REMARK 500 ASN A 445 78.41 -67.48 REMARK 500 ARG B 117 12.25 55.08 REMARK 500 LYS B 127 -111.55 63.08 REMARK 500 ALA B 261 150.11 -48.68 REMARK 500 ASN B 298 46.76 -65.44 REMARK 500 ASN B 376 -40.44 -137.39 REMARK 500 GLN B 405 -58.91 -154.31 REMARK 500 HIS B 444 -17.38 78.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4X6L RELATED DB: PDB REMARK 900 RELATED ID: 4X7P RELATED DB: PDB REMARK 900 RELATED ID: 4X7M RELATED DB: PDB DBREF 4X7R A 1 493 UNP H0AM96 H0AM96_STAAU 1 493 DBREF 4X7R B 1 493 UNP H0AM96 H0AM96_STAAU 1 493 SEQADV 4X7R ARG A 117 UNP H0AM96 GLY 117 ENGINEERED MUTATION SEQADV 4X7R ARG B 117 UNP H0AM96 GLY 117 ENGINEERED MUTATION SEQRES 1 A 493 MET LYS LYS ILE PHE MET MET VAL HIS GLU LEU ASP VAL SEQRES 2 A 493 ASN LYS GLY GLY MET THR SER SER MET PHE ASN ARG SER SEQRES 3 A 493 LYS GLU PHE TYR ASP ALA ASP ILE PRO ALA ASP ILE VAL SEQRES 4 A 493 THR PHE ASP TYR LYS GLY ASN TYR ASP GLU ILE ILE LYS SEQRES 5 A 493 ALA LEU LYS LYS GLN GLY LYS MET ASP ARG ARG THR LYS SEQRES 6 A 493 MET TYR ASN VAL PHE GLU TYR PHE LYS GLN ILE SER ASN SEQRES 7 A 493 ASN LYS HIS PHE LYS SER ASN LYS LEU LEU TYR LYS HIS SEQRES 8 A 493 ILE SER GLU ARG LEU LYS ASN THR ILE GLU ILE GLU GLU SEQRES 9 A 493 SER LYS GLY ILE SER ARG TYR PHE ASP ILE THR THR ARG SEQRES 10 A 493 THR TYR ILE ALA TYR ILE ARG LYS SER LYS SER GLU LYS SEQRES 11 A 493 VAL ILE ASP PHE PHE LYS ASP ASN LYS ARG ILE GLU ARG SEQRES 12 A 493 PHE SER PHE ILE ASP ASN LYS VAL HIS MET LYS GLU THR SEQRES 13 A 493 PHE ASN VAL ASP ASN LYS VAL CYS TYR GLN VAL PHE TYR SEQRES 14 A 493 ASP GLU LYS GLY TYR PRO TYR ILE SER ARG ASN ILE ASN SEQRES 15 A 493 ALA ASN ASN GLY ALA VAL GLY LYS THR TYR VAL LEU VAL SEQRES 16 A 493 ASN LYS LYS GLU PHE LYS ASN ASN LEU ALA LEU CYS VAL SEQRES 17 A 493 TYR TYR LEU GLU LYS LEU ILE LYS ASP SER LYS ASP SER SEQRES 18 A 493 ILE MET ILE CYS ASP GLY PRO GLY SER PHE PRO LYS MET SEQRES 19 A 493 PHE ASN THR ASN HIS LYS ASN ALA GLN LYS TYR GLY VAL SEQRES 20 A 493 ILE HIS VAL ASN HIS HIS GLU ASN PHE ASP ASP THR GLY SEQRES 21 A 493 ALA PHE LYS LYS SER GLU LYS TYR ILE ILE GLU ASN ALA SEQRES 22 A 493 ASN LYS ILE ASN GLY VAL ILE VAL LEU THR GLU ALA GLN SEQRES 23 A 493 ARG LEU ASP ILE LEU ASN GLN PHE ASP VAL GLU ASN ILE SEQRES 24 A 493 PHE THR ILE SER ASN PHE VAL LYS ILE HIS ASN ALA PRO SEQRES 25 A 493 LYS HIS PHE GLN THR GLU LYS ILE VAL GLY HIS ILE SER SEQRES 26 A 493 ARG MET VAL PRO THR LYS ARG ILE ASP LEU LEU ILE GLU SEQRES 27 A 493 VAL ALA GLU LEU VAL VAL LYS LYS ASP ASN ALA VAL LYS SEQRES 28 A 493 PHE HIS ILE TYR GLY GLU GLY SER VAL LYS ASP LYS ILE SEQRES 29 A 493 ALA LYS MET ILE GLU ASP LYS ASN LEU GLU ARG ASN VAL SEQRES 30 A 493 PHE LEU LYS GLY TYR THR THR THR PRO GLN LYS CYS LEU SEQRES 31 A 493 GLU ASP PHE LYS LEU VAL VAL SER THR SER GLN TYR GLU SEQRES 32 A 493 GLY GLN GLY LEU SER MET ILE GLU ALA MET ILE SER LYS SEQRES 33 A 493 ARG PRO VAL VAL ALA PHE ASP ILE LYS TYR GLY PRO SER SEQRES 34 A 493 ASP PHE ILE GLU ASP ASN LYS ASN GLY TYR LEU ILE GLU SEQRES 35 A 493 ASN HIS ASN ILE ASN ASP MET ALA ASP LYS ILE LEU GLN SEQRES 36 A 493 LEU VAL ASN ASN ASP VAL LEU ALA ALA GLU PHE GLY SER SEQRES 37 A 493 LYS ALA ARG GLU ASN ILE ILE GLU LYS TYR SER THR GLU SEQRES 38 A 493 SER ILE LEU GLU LYS TRP LEU ASN LEU PHE ASN SER SEQRES 1 B 493 MET LYS LYS ILE PHE MET MET VAL HIS GLU LEU ASP VAL SEQRES 2 B 493 ASN LYS GLY GLY MET THR SER SER MET PHE ASN ARG SER SEQRES 3 B 493 LYS GLU PHE TYR ASP ALA ASP ILE PRO ALA ASP ILE VAL SEQRES 4 B 493 THR PHE ASP TYR LYS GLY ASN TYR ASP GLU ILE ILE LYS SEQRES 5 B 493 ALA LEU LYS LYS GLN GLY LYS MET ASP ARG ARG THR LYS SEQRES 6 B 493 MET TYR ASN VAL PHE GLU TYR PHE LYS GLN ILE SER ASN SEQRES 7 B 493 ASN LYS HIS PHE LYS SER ASN LYS LEU LEU TYR LYS HIS SEQRES 8 B 493 ILE SER GLU ARG LEU LYS ASN THR ILE GLU ILE GLU GLU SEQRES 9 B 493 SER LYS GLY ILE SER ARG TYR PHE ASP ILE THR THR ARG SEQRES 10 B 493 THR TYR ILE ALA TYR ILE ARG LYS SER LYS SER GLU LYS SEQRES 11 B 493 VAL ILE ASP PHE PHE LYS ASP ASN LYS ARG ILE GLU ARG SEQRES 12 B 493 PHE SER PHE ILE ASP ASN LYS VAL HIS MET LYS GLU THR SEQRES 13 B 493 PHE ASN VAL ASP ASN LYS VAL CYS TYR GLN VAL PHE TYR SEQRES 14 B 493 ASP GLU LYS GLY TYR PRO TYR ILE SER ARG ASN ILE ASN SEQRES 15 B 493 ALA ASN ASN GLY ALA VAL GLY LYS THR TYR VAL LEU VAL SEQRES 16 B 493 ASN LYS LYS GLU PHE LYS ASN ASN LEU ALA LEU CYS VAL SEQRES 17 B 493 TYR TYR LEU GLU LYS LEU ILE LYS ASP SER LYS ASP SER SEQRES 18 B 493 ILE MET ILE CYS ASP GLY PRO GLY SER PHE PRO LYS MET SEQRES 19 B 493 PHE ASN THR ASN HIS LYS ASN ALA GLN LYS TYR GLY VAL SEQRES 20 B 493 ILE HIS VAL ASN HIS HIS GLU ASN PHE ASP ASP THR GLY SEQRES 21 B 493 ALA PHE LYS LYS SER GLU LYS TYR ILE ILE GLU ASN ALA SEQRES 22 B 493 ASN LYS ILE ASN GLY VAL ILE VAL LEU THR GLU ALA GLN SEQRES 23 B 493 ARG LEU ASP ILE LEU ASN GLN PHE ASP VAL GLU ASN ILE SEQRES 24 B 493 PHE THR ILE SER ASN PHE VAL LYS ILE HIS ASN ALA PRO SEQRES 25 B 493 LYS HIS PHE GLN THR GLU LYS ILE VAL GLY HIS ILE SER SEQRES 26 B 493 ARG MET VAL PRO THR LYS ARG ILE ASP LEU LEU ILE GLU SEQRES 27 B 493 VAL ALA GLU LEU VAL VAL LYS LYS ASP ASN ALA VAL LYS SEQRES 28 B 493 PHE HIS ILE TYR GLY GLU GLY SER VAL LYS ASP LYS ILE SEQRES 29 B 493 ALA LYS MET ILE GLU ASP LYS ASN LEU GLU ARG ASN VAL SEQRES 30 B 493 PHE LEU LYS GLY TYR THR THR THR PRO GLN LYS CYS LEU SEQRES 31 B 493 GLU ASP PHE LYS LEU VAL VAL SER THR SER GLN TYR GLU SEQRES 32 B 493 GLY GLN GLY LEU SER MET ILE GLU ALA MET ILE SER LYS SEQRES 33 B 493 ARG PRO VAL VAL ALA PHE ASP ILE LYS TYR GLY PRO SER SEQRES 34 B 493 ASP PHE ILE GLU ASP ASN LYS ASN GLY TYR LEU ILE GLU SEQRES 35 B 493 ASN HIS ASN ILE ASN ASP MET ALA ASP LYS ILE LEU GLN SEQRES 36 B 493 LEU VAL ASN ASN ASP VAL LEU ALA ALA GLU PHE GLY SER SEQRES 37 B 493 LYS ALA ARG GLU ASN ILE ILE GLU LYS TYR SER THR GLU SEQRES 38 B 493 SER ILE LEU GLU LYS TRP LEU ASN LEU PHE ASN SER HET ZDO C 1 21 HET IDS C 2 16 HET SUS C 3 23 HET BDP C 4 12 HET SGN C 5 19 HET ZDO D 1 21 HET IDS D 2 16 HET SUS D 3 23 HET BDP D 4 12 HET SGN D 5 19 HET UDP A 501 25 HET 3YW A 503 20 HET UDP B 501 25 HET 3YW B 503 20 HETNAM ZDO METHYL 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D- HETNAM 2 ZDO GLUCOPYRANOSIDE HETNAM IDS 2-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID HETNAM SUS 2-DEOXY-3,6-DI-O-SULFO-2-(SULFOAMINO)-ALPHA-D- HETNAM 2 SUS GLUCOPYRANOSE HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETNAM SGN 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANOSE HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM 3YW (2S)-2,3-DIHYDROXYPROPYL 2-ACETAMIDO-2-DEOXY-ALPHA-D- HETNAM 2 3YW GLUCOPYRANOSIDE HETSYN IDS O2-SULFO-GLUCURONIC ACID; 2-O-SULFO-ALPHA-L-IDURONIC HETSYN 2 IDS ACID; 2-O-SULFO-L-IDURONIC ACID; 2-O-SULFO-IDURONIC HETSYN 3 IDS ACID HETSYN SUS 3,6-DI-O-SULFO-N-SULFO-ALPHA-D-GLUCOSAMINE; 2-DEOXY-3, HETSYN 2 SUS 6-DI-O-SULFO-2-(SULFOAMINO)-ALPHA-D-GLUCOSE; 2-DEOXY- HETSYN 3 SUS 3,6-DI-O-SULFO-2-(SULFOAMINO)-D-GLUCOSE; 2-DEOXY-3,6- HETSYN 4 SUS DI-O-SULFO-2-(SULFOAMINO)-GLUCOSE HETSYN BDP BETA-D-GLUCURONIC ACID; D-GLUCURONIC ACID; GLUCURONIC HETSYN 2 BDP ACID HETSYN SGN N,O6-DISULFO-GLUCOSAMINE; 6-O-SULFO-N-SULFO-ALPHA-D- HETSYN 2 SGN GLUCOSAMINE; 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-ALPHA-D- HETSYN 3 SGN GLUCOSE; 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-D-GLUCOSE; HETSYN 4 SGN 2-DEOXY-6-O-SULFO-2-(SULFOAMINO)-GLUCOSE HETSYN 3YW (2S)-2,3-DIHYDROXYPROPYL 2-(ACETYLAMINO)-2-DEOXY-ALPHA- HETSYN 2 3YW D-GLUCOPYRANOSIDE; (2S)-2,3-DIHYDROXYPROPYL 2- HETSYN 3 3YW ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOSIDE; (2S)-2,3- HETSYN 4 3YW DIHYDROXYPROPYL 2-ACETAMIDO-2-DEOXY-D-GLUCOSIDE; (2S)- HETSYN 5 3YW 2,3-DIHYDROXYPROPYL 2-ACETAMIDO-2-DEOXY-GLUCOSIDE FORMUL 3 ZDO 2(C7 H15 N O11 S2) FORMUL 3 IDS 2(C6 H10 O10 S) FORMUL 3 SUS 2(C6 H13 N O14 S3) FORMUL 3 BDP 2(C6 H10 O7) FORMUL 3 SGN 2(C6 H13 N O11 S2) FORMUL 5 UDP 2(C9 H14 N2 O12 P2) FORMUL 6 3YW 2(C11 H21 N O8) FORMUL 9 HOH *365(H2 O) HELIX 1 AA1 GLY A 16 ALA A 32 1 17 HELIX 2 AA2 ASN A 46 GLN A 57 1 12 HELIX 3 AA3 VAL A 69 ASN A 79 1 11 HELIX 4 AA4 ASN A 85 LEU A 96 1 12 HELIX 5 AA5 ASN A 202 ILE A 215 1 14 HELIX 6 AA6 GLY A 227 GLY A 229 5 3 HELIX 7 AA7 SER A 230 ASN A 236 1 7 HELIX 8 AA8 LYS A 263 ASN A 272 1 10 HELIX 9 AA9 ALA A 273 ILE A 276 5 4 HELIX 10 AB1 THR A 283 PHE A 294 1 12 HELIX 11 AB2 VAL A 328 LYS A 331 5 4 HELIX 12 AB3 ARG A 332 ASP A 347 1 16 HELIX 13 AB4 VAL A 360 LYS A 371 1 12 HELIX 14 AB5 THR A 385 ASP A 392 1 8 HELIX 15 AB6 GLY A 406 SER A 415 1 10 HELIX 16 AB7 GLY A 427 ILE A 432 1 6 HELIX 17 AB8 ASN A 445 ASN A 458 1 14 HELIX 18 AB9 ASN A 459 TYR A 478 1 20 HELIX 19 AC1 SER A 479 SER A 493 1 15 HELIX 20 AC2 GLY B 16 ALA B 32 1 17 HELIX 21 AC3 ASN B 46 GLN B 57 1 12 HELIX 22 AC4 VAL B 69 ASN B 79 1 11 HELIX 23 AC5 ASN B 85 LEU B 96 1 12 HELIX 24 AC6 ASN B 202 ILE B 215 1 14 HELIX 25 AC7 GLY B 227 GLY B 229 5 3 HELIX 26 AC8 SER B 230 ASN B 236 1 7 HELIX 27 AC9 LYS B 263 ASN B 272 1 10 HELIX 28 AD1 ALA B 273 ILE B 276 5 4 HELIX 29 AD2 THR B 283 PHE B 294 1 12 HELIX 30 AD3 VAL B 328 LYS B 331 5 4 HELIX 31 AD4 ARG B 332 ASP B 347 1 16 HELIX 32 AD5 VAL B 360 LYS B 371 1 12 HELIX 33 AD6 THR B 385 ASP B 392 1 8 HELIX 34 AD7 GLY B 406 SER B 415 1 10 HELIX 35 AD8 GLY B 427 ILE B 432 1 6 HELIX 36 AD9 ASN B 445 ASN B 458 1 14 HELIX 37 AE1 ASN B 459 TYR B 478 1 20 HELIX 38 AE2 SER B 479 SER B 493 1 15 SHEET 1 AA1 7 MET A 66 ASN A 68 0 SHEET 2 AA1 7 ALA A 36 THR A 40 1 N ILE A 38 O TYR A 67 SHEET 3 AA1 7 LYS A 3 MET A 7 1 N MET A 6 O ASP A 37 SHEET 4 AA1 7 SER A 221 CYS A 225 1 O ILE A 224 N PHE A 5 SHEET 5 AA1 7 GLN A 243 VAL A 247 1 O TYR A 245 N CYS A 225 SHEET 6 AA1 7 GLY A 278 VAL A 281 1 O ILE A 280 N GLY A 246 SHEET 7 AA1 7 ILE A 299 THR A 301 1 O PHE A 300 N VAL A 279 SHEET 1 AA210 THR A 99 GLU A 103 0 SHEET 2 AA210 ILE A 108 ASP A 113 -1 O ARG A 110 N ILE A 102 SHEET 3 AA210 TYR A 119 SER A 126 -1 O ILE A 120 N TYR A 111 SHEET 4 AA210 GLU A 129 LYS A 136 -1 O ASP A 133 N TYR A 122 SHEET 5 AA210 LYS A 139 ILE A 147 -1 O PHE A 146 N LYS A 130 SHEET 6 AA210 LYS A 150 PHE A 157 -1 O PHE A 157 N ILE A 141 SHEET 7 AA210 VAL A 163 TYR A 169 -1 O TYR A 165 N THR A 156 SHEET 8 AA210 PRO A 175 ILE A 181 -1 O ILE A 181 N CYS A 164 SHEET 9 AA210 VAL A 188 VAL A 193 -1 O TYR A 192 N SER A 178 SHEET 10 AA210 LYS A 198 PHE A 200 -1 O LYS A 198 N VAL A 193 SHEET 1 AA3 6 VAL A 377 GLY A 381 0 SHEET 2 AA3 6 LYS A 351 TYR A 355 1 N PHE A 352 O PHE A 378 SHEET 3 AA3 6 ILE A 320 ILE A 324 1 N VAL A 321 O LYS A 351 SHEET 4 AA3 6 LEU A 395 SER A 398 1 O LEU A 395 N GLY A 322 SHEET 5 AA3 6 VAL A 419 PHE A 422 1 O VAL A 420 N SER A 398 SHEET 6 AA3 6 GLY A 438 ILE A 441 1 O ILE A 441 N ALA A 421 SHEET 1 AA4 7 MET B 66 ASN B 68 0 SHEET 2 AA4 7 ALA B 36 THR B 40 1 N ILE B 38 O TYR B 67 SHEET 3 AA4 7 LYS B 3 MET B 7 1 N MET B 6 O ASP B 37 SHEET 4 AA4 7 SER B 221 CYS B 225 1 O ILE B 224 N PHE B 5 SHEET 5 AA4 7 GLN B 243 VAL B 247 1 O TYR B 245 N CYS B 225 SHEET 6 AA4 7 GLY B 278 VAL B 281 1 O ILE B 280 N GLY B 246 SHEET 7 AA4 7 ILE B 299 THR B 301 1 O PHE B 300 N VAL B 279 SHEET 1 AA510 THR B 99 GLU B 103 0 SHEET 2 AA510 ILE B 108 ASP B 113 -1 O ARG B 110 N ILE B 102 SHEET 3 AA510 TYR B 119 SER B 126 -1 O ILE B 123 N SER B 109 SHEET 4 AA510 GLU B 129 LYS B 136 -1 O ASP B 133 N TYR B 122 SHEET 5 AA510 LYS B 139 ILE B 147 -1 O PHE B 146 N LYS B 130 SHEET 6 AA510 LYS B 150 PHE B 157 -1 O PHE B 157 N ILE B 141 SHEET 7 AA510 VAL B 163 TYR B 169 -1 O TYR B 165 N THR B 156 SHEET 8 AA510 PRO B 175 ILE B 181 -1 O ILE B 181 N CYS B 164 SHEET 9 AA510 VAL B 188 VAL B 193 -1 O TYR B 192 N SER B 178 SHEET 10 AA510 LYS B 198 PHE B 200 -1 O LYS B 198 N VAL B 193 SHEET 1 AA6 6 VAL B 377 GLY B 381 0 SHEET 2 AA6 6 LYS B 351 TYR B 355 1 N PHE B 352 O PHE B 378 SHEET 3 AA6 6 ILE B 320 ILE B 324 1 N VAL B 321 O LYS B 351 SHEET 4 AA6 6 LEU B 395 SER B 398 1 O LEU B 395 N GLY B 322 SHEET 5 AA6 6 VAL B 419 PHE B 422 1 O VAL B 420 N SER B 398 SHEET 6 AA6 6 GLY B 438 ILE B 441 1 O ILE B 441 N ALA B 421 LINK O4 ZDO C 1 C1 IDS C 2 1555 1555 1.44 LINK O4 IDS C 2 C1 SUS C 3 1555 1555 1.44 LINK O4 SUS C 3 C1 BDP C 4 1555 1555 1.43 LINK O4 BDP C 4 C1 SGN C 5 1555 1555 1.45 LINK O4 ZDO D 1 C1 IDS D 2 1555 1555 1.43 LINK O4 IDS D 2 C1 SUS D 3 1555 1555 1.46 LINK O4 SUS D 3 C1 BDP D 4 1555 1555 1.43 LINK O4 BDP D 4 C1 SGN D 5 1555 1555 1.46 CISPEP 1 LYS A 425 TYR A 426 0 0.21 CISPEP 2 LYS B 425 TYR B 426 0 0.16 CRYST1 43.470 92.140 96.110 65.89 83.66 84.12 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023004 -0.002369 -0.001752 0.00000 SCALE2 0.000000 0.010910 -0.004786 0.00000 SCALE3 0.000000 0.000000 0.011432 0.00000