HEADER CELL ADHESION 11-DEC-14 4X9H TITLE CRYSTAL STRUCTURE OF DSCAM1 ISOFORM 8.4, N-TERMINAL FOUR IG DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOWN SYNDROME CELL ADHESION MOLECULE, ISOFORM AP; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 34-431; COMPND 5 SYNONYM: DOWN SYNDROME CELL ADHESION MOLECULE ISOFORM 8.4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DSCAM1, DSCAM, CG17800, DMEL_CG17800; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IG FOLD, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Q.CHEN REVDAT 5 08-NOV-23 4X9H 1 HETSYN LINK REVDAT 4 29-JUL-20 4X9H 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 13-SEP-17 4X9H 1 REMARK REVDAT 2 05-OCT-16 4X9H 1 JRNL REVDAT 1 16-DEC-15 4X9H 0 JRNL AUTH S.A.LI,L.CHENG,Y.YU,Q.CHEN JRNL TITL STRUCTURAL BASIS OF DSCAM1 HOMODIMERIZATION: INSIGHTS INTO JRNL TITL 2 CONTEXT CONSTRAINT FOR PROTEIN RECOGNITION JRNL REF SCI ADV V. 2 01118 2016 JRNL REFN ESSN 2375-2548 JRNL PMID 27386517 JRNL DOI 10.1126/SCIADV.1501118 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.274 REMARK 3 R VALUE (WORKING SET) : 0.272 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1149 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5253 - 5.8973 0.98 2751 120 0.2325 0.2766 REMARK 3 2 5.8973 - 4.6821 1.00 2672 158 0.2406 0.2807 REMARK 3 3 4.6821 - 4.0907 1.00 2653 168 0.2557 0.3021 REMARK 3 4 4.0907 - 3.7168 1.00 2683 128 0.2920 0.3873 REMARK 3 5 3.7168 - 3.4505 1.00 2655 149 0.3222 0.3723 REMARK 3 6 3.4505 - 3.2471 1.00 2668 125 0.3271 0.4058 REMARK 3 7 3.2471 - 3.0845 1.00 2646 146 0.3457 0.3899 REMARK 3 8 3.0845 - 2.9503 0.97 2573 155 0.3698 0.3933 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.570 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6373 REMARK 3 ANGLE : 1.007 8648 REMARK 3 CHIRALITY : 0.036 992 REMARK 3 PLANARITY : 0.004 1112 REMARK 3 DIHEDRAL : 15.394 2388 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205270. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SIIII DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22498 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V5M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH6.5, 20% (W/V) PEG 3350, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.47500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 ASP A 0 REMARK 465 ALA A 153 REMARK 465 THR A 154 REMARK 465 ASP A 155 REMARK 465 ALA A 156 REMARK 465 GLY A 396 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 ASN B 152 REMARK 465 ALA B 153 REMARK 465 THR B 154 REMARK 465 ASP B 155 REMARK 465 ALA B 156 REMARK 465 GLY B 396 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 78 163.09 177.85 REMARK 500 THR A 192 -60.21 -96.77 REMARK 500 VAL A 210 -59.95 -120.90 REMARK 500 LEU A 217 -144.54 52.13 REMARK 500 ASN A 222 -174.09 -68.10 REMARK 500 GLN A 223 67.60 64.77 REMARK 500 MET A 234 -5.13 73.14 REMARK 500 SER A 276 -117.72 52.10 REMARK 500 VAL A 300 -64.73 -93.57 REMARK 500 LEU B 52 -62.91 -122.87 REMARK 500 VAL B 75 -63.78 -97.26 REMARK 500 LYS B 160 -65.05 -136.19 REMARK 500 GLU B 173 -137.04 51.28 REMARK 500 LEU B 191 -70.87 -96.84 REMARK 500 VAL B 210 -62.38 -129.40 REMARK 500 GLN B 216 -116.37 49.99 REMARK 500 LEU B 217 -146.27 52.36 REMARK 500 ASN B 222 -136.60 60.85 REMARK 500 GLN B 223 -178.98 -170.80 REMARK 500 MET B 234 -3.75 69.47 REMARK 500 PRO B 247 -168.71 -75.00 REMARK 500 SER B 276 -117.45 53.52 REMARK 500 GLN B 383 -71.55 -108.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 220 GLY A 221 -146.54 REMARK 500 GLN A 223 GLU A 224 144.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WVR RELATED DB: PDB REMARK 900 RELATED ID: 4X5L RELATED DB: PDB REMARK 900 RELATED ID: 4X83 RELATED DB: PDB REMARK 900 RELATED ID: 4X8X RELATED DB: PDB REMARK 900 RELATED ID: 4X9F RELATED DB: PDB REMARK 900 RELATED ID: 4X9G RELATED DB: PDB REMARK 900 RELATED ID: 4X9I RELATED DB: PDB REMARK 900 RELATED ID: 4XB8 RELATED DB: PDB REMARK 900 RELATED ID: 4X9B RELATED DB: PDB REMARK 900 RELATED ID: 4XB7 RELATED DB: PDB DBREF 4X9H A -1 396 UNP Q0E9L0 Q0E9L0_DROME 34 431 DBREF 4X9H B -1 396 UNP Q0E9L0 Q0E9L0_DROME 34 431 SEQADV 4X9H GLY A -3 UNP Q0E9L0 EXPRESSION TAG SEQADV 4X9H GLY A -2 UNP Q0E9L0 EXPRESSION TAG SEQADV 4X9H GLY B -3 UNP Q0E9L0 EXPRESSION TAG SEQADV 4X9H GLY B -2 UNP Q0E9L0 EXPRESSION TAG SEQRES 1 A 400 GLY GLY ALA ASP GLN LYS GLY PRO VAL PHE LEU LYS GLU SEQRES 2 A 400 PRO THR ASN ARG ILE ASP PHE SER ASN SER THR GLY ALA SEQRES 3 A 400 GLU ILE GLU CYS LYS ALA SER GLY ASN PRO MET PRO GLU SEQRES 4 A 400 ILE ILE TRP ILE ARG SER ASP GLY THR ALA VAL GLY ASP SEQRES 5 A 400 VAL PRO GLY LEU ARG GLN ILE SER SER ASP GLY LYS LEU SEQRES 6 A 400 VAL PHE PRO PRO PHE ARG ALA GLU ASP TYR ARG GLN GLU SEQRES 7 A 400 VAL HIS ALA GLN VAL TYR ALA CYS LEU ALA ARG ASN GLN SEQRES 8 A 400 PHE GLY SER ILE ILE SER ARG ASP VAL HIS VAL ARG ALA SEQRES 9 A 400 VAL VAL SER GLN PHE TYR ILE THR GLU ALA GLU ASN GLU SEQRES 10 A 400 TYR VAL ILE LYS GLY ASN ALA ALA VAL VAL LYS CYS LYS SEQRES 11 A 400 ILE PRO SER PHE VAL ALA ASP PHE VAL GLN VAL GLU ALA SEQRES 12 A 400 TRP VAL ASP GLU GLU GLY MET GLU LEU TRP ARG ASN ASN SEQRES 13 A 400 ALA THR ASP ALA TYR ASP GLY LYS TYR LEU VAL LEU PRO SEQRES 14 A 400 SER GLY GLU LEU HIS ILE ARG GLU VAL GLY PRO GLU ASP SEQRES 15 A 400 GLY TYR LYS SER TYR GLN CYS ARG THR LYS HIS ARG LEU SEQRES 16 A 400 THR GLY GLU THR ARG LEU SER ALA THR LYS GLY ARG LEU SEQRES 17 A 400 VAL ILE THR GLU PRO VAL GLY SER VAL SER PRO GLN LEU SEQRES 18 A 400 SER GLY ASN GLY ASN GLN GLU HIS ILE THR LEU THR ARG SEQRES 19 A 400 VAL PRO LYS MET GLY SER VAL THR LEU MET CYS PRO ALA SEQRES 20 A 400 GLN ALA TYR PRO VAL PRO PHE PHE ARG TRP TYR LYS PHE SEQRES 21 A 400 ILE GLU GLY THR THR ARG LYS GLN ALA VAL VAL LEU ASN SEQRES 22 A 400 ASP ARG VAL LYS GLN VAL SER GLY THR LEU ILE ILE LYS SEQRES 23 A 400 ASP ALA VAL VAL GLU ASP SER GLY LYS TYR LEU CYS VAL SEQRES 24 A 400 VAL ASN ASN SER VAL GLY GLY GLU SER VAL GLU THR VAL SEQRES 25 A 400 LEU THR VAL THR ALA PRO LEU SER ALA LYS ILE ASP PRO SEQRES 26 A 400 PRO THR GLN THR VAL ASP PHE GLY ARG PRO ALA VAL PHE SEQRES 27 A 400 THR CYS GLN TYR THR GLY ASN PRO ILE LYS THR VAL SER SEQRES 28 A 400 TRP MET LYS ASP GLY LYS ALA ILE GLY HIS SER GLU PRO SEQRES 29 A 400 VAL LEU ARG ILE GLU SER VAL LYS LYS GLU ASP LYS GLY SEQRES 30 A 400 MET TYR GLN CYS PHE VAL ARG ASN ASP GLN GLU SER ALA SEQRES 31 A 400 GLU ALA SER ALA GLU LEU LYS LEU GLY GLY SEQRES 1 B 400 GLY GLY ALA ASP GLN LYS GLY PRO VAL PHE LEU LYS GLU SEQRES 2 B 400 PRO THR ASN ARG ILE ASP PHE SER ASN SER THR GLY ALA SEQRES 3 B 400 GLU ILE GLU CYS LYS ALA SER GLY ASN PRO MET PRO GLU SEQRES 4 B 400 ILE ILE TRP ILE ARG SER ASP GLY THR ALA VAL GLY ASP SEQRES 5 B 400 VAL PRO GLY LEU ARG GLN ILE SER SER ASP GLY LYS LEU SEQRES 6 B 400 VAL PHE PRO PRO PHE ARG ALA GLU ASP TYR ARG GLN GLU SEQRES 7 B 400 VAL HIS ALA GLN VAL TYR ALA CYS LEU ALA ARG ASN GLN SEQRES 8 B 400 PHE GLY SER ILE ILE SER ARG ASP VAL HIS VAL ARG ALA SEQRES 9 B 400 VAL VAL SER GLN PHE TYR ILE THR GLU ALA GLU ASN GLU SEQRES 10 B 400 TYR VAL ILE LYS GLY ASN ALA ALA VAL VAL LYS CYS LYS SEQRES 11 B 400 ILE PRO SER PHE VAL ALA ASP PHE VAL GLN VAL GLU ALA SEQRES 12 B 400 TRP VAL ASP GLU GLU GLY MET GLU LEU TRP ARG ASN ASN SEQRES 13 B 400 ALA THR ASP ALA TYR ASP GLY LYS TYR LEU VAL LEU PRO SEQRES 14 B 400 SER GLY GLU LEU HIS ILE ARG GLU VAL GLY PRO GLU ASP SEQRES 15 B 400 GLY TYR LYS SER TYR GLN CYS ARG THR LYS HIS ARG LEU SEQRES 16 B 400 THR GLY GLU THR ARG LEU SER ALA THR LYS GLY ARG LEU SEQRES 17 B 400 VAL ILE THR GLU PRO VAL GLY SER VAL SER PRO GLN LEU SEQRES 18 B 400 SER GLY ASN GLY ASN GLN GLU HIS ILE THR LEU THR ARG SEQRES 19 B 400 VAL PRO LYS MET GLY SER VAL THR LEU MET CYS PRO ALA SEQRES 20 B 400 GLN ALA TYR PRO VAL PRO PHE PHE ARG TRP TYR LYS PHE SEQRES 21 B 400 ILE GLU GLY THR THR ARG LYS GLN ALA VAL VAL LEU ASN SEQRES 22 B 400 ASP ARG VAL LYS GLN VAL SER GLY THR LEU ILE ILE LYS SEQRES 23 B 400 ASP ALA VAL VAL GLU ASP SER GLY LYS TYR LEU CYS VAL SEQRES 24 B 400 VAL ASN ASN SER VAL GLY GLY GLU SER VAL GLU THR VAL SEQRES 25 B 400 LEU THR VAL THR ALA PRO LEU SER ALA LYS ILE ASP PRO SEQRES 26 B 400 PRO THR GLN THR VAL ASP PHE GLY ARG PRO ALA VAL PHE SEQRES 27 B 400 THR CYS GLN TYR THR GLY ASN PRO ILE LYS THR VAL SER SEQRES 28 B 400 TRP MET LYS ASP GLY LYS ALA ILE GLY HIS SER GLU PRO SEQRES 29 B 400 VAL LEU ARG ILE GLU SER VAL LYS LYS GLU ASP LYS GLY SEQRES 30 B 400 MET TYR GLN CYS PHE VAL ARG ASN ASP GLN GLU SER ALA SEQRES 31 B 400 GLU ALA SER ALA GLU LEU LYS LEU GLY GLY HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG A 405 14 HET NAG B 405 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 6(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 7 HOH *3(H2 O) HELIX 1 AA1 ARG A 67 TYR A 71 5 5 HELIX 2 AA2 ARG A 72 HIS A 76 1 5 HELIX 3 AA3 GLY A 175 LYS A 181 5 7 HELIX 4 AA4 VAL A 285 SER A 289 5 5 HELIX 5 AA5 ARG B 72 HIS B 76 1 5 HELIX 6 AA6 GLU B 177 TYR B 180 5 4 HELIX 7 AA7 VAL B 285 SER B 289 5 5 HELIX 8 AA8 LYS B 368 LYS B 372 5 5 SHEET 1 AA1 2 LYS A 2 LYS A 8 0 SHEET 2 AA1 2 LYS A 27 ASN A 31 -1 O LYS A 27 N LYS A 8 SHEET 1 AA2 4 ARG A 13 SER A 17 0 SHEET 2 AA2 4 VAL A 96 VAL A 101 1 O VAL A 101 N PHE A 16 SHEET 3 AA2 4 ALA A 77 ASN A 86 -1 N GLN A 78 O VAL A 98 SHEET 4 AA2 4 GLU A 35 ILE A 39 -1 N ILE A 37 O LEU A 83 SHEET 1 AA3 4 ARG A 13 SER A 17 0 SHEET 2 AA3 4 VAL A 96 VAL A 101 1 O VAL A 101 N PHE A 16 SHEET 3 AA3 4 ALA A 77 ASN A 86 -1 N GLN A 78 O VAL A 98 SHEET 4 AA3 4 GLY A 89 ILE A 92 -1 O ILE A 91 N ALA A 84 SHEET 1 AA4 3 ALA A 22 GLU A 25 0 SHEET 2 AA4 3 LYS A 60 PHE A 63 -1 O PHE A 63 N ALA A 22 SHEET 3 AA4 3 GLN A 54 ILE A 55 -1 N GLN A 54 O VAL A 62 SHEET 1 AA5 2 GLU A 109 ALA A 110 0 SHEET 2 AA5 2 CYS A 125 LYS A 126 -1 O LYS A 126 N GLU A 109 SHEET 1 AA6 2 GLU A 113 ILE A 116 0 SHEET 2 AA6 2 LEU A 204 THR A 207 1 O VAL A 205 N VAL A 115 SHEET 1 AA7 3 ALA A 121 VAL A 123 0 SHEET 2 AA7 3 LEU A 169 ILE A 171 -1 O ILE A 171 N ALA A 121 SHEET 3 AA7 3 TYR A 161 VAL A 163 -1 N LEU A 162 O HIS A 170 SHEET 1 AA8 3 VAL A 135 ASP A 142 0 SHEET 2 AA8 3 TYR A 183 HIS A 189 -1 O GLN A 184 N VAL A 141 SHEET 3 AA8 3 THR A 195 LEU A 197 -1 O ARG A 196 N THR A 187 SHEET 1 AA9 9 GLN A 264 ALA A 265 0 SHEET 2 AA9 9 PHE A 250 PHE A 256 -1 N LYS A 255 O GLN A 264 SHEET 3 AA9 9 LYS A 291 ASN A 297 -1 O LEU A 293 N TYR A 254 SHEET 4 AA9 9 GLY A 302 ASP A 320 -1 O GLU A 303 N VAL A 296 SHEET 5 AA9 9 HIS A 225 PRO A 232 1 N THR A 229 O THR A 310 SHEET 6 AA9 9 GLN B 223 PRO B 232 -1 O ILE B 226 N ILE A 226 SHEET 7 AA9 9 VAL B 305 ASP B 320 1 O VAL B 308 N THR B 229 SHEET 8 AA9 9 ALA B 332 ASN B 341 -1 O GLN B 337 N LYS B 318 SHEET 9 AA9 9 VAL B 361 ILE B 364 -1 O LEU B 362 N PHE B 334 SHEET 1 AB1 8 VAL A 361 ILE A 364 0 SHEET 2 AB1 8 ALA A 332 ASN A 341 -1 N PHE A 334 O LEU A 362 SHEET 3 AB1 8 GLY A 302 ASP A 320 -1 N ASP A 320 O THR A 335 SHEET 4 AB1 8 HIS A 225 PRO A 232 1 N THR A 229 O THR A 310 SHEET 5 AB1 8 GLN B 223 PRO B 232 -1 O ILE B 226 N ILE A 226 SHEET 6 AB1 8 VAL B 305 ASP B 320 1 O VAL B 308 N THR B 229 SHEET 7 AB1 8 GLY B 290 ASN B 298 -1 N TYR B 292 O THR B 307 SHEET 8 AB1 8 GLY B 301 GLY B 302 -1 O GLY B 301 N ASN B 298 SHEET 1 AB2 4 LYS B 263 ALA B 265 0 SHEET 2 AB2 4 PHE B 250 PHE B 256 -1 N LYS B 255 O GLN B 264 SHEET 3 AB2 4 GLY B 290 ASN B 298 -1 O LEU B 293 N TYR B 254 SHEET 4 AB2 4 GLY B 301 GLY B 302 -1 O GLY B 301 N ASN B 298 SHEET 1 AB3 3 VAL A 237 LEU A 239 0 SHEET 2 AB3 3 THR A 278 ILE A 281 -1 O ILE A 281 N VAL A 237 SHEET 3 AB3 3 VAL A 272 VAL A 275 -1 N LYS A 273 O ILE A 280 SHEET 1 AB4 4 THR A 323 VAL A 326 0 SHEET 2 AB4 4 SER A 385 LEU A 394 1 O LYS A 393 N VAL A 326 SHEET 3 AB4 4 GLY A 373 ARG A 380 -1 N TYR A 375 O ALA A 390 SHEET 4 AB4 4 THR A 345 LYS A 350 -1 N SER A 347 O PHE A 378 SHEET 1 AB5 2 VAL B 5 LYS B 8 0 SHEET 2 AB5 2 LYS B 27 SER B 29 -1 O LYS B 27 N LEU B 7 SHEET 1 AB6 4 ARG B 13 PHE B 16 0 SHEET 2 AB6 4 VAL B 96 ALA B 100 1 O ARG B 99 N ILE B 14 SHEET 3 AB6 4 ALA B 77 ASN B 86 -1 N TYR B 80 O VAL B 96 SHEET 4 AB6 4 GLU B 35 ILE B 39 -1 N ILE B 37 O LEU B 83 SHEET 1 AB7 4 ARG B 13 PHE B 16 0 SHEET 2 AB7 4 VAL B 96 ALA B 100 1 O ARG B 99 N ILE B 14 SHEET 3 AB7 4 ALA B 77 ASN B 86 -1 N TYR B 80 O VAL B 96 SHEET 4 AB7 4 GLY B 89 ILE B 92 -1 O ILE B 91 N ALA B 84 SHEET 1 AB8 3 ALA B 22 GLU B 25 0 SHEET 2 AB8 3 LYS B 60 PHE B 63 -1 O PHE B 63 N ALA B 22 SHEET 3 AB8 3 GLN B 54 ILE B 55 -1 N GLN B 54 O VAL B 62 SHEET 1 AB9 2 GLU B 109 ALA B 110 0 SHEET 2 AB9 2 CYS B 125 LYS B 126 -1 O LYS B 126 N GLU B 109 SHEET 1 AC1 3 GLU B 113 ILE B 116 0 SHEET 2 AC1 3 GLY B 202 THR B 207 1 O THR B 207 N VAL B 115 SHEET 3 AC1 3 SER B 182 TYR B 183 -1 N TYR B 183 O GLY B 202 SHEET 1 AC2 3 ALA B 121 VAL B 123 0 SHEET 2 AC2 3 GLU B 168 ILE B 171 -1 O ILE B 171 N ALA B 121 SHEET 3 AC2 3 TYR B 161 LEU B 164 -1 N LEU B 162 O HIS B 170 SHEET 1 AC3 3 VAL B 135 ALA B 139 0 SHEET 2 AC3 3 ARG B 186 HIS B 189 -1 O ARG B 186 N ALA B 139 SHEET 3 AC3 3 THR B 195 LEU B 197 -1 O ARG B 196 N THR B 187 SHEET 1 AC4 2 VAL B 272 VAL B 275 0 SHEET 2 AC4 2 THR B 278 ILE B 281 -1 O THR B 278 N VAL B 275 SHEET 1 AC5 2 THR B 323 ASP B 327 0 SHEET 2 AC5 2 GLU B 391 GLY B 395 1 O LYS B 393 N GLN B 324 SHEET 1 AC6 4 ALA B 354 ILE B 355 0 SHEET 2 AC6 4 THR B 345 LYS B 350 -1 N TRP B 348 O ILE B 355 SHEET 3 AC6 4 TYR B 375 ARG B 380 -1 O PHE B 378 N SER B 347 SHEET 4 AC6 4 SER B 385 ALA B 388 -1 O ALA B 386 N VAL B 379 SSBOND 1 CYS A 26 CYS A 82 1555 1555 2.03 SSBOND 2 CYS A 125 CYS A 185 1555 1555 2.03 SSBOND 3 CYS A 241 CYS A 294 1555 1555 2.03 SSBOND 4 CYS A 336 CYS A 377 1555 1555 2.03 SSBOND 5 CYS B 26 CYS B 82 1555 1555 2.03 SSBOND 6 CYS B 125 CYS B 185 1555 1555 2.03 SSBOND 7 CYS B 241 CYS B 294 1555 1555 2.03 SSBOND 8 CYS B 336 CYS B 377 1555 1555 2.03 LINK ND2 ASN A 18 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 297 C1 NAG A 405 1555 1555 1.44 LINK ND2 ASN B 18 C1 NAG D 1 1555 1555 1.43 LINK ND2 ASN B 297 C1 NAG B 405 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.46 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 CISPEP 1 ASN A 31 PRO A 32 0 8.60 CISPEP 2 TYR A 246 PRO A 247 0 -8.64 CISPEP 3 ASP A 320 PRO A 321 0 -10.52 CISPEP 4 ASN A 341 PRO A 342 0 -9.79 CISPEP 5 ASN B 31 PRO B 32 0 -1.45 CISPEP 6 TYR B 246 PRO B 247 0 -22.94 CISPEP 7 ASP B 320 PRO B 321 0 -10.90 CISPEP 8 ASN B 341 PRO B 342 0 -10.99 CRYST1 95.222 60.950 92.351 90.00 93.56 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010502 0.000000 0.000653 0.00000 SCALE2 0.000000 0.016407 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010849 0.00000