HEADER CELL ADHESION 11-DEC-14 4X9I TITLE CRYSTAL STRUCTURE OF DSCAM1 ISOFORM 9.44, N-TERMINAL FOUR IG DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOWN SYNDROME CELL ADHESION MOLECULE, ISOFORM 9.44; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL FOUR IG DOMAINS; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_TAXID: 7227; SOURCE 4 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS IG FOLD, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Q.CHEN,Y.YU,S.A.LI,L.CHENG REVDAT 4 08-NOV-23 4X9I 1 HETSYN LINK REVDAT 3 29-JUL-20 4X9I 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 05-OCT-16 4X9I 1 JRNL REVDAT 1 16-DEC-15 4X9I 0 JRNL AUTH S.A.LI,L.CHENG,Y.YU,Q.CHEN JRNL TITL STRUCTURAL BASIS OF DSCAM1 HOMODIMERIZATION: INSIGHTS INTO JRNL TITL 2 CONTEXT CONSTRAINT FOR PROTEIN RECOGNITION JRNL REF SCI ADV V. 2 01118 2016 JRNL REFN ESSN 2375-2548 JRNL PMID 27386517 JRNL DOI 10.1126/SCIADV.1501118 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 20851 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.170 REMARK 3 FREE R VALUE TEST SET COUNT : 1078 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4952 - 5.8038 0.93 2480 135 0.1910 0.2126 REMARK 3 2 5.8038 - 4.6081 0.96 2473 139 0.1766 0.2371 REMARK 3 3 4.6081 - 4.0260 0.96 2433 162 0.1804 0.2182 REMARK 3 4 4.0260 - 3.6581 0.97 2478 132 0.2133 0.3072 REMARK 3 5 3.6581 - 3.3960 0.98 2505 139 0.2436 0.3341 REMARK 3 6 3.3960 - 3.1958 0.98 2464 127 0.2746 0.3488 REMARK 3 7 3.1958 - 3.0358 0.97 2487 116 0.3070 0.3236 REMARK 3 8 3.0358 - 2.9037 0.97 2453 128 0.3379 0.4494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6342 REMARK 3 ANGLE : 0.842 8609 REMARK 3 CHIRALITY : 0.035 994 REMARK 3 PLANARITY : 0.003 1107 REMARK 3 DIHEDRAL : 12.222 2354 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4X9I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205276. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20863 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2V5M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, PH 4.6, 25% (W/V) REMARK 280 PEG 1500, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.33650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 ASP A 0 REMARK 465 GLY A 392 REMARK 465 GLY B -3 REMARK 465 GLY B -2 REMARK 465 GLY B 392 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 75 -61.35 -107.20 REMARK 500 SER A 230 -1.56 73.16 REMARK 500 ARG A 267 -60.36 -109.13 REMARK 500 SER A 272 -115.95 52.57 REMARK 500 LEU B 52 -61.33 -121.08 REMARK 500 ALA B 198 -4.56 67.62 REMARK 500 SER B 230 -3.01 72.09 REMARK 500 THR B 256 -17.90 76.98 REMARK 500 ARG B 267 -63.27 -98.59 REMARK 500 PHE B 324 -1.88 86.80 REMARK 500 SER B 362 71.07 59.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4WVR RELATED DB: PDB REMARK 900 RELATED ID: 4X5L RELATED DB: PDB REMARK 900 RELATED ID: 4X83 RELATED DB: PDB REMARK 900 RELATED ID: 4X8X RELATED DB: PDB REMARK 900 RELATED ID: 4X9F RELATED DB: PDB REMARK 900 RELATED ID: 4X9G RELATED DB: PDB REMARK 900 RELATED ID: 4X9H RELATED DB: PDB REMARK 900 RELATED ID: 4XB8 RELATED DB: PDB REMARK 900 RELATED ID: 4X9B RELATED DB: PDB REMARK 900 RELATED ID: 4XB7 RELATED DB: PDB DBREF 4X9I A -3 392 PDB 4X9I 4X9I -3 392 DBREF 4X9I B -3 392 PDB 4X9I 4X9I -3 392 SEQRES 1 A 396 GLY GLY ALA ASP GLN LYS GLY PRO VAL PHE LEU LYS GLU SEQRES 2 A 396 PRO THR ASN ARG ILE ASP PHE SER ASN SER THR GLY ALA SEQRES 3 A 396 GLU ILE GLU CYS LYS ALA SER GLY ASN PRO MET PRO GLU SEQRES 4 A 396 ILE ILE TRP ILE ARG SER ASP GLY THR ALA VAL GLY ASP SEQRES 5 A 396 VAL PRO GLY LEU ARG GLN ILE SER SER ASP GLY LYS LEU SEQRES 6 A 396 VAL PHE PRO PRO PHE ARG ALA GLU ASP TYR ARG GLN GLU SEQRES 7 A 396 VAL HIS ALA GLN VAL TYR ALA CYS LEU ALA ARG ASN GLN SEQRES 8 A 396 PHE GLY SER ILE ILE SER ARG ASP VAL HIS VAL ARG ALA SEQRES 9 A 396 VAL VAL ILE GLN SER TYR GLU SER GLU ALA ASP ASN GLU SEQRES 10 A 396 TYR VAL ILE ARG GLY ASN SER VAL VAL MET LYS CYS GLU SEQRES 11 A 396 ILE PRO SER TYR VAL ALA ASP PHE VAL PHE VAL ASP LEU SEQRES 12 A 396 TRP LEU ASP SER GLU GLY ARG ASN TYR TYR PRO ASN ASN SEQRES 13 A 396 ALA ALA GLU THR ASP GLY LYS TYR LEU VAL LEU PRO SER SEQRES 14 A 396 GLY GLU LEU HIS ILE ARG GLU VAL GLY PRO GLU ASP GLY SEQRES 15 A 396 TYR LYS SER TYR GLN CYS ARG THR LYS HIS ARG LEU THR SEQRES 16 A 396 GLY GLU THR ARG LEU SER ALA THR LYS GLY ARG LEU VAL SEQRES 17 A 396 ILE THR GLU PRO VAL GLY SER LYS ALA PRO THR PHE ALA SEQRES 18 A 396 THR ALA SER LYS ILE SER SER LEU LEU GLY SER SER SER SEQRES 19 A 396 SER ASP ILE VAL LEU LEU CYS GLN ALA GLN ALA PHE PRO SEQRES 20 A 396 VAL PRO TYR THR ARG TRP TYR LYS PHE ILE GLU GLY THR SEQRES 21 A 396 THR ARG LYS GLN ALA VAL VAL LEU ASN ASP ARG VAL LYS SEQRES 22 A 396 GLN VAL SER GLY THR LEU ILE ILE LYS ASP ALA VAL VAL SEQRES 23 A 396 GLU ASP SER GLY LYS TYR LEU CYS VAL VAL ASN ASN SER SEQRES 24 A 396 VAL GLY GLY GLU SER VAL GLU THR VAL LEU THR VAL THR SEQRES 25 A 396 ALA PRO LEU SER ALA LYS ILE ASP PRO PRO THR GLN THR SEQRES 26 A 396 VAL ASP PHE GLY ARG PRO ALA VAL PHE THR CYS GLN TYR SEQRES 27 A 396 THR GLY ASN PRO ILE LYS THR VAL SER TRP MET LYS ASP SEQRES 28 A 396 GLY LYS ALA ILE GLY HIS SER GLU PRO VAL LEU ARG ILE SEQRES 29 A 396 GLU SER VAL LYS LYS GLU ASP LYS GLY MET TYR GLN CYS SEQRES 30 A 396 PHE VAL ARG ASN ASP GLN GLU SER ALA GLU ALA SER ALA SEQRES 31 A 396 GLU LEU LYS LEU GLY GLY SEQRES 1 B 396 GLY GLY ALA ASP GLN LYS GLY PRO VAL PHE LEU LYS GLU SEQRES 2 B 396 PRO THR ASN ARG ILE ASP PHE SER ASN SER THR GLY ALA SEQRES 3 B 396 GLU ILE GLU CYS LYS ALA SER GLY ASN PRO MET PRO GLU SEQRES 4 B 396 ILE ILE TRP ILE ARG SER ASP GLY THR ALA VAL GLY ASP SEQRES 5 B 396 VAL PRO GLY LEU ARG GLN ILE SER SER ASP GLY LYS LEU SEQRES 6 B 396 VAL PHE PRO PRO PHE ARG ALA GLU ASP TYR ARG GLN GLU SEQRES 7 B 396 VAL HIS ALA GLN VAL TYR ALA CYS LEU ALA ARG ASN GLN SEQRES 8 B 396 PHE GLY SER ILE ILE SER ARG ASP VAL HIS VAL ARG ALA SEQRES 9 B 396 VAL VAL ILE GLN SER TYR GLU SER GLU ALA ASP ASN GLU SEQRES 10 B 396 TYR VAL ILE ARG GLY ASN SER VAL VAL MET LYS CYS GLU SEQRES 11 B 396 ILE PRO SER TYR VAL ALA ASP PHE VAL PHE VAL ASP LEU SEQRES 12 B 396 TRP LEU ASP SER GLU GLY ARG ASN TYR TYR PRO ASN ASN SEQRES 13 B 396 ALA ALA GLU THR ASP GLY LYS TYR LEU VAL LEU PRO SER SEQRES 14 B 396 GLY GLU LEU HIS ILE ARG GLU VAL GLY PRO GLU ASP GLY SEQRES 15 B 396 TYR LYS SER TYR GLN CYS ARG THR LYS HIS ARG LEU THR SEQRES 16 B 396 GLY GLU THR ARG LEU SER ALA THR LYS GLY ARG LEU VAL SEQRES 17 B 396 ILE THR GLU PRO VAL GLY SER LYS ALA PRO THR PHE ALA SEQRES 18 B 396 THR ALA SER LYS ILE SER SER LEU LEU GLY SER SER SER SEQRES 19 B 396 SER ASP ILE VAL LEU LEU CYS GLN ALA GLN ALA PHE PRO SEQRES 20 B 396 VAL PRO TYR THR ARG TRP TYR LYS PHE ILE GLU GLY THR SEQRES 21 B 396 THR ARG LYS GLN ALA VAL VAL LEU ASN ASP ARG VAL LYS SEQRES 22 B 396 GLN VAL SER GLY THR LEU ILE ILE LYS ASP ALA VAL VAL SEQRES 23 B 396 GLU ASP SER GLY LYS TYR LEU CYS VAL VAL ASN ASN SER SEQRES 24 B 396 VAL GLY GLY GLU SER VAL GLU THR VAL LEU THR VAL THR SEQRES 25 B 396 ALA PRO LEU SER ALA LYS ILE ASP PRO PRO THR GLN THR SEQRES 26 B 396 VAL ASP PHE GLY ARG PRO ALA VAL PHE THR CYS GLN TYR SEQRES 27 B 396 THR GLY ASN PRO ILE LYS THR VAL SER TRP MET LYS ASP SEQRES 28 B 396 GLY LYS ALA ILE GLY HIS SER GLU PRO VAL LEU ARG ILE SEQRES 29 B 396 GLU SER VAL LYS LYS GLU ASP LYS GLY MET TYR GLN CYS SEQRES 30 B 396 PHE VAL ARG ASN ASP GLN GLU SER ALA GLU ALA SER ALA SEQRES 31 B 396 GLU LEU LYS LEU GLY GLY HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET GOL A 407 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 8(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *2(H2 O) HELIX 1 AA1 ARG A 67 TYR A 71 5 5 HELIX 2 AA2 ARG A 72 ALA A 77 1 6 HELIX 3 AA3 GLY A 174 GLY A 178 5 5 HELIX 4 AA4 VAL A 281 SER A 285 5 5 HELIX 5 AA5 ARG B 67 TYR B 71 5 5 HELIX 6 AA6 GLY B 174 TYR B 179 5 6 HELIX 7 AA7 VAL B 281 SER B 285 5 5 HELIX 8 AA8 LYS B 364 LYS B 368 5 5 SHEET 1 AA1 2 LYS A 2 LYS A 8 0 SHEET 2 AA1 2 LYS A 27 ASN A 31 -1 O SER A 29 N VAL A 5 SHEET 1 AA2 4 ARG A 13 SER A 17 0 SHEET 2 AA2 4 VAL A 96 VAL A 101 1 O HIS A 97 N ILE A 14 SHEET 3 AA2 4 VAL A 79 ARG A 85 -1 N TYR A 80 O VAL A 96 SHEET 4 AA2 4 GLU A 35 ARG A 40 -1 N ILE A 37 O LEU A 83 SHEET 1 AA3 4 ARG A 13 SER A 17 0 SHEET 2 AA3 4 VAL A 96 VAL A 101 1 O HIS A 97 N ILE A 14 SHEET 3 AA3 4 VAL A 79 ARG A 85 -1 N TYR A 80 O VAL A 96 SHEET 4 AA3 4 SER A 90 ILE A 92 -1 O ILE A 91 N ALA A 84 SHEET 1 AA4 3 ALA A 22 ILE A 24 0 SHEET 2 AA4 3 LEU A 61 PHE A 63 -1 O LEU A 61 N ILE A 24 SHEET 3 AA4 3 GLN A 54 ILE A 55 -1 N GLN A 54 O VAL A 62 SHEET 1 AA5 2 GLU A 109 ALA A 110 0 SHEET 2 AA5 2 CYS A 125 GLU A 126 -1 O GLU A 126 N GLU A 109 SHEET 1 AA6 5 GLU A 113 ILE A 116 0 SHEET 2 AA6 5 GLY A 201 THR A 206 1 O VAL A 204 N VAL A 115 SHEET 3 AA6 5 SER A 181 HIS A 188 -1 N TYR A 182 O GLY A 201 SHEET 4 AA6 5 VAL A 135 ASP A 142 -1 N LEU A 141 O GLN A 183 SHEET 5 AA6 5 ASN A 147 TYR A 148 -1 O TYR A 148 N TRP A 140 SHEET 1 AA7 4 GLU A 113 ILE A 116 0 SHEET 2 AA7 4 GLY A 201 THR A 206 1 O VAL A 204 N VAL A 115 SHEET 3 AA7 4 SER A 181 HIS A 188 -1 N TYR A 182 O GLY A 201 SHEET 4 AA7 4 THR A 194 LEU A 196 -1 O ARG A 195 N THR A 186 SHEET 1 AA8 3 VAL A 121 MET A 123 0 SHEET 2 AA8 3 LEU A 168 ILE A 170 -1 O ILE A 170 N VAL A 121 SHEET 3 AA8 3 TYR A 160 VAL A 162 -1 N LEU A 161 O HIS A 169 SHEET 1 AA9 2 LYS A 212 PHE A 216 0 SHEET 2 AA9 2 ALA A 239 PHE A 242 -1 O PHE A 242 N LYS A 212 SHEET 1 AB1 5 ILE A 222 SER A 228 0 SHEET 2 AB1 5 GLY A 298 ASP A 316 1 O THR A 308 N GLY A 227 SHEET 3 AB1 5 GLY A 286 ASN A 293 -1 N TYR A 288 O THR A 303 SHEET 4 AB1 5 TYR A 246 PHE A 252 -1 N TYR A 250 O LEU A 289 SHEET 5 AB1 5 LYS A 259 ALA A 261 -1 O GLN A 260 N LYS A 251 SHEET 1 AB2 4 ILE A 222 SER A 228 0 SHEET 2 AB2 4 GLY A 298 ASP A 316 1 O THR A 308 N GLY A 227 SHEET 3 AB2 4 ALA A 328 ASN A 337 -1 O GLN A 333 N LYS A 314 SHEET 4 AB2 4 VAL A 357 ILE A 360 -1 O LEU A 358 N PHE A 330 SHEET 1 AB3 3 ILE A 233 LEU A 235 0 SHEET 2 AB3 3 THR A 274 ILE A 277 -1 O LEU A 275 N LEU A 235 SHEET 3 AB3 3 VAL A 268 VAL A 271 -1 N LYS A 269 O ILE A 276 SHEET 1 AB4 5 THR A 319 VAL A 322 0 SHEET 2 AB4 5 SER A 381 LEU A 390 1 O LYS A 389 N GLN A 320 SHEET 3 AB4 5 GLY A 369 ARG A 376 -1 N TYR A 371 O ALA A 386 SHEET 4 AB4 5 THR A 341 LYS A 346 -1 N SER A 343 O PHE A 374 SHEET 5 AB4 5 LYS A 349 ALA A 350 -1 O LYS A 349 N LYS A 346 SHEET 1 AB5 2 LYS B 2 LYS B 8 0 SHEET 2 AB5 2 LYS B 27 ASN B 31 -1 O SER B 29 N VAL B 5 SHEET 1 AB6 4 ARG B 13 SER B 17 0 SHEET 2 AB6 4 VAL B 96 VAL B 101 1 O HIS B 97 N ILE B 14 SHEET 3 AB6 4 VAL B 79 ARG B 85 -1 N TYR B 80 O VAL B 96 SHEET 4 AB6 4 GLU B 35 ARG B 40 -1 N ILE B 37 O LEU B 83 SHEET 1 AB7 4 ARG B 13 SER B 17 0 SHEET 2 AB7 4 VAL B 96 VAL B 101 1 O HIS B 97 N ILE B 14 SHEET 3 AB7 4 VAL B 79 ARG B 85 -1 N TYR B 80 O VAL B 96 SHEET 4 AB7 4 SER B 90 ILE B 92 -1 O ILE B 91 N ALA B 84 SHEET 1 AB8 3 ALA B 22 GLU B 25 0 SHEET 2 AB8 3 LYS B 60 PHE B 63 -1 O LEU B 61 N ILE B 24 SHEET 3 AB8 3 GLN B 54 ILE B 55 -1 N GLN B 54 O VAL B 62 SHEET 1 AB9 2 GLU B 109 ALA B 110 0 SHEET 2 AB9 2 CYS B 125 GLU B 126 -1 O GLU B 126 N GLU B 109 SHEET 1 AC1 5 GLU B 113 ILE B 116 0 SHEET 2 AC1 5 GLY B 201 THR B 206 1 O VAL B 204 N VAL B 115 SHEET 3 AC1 5 SER B 181 HIS B 188 -1 N TYR B 182 O GLY B 201 SHEET 4 AC1 5 VAL B 135 ASP B 142 -1 N LEU B 141 O GLN B 183 SHEET 5 AC1 5 ASN B 147 TYR B 148 -1 O TYR B 148 N TRP B 140 SHEET 1 AC2 4 GLU B 113 ILE B 116 0 SHEET 2 AC2 4 GLY B 201 THR B 206 1 O VAL B 204 N VAL B 115 SHEET 3 AC2 4 SER B 181 HIS B 188 -1 N TYR B 182 O GLY B 201 SHEET 4 AC2 4 THR B 194 LEU B 196 -1 O ARG B 195 N THR B 186 SHEET 1 AC3 3 VAL B 121 MET B 123 0 SHEET 2 AC3 3 LEU B 168 ILE B 170 -1 O ILE B 170 N VAL B 121 SHEET 3 AC3 3 TYR B 160 VAL B 162 -1 N LEU B 161 O HIS B 169 SHEET 1 AC4 2 LYS B 212 PHE B 216 0 SHEET 2 AC4 2 ALA B 239 PHE B 242 -1 O PHE B 242 N LYS B 212 SHEET 1 AC5 5 ILE B 222 SER B 228 0 SHEET 2 AC5 5 GLY B 298 ILE B 315 1 O THR B 308 N GLY B 227 SHEET 3 AC5 5 GLY B 286 ASN B 293 -1 N TYR B 288 O THR B 303 SHEET 4 AC5 5 TYR B 246 PHE B 252 -1 N ARG B 248 O VAL B 291 SHEET 5 AC5 5 LYS B 259 ALA B 261 -1 O GLN B 260 N LYS B 251 SHEET 1 AC6 4 ILE B 222 SER B 228 0 SHEET 2 AC6 4 GLY B 298 ILE B 315 1 O THR B 308 N GLY B 227 SHEET 3 AC6 4 ALA B 328 ASN B 337 -1 O GLN B 333 N LYS B 314 SHEET 4 AC6 4 VAL B 357 ILE B 360 -1 O LEU B 358 N PHE B 330 SHEET 1 AC7 3 ILE B 233 LEU B 235 0 SHEET 2 AC7 3 THR B 274 ILE B 277 -1 O ILE B 277 N ILE B 233 SHEET 3 AC7 3 VAL B 268 VAL B 271 -1 N VAL B 271 O THR B 274 SHEET 1 AC8 5 THR B 319 VAL B 322 0 SHEET 2 AC8 5 SER B 381 LEU B 390 1 O LYS B 389 N GLN B 320 SHEET 3 AC8 5 GLY B 369 ARG B 376 -1 N TYR B 371 O ALA B 386 SHEET 4 AC8 5 THR B 341 LYS B 346 -1 N MET B 345 O GLN B 372 SHEET 5 AC8 5 LYS B 349 ALA B 350 -1 O LYS B 349 N LYS B 346 SSBOND 1 CYS A 26 CYS A 82 1555 1555 2.03 SSBOND 2 CYS A 125 CYS A 184 1555 1555 2.03 SSBOND 3 CYS A 237 CYS A 290 1555 1555 2.03 SSBOND 4 CYS A 332 CYS A 373 1555 1555 2.03 SSBOND 5 CYS B 26 CYS B 82 1555 1555 2.03 SSBOND 6 CYS B 125 CYS B 184 1555 1555 2.03 SSBOND 7 CYS B 237 CYS B 290 1555 1555 2.03 SSBOND 8 CYS B 332 CYS B 373 1555 1555 2.03 LINK ND2 ASN A 18 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 293 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 18 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 293 C1 NAG F 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 CISPEP 1 ASN A 31 PRO A 32 0 12.19 CISPEP 2 PHE A 242 PRO A 243 0 -8.39 CISPEP 3 ASP A 316 PRO A 317 0 -1.27 CISPEP 4 ASN A 337 PRO A 338 0 -4.75 CISPEP 5 ASN B 31 PRO B 32 0 14.15 CISPEP 6 PHE B 242 PRO B 243 0 -7.61 CISPEP 7 ASN B 337 PRO B 338 0 -7.01 CRYST1 66.746 56.673 128.688 90.00 92.05 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014982 0.000000 0.000535 0.00000 SCALE2 0.000000 0.017645 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007776 0.00000