HEADER TRANSFERASE/PEPTIDE 17-DEC-14 4XBU TITLE IN VITRO CRYSTAL STRUCTURE OF PAK4 IN COMPLEX WITH INKA PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 286-591; COMPND 5 SYNONYM: P21-ACTIVATED KINASE 4,PAK-4; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN FAM212A; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: UNP RESIDUES 167-190; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK4, KIAA1142; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSY5; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS PAK4, INKA, TRANSFERASE-PEPTIDE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.BASKARAN,K.C.ANG,P.V.ANEKAL,W.L.CHAN,J.M.GRIMES,E.MANSER, AUTHOR 2 R.C.ROBINSON REVDAT 4 08-NOV-23 4XBU 1 REMARK REVDAT 3 04-OCT-17 4XBU 1 REMARK REVDAT 2 09-DEC-15 4XBU 1 JRNL REVDAT 1 02-DEC-15 4XBU 0 JRNL AUTH Y.BASKARAN,K.C.ANG,P.V.ANEKAL,W.L.CHAN,J.M.GRIMES,E.MANSER, JRNL AUTH 2 R.C.ROBINSON JRNL TITL AN IN CELLULO-DERIVED STRUCTURE OF PAK4 IN COMPLEX WITH ITS JRNL TITL 2 INHIBITOR INKA1 JRNL REF NAT COMMUN V. 6 8681 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26607847 JRNL DOI 10.1038/NCOMMS9681 REMARK 2 REMARK 2 RESOLUTION. 2.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24538 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1262 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.06 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1789 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.3300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2419 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.177 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.165 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.589 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2467 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2456 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3340 ; 2.035 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5644 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 304 ; 6.421 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;35.899 ;23.241 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 445 ;15.600 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;16.301 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 377 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2738 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 545 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1222 ; 3.690 ; 3.749 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1221 ; 3.674 ; 3.748 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1524 ; 4.832 ; 5.598 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1525 ; 4.830 ; 5.600 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1245 ; 4.530 ; 4.235 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1245 ; 4.528 ; 4.235 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1817 ; 6.512 ; 6.160 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2915 ; 8.126 ;30.735 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2857 ; 8.091 ;30.471 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4XBU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-DEC-14. REMARK 100 THE DEPOSITION ID IS D_1000205408. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 0.3.6.0 REMARK 200 DATA SCALING SOFTWARE : XIA2 0.3.6.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25890 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.060 REMARK 200 RESOLUTION RANGE LOW (A) : 32.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4FIE REMARK 200 REMARK 200 REMARK: BIPYRAMIDAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL, PEG 8000, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.07500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.81000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.81000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.03750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.81000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.81000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.11250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.81000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.81000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.03750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.81000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.81000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 138.11250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 92.07500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 266 REMARK 465 ALA A 267 REMARK 465 GLU A 268 REMARK 465 GLU A 269 REMARK 465 HIS A 270 REMARK 465 HIS A 271 REMARK 465 HIS A 272 REMARK 465 HIS A 273 REMARK 465 HIS A 274 REMARK 465 HIS A 275 REMARK 465 HIS A 276 REMARK 465 HIS A 277 REMARK 465 LEU A 278 REMARK 465 GLU A 279 REMARK 465 VAL A 280 REMARK 465 LEU A 281 REMARK 465 PHE A 282 REMARK 465 GLN A 283 REMARK 465 GLY A 284 REMARK 465 PRO A 285 REMARK 465 PRO A 286 REMARK 465 PRO A 287 REMARK 465 GLY A 288 REMARK 465 PRO A 289 REMARK 465 ARG A 290 REMARK 465 SER A 291 REMARK 465 PRO A 292 REMARK 465 GLN A 293 REMARK 465 ARG A 294 REMARK 465 GLU A 295 REMARK 465 PRO A 296 REMARK 465 THR A 590 REMARK 465 ARG A 591 REMARK 465 ALA B 167 REMARK 465 GLU B 168 REMARK 465 ASP B 169 REMARK 465 TRP B 170 REMARK 465 THR B 171 REMARK 465 ALA B 172 REMARK 465 ALA B 173 REMARK 465 LEU B 174 REMARK 465 LEU B 175 REMARK 465 ASN B 176 REMARK 465 ARG B 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 512 O HOH A 707 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 398 CA - CB - CG ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 389 35.18 -99.29 REMARK 500 PRO A 494 -19.60 -44.43 REMARK 500 ASN A 537 36.28 -90.78 REMARK 500 LEU A 553 53.04 -92.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4XBR RELATED DB: PDB DBREF 4XBU A 286 591 UNP O96013 PAK4_HUMAN 286 591 DBREF 4XBU B 167 190 UNP Q96EL1 F212A_HUMAN 167 190 SEQADV 4XBU MET A 266 UNP O96013 EXPRESSION TAG SEQADV 4XBU ALA A 267 UNP O96013 EXPRESSION TAG SEQADV 4XBU GLU A 268 UNP O96013 EXPRESSION TAG SEQADV 4XBU GLU A 269 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 270 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 271 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 272 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 273 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 274 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 275 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 276 UNP O96013 EXPRESSION TAG SEQADV 4XBU HIS A 277 UNP O96013 EXPRESSION TAG SEQADV 4XBU LEU A 278 UNP O96013 EXPRESSION TAG SEQADV 4XBU GLU A 279 UNP O96013 EXPRESSION TAG SEQADV 4XBU VAL A 280 UNP O96013 EXPRESSION TAG SEQADV 4XBU LEU A 281 UNP O96013 EXPRESSION TAG SEQADV 4XBU PHE A 282 UNP O96013 EXPRESSION TAG SEQADV 4XBU GLN A 283 UNP O96013 EXPRESSION TAG SEQADV 4XBU GLY A 284 UNP O96013 EXPRESSION TAG SEQADV 4XBU PRO A 285 UNP O96013 EXPRESSION TAG SEQRES 1 A 326 MET ALA GLU GLU HIS HIS HIS HIS HIS HIS HIS HIS LEU SEQRES 2 A 326 GLU VAL LEU PHE GLN GLY PRO PRO PRO GLY PRO ARG SER SEQRES 3 A 326 PRO GLN ARG GLU PRO GLN ARG VAL SER HIS GLU GLN PHE SEQRES 4 A 326 ARG ALA ALA LEU GLN LEU VAL VAL ASP PRO GLY ASP PRO SEQRES 5 A 326 ARG SER TYR LEU ASP ASN PHE ILE LYS ILE GLY GLU GLY SEQRES 6 A 326 SER THR GLY ILE VAL CYS ILE ALA THR VAL ARG SER SER SEQRES 7 A 326 GLY LYS LEU VAL ALA VAL LYS LYS MET ASP LEU ARG LYS SEQRES 8 A 326 GLN GLN ARG ARG GLU LEU LEU PHE ASN GLU VAL VAL ILE SEQRES 9 A 326 MET ARG ASP TYR GLN HIS GLU ASN VAL VAL GLU MET TYR SEQRES 10 A 326 ASN SER TYR LEU VAL GLY ASP GLU LEU TRP VAL VAL MET SEQRES 11 A 326 GLU PHE LEU GLU GLY GLY ALA LEU THR ASP ILE VAL THR SEQRES 12 A 326 HIS THR ARG MET ASN GLU GLU GLN ILE ALA ALA VAL CYS SEQRES 13 A 326 LEU ALA VAL LEU GLN ALA LEU SER VAL LEU HIS ALA GLN SEQRES 14 A 326 GLY VAL ILE HIS ARG ASP ILE LYS SER ASP SER ILE LEU SEQRES 15 A 326 LEU THR HIS ASP GLY ARG VAL LYS LEU SER ASP PHE GLY SEQRES 16 A 326 PHE CYS ALA GLN VAL SER LYS GLU VAL PRO ARG ARG LYS SEQRES 17 A 326 SEP LEU VAL GLY THR PRO TYR TRP MET ALA PRO GLU LEU SEQRES 18 A 326 ILE SER ARG LEU PRO TYR GLY PRO GLU VAL ASP ILE TRP SEQRES 19 A 326 SER LEU GLY ILE MET VAL ILE GLU MET VAL ASP GLY GLU SEQRES 20 A 326 PRO PRO TYR PHE ASN GLU PRO PRO LEU LYS ALA MET LYS SEQRES 21 A 326 MET ILE ARG ASP ASN LEU PRO PRO ARG LEU LYS ASN LEU SEQRES 22 A 326 HIS LYS VAL SER PRO SER LEU LYS GLY PHE LEU ASP ARG SEQRES 23 A 326 LEU LEU VAL ARG ASP PRO ALA GLN ARG ALA THR ALA ALA SEQRES 24 A 326 GLU LEU LEU LYS HIS PRO PHE LEU ALA LYS ALA GLY PRO SEQRES 25 A 326 PRO ALA SER ILE VAL PRO LEU MET ARG GLN ASN ARG THR SEQRES 26 A 326 ARG SEQRES 1 B 24 ALA GLU ASP TRP THR ALA ALA LEU LEU ASN ARG GLY ARG SEQRES 2 B 24 SER ARG GLN PRO LEU VAL LEU GLY ASP ASN CYS MODRES 4XBU SEP A 474 SER MODIFIED RESIDUE HET SEP A 474 10 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 1 SEP C3 H8 N O6 P FORMUL 3 HOH *150(H2 O) HELIX 1 AA1 GLN A 297 VAL A 312 1 16 HELIX 2 AA2 ASP A 316 SER A 319 5 4 HELIX 3 AA3 ARG A 359 GLU A 361 5 3 HELIX 4 AA4 LEU A 362 MET A 370 1 9 HELIX 5 AA5 LEU A 403 THR A 410 1 8 HELIX 6 AA6 ASN A 413 GLN A 434 1 22 HELIX 7 AA7 LYS A 442 ASP A 444 5 3 HELIX 8 AA8 THR A 478 MET A 482 5 5 HELIX 9 AA9 ALA A 483 SER A 488 1 6 HELIX 10 AB1 PRO A 494 GLY A 511 1 18 HELIX 11 AB2 PRO A 519 ASN A 530 1 12 HELIX 12 AB3 ASN A 537 VAL A 541 5 5 HELIX 13 AB4 SER A 542 LEU A 553 1 12 HELIX 14 AB5 THR A 562 LEU A 567 1 6 HELIX 15 AB6 LYS A 568 ALA A 575 5 8 HELIX 16 AB7 PRO A 577 VAL A 582 1 6 HELIX 17 AB8 PRO A 583 ARG A 589 5 7 SHEET 1 AA1 5 LEU A 321 GLU A 329 0 SHEET 2 AA1 5 GLY A 333 VAL A 340 -1 O THR A 339 N ASP A 322 SHEET 3 AA1 5 LEU A 346 ASP A 353 -1 O LYS A 351 N ILE A 334 SHEET 4 AA1 5 GLU A 390 GLU A 396 -1 O MET A 395 N ALA A 348 SHEET 5 AA1 5 MET A 381 VAL A 387 -1 N VAL A 387 O GLU A 390 SHEET 1 AA2 3 GLY A 401 ALA A 402 0 SHEET 2 AA2 3 ILE A 446 LEU A 448 -1 O LEU A 448 N GLY A 401 SHEET 3 AA2 3 VAL A 454 LEU A 456 -1 O LYS A 455 N LEU A 447 SHEET 1 AA3 2 VAL A 436 ILE A 437 0 SHEET 2 AA3 2 ALA A 463 GLN A 464 -1 O ALA A 463 N ILE A 437 SHEET 1 AA4 2 VAL A 476 GLY A 477 0 SHEET 2 AA4 2 LEU B 184 VAL B 185 -1 O LEU B 184 N GLY A 477 LINK C LYS A 473 N SEP A 474 1555 1555 1.34 LINK C SEP A 474 N LEU A 475 1555 1555 1.33 CRYST1 65.620 65.620 184.150 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015239 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015239 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005430 0.00000